View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1332_low_4 (Length: 543)

Name: NF1332_low_4
Description: NF1332
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1332_low_4
NF1332_low_4
[»] chr4 (1 HSPs)
chr4 (30-526)||(25566841-25567336)
[»] chr6 (21 HSPs)
chr6 (77-185)||(5149851-5149959)
chr6 (76-186)||(5092784-5092894)
chr6 (77-380)||(5422050-5422353)
chr6 (109-186)||(5107928-5108005)
chr6 (76-185)||(5160647-5160756)
chr6 (77-185)||(5070566-5070674)
chr6 (73-377)||(5173986-5174290)
chr6 (73-184)||(5272853-5272964)
chr6 (77-186)||(5340401-5340510)
chr6 (236-380)||(5160452-5160596)
chr6 (77-185)||(5358283-5358391)
chr6 (77-185)||(5693072-5693180)
chr6 (77-172)||(5443951-5444046)
chr6 (286-371)||(5275945-5276030)
chr6 (286-371)||(5692886-5692971)
chr6 (82-181)||(5360769-5360868)
chr6 (238-380)||(5092943-5093085)
chr6 (82-140)||(5394196-5394254)
chr6 (225-322)||(5444099-5444196)
chr6 (296-380)||(5070371-5070455)
chr6 (77-161)||(5429446-5429530)
[»] chr2 (1 HSPs)
chr2 (344-388)||(17661082-17661126)


Alignment Details
Target: chr4 (Bit Score: 419; Significance: 0; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 419; E-Value: 0
Query Start/End: Original strand, 30 - 526
Target Start/End: Original strand, 25566841 - 25567336
Alignment:
Q  30 cactgatcgcagatcaaggaagagtccgttgaaagtatttagaagctatgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgca 129  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25566841 cactgattgcagatcaaggaagagtccgttgaaaatatttagaagctatgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgca 25566940  T
Q  130 catctcaatgcttctcttctaaatgctggaatcaacgtttttaaggacgatgattcgatttacaagggtgctcgcatttcaaaatcgctgcctgaagcaa 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25566941 catctcaatgcttctcttctaaatgctggaatcaacgtttttaaggacgatgattcgatttacaagggtgctcgcatttcaaaatcgctgcctgaagcaa 25567040  T
Q  230 tcgaacaatctcgaattgctgcggttgttttttcaaagcattacgcggattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtcatagagc 329  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25567041 tcgaacaatctcgaattgctgtggttgttttttcaaagcattacgcggattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtcatagagc 25567140  T
Q  330 cataaggcagattgttttgcctgttttctatgatgtagatccatcggaagttcgccaccnnnnnnnnnnngtttggtaaagcatttcaaaatcttttaac 429  Q
    ||||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||           |||||||||||||||||||||| |||| ||    
T  25567141 cataaggcagattgttttgccagtgttctatgatgtagatccattggaagttcgccacc-aaaaaaaaaagtttggtaaagcatttcaaaatattttgac 25567239  T
Q  430 tatgctttcaaatcagacgcaaggagaaggacattataaagaagagtcgtcacttcggatgctgagaaggaactggacaactgcacttcgtgaggca 526  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  25567240 tatgctttcaaatcagacgcaaggagaaggacattataaagaagagtcgtcacttcggatgctgagaaggaactggacaaccgcacttcatgaggca 25567336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 9e-19; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 5149959 - 5149851
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 176  Q
    |||||||||||||||||| ||||||||| || || || || || |||||  |||||||| |||||||||||| |||||||||||| || ||||||| |||    
T  5149959 atgaagtgttcttaagttttagaggggaagatacgcgcgcatcattcacttcacatctctatgcttctcttcaaaatgctggaattaaagtttttaggga 5149860  T
Q  177 cgatgattc 185  Q
     ||||||||    
T  5149859 tgatgattc 5149851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 186
Target Start/End: Original strand, 5092784 - 5092894
Alignment:
Q  76 tatgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagg 175  Q
    ||||||||||||||||||| ||||||  | || |||||||| || |||||  |||||||| ||||||| |||| |||||||||||| || ||||||| ||    
T  5092784 tatgaagtgttcttaagttttagaggaaaagatactcgtgcatcattcacttcacatctctatgcttcacttcaaaatgctggaattaatgtttttaggg 5092883  T
Q  176 acgatgattcg 186  Q
    | |||||||||    
T  5092884 atgatgattcg 5092894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 77 - 380
Target Start/End: Original strand, 5422050 - 5422353
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 176  Q
    |||| ||||||||||||| |||||| ||||| |||||||| || |||||  |||||||| |||||||||||| ||||   ||||| || ||||| | |||    
T  5422050 atgatgtgttcttaagttttagaggagaggatactcgtgcatcattcacttcacatctctatgcttctcttcaaaattacggaattaaagttttcaggga 5422149  T
Q  177 cgatgattcgatttacaagggtgctcgcatttcaaaatcgctgcctgaagcaatcgaacaatctcgaattgctgcggttgttttttcaaagcattacgcg 276  Q
    |||||||||| || | |  || | || |||||||| ||| || |    |||||| ||||| ||||||||  ||    | ||||| ||||   ||||||||    
T  5422150 cgatgattcgcttcaaagaggagatcacatttcaacatcactcctacgagcaattgaacagtctcgaatgtctatcatagttttctcaacaaattacgcg 5422249  T
Q  277 gattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtcatagagccataaggcagattgttttgcctgttttctatgatgtagatccatcgg 376  Q
    |||||| |||||||| |  |||||||| |||| |||||| ||||||| ||| ||||  | || |||||| |||| || ||||  || ||||||||||| |    
T  5422250 gattcacaatggtgtcttgatgagttgttgaaaataatggagtgtcacagaaccattggacaaattgttctgccggtgttcttcgacgtagatccatccg 5422349  T
Q  377 aagt 380  Q
    ||||    
T  5422350 aagt 5422353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 186
Target Start/End: Complemental strand, 5108005 - 5107928
Alignment:
Q  109 actcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaaggacgatgattcg 186  Q
    ||||||||||| |||||  |||||||| ||||||||||||  || |||||||||||||||||||  ||||||||||||    
T  5108005 actcgtgcttccttcacttcacatctctatgcttctcttcagaacgctggaatcaacgtttttagagacgatgattcg 5107928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 76 - 185
Target Start/End: Complemental strand, 5160756 - 5160647
Alignment:
Q  76 tatgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagg 175  Q
    ||||||||||||||||||| ||||||  | || |||||||| || |||||  |||||||| ||||| | |||| ||| |||||| | |||||||||| ||    
T  5160756 tatgaagtgttcttaagttttagaggaaaagatactcgtgcatcattcacttcacatctctatgctgcacttcaaaacgctggacttaacgtttttaggg 5160657  T
Q  176 acgatgattc 185  Q
    ||||||||||    
T  5160656 acgatgattc 5160647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 5070674 - 5070566
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 176  Q
    |||| |||||||||||||  ||||| |||||||||||  |||| |||||  |||||||| |||||||||||| |||  |||||||||| ||||||| |||    
T  5070674 atgatgtgttcttaagtttcagaggagaggacactcgctcttcattcacttcacatctctatgcttctcttcgaaactctggaatcaaagtttttaggga 5070575  T
Q  177 cgatgattc 185  Q
     || |||||    
T  5070574 agacgattc 5070566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 73 - 377
Target Start/End: Original strand, 5173986 - 5174290
Alignment:
Q  73 agctatgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgttttta 172  Q
    ||||||||||||||||||||||  ||||| |||||||| ||  |||| |||||  |||| ||  | |||||||||| |||   |||||| | ||||||||    
T  5173986 agctatgaagtgttcttaagtttcagaggcgaggacacgcgcacttcattcacttcacacctatacgcttctcttcaaaacaatggaattagcgttttta 5174085  T
Q  173 aggacgatgattcgatttacaagggtgctcgcatttcaaaatcgctgcctgaagcaatcgaacaatctcgaattgctgcggttgttttttcaaagcatta 272  Q
    |||||||||||||  || | |  || | || |||||||||||| || |   ||||||| ||| | |||| |||| |||   |  |||| |||||  | ||    
T  5174086 aggacgatgattcacttcaaagaggagatcacatttcaaaatcactactacaagcaattgaagagtctcaaatttctgttatcattttctcaaaaaacta 5174185  T
Q  273 cgcggattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtcatagagccataaggcagattgttttgcctgttttctatgatgtagatcca 372  Q
     || ||||||   ||||||||| ||||||||||||| |||||||| ||||  ||| | ||| ||||||| || ||||| || ||||||||||| |||||     
T  5174186 tgcagattcacggtggtgtttggatgagttggtgaaaataatgaaatgtcgcagaactatagggcagatagtgttgccggtgttctatgatgttgatcct 5174285  T
Q  373 tcgga 377  Q
    |||||    
T  5174286 tcgga 5174290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 73 - 184
Target Start/End: Original strand, 5272853 - 5272964
Alignment:
Q  73 agctatgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgttttta 172  Q
    ||||||||||||||||||||||  ||||| |||||||| ||  |||| |||||  |||||||  | |||||||||| |||   |||||| ||||||||||    
T  5272853 agctatgaagtgttcttaagtttcagaggcgaggacacgcgcacttcattcacttcacatctatacgcttctcttcaaaacaatggaattaacgttttta 5272952  T
Q  173 aggacgatgatt 184  Q
    ||||| ||||||    
T  5272953 aggacaatgatt 5272964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 77 - 186
Target Start/End: Original strand, 5340401 - 5340510
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 176  Q
    |||||||||| || |||| ||||||| ||||||||||||  || |||||  |||||||| ||||| | |||| |||||||||||| |  |||||||  ||    
T  5340401 atgaagtgtttttgagttttagagggaaggacactcgtgtatccttcacttcacatctctatgctgcacttcaaaatgctggaattactgtttttagaga 5340500  T
Q  177 cgatgattcg 186  Q
    ||||||||||    
T  5340501 cgatgattcg 5340510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 236 - 380
Target Start/End: Complemental strand, 5160596 - 5160452
Alignment:
Q  236 aatctcgaattgctgcggttgttttttcaaagcattacgcggattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtcatagagccataag 335  Q
    ||||||||||| ||| | ||||||||||||   |||| ||||||||   ||||||| | |||||||| || ||| ||||| |||||||   | ||||| |    
T  5160596 aatctcgaatttctgtgattgttttttcaagaaattatgcggattcgcgatggtgtctaaatgagttagtaaaggtaatggagtgtcagctaaccatagg 5160497  T
Q  336 gcagattgttttgcctgttttctatgatgtagatccatcggaagt 380  Q
    |||||| |||||||| || ||||| ||||||||||| || |||||    
T  5160496 gcagatagttttgccagtgttctacgatgtagatccctctgaagt 5160452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 5358391 - 5358283
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 176  Q
    |||| |||||||| ||||  ||||| |||||||||| |||||  |||||  |||||||| ||||||| |||| ||||   ||||||||||||||||||||    
T  5358391 atgatgtgttcttgagtttcagaggagaggacactcatgcttgcttcacttcacatctctatgcttcccttcaaaatctcggaatcaacgtttttaagga 5358292  T
Q  177 cgatgattc 185  Q
     ||| ||||    
T  5358291 tgatcattc 5358283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 185
Target Start/End: Complemental strand, 5693180 - 5693072
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaagga 176  Q
    |||| ||||||||||||| | ||||||| ||||| ||||||||  ||    |||||||  ||||||||||||||||||||||| |   |||||||| |||    
T  5693180 atgacgtgttcttaagttttcgaggggaagacacccgtgcttcaatcgtttcacatctatatgcttctcttctaaatgctggagttttcgtttttatgga 5693081  T
Q  177 cgatgattc 185  Q
    |||||||||    
T  5693080 cgatgattc 5693072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 77 - 172
Target Start/End: Original strand, 5443951 - 5444046
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgttttta 172  Q
    |||| ||||||||||||| ||||||| | || ||||||||||| |||||  |||||||  ||||| |||||| ||| |||||||| || |||||||    
T  5443951 atgacgtgttcttaagttttagagggaaagatactcgtgcttccttcacttcacatctgtatgctgctcttcaaaaggctggaattaaggttttta 5444046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 5275945 - 5276030
Alignment:
Q  286 tggtgtttgaatgagttggtgaagataatgaagtgtcatagagccataaggcagattgttttgcctgttttctatgatgtagatcc 371  Q
    ||||||||| ||||||||||||| |||||||| ||||  ||| | ||| ||||||| || ||||| || ||||||||||| |||||    
T  5275945 tggtgtttggatgagttggtgaaaataatgaaatgtcgcagaactatagggcagatagtgttgccggtgttctatgatgttgatcc 5276030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 286 - 371
Target Start/End: Complemental strand, 5692971 - 5692886
Alignment:
Q  286 tggtgtttgaatgagttggtgaagataatgaagtgtcatagagccataaggcagattgttttgcctgttttctatgatgtagatcc 371  Q
    |||||||||||||||||||| || |||||| ||||||  ||| | ||| ||||||| || ||||| || ||||||||||| |||||    
T  5692971 tggtgtttgaatgagttggttaaaataatggagtgtcgcagaactatagggcagatagtgttgccggtgttctatgatgttgatcc 5692886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 82 - 181
Target Start/End: Original strand, 5360769 - 5360868
Alignment:
Q  82 gtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaatcaacgtttttaaggacgatg 181  Q
    ||||||||||||| ||| || ||||| |||||| |||| |||||  |||||||| | ||| | |||| ||||| |||||| || |||||||| |||||||    
T  5360769 gtgttcttaagttttaggggagaggatactcgttcttccttcacttcacatctctacgctgcacttcaaaatgttggaattaaagtttttaaagacgatg 5360868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 380
Target Start/End: Original strand, 5092943 - 5093085
Alignment:
Q  238 tctcgaattgctgcggttgttttttcaaagcattacgcggattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtcatagagccataaggc 337  Q
    ||||||||| ||| | ||||||||||||   |||| || |||||   ||||||| |  ||||||| || ||||||||| |||||||  || ||||| |||    
T  5092943 tctcgaatttctgtgattgttttttcaagaaattatgcagattcgcgatggtgtctagatgagttagtaaagataatggagtgtcagcgaaccatagggc 5093042  T
Q  338 agattgttttgcctgttttctatgatgtagatccatcggaagt 380  Q
    |||| ||| |||| || ||||| ||||||||||| || |||||    
T  5093043 agatagttgtgccagtgttctacgatgtagatccctctgaagt 5093085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 5394196 - 5394254
Alignment:
Q  82 gtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgc 140  Q
    |||||||||||||  |||||||||||||||||| |||| |||||  |||||||| ||||    
T  5394196 gtgttcttaagtttcagaggggaggacactcgttcttcattcacttcacatctctatgc 5394254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 322
Target Start/End: Original strand, 5444099 - 5444196
Alignment:
Q  225 agcaatcgaacaatctcgaattgctgcggttgttttttcaaagcattacgcggattcaaaatggtgtttgaatgagttggtgaagataatgaagtgtc 322  Q
    |||||| |||||||||| |||| ||    |||||||||||||  |||| || |||||   ||||||||||||||| |||||||| |||||||| ||||    
T  5444099 agcaattgaacaatctcaaatttctataattgttttttcaaaaaattatgctgattcgcgatggtgtttgaatgaattggtgaaaataatgaattgtc 5444196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 380
Target Start/End: Complemental strand, 5070455 - 5070371
Alignment:
Q  296 atgagttggtgaagataatgaagtgtcatagagccataaggcagattgttttgcctgttttctatgatgtagatccatcggaagt 380  Q
    |||||||||||||||||||| | ||| ||||| ||||  | || |||||| |||| || ||||  || |||||||||||||||||    
T  5070455 atgagttggtgaagataatggaatgtaatagaaccattggacaaattgttctgccagtgttcttagacgtagatccatcggaagt 5070371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 5429446 - 5429530
Alignment:
Q  77 atgaagtgttcttaagttatagaggggaggacactcgtgcttctttcaccgcacatctcaatgcttctcttctaaatgctggaat 161  Q
    |||| |||||| |||||| |||||| || || ||||| |  || |||||  |||||||| |||||||||||| ||||||||||||    
T  5429446 atgacgtgttcctaagttttagaggcgaagatactcgaggatcgttcacttcacatctctatgcttctcttcaaaatgctggaat 5429530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 17661082 - 17661126
Alignment:
Q  344 ttttgcctgttttctatgatgtagatccatcggaagttcgccacc 388  Q
    ||||||||||||| |||||||| ||||||||  ||||||||||||    
T  17661082 ttttgcctgttttttatgatgtcgatccatcacaagttcgccacc 17661126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University