View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13331_high_1 (Length: 645)
Name: NF13331_high_1
Description: NF13331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13331_high_1 |
 | |
|
| [»] scaffold0071 (1 HSPs) |
| | |
|
| [»] scaffold0432 (1 HSPs) |
| | |
|
| [»] scaffold0300 (1 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 460; Significance: 0; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 460; E-Value: 0
Query Start/End: Original strand, 17 - 636
Target Start/End: Original strand, 11467386 - 11468005
Alignment:
| Q |
17 |
attcttgacgaaatcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttgg |
116 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
11467386 |
attcttgacgaaatcctgattgctaatgagttggtggaagaagctaagcgtctgaaaaaagacttgattcttttctaagttgattttgagaaggctttgg |
11467485 |
T |
|
| Q |
117 |
attccattgattggtcctatttggaagcagtcatgnnnnnnn-tgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctg |
215 |
Q |
| |
|
|||| ||||||||||||||| || ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11467486 |
attcaattgattggtcctatatgaaagcagtcatgacaaaaaatgaattttcctatcttatgatgtaagtggattagggaatgcattagcacgacatctg |
11467585 |
T |
|
| Q |
216 |
cttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgacccctatcaccnnnnnnnnnnnnaatagcagct |
315 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| | |
|
|
| T |
11467586 |
cttcagttctagttaatggttactcaacgaatgaattcaaatttgaacgtgggttgaggcaaggtgaccccgatcac-ttttttatttttaatagcagtt |
11467684 |
T |
|
| Q |
316 |
gaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaat |
415 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11467685 |
gaatgcttgaatattatgatgaatgctttagtggaggctgacctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaat |
11467784 |
T |
|
| Q |
416 |
tttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggt |
515 |
Q |
| |
|
||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11467785 |
tttctaatgatactttgttaattggagatcgtagttgggaaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggt |
11467884 |
T |
|
| Q |
516 |
gaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaagatgggccatttacctatc |
615 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
11467885 |
gaacttccacaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaagatgggccatttacttatc |
11467984 |
T |
|
| Q |
616 |
ctctatctggggttgcatatt |
636 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
11467985 |
ctctatctggggttgcatatt |
11468005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 35 - 588
Target Start/End: Original strand, 34547312 - 34547866
Alignment:
| Q |
35 |
attgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcct |
134 |
Q |
| |
|
|||||||||||| | ||||| || |||||||| |||||||||| ||||| | ||| |||| ||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
34547312 |
attgctaatgagattgtggaggaagctaagcgcatgaaaaaagatttgctcttattcaaagtcgattttgagaaggcttttgattccattgattggtcct |
34547411 |
T |
|
| Q |
135 |
atttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatgg |
234 |
Q |
| |
|
| | ||| |||||||| |||| || ||||||||||||||||||||||||| ||||||||| || ||| | | |||| | || |||||||| |
|
|
| T |
34547412 |
accttgaatcagtcatgaaaaaaatgaacttccctaccttatggcgtaagtggattatggaatgcatcagtacggccacaacttctatccttgttaatgg |
34547511 |
T |
|
| Q |
235 |
ttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatg |
333 |
Q |
| |
|
| | |||| ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||| | |||||| | ||| |
|
|
| T |
34547512 |
tagcccaacagatgaattcaaatttgaacgtgggttgagacaaggtgaccctctttcaccctttctatttttaatagcagctgaaggtttgaatgtcatg |
34547611 |
T |
|
| Q |
334 |
atgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgt |
433 |
Q |
| |
|
||||| |||||||| ||| ||| || | | ||| || | || ||| || ||||||| ||| ||| |||||||||||||| |||||| || |||| |
|
|
| T |
34547612 |
atgaaggctttagtagaggttggcctattttctggctacaaggtgggagcaaataatcatgtctccatctctcatttacaatttgatgatgacaccttgt |
34547711 |
T |
|
| Q |
434 |
taattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcat |
533 |
Q |
| |
|
| ||||| || || |||||||| || ||| || || | |||||||||| ||||||| |||| | |||||||| || |||| ||||||| |||||| || |
|
|
| T |
34547712 |
tgattggggaacgaagttgggctaatattcgatctctacaagctttgcttcttctttatgaggcaacatctggtcttaaggaaaacttccacaaaagtat |
34547811 |
T |
|
| Q |
534 |
gctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttctt |
588 |
Q |
| |
|
| |||||| |||||| |||||||||||||||||||| |||| |||||| ||||| |
|
|
| T |
34547812 |
gttagttggtgttaatattcatgactcttggttggctgaggaagcttatgttctt |
34547866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 307 - 596
Target Start/End: Complemental strand, 12690660 - 12690371
Alignment:
| Q |
307 |
atagcagctgaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactc |
406 |
Q |
| |
|
|||||||||||||| || ||| |||||||||| ||||| || |||||| || | |||||| || | | | ||| ||||||| |||| ||||||| |
|
|
| T |
12690660 |
atagcagctgaatggttaaatgttatgatgaaggcttttgtagaggctgacctgttctttggctacaaagttgacgcaaataatcatgtttccatcactc |
12690561 |
T |
|
| Q |
407 |
atttacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctgg |
506 |
Q |
| |
|
|| |||||||| |||||| || ||||| ||||| || || || ||||| || |||| ||| ||||||||| |||| ||||| ||||| ||| ||||| |
|
|
| T |
12690560 |
atctacaatttgttgatgacaccttgttgattggggagcgaagctgggccaatattatagcgttgaaagctctgcttcttctctttgaagtgacttctgg |
12690461 |
T |
|
| Q |
507 |
cctaaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaa |
596 |
Q |
| |
|
|| ||||||||||||| |||||| ||| |||||| |||||| |||||||| ||||||||||| ||||| |||| | ||||| ||||||| |
|
|
| T |
12690460 |
tcttaaggtgaacttccacaaaagtatgttagttggtgttaatattcatgattcttggttggctgaggcagcttctgttcttaattgcaa |
12690371 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 17 - 636
Target Start/End: Complemental strand, 8755085 - 8754465
Alignment:
| Q |
17 |
attcttgacgaaatcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttgg |
116 |
Q |
| |
|
|||||||||| |||| | |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||| || || | |
|
|
| T |
8755085 |
attcttgacggaatcttgattgctaatgagttggtggaagatgctaagcgcctgaaaaaagacttacttctttttaaagttgattttgagaaggcatttg |
8754986 |
T |
|
| Q |
117 |
attccattgattggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgc |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | || | |
|
|
| T |
8754985 |
attcaattgattggtcctatttggaagcagttatgaaaaaaatgaattttcctaccttatggcgtaagtggattaaagaatgcattagcacggcttcggt |
8754886 |
T |
|
| Q |
217 |
ttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtga-cccctatcaccnnnnnnnnnnnnaatagcagct |
315 |
Q |
| |
|
|||||||||||||||||||| |||||||| | ||||||||||||||||| |||||||||||||| ||||||||||| ||||||| || |
|
|
| T |
8754885 |
ttcggttctagttaatggttgtccaacggataatttcaaatttgaacgtggattgaggcaaggtgatcccctatcaccttttttatttttaatagcaact |
8754786 |
T |
|
| Q |
316 |
gaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaat |
415 |
Q |
| |
|
||| ||||||||||||||||||||||||||||| ||||||| ||||| | |||||||| | ||| ||||||| ||||| ||||||||||||||||||| |
|
|
| T |
8754785 |
gaaggcttgaatattatgatgaatgctttagtggaggctggcctttattctggttataacgtgggtgccaatagtcttgcccaaatcactcatttacaat |
8754686 |
T |
|
| Q |
416 |
tttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggt |
515 |
Q |
| |
|
|| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
8754685 |
ttgctgatgataccttgttaattggagatcgtagttgggcaaacattagagctttgaaagctttgctccttctttttgaggcgacgtctggcctaaaggt |
8754586 |
T |
|
| Q |
516 |
gaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaagatgggccatttacctatc |
615 |
Q |
| |
|
||| || | |||||||||||| ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||| | |||||||||| |
|
|
| T |
8754585 |
gaattttcataaaagcatgctaattggtgttaacattcctgactcttggttggccgaggcggcttcccttcttcattgcaagttgggtcgtttacctatc |
8754486 |
T |
|
| Q |
616 |
ctctatctggggttgcatatt |
636 |
Q |
| |
|
|| ||| ||||||||| |||| |
|
|
| T |
8754485 |
ctttatttggggttgcctatt |
8754465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 35 - 593
Target Start/End: Complemental strand, 12914404 - 12913845
Alignment:
| Q |
35 |
attgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcct |
134 |
Q |
| |
|
|||||||||||| | ||||| || |||||||| |||||||||| ||||| | ||| |||||||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
12914404 |
attgctaatgagattgtggaggacgctaagcgcttgaaaaaagatttgctcttattcaaagttgattttgagaaggcttttgattccattgattggtcct |
12914305 |
T |
|
| Q |
135 |
atttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatgg |
234 |
Q |
| |
|
| | ||| | |||||| |||| || ||||||||||||||||||||||||| ||||||||| || ||| | | ||||| | || |||||||| |
|
|
| T |
12914304 |
accttgaatctgtcatgaaaaaaatgaacttccctaccttatggcgtaagtggattatggaatgcatcagtacggccacagcttctatccttgttaatgg |
12914205 |
T |
|
| Q |
235 |
ttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatg |
333 |
Q |
| |
|
| | |||| ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||| | |||||| | ||| |
|
|
| T |
12914204 |
tagcccaacagatgaattcaaatttgaacgtgggttgagacaaggtgaccctctttcaccctttctatttttaatagcagctgaaggtttgaatgtcatg |
12914105 |
T |
|
| Q |
334 |
atgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgt |
433 |
Q |
| |
|
||||| |||||||| ||| ||| || | | ||| || | || ||| || ||||||| ||| ||| |||||||||||||| ||||||| || |||| |
|
|
| T |
12914104 |
atgaaggctttagtagaggttggcctattttctggctacaaggtgggagcaaataatcatgtctccatctctcatttacaatttgctgatgacaccttgt |
12914005 |
T |
|
| Q |
434 |
taattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcat |
533 |
Q |
| |
|
| ||||| || || |||||||| || ||| || || | |||||||||| ||||||| |||| | |||||||| || |||| ||||||| |||||| || |
|
|
| T |
12914004 |
tgattggggaacgaagttgggctaatattcgatctctacaagctttgcttcttctttctgaggcaacatctggtcttaaggcaaacttccacaaaagtat |
12913905 |
T |
|
| Q |
534 |
gctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattg |
593 |
Q |
| |
|
| |||||| |||||| |||||||||||||||||||| ||||| |||| | ||||| |||| |
|
|
| T |
12913904 |
gttagttggtgttaatattcatgactcttggttggctgaggcagcttttgttcttaattg |
12913845 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 29 - 571
Target Start/End: Complemental strand, 20617969 - 20617423
Alignment:
| Q |
29 |
atcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgatt |
128 |
Q |
| |
|
||||| |||||||||||| | |||||| |||||||||| || |||||||| ||||| | ||| |||||||||||||||| |||| || || ||||||| |
|
|
| T |
20617969 |
atcctcattgctaatgagattgtggaaaatgctaagcgcctaaaaaaagatttgctcttattcaaagttgattttgagaagacttttgactcaattgatt |
20617870 |
T |
|
| Q |
129 |
ggtcctatttggaagcagtcatgnnnnnnn-tgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctag |
227 |
Q |
| |
|
||| ||| | |||||||| ||| |||||||| | || ||||||||||||||||||| ||||||| |||| ||| | || | || ||||| | |
|
|
| T |
20617869 |
ggttctaccttgaagcagttatgaaaaaaaatgaatttttcaacattatggcgtaagtggattatggaatgcgttagtacggcctcaacatctgttcttg |
20617770 |
T |
|
| Q |
228 |
ttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaa |
326 |
Q |
| |
|
||||||| | || | |||| ||||||||||||||| |||||||||||||||||||| || || || |||||| | || | | | ||| |
|
|
| T |
20617769 |
ttaatggcagcccatctgatggattcaaatttgaacgggggttgaggcaaggtgaccctctttctccctttctttttttaatagccggtgtaggttagaa |
20617670 |
T |
|
| Q |
327 |
tattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataat---cttgttcaaatcactcatttacaattttctgat |
423 |
Q |
| |
|
| | ||||||||||||||||| ||||||| |||| | |||||| | || ||| || |||||| ||| || ||||||||||||||||||| ||||| |
|
|
| T |
20617669 |
tgtcatgatgaatgctttagtagaggctggacttttttctggttacaaggtggg-gctaataataatcttctttcaatcactcatttacaatttgctgat |
20617571 |
T |
|
| Q |
424 |
gatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcc |
523 |
Q |
| |
|
|| || || |||||||| || || || ||||| || ||||||||| |||||||| | ||| |||| ||||| |||| |||||| || || |||||||||| |
|
|
| T |
20617570 |
gacaccttattaattggggatcgaagctgggctaatattagagctctgaaagctcttctcattctctttgaaacgagatctggtcttaaagtgaacttcc |
20617471 |
T |
|
| Q |
524 |
tcaaaagcatgctagttgatgttaacattcatgactcttggttggccg |
571 |
Q |
| |
|
|||||| ||| |||||| |||||| |||||| | ||||||||||||| |
|
|
| T |
20617470 |
acaaaagtatgttagttggtgttaatattcattattcttggttggccg |
20617423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 400 - 593
Target Start/End: Original strand, 12061715 - 12061908
Alignment:
| Q |
400 |
atcactcatttacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacga |
499 |
Q |
| |
|
|||||||||||||||||| || |||| || || |||||||| || || || ||||| || ||||||||| |||||||| | ||| |||| ||||| |||| |
|
|
| T |
12061715 |
atcactcatttacaatttgctaatgacaccttattaattggggatcgaagctgggctaatattagagctctgaaagctcttctcattctctttgaaacga |
12061814 |
T |
|
| Q |
500 |
catctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattg |
593 |
Q |
| |
|
||||||| || || |||||||||| |||||| ||| |||||| |||||| |||||||||||||||||||||| ||| || | | |||||||||| |
|
|
| T |
12061815 |
catctggtctcaaagtgaacttccacaaaagtatgttagttggtgttaatattcatgactcttggttggccgtggcagcctctattcttcattg |
12061908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 29 - 285
Target Start/End: Original strand, 12061341 - 12061597
Alignment:
| Q |
29 |
atcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgatt |
128 |
Q |
| |
|
||||| |||||||||||| | |||||| |||||||||| || |||||||| ||||| | ||| |||||||||||||||| |||| || || ||||||| |
|
|
| T |
12061341 |
atcctcattgctaatgagattgtggaaaatgctaagcgcctaaaaaaagatttgctcttattcaaagttgattttgagaagacttttgactcaattgatt |
12061440 |
T |
|
| Q |
129 |
ggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagt |
228 |
Q |
| |
|
||| ||| | |||||||| ||| |||||||||| || ||||||||||||||||||| ||||||| | || || | || | | ||||| || |
|
|
| T |
12061441 |
ggttctaccttgaagcagttatgaaaaaaatgaattttccaacattatggcgtaagtggattatggaatgcgtcagtacagcctcaacatatgttcttgt |
12061540 |
T |
|
| Q |
229 |
taatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc |
285 |
Q |
| |
|
|||||| | || | |||| ||||||||||||||| |||||||||||||||||||| |
|
|
| T |
12061541 |
taatggcagcccatctgatggattcaaatttgaacgggggttgaggcaaggtgaccc |
12061597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 171; Significance: 2e-91; HSPs: 4)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 35 - 593
Target Start/End: Complemental strand, 18306913 - 18306354
Alignment:
| Q |
35 |
attgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcct |
134 |
Q |
| |
|
||||||||||||||||| || |||| ||||||||||||||| ||||||||||| ||| | || || |||||||| ||||| ||||| ||||||||| || |
|
|
| T |
18306913 |
attgctaatgagttggtagaggatggtaagcgtctgaaaaaggacttgcttctcttcaaggtcgactttgagaaggcttttgattctattgattggatct |
18306814 |
T |
|
| Q |
135 |
atttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatgg |
234 |
Q |
| |
|
|| | |||||||| ||| |||||||||| |||||||| || |||||||||| |||||||||||| || | ||||||||||||||||||||||| |
|
|
| T |
18306813 |
atcttgaagcagttatgagaaaaatgaattttcccaccttatgacgcaagtggattatggaatgcattagtacagcttctgcttcggttctagttaatgg |
18306714 |
T |
|
| Q |
235 |
ttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatg |
333 |
Q |
| |
|
|| | |||| |||||||||||||||||| | |||||||||||||| ||||| || ||||| ||||||||||||| | |||||| ||||| |
|
|
| T |
18306713 |
ttgcccaacagatgaattcaaatttgaatgggggttgaggcaaggagacccgctttcaccttttctattcttaatagcagctgaaggtttgaatgttatg |
18306614 |
T |
|
| Q |
334 |
atgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgt |
433 |
Q |
| |
|
|||||| |||||| ||||||| |||| || |||||||| || |||| ||||| ||| || ||||||||||| |||||| ||||||| || |||| |
|
|
| T |
18306613 |
atgaattatttagtagaggctggccttttctctggttataaggtaggcggtaataaccttctttccatcactcatttgcaatttgctgatgacaccttgt |
18306514 |
T |
|
| Q |
434 |
taattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcat |
533 |
Q |
| |
|
||||||| || ||||| |||||||| ||||||||| |||||||||| |||||||||||||| ||| || || || || |||||||||| ||||| || |
|
|
| T |
18306513 |
taattggggatcgtagctgggcaaatattagagctctgaaagctttactccttctttttgaagagacttcaggtcttaaagtgaacttccacaaaaatat |
18306414 |
T |
|
| Q |
534 |
gctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattg |
593 |
Q |
| |
|
| |||||| ||||||||||||||| ||||||||||| ||||| ||||| ||||| |||| |
|
|
| T |
18306413 |
gttagttggtgttaacattcatgattcttggttggcagaggcaacttatgttcttaattg |
18306354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 35 - 568
Target Start/End: Original strand, 19322172 - 19322706
Alignment:
| Q |
35 |
attgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcct |
134 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| || ||||| ||||| ||| | || || |||||||| ||||| ||||| ||||||||| || |
|
|
| T |
19322172 |
attgctaatgagttggtggaggatgctaagcgtctgaagaaggactttcttctcttcaaggtcgactttgagaaggcttttgattctattgattggatct |
19322271 |
T |
|
| Q |
135 |
atttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatgg |
234 |
Q |
| |
|
|| | |||||||||||| |||||||||| ||||||||||| |||||||||| |||||||||||| || || ||||||||||| ||||||||||| |
|
|
| T |
19322272 |
atcttgaagcagtcatgaaaaaaatgaattttcccaccttatggcgcaagtggattatggaatgcattagtacaacttctgcttcggtactagttaatgg |
19322371 |
T |
|
| Q |
235 |
ttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatg |
333 |
Q |
| |
|
|| | |||| |||||||||||||||||||| |||||||| ||||| ||||| || ||||| ||||||||||||| |||||| ||||| |
|
|
| T |
19322372 |
ttgcccaactgatgaattcaaatttgaacgggggttgagacaaggagacccgctttcaccttttctattcttaatagcagctgaagatttgaatgttatg |
19322471 |
T |
|
| Q |
334 |
atgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgt |
433 |
Q |
| |
|
||||| |||||||| ||||| | |||| || |||||||| || ||| || ||||||||| || || |||||||| ||||| ||||| || |||| |
|
|
| T |
19322472 |
atgaaagctttagtagaggcttgccttttctctggttataaggtgggtgctaataatcttctttccgtctctcatttataatttgtcgatgacaccttgt |
19322571 |
T |
|
| Q |
434 |
taattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcat |
533 |
Q |
| |
|
||||||| || ||||| |||| ||| ||||||||| ||||||||||||||||||||||||| |||| || ||||| || |||||||||| ||| || || |
|
|
| T |
19322572 |
taattggggatcgtagctgggaaaatattagagctctgaaagctttgctccttctttttgaagcgacttcaggccttaaagtgaacttccacaagagtat |
19322671 |
T |
|
| Q |
534 |
gctagttgatgttaacattcatgactcttggttgg |
568 |
Q |
| |
|
| |||||| |||||| |||||||| |||||||||| |
|
|
| T |
19322672 |
gttagttggtgttaatattcatgattcttggttgg |
19322706 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 525 - 627
Target Start/End: Complemental strand, 41769203 - 41769101
Alignment:
| Q |
525 |
caaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaagatgggccatttacctatcctctatctg |
624 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||||||||||| |||| | |||||||||||||||| || |
|
|
| T |
41769203 |
caaaagcatgctagttggtgttaacattcatgacttttggttggtcgaggcggcttcccttcttcattgcaagttgggtcgtttacctatcctctatttg |
41769104 |
T |
|
| Q |
625 |
ggg |
627 |
Q |
| |
|
||| |
|
|
| T |
41769103 |
ggg |
41769101 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 470 - 568
Target Start/End: Complemental strand, 17196373 - 17196275
Alignment:
| Q |
470 |
tgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttgg |
568 |
Q |
| |
|
|||||||| ||| ||||| ||||| ||| |||||| || ||||||||||||| ||||| ||| ||||| |||||| |||||||| |||||||||| |
|
|
| T |
17196373 |
tgaaagctccgcttcttctctttgatgcgatatctggtcttaaggtgaacttccacaaaaatatgttagtttgtgttaatattcatgattcttggttgg |
17196275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 8e-75; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 17 - 596
Target Start/End: Complemental strand, 26371107 - 26370527
Alignment:
| Q |
17 |
attcttgacgaaatcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttgg |
116 |
Q |
| |
|
|||||||||| ||||| |||||||||||| | |||||||||| |||||| || |||||||| ||||| || ||| |||||||||||||||| ||||| | |
|
|
| T |
26371107 |
attcttgacggcatcctcattgctaatgagattgtggaagatgttaagcgcctaaaaaaagatttgctcctattcaaagttgattttgagaaggcttttg |
26371008 |
T |
|
| Q |
117 |
attccattgattggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgc |
216 |
Q |
| |
|
| || |||||||||| ||| |||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||| ||| || | || | |
|
|
| T |
26371007 |
actctattgattggttctacctggaagcagttatgaaaaaaatgaattttccaacattatggcgcaagtggattatggaatgcgtta---cggcctcaac |
26370911 |
T |
|
| Q |
217 |
ttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagct |
315 |
Q |
| |
|
|| ||||| |||||||| | |||| |||||||||||||||||||| |||||||||||||||||||| || || || |||||| ||| |
|
|
| T |
26370910 |
atctgttcttgttaatggcagcccaactgatgaattcaaatttgaacgggggttgaggcaaggtgaccctctttctcccttccttttttcaatagctgct |
26370811 |
T |
|
| Q |
316 |
gaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataat---cttgttcaaatcactcatttac |
412 |
Q |
| |
|
||| | |||||| | ||||||||||||||||| |||||||||||| | |||||| | || ||| | |||||| |||||| ||||||||||||| |
|
|
| T |
26370810 |
gaaggattgaatgtcatgatgaatgctttagtagaggctggtcttttttctggttacaaggtggggactaataataatcttgtttccatcactcatttac |
26370711 |
T |
|
| Q |
413 |
aattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaa |
512 |
Q |
| |
|
||||| ||||||| || ||||||||||| || || |||||||| || ||||||||| |||||||| | ||| |||| ||||| |||||||||| || || |
|
|
| T |
26370710 |
aatttgctgatgacaccttgttaattggggatcgaagttgggctaatattagagctctgaaagctcttctcattctctttgaagcgacatctggtctcaa |
26370611 |
T |
|
| Q |
513 |
ggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaa |
596 |
Q |
| |
|
||||||||||| |||||| ||| |||||| |||||| |||||||| ||||||||||| ||||| || | | ||||||||||||| |
|
|
| T |
26370610 |
ggtgaacttccacaaaagtatgttagttggtgttaatattcatgattcttggttggctgaggcagcctctgttcttcattgcaa |
26370527 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 463 - 580
Target Start/End: Complemental strand, 27157612 - 27157495
Alignment:
| Q |
463 |
agagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactctt |
562 |
Q |
| |
|
||||| || |||||||| || ||||||||| || || |||| || || |||||||| || | ||||| || |||||||||| ||||||||| | |||| |
|
|
| T |
27157612 |
agagcctttaaagctttacttcttctttttaaggcgtcatccggtctcaaggtgaattttcacaaaattattttagttgatgtcaacattcataattctt |
27157513 |
T |
|
| Q |
563 |
ggttggccgaggcggctt |
580 |
Q |
| |
|
||||||| ||||| |||| |
|
|
| T |
27157512 |
ggttggctgaggcagctt |
27157495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 119; Significance: 2e-60; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 35 - 593
Target Start/End: Complemental strand, 13091918 - 13091359
Alignment:
| Q |
35 |
attgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcct |
134 |
Q |
| |
|
|||||||||||| | |||| ||||||||||| ||||||||||| ||||| | ||| |||| ||||||||||| |||| || |||||||||||||||| |
|
|
| T |
13091918 |
attgctaatgagattatggaggatgctaagcgcctgaaaaaagatttgctcttattcaaagtcgattttgagaagacttttgactccattgattggtcct |
13091819 |
T |
|
| Q |
135 |
atttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatgg |
234 |
Q |
| |
|
| | ||| |||||||| |||| || ||||||||||||||||||| ||||| ||||||||| || ||| | | |||| || || |||||||| |
|
|
| T |
13091818 |
accttgaatcagtcatgaaaaaaatgaacttccctaccttatggcgtaagtagattatggaatgcatcagtacggccacaacttctgtccttgttaatgg |
13091719 |
T |
|
| Q |
235 |
ttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatg |
333 |
Q |
| |
|
| | |||| ||||||||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||| | |||||| | ||| |
|
|
| T |
13091718 |
tagcccaacagatgaattcaaatttgaacgtgggttgagacaaggtgaccctctttcaccctttctatttttaatagcagctgaaggtttgaatgtcatg |
13091619 |
T |
|
| Q |
334 |
atgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgt |
433 |
Q |
| |
|
||||| |||||||| ||| ||| || | | ||| || | || ||| || ||||||| ||| ||| |||||||||||||| |||||| || |||| |
|
|
| T |
13091618 |
atgaaggctttagtagaggttggcctattttctggctacaaggtgggagcaaataatcatgtctccatctctcatttacaatttgttgatgacaccttgt |
13091519 |
T |
|
| Q |
434 |
taattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcat |
533 |
Q |
| |
|
| ||||| || || |||||||| || ||| || || || |||||||||| |||||||||||| | |||||||| || ||||| ||||||| |||||| || |
|
|
| T |
13091518 |
tgattggggaacgaagttgggctaatattcgatctctgcaagctttgcttcttctttttgaggcaacatctggtcttaaggtaaacttccacaaaagtat |
13091419 |
T |
|
| Q |
534 |
gctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattg |
593 |
Q |
| |
|
| |||||| |||||| |||||||||||||||||||| ||||| |||| | ||||| |||| |
|
|
| T |
13091418 |
gttagttggtgttaatattcatgactcttggttggctgaggcagcttctgttcttaattg |
13091359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 17 - 494
Target Start/End: Complemental strand, 25585964 - 25585480
Alignment:
| Q |
17 |
attcttgacgaaatcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttgg |
116 |
Q |
| |
|
|||||||||| ||||| |||||||||||| | ||||||||||||||||| || |||||||| ||||| || ||| |||||||||||||||| ||||| | |
|
|
| T |
25585964 |
attcttgacggcatcctcattgctaatgagattgtggaagatgctaagcgcctaaaaaaagatttgctcctattcaaagttgattttgagaaggcttttg |
25585865 |
T |
|
| Q |
117 |
attccattgattggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgc |
216 |
Q |
| |
|
| || |||||||||| |||| |||||||||| ||| |||||||||| || |||||||| |||||||||| ||||||| | || ||| || || |
|
|
| T |
25585864 |
actctattgattggttctatctggaagcagttatgaaaaaaatgaattttccaacattatggcgaaagtggattatggaatgcgtcagtacggtctcagc |
25585765 |
T |
|
| Q |
217 |
ttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagct |
315 |
Q |
| |
|
|| ||||| |||||||| | |||| |||||||||||||||||||| |||||||||||||||||||| || || || |||||| ||| |
|
|
| T |
25585764 |
atctgttcttgttaatggcagcccaactgatgaattcaaatttgaacgggggttgaggcaaggtgaccctctttctcccttcctttttttaatagctgct |
25585665 |
T |
|
| Q |
316 |
gaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgcca------ataatcttgttcaaatcactcatt |
409 |
Q |
| |
|
||| | |||||| | ||||||||||||||||| |||||||||||| | ||| || | || ||| | | ||||||||||| |||||||||| |
|
|
| T |
25585664 |
gaaggattgaatgtcatgatgaatgctttagtagaggctggtcttttttctggctacaaggtggggactaataatcataatcttgtttccatcactcatt |
25585565 |
T |
|
| Q |
410 |
tacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttga |
494 |
Q |
| |
|
|||||||| ||||||| || ||||||||||| || || |||||||| || ||||||||| |||||||| | ||| |||| ||||| |
|
|
| T |
25585564 |
tacaatttgctgatgacaccttgttaattggggatcgaagttgggctaatattagagctctgaaagctcttctcattctctttga |
25585480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 117; Significance: 3e-59; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 38 - 536
Target Start/End: Original strand, 24092389 - 24092892
Alignment:
| Q |
38 |
gctaatgagttggtggaagatgctaagcgtctgaaaaaa--gacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtccta |
135 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||| ||||| || ||||| || ||| | || ||||||||||| ||||| |||||| |||||||||| || |
|
|
| T |
24092389 |
gctaatgagattgtggaagatgctaagcgcctggaaaaaaggatttgctcctattcaaggtggattttgagaaggcttttgattccgttgattggtctta |
24092488 |
T |
|
| Q |
136 |
tttggaagcagtcatgnnnnnnn--tgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatg |
233 |
Q |
| |
|
| |||||||| ||| |||||||||||||||||||||||||||| |||| ||||||| | || ||| | || | || ||||| ||||||| |
|
|
| T |
24092489 |
ccttgaagcagttatgaaaaaaaaatgaattttcctaccttatggcgtaagtgtattatggaatgcgtcagtacggcctcaacatcagttcttgttaatg |
24092588 |
T |
|
| Q |
234 |
gttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattat |
332 |
Q |
| |
|
| | | |||| |||||||||||||||||| |||||||||||| ||||||| || ||||| ||||||||||||| | |||||| | || |
|
|
| T |
24092589 |
gctgcccaactgatgaattcaaatttgaataggggttgaggcaaagtgaccctctttcaccttttctatttttaatagcagctgaaggattgaatgtcat |
24092688 |
T |
|
| Q |
333 |
gatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttg |
432 |
Q |
| |
|
||||||||||||||| ||| || ||| || |||||| | || |||||| ||||||| | || ||||||||||||||||||| ||||||| |||||| |
|
|
| T |
24092689 |
gatgaatgctttagtagaggttgactttttctctggttacaaggtgggcgctaataatcatatttcaatcactcatttacaatttgctgatgacactttg |
24092788 |
T |
|
| Q |
433 |
ttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagca |
532 |
Q |
| |
|
|||||||| || ||||||||||| || ||||||||| ||||| |||||||| |||| |||||| |||||||||| || || |||||||||| |||||| | |
|
|
| T |
24092789 |
ttaattggggatcgtagttgggctaatattagagctctgaaaactttgctcattctctttgaggcgacatctggtcttaaagtgaacttccacaaaagta |
24092888 |
T |
|
| Q |
533 |
tgct |
536 |
Q |
| |
|
|||| |
|
|
| T |
24092889 |
tgct |
24092892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 245 - 285
Target Start/End: Original strand, 18807853 - 18807893
Alignment:
| Q |
245 |
gatgaattcaaatttgaacgtgggttgaggcaaggtgaccc |
285 |
Q |
| |
|
||||||||||||||||||| ||| ||||| ||||||||||| |
|
|
| T |
18807853 |
gatgaattcaaatttgaacatggtttgagacaaggtgaccc |
18807893 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 111; Significance: 1e-55; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 29 - 593
Target Start/End: Original strand, 48638665 - 48639234
Alignment:
| Q |
29 |
atcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgatt |
128 |
Q |
| |
|
||||| |||||||||||| | ||||||||||||||||| || |||||| | |||| | ||| |||||||||||||||| ||||| || || ||||||| |
|
|
| T |
48638665 |
atcctcattgctaatgagattgtggaagatgctaagcgcctaaaaaaatatctgctcgtattcaaagttgattttgagaaggcttttgactcaattgatt |
48638764 |
T |
|
| Q |
129 |
ggtcctatttggaagcagtcatgnnnnnnn-tgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctag |
227 |
Q |
| |
|
||| ||| | |||||||| ||| |||||||||| || |||||||| |||||||||| ||||||| | | ||| | | || || ||||| | |
|
|
| T |
48638765 |
ggttctaccttgaagcagttatgaaaaaaaatgaattttccaacattatggcgcaagtggattatggaatgcgtcaatacggccttagcatctgttcttg |
48638864 |
T |
|
| Q |
228 |
ttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaa |
326 |
Q |
| |
|
||||||| || |||| |||||||||||||||||||| |||||||||||||||||||| || || || |||||| ||||| | ||||| |
|
|
| T |
48638865 |
ttaatggcaacccaactgatgaattcaaatttgaacgggggttgaggcaaggtgacccactttctccctttctttttttaatagctactgaaggattgaa |
48638964 |
T |
|
| Q |
327 |
tattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaata---atcttgttcaaatcactcatttacaattttctgat |
423 |
Q |
| |
|
| | ||||||||||||||||| ||||||| |||| | |||||| | || ||| || |||| |||||||| |||||||||||||||||| |||| |
|
|
| T |
48638965 |
tgtcatgatgaatgctttagtagaggctggacttttttctggttacaaggtgggggctaataataatcttgtttccatcactcatttacaatttgttgat |
48639064 |
T |
|
| Q |
424 |
gatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcc |
523 |
Q |
| |
|
|| || ||||||||||| || || || ||||| || ||||||||| |||||||| | ||| |||| ||||| |||||||||| || || |||||||||| |
|
|
| T |
48639065 |
gacaccttgttaattggggatcgaagctgggctaatattagagctctgaaagctcttctcattctctttgaagcgacatctggtctcaaagtgaacttcc |
48639164 |
T |
|
| Q |
524 |
tcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattg |
593 |
Q |
| |
|
|||||||||| |||||| |||||| |||||||| ||||||||||| ||||| || | | |||||||||| |
|
|
| T |
48639165 |
acaaaagcatgttagttggtgttaatattcatgattcttggttggctgaggcagcctctgttcttcattg |
48639234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 38 - 596
Target Start/End: Original strand, 43497256 - 43497816
Alignment:
| Q |
38 |
gctaatgagttggtggaagatgctaagcgtctgaaaaaa-gacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcctat |
136 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||| || ||||| | ||| | |||||||||||||| | || ||||||||| ||||||| || |
|
|
| T |
43497256 |
gctaatgagattgtggaagatgctaagcgcctgaaaaaaagatttgctcttattcaaggttgattttgagaagacctttgattccattaattggtcatac |
43497355 |
T |
|
| Q |
137 |
ttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatggtt |
236 |
Q |
| |
|
| ||||| |||||| ||||||||||||| ||||||||||||||||||| |||||| | | || | || ||||| ||||| ||||||||| |
|
|
| T |
43497356 |
cttgaagctgtcatgaaaaaaatgaattttcctacattatggcgtaagtggattatggaatgtgtcaatacagcctcagcttctgttcttgttaatggta |
43497455 |
T |
|
| Q |
237 |
actcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatgat |
335 |
Q |
| |
|
| |||| |||||||||||| ||||||| |||||||| ||||||| ||| || ||||| ||||||||||||| | || ||| ||||||| |
|
|
| T |
43497456 |
gcccaacagatgaattcaaacttgaacgagggttgagacaaggtggccctctttcaccttttctattttaaatagcagctgaagggttaaatgttatgat |
43497555 |
T |
|
| Q |
336 |
gaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgtta |
435 |
Q |
| |
|
||| ||| | || ||| ||| || | || ||| || | || ||||| ||||||| | || ||||||||| | |||||| ||||||| || ||||| |
|
|
| T |
43497556 |
gaaggctcttgtagaggttggcctattctctggctacaaggttggcgcaaataatcctatttccatcactcatcttcaatttgctgatgacaccttgttg |
43497655 |
T |
|
| Q |
436 |
attggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcatgc |
535 |
Q |
| |
|
||||| || || || ||||| || |||||||| ||||||||| |||| ||||| ||||| ||| ||||| || | ||||||||||| |||||| ||| |
|
|
| T |
43497656 |
attggggagcgaagctgggccaatattagagcgttgaaagctctgcttcttctctttgaagtgacttctggtcttatggtgaacttccacaaaagtatgt |
43497755 |
T |
|
| Q |
536 |
tagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaa |
596 |
Q |
| |
|
|||||| |||||| |||||||| |||||||||| ||||| |||| | ||||| ||||||| |
|
|
| T |
43497756 |
tagttggtgttaatattcatgattcttggttggttgaggcagcttctgttcttaattgcaa |
43497816 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 50 - 285
Target Start/End: Complemental strand, 9898636 - 9898401
Alignment:
| Q |
50 |
gtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcctatttggaagcagtca |
149 |
Q |
| |
|
||||||||||||||| | ||||||||||| || || | ||| | |||||||| ||||| ||||| |||||||||||||||||||| | ||||| |||| |
|
|
| T |
9898636 |
gtggaagatgctaagagcctgaaaaaagattttctcttattcaaggttgatttagagaaggcttttgattccattgattggtcctaccttgaagctgtca |
9898537 |
T |
|
| Q |
150 |
tgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatggttactcaacggatga |
249 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||| ||||||| | || ||| | || |||| |||| ||||||||| | |||| ||||| |
|
|
| T |
9898536 |
tgaaaaaaatgaattttcctaccttatggcgtaagtggattatggaatgcgtcagtacggcctcaacttctattctggttaatggtatcccaacagatga |
9898437 |
T |
|
| Q |
250 |
attcaaatttgaacgtgggttgaggcaaggtgaccc |
285 |
Q |
| |
|
|||| |||||||||| ||||||| |||||||||| |
|
|
| T |
9898436 |
attcgaatttgaacgggggttgatataaggtgaccc |
9898401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 215 - 580
Target Start/End: Complemental strand, 36653604 - 36653238
Alignment:
| Q |
215 |
gcttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcag |
313 |
Q |
| |
|
||||| ||||| ||||||||| | |||| |||||||||||| |||||| ||||||||| ||||||||||| || ||||| |||||||| |
|
|
| T |
36653604 |
gcttctgttcttgttaatggtagcccaacagatgaattcaaacttgaacatgggttgagacaaggtgaccctctttcaccttttctatttttaatagcag |
36653505 |
T |
|
| Q |
314 |
ctgaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttaca |
413 |
Q |
| |
|
||||| | || ||| | |||||||| ||| | || ||| |||||| | || | | || | || ||||| ||||||| |||| ||||||||| |||| |
|
|
| T |
36653504 |
ctgaagggttaaatgtcatgatgaaggctcttgtagaggatggtctgttctctagctacaaggttggcgcaaataatcatgttttcatcactcatctaca |
36653405 |
T |
|
| Q |
414 |
attttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaag |
513 |
Q |
| |
|
|||| |||||| || ||||| ||||| || || || ||||| || |||||||| ||||||||| |||| ||||| ||||| ||||||||| || ||| |
|
|
| T |
36653404 |
atttgatgatgacaccttgttgattggggagcgaagctgggccaatattagagcgttgaaagctctgcttcttctctttgaagtgacatctggtcttaag |
36653305 |
T |
|
| Q |
514 |
gtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggctt |
580 |
Q |
| |
|
||||||||| |||||| ||| |||||| |||||| |||||||| ||||||||||| ||||| |||| |
|
|
| T |
36653304 |
gtgaacttcaacaaaagtatgttagttggtgttaatattcatgattcttggttggctgaggcagctt |
36653238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 116 - 285
Target Start/End: Complemental strand, 39061692 - 39061523
Alignment:
| Q |
116 |
gattccattgattggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctg |
215 |
Q |
| |
|
|||||||||||||||||||| | |||| |||||| ||||||||||||||||||||||||||||||||| ||||||| | || ||| | || |
|
|
| T |
39061692 |
gattccattgattggtcctaccttgaagttgtcatgaaaaaaatgaattttcctaccttatggcgtaagtggattaaggaatgcgtcagtacggcctcaa |
39061593 |
T |
|
| Q |
216 |
cttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc |
285 |
Q |
| |
|
|||| ||||| ||||||||| | |||| |||||||||||||||||| | |||||||| ||||||||||| |
|
|
| T |
39061592 |
cttctgttctggttaatggtagcccaacagatgaattcaaatttgaaagggggttgagacaaggtgaccc |
39061523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 36654993 - 36654833
Alignment:
| Q |
38 |
gctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcctatt |
137 |
Q |
| |
|
||||||||| | |||| ||||| |||||| ||||||||||| ||| | ||||| | |||||||||||||| || || ||||||||| ||||||| || |
|
|
| T |
36654993 |
gctaatgagattgtgggagatgttaagcgcctgaaaaaagatttgttcattttcaaggttgattttgagaaggcctttgattccattaattggtcatacc |
36654894 |
T |
|
| Q |
138 |
tggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatg |
198 |
Q |
| |
|
| ||||| |||||| |||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
36654893 |
ttgaagctgtcatgaaaaaaatgaattttcctaccttatggagtaagtggattatggaatg |
36654833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 400 - 575
Target Start/End: Complemental strand, 9898285 - 9898110
Alignment:
| Q |
400 |
atcactcatttacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacga |
499 |
Q |
| |
|
||||||||| | |||||| |||||| || || || ||||| || || || ||||| || ||||||||| |||||||| | || |||| |||||| || |
|
|
| T |
9898285 |
atcactcatcttcaatttgttgatgacaccttattgattggggagcgaagctgggccaatattagagctctgaaagctcttcttattctctttgaggtga |
9898186 |
T |
|
| Q |
500 |
catctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggc |
575 |
Q |
| |
|
||||||| || ||||||||||||| | |||| ||| |||||| |||||| |||||||| ||||||||||| ||||| |
|
|
| T |
9898185 |
catctggtcttaaggtgaacttccacgaaagtatgttagttggtgttaatattcatgattcttggttggcagaggc |
9898110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 575
Target Start/End: Complemental strand, 39061335 - 39061271
Alignment:
| Q |
511 |
aaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggc |
575 |
Q |
| |
|
||||||||||||| |||||| ||| |||||| |||||| |||||||| ||||||||||| ||||| |
|
|
| T |
39061335 |
aaggtgaacttccacaaaagtatgttagttggtgttaatattcatgattcttggttggcagaggc |
39061271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 98; Significance: 6e-48; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 17 - 593
Target Start/End: Complemental strand, 17915276 - 17914696
Alignment:
| Q |
17 |
attcttgacgaaatcctaattgctaatgagttggtggaagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttgg |
116 |
Q |
| |
|
|||||||||| ||||| |||||||||||| | ||||||||||||||||| || |||||||| ||||| | ||| |||||||||||||||| ||||| | |
|
|
| T |
17915276 |
attcttgacggcatcctcattgctaatgagattgtggaagatgctaagcgactaaaaaaagatttgctcttattcaaagttgattttgagaaggcttttg |
17915177 |
T |
|
| Q |
117 |
attccattgattggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgc |
216 |
Q |
| |
|
| || |||||||||| ||| | |||||||| ||| |||||||||| || |||||||| |||||||||| |||||| | || ||| | || || |
|
|
| T |
17915176 |
actcaattgattggttctaccttgaagcagttatgaaaaaaatgaattttccaacattatggcgcaagtggattatcgaatgcgtcagtacggcctcagc |
17915077 |
T |
|
| Q |
217 |
ttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatcaccnnnnnnnnnnnnaatagcagct |
315 |
Q |
| |
|
|| ||||| |||||||| | |||| |||||||||||||||||||| || |||||| |||||||||| || || || |||||| || |
|
|
| T |
17915076 |
atctgttcttgttaatggcagcccaacagatgaattcaaatttgaacggggattgaggtaaggtgaccctctttctccctttctttttttaatagccgcg |
17914977 |
T |
|
| Q |
316 |
gaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgc---caataatcttgttcaaatcactcatttac |
412 |
Q |
| |
|
||| | |||||| | |||| |||||||||||| ||||| | ||| | |||||| | || ||| || |||||||||||| ||||||||||||| |
|
|
| T |
17914976 |
gaaggattgaatgtcatgacgaatgctttagtagaggctagagttttttctggttacaaggtgggggctaataataatcttgtttccatcactcatttac |
17914877 |
T |
|
| Q |
413 |
aattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaa |
512 |
Q |
| |
|
||||| ||||||| || ||||||||||| | || || ||||| || ||||||||| ||||| || | ||| |||| ||||| |||||||||| || || |
|
|
| T |
17914876 |
aatttgctgatgacaccttgttaattgggaatcgaagctgggctaatattagagctctgaaaactcttctcattctctttgaagcgacatctggtctcaa |
17914777 |
T |
|
| Q |
513 |
ggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattg |
593 |
Q |
| |
|
|||||||||| |||||| ||| |||||| ||||| |||||||| ||||||||||| ||||| || | | |||||||||| |
|
|
| T |
17914776 |
agtgaacttccacaaaagtatgttagttggcgttaatattcatgattcttggttggctgaggcagcctctattcttcattg |
17914696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 575
Target Start/End: Original strand, 15028089 - 15028575
Alignment:
| Q |
93 |
aagttgattttgagaatgctttggattccattgattggtcctatttggaagcagtcatgnnnnnnntgaattttcctaccttatggcgtaagtggattag |
192 |
Q |
| |
|
||||||||||| |||| ||||| || || |||||||||| ||| | |||| ||| ||| |||||||||| ||||||||||||||||||||| |
|
|
| T |
15028089 |
aagttgattttaagaaggcttttgactcaattgattggttctaccttgaagtagtaatgaaaaaaatgaattttccatccttatggcgtaagtggattat |
15028188 |
T |
|
| Q |
193 |
ggaatgcattagcacgacatctgcttcggttctagttaatggttactcaacggatgaattcaaatttgaacgtgggttgaggcaaggtgaccc-ctatca |
291 |
Q |
| |
|
||||||||| || ||| | || | || ||||| |||||| | | |||| |||||||||||||||||||| |||||||||||||| ||||| || || |
|
|
| T |
15028189 |
ggaatgcatcagtacggcctcaggatctgttcttgttaatcgcatcccaactgatgaattcaaatttgaacgagggttgaggcaaggggaccctctttct |
15028288 |
T |
|
| Q |
292 |
ccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatgatgaatgctttagtgaaggctggtctttactttggttatacggagggcgccaata--- |
388 |
Q |
| |
|
|| || ||| |||||| | || ||| | ||||||||||||||||| ||||||| || | | |||||| | || |||||| |||| |
|
|
| T |
15028289 |
ccctttctttttttaaaagctgctgaaggattaaatttcatgatgaatgctttagtagaggctggactattttctggttacaaggtgggcgctaataata |
15028388 |
T |
|
| Q |
389 |
atcttgttcaaatcactcatttacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttct |
488 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||| || ||||||||||| || || |||||||| || |||||||||||||||||| | |||||||| |
|
|
| T |
15028389 |
atcttgtttccatcactcatttacaatttgttgatgacaccttgttaattggggatcgaagttgggctaatattagagctttgaaagctattctccttct |
15028488 |
T |
|
| Q |
489 |
ttttgagacgacatctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggc |
575 |
Q |
| |
|
||||| |||| ||||| || || || ||||||| ||||| ||| |||| | |||||| |||||||| ||||||||||||||||| |
|
|
| T |
15028489 |
ctttgaagcgacttctggtctcaaagttaacttccacaaaaatatgttagtaggtgttaatattcatgattcttggttggccgaggc |
15028575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 54 - 568
Target Start/End: Complemental strand, 15425789 - 15425274
Alignment:
| Q |
54 |
aagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcctatttggaagcagtcatgnn |
153 |
Q |
| |
|
||||||||||||| |||||||||| ||||| | ||| | |||||||||||||| || || ||||||||| ||||||| || | ||||| |||||| |
|
|
| T |
15425789 |
aagatgctaagcgcttgaaaaaagatttgctcttattcaaggttgattttgagaaggcctttgattccattaattggtcataccttgaagctgtcatgaa |
15425690 |
T |
|
| Q |
154 |
nnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatggttactcaacggatgaattc |
253 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||| | || || | || |||| ||||| ||||||||| | |||| ||||||||| |
|
|
| T |
15425689 |
aaaaatgaattatcctaccttatggcgtaagtggattatggaatgtgtcagtacagcctcaacttctgttcttgttaatggtagcccaacagatgaattc |
15425590 |
T |
|
| Q |
254 |
aaatttgaacgtgggttgaggcaaggtgacccctat-caccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatgatgaatgctttagtgaagg |
352 |
Q |
| |
|
||| ||||||| |||||||| ||||||||||| | | |||| ||||||||||||| | || ||| |||||||||| ||| | | ||| |
|
|
| T |
15425589 |
aaacttgaacgagggttgagacaaggtgaccctttttcaccttttctatttttaatagcagctgaagggttaaatgttatgatgaaggctcttatagagg |
15425490 |
T |
|
| Q |
353 |
ctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgttaattggagaccgtagttg |
452 |
Q |
| |
|
|||| || | || ||| || | || ||||| ||||||| |||| |||||| || |||||||| ||||||| || ||||| ||||| || || || || |
|
|
| T |
15425489 |
ctggcctgttctctggctacaaggttggcgcaaataatcctgtttccatcacttatctacaatttgctgatgacaccttgttgattggggagcgaagctg |
15425390 |
T |
|
| Q |
453 |
ggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacatt |
552 |
Q |
| |
|
||| || |||||||| ||||||||| |||| ||||| ||||| ||| ||||| || ||||||||||||| ||||| ||| |||||| |||||| ||| |
|
|
| T |
15425389 |
ggccaatattagagcgttgaaagctctgcttcttctctttgaagtgacttctggtcttaaggtgaacttccacaaaaatatgttagttggtgttaatatt |
15425290 |
T |
|
| Q |
553 |
catgactcttggttgg |
568 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
15425289 |
catgattcttggttgg |
15425274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0071 (Bit Score: 83; Significance: 5e-39; HSPs: 1)
Name: scaffold0071
Description:
Target: scaffold0071; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 54 - 568
Target Start/End: Original strand, 36449 - 36964
Alignment:
| Q |
54 |
aagatgctaagcgtctgaaaaaagacttgcttcttttctaagttgattttgagaatgctttggattccattgattggtcctatttggaagcagtcatgnn |
153 |
Q |
| |
|
||||||||||||| |||||||||| ||||| | ||| | |||||||||||||| || || ||||||||| ||||||| || | ||||| |||||| |
|
|
| T |
36449 |
aagatgctaagcgcttgaaaaaagatttgctcttattcaaggttgattttgagaaggcctttgattccattaattggtcataccttgaagctgtcatgaa |
36548 |
T |
|
| Q |
154 |
nnnnntgaattttcctaccttatggcgtaagtggattagggaatgcattagcacgacatctgcttcggttctagttaatggttactcaacggatgaattc |
253 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |||||| | || || | || |||| ||||| ||||||||| | |||| ||||||||| |
|
|
| T |
36549 |
aaaaatgaattatcctaccttatggcgtaagtggattatggaatgtgtcagtacagcctcaacttctgttcttgttaatggtagcccaacagatgaattc |
36648 |
T |
|
| Q |
254 |
aaatttgaacgtgggttgaggcaaggtgacccctat-caccnnnnnnnnnnnnaatagcagctgaatgcttgaatattatgatgaatgctttagtgaagg |
352 |
Q |
| |
|
||| ||||||| |||||||| ||||||||||| | | |||| ||||||||||||| | || ||| |||||||||| ||| | | ||| |
|
|
| T |
36649 |
aaacttgaacgagggttgagacaaggtgaccctttttcaccttttctatttttaatagcagctgaagggttaaatgttatgatgaaggctcttatagagg |
36748 |
T |
|
| Q |
353 |
ctggtctttactttggttatacggagggcgccaataatcttgttcaaatcactcatttacaattttctgatgatactttgttaattggagaccgtagttg |
452 |
Q |
| |
|
|||| || | || ||| || | || ||||| ||||||| |||| |||||| || |||||||| ||||||| || ||||| ||||| || || || || |
|
|
| T |
36749 |
ctggcctgttctctggctacaaggttggcgcaaataatcctgtttccatcacttatctacaatttgctgatgacaccttgttgattggggagcgaagctg |
36848 |
T |
|
| Q |
453 |
ggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcctaaaggtgaacttcctcaaaagcatgctagttgatgttaacatt |
552 |
Q |
| |
|
||| || |||||||| ||||||||| |||| ||||| ||||| ||| ||||| || ||||||||||||| ||||| ||| |||||| |||||| ||| |
|
|
| T |
36849 |
ggccaatattagagcgttgaaagctctgcttcttctctttgaagtgacttctggtcttaaggtgaacttccacaaaaatatgttagttggtgttaatatt |
36948 |
T |
|
| Q |
553 |
catgactcttggttgg |
568 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
36949 |
catgattcttggttgg |
36964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0432 (Bit Score: 73; Significance: 5e-33; HSPs: 1)
Name: scaffold0432
Description:
Target: scaffold0432; HSP #1
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 400 - 575
Target Start/End: Original strand, 7408 - 7586
Alignment:
| Q |
400 |
atcactcatttacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacga |
499 |
Q |
| |
|
||||||||||| ||||| ||||||| || ||||||||||| || |||||||||||||| |||||||||| ||||||||| |||||||||||||| ||| |
|
|
| T |
7408 |
atcactcatttgcaattagctgatgacaccttgttaattggggatcgtagttgggcaaatattagagcttggaaagctttactccttctttttgaagcga |
7507 |
T |
|
| Q |
500 |
catctggcctaaa---ggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggc |
575 |
Q |
| |
|
| || || || || | ||||||||| |||||| ||| |||||| ||||||||||||||| ||||||||||| ||||| |
|
|
| T |
7508 |
cttcaggtcttaaagtgatgaacttccacaaaagtatgttagttggtgttaacattcatgattcttggttggcagaggc |
7586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0300 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0300
Description:
Target: scaffold0300; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 410 - 596
Target Start/End: Original strand, 7858 - 8044
Alignment:
| Q |
410 |
tacaattttctgatgatactttgttaattggagaccgtagttgggcaaacattagagctttgaaagctttgctccttctttttgagacgacatctggcct |
509 |
Q |
| |
|
|||||||| |||||| || ||||| ||||| || | || ||||| || |||||||| ||||||||| |||| ||||| ||||| ||||||||| || |
|
|
| T |
7858 |
tacaatttgttgatgacaccttgttgattggggagcaaagctgggccaatattagagcgttgaaagctctgcttcttctctttgaagtgacatctggtct |
7957 |
T |
|
| Q |
510 |
aaaggtgaacttcctcaaaagcatgctagttgatgttaacattcatgactcttggttggccgaggcggcttatcttcttcattgcaa |
596 |
Q |
| |
|
||||||||||||| |||||| ||| |||||| |||||| |||||||| ||||||||||| ||||| |||| | ||||| ||||||| |
|
|
| T |
7958 |
taaggtgaacttccacaaaagtatgttagttggtgttaatattcatgattcttggttggctgaggcagcttctgttcttaattgcaa |
8044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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