View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13331_high_8 (Length: 464)

Name: NF13331_high_8
Description: NF13331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13331_high_8
NF13331_high_8
[»] scaffold0809 (2 HSPs)
scaffold0809 (30-280)||(1411-1661)
scaffold0809 (138-212)||(1645-1719)
[»] chr8 (42 HSPs)
chr8 (19-280)||(10108370-10108632)
chr8 (19-282)||(2583318-2583582)
chr8 (19-281)||(14767623-14767883)
chr8 (19-215)||(17623003-17623199)
chr8 (19-280)||(7689524-7689785)
chr8 (19-280)||(21148053-21148314)
chr8 (27-280)||(30789631-30789885)
chr8 (19-280)||(5554869-5555131)
chr8 (19-283)||(14820292-14820556)
chr8 (19-214)||(26136752-26136947)
chr8 (19-202)||(42605832-42606015)
chr8 (27-212)||(42113108-42113293)
chr8 (19-199)||(43851780-43851960)
chr8 (19-200)||(22494466-22494646)
chr8 (35-203)||(43481446-43481614)
chr8 (138-267)||(42112999-42113127)
chr8 (138-280)||(7689758-7689901)
chr8 (19-124)||(26532899-26533004)
chr8 (138-281)||(43851664-43851807)
chr8 (143-280)||(10171383-10171521)
chr8 (397-464)||(17855642-17855709)
chr8 (397-462)||(19733106-19733172)
chr8 (138-215)||(21148003-21148080)
chr8 (138-280)||(10108605-10108748)
chr8 (138-280)||(14820529-14820672)
chr8 (111-214)||(21144713-21144816)
chr8 (141-199)||(17622969-17623027)
chr8 (138-212)||(26136920-26136994)
chr8 (135-267)||(5555101-5555233)
chr8 (138-215)||(14767573-14767650)
chr8 (138-215)||(26532849-26532926)
chr8 (401-464)||(38289270-38289334)
chr8 (398-464)||(32822109-32822175)
chr8 (138-203)||(22494619-22494684)
chr8 (398-464)||(13906661-13906728)
chr8 (398-464)||(41454862-41454929)
chr8 (407-464)||(10621410-10621468)
chr8 (135-200)||(22848399-22848465)
chr8 (398-436)||(44828497-44828535)
chr8 (399-436)||(1032564-1032601)
chr8 (138-203)||(2583555-2583620)
chr8 (409-464)||(19957356-19957412)
[»] chr5 (47 HSPs)
chr5 (19-280)||(14143902-14144163)
chr5 (19-215)||(7126033-7126229)
chr5 (27-280)||(24074303-24074556)
chr5 (19-276)||(31799756-31800013)
chr5 (19-282)||(993863-994125)
chr5 (19-280)||(24837285-24837547)
chr5 (19-202)||(24650816-24650998)
chr5 (19-267)||(29444820-29445068)
chr5 (27-215)||(20709336-20709524)
chr5 (19-280)||(17762283-17762544)
chr5 (27-214)||(6817246-6817432)
chr5 (19-212)||(4919106-4919299)
chr5 (32-286)||(18336461-18336705)
chr5 (19-215)||(41001469-41001665)
chr5 (96-280)||(14411697-14411882)
chr5 (100-214)||(27159154-27159268)
chr5 (138-282)||(23979136-23979281)
chr5 (138-280)||(6817123-6817265)
chr5 (27-141)||(23979042-23979155)
chr5 (53-198)||(22571227-22571372)
chr5 (138-215)||(20709278-20709355)
chr5 (167-281)||(31799639-31799754)
chr5 (138-280)||(30512288-30512430)
chr5 (138-280)||(30552628-30552770)
chr5 (138-275)||(7125923-7126060)
chr5 (19-99)||(14411847-14411928)
chr5 (407-464)||(20191444-20191501)
chr5 (138-280)||(14144136-14144279)
chr5 (142-280)||(24837169-24837308)
chr5 (138-212)||(993816-993890)
chr5 (138-215)||(4919056-4919133)
chr5 (167-282)||(18336720-18336835)
chr5 (138-215)||(24074537-24074614)
chr5 (138-215)||(29445041-29445118)
chr5 (398-462)||(31991798-31991863)
chr5 (138-280)||(17762517-17762660)
chr5 (152-214)||(22571144-22571206)
chr5 (138-203)||(27159068-27159133)
chr5 (138-214)||(14411901-14411977)
chr5 (19-74)||(30512403-30512459)
chr5 (19-74)||(30552743-30552799)
chr5 (414-464)||(34729481-34729532)
chr5 (398-464)||(38503292-38503359)
chr5 (138-268)||(41001369-41001496)
chr5 (19-99)||(27159106-27159185)
chr5 (399-464)||(31250141-31250207)
chr5 (138-215)||(24650766-24650843)
[»] chr1 (59 HSPs)
chr1 (30-280)||(52058138-52058386)
chr1 (19-215)||(4907078-4907274)
chr1 (19-204)||(20995746-20995930)
chr1 (19-215)||(17606374-17606570)
chr1 (19-215)||(43539413-43539609)
chr1 (19-282)||(39826166-39826426)
chr1 (19-280)||(30299232-30299493)
chr1 (27-280)||(24467629-24467881)
chr1 (30-201)||(42510141-42510312)
chr1 (19-215)||(39711138-39711334)
chr1 (27-215)||(48072027-48072215)
chr1 (27-280)||(18462286-18462538)
chr1 (19-282)||(39970762-39971026)
chr1 (19-203)||(33628806-33628990)
chr1 (19-282)||(8292802-8293069)
chr1 (19-198)||(13229815-13229993)
chr1 (51-280)||(29696565-29696793)
chr1 (96-282)||(34749299-34749485)
chr1 (138-282)||(24467862-24468004)
chr1 (138-280)||(39826050-39826193)
chr1 (35-198)||(7473924-7474083)
chr1 (138-282)||(30299466-30299611)
chr1 (138-215)||(52058077-52058154)
chr1 (138-280)||(4906962-4907105)
chr1 (138-214)||(48072196-48072272)
chr1 (19-94)||(34749253-34749328)
chr1 (96-214)||(16294140-16294258)
chr1 (398-464)||(35309718-35309784)
chr1 (138-211)||(7473862-7473935)
chr1 (138-215)||(18462519-18462596)
chr1 (138-280)||(39711307-39711450)
chr1 (138-214)||(42510081-42510157)
chr1 (401-463)||(44583584-44583646)
chr1 (138-215)||(8293042-8293119)
chr1 (138-215)||(20995903-20995980)
chr1 (139-212)||(29696794-29696867)
chr1 (138-215)||(39970712-39970789)
chr1 (409-464)||(19424050-19424106)
chr1 (138-280)||(17606543-17606684)
chr1 (35-124)||(215044-215133)
chr1 (407-463)||(17916709-17916766)
chr1 (138-215)||(34749203-34749280)
chr1 (385-464)||(24134659-24134738)
chr1 (166-280)||(33628690-33628805)
chr1 (397-464)||(34702348-34702416)
chr1 (398-464)||(24253678-24253745)
chr1 (398-464)||(27054683-27054750)
chr1 (398-437)||(39304266-39304305)
chr1 (160-203)||(42510167-42510210)
chr1 (397-436)||(49619964-49620003)
chr1 (407-464)||(22779225-22779283)
chr1 (398-436)||(50011500-50011538)
chr1 (398-436)||(50065003-50065041)
chr1 (140-213)||(17501967-17502040)
chr1 (225-277)||(17606307-17606360)
chr1 (225-281)||(18342339-18342396)
chr1 (138-186)||(13229966-13230014)
chr1 (166-202)||(34749296-34749332)
chr1 (398-430)||(35527571-35527603)
[»] chr4 (63 HSPs)
chr4 (27-277)||(9396702-9396953)
chr4 (19-280)||(46046540-46046801)
chr4 (19-215)||(7819080-7819276)
chr4 (19-212)||(37012823-37013016)
chr4 (19-215)||(3018078-3018274)
chr4 (19-198)||(4355964-4356143)
chr4 (19-284)||(9516726-9516992)
chr4 (19-267)||(38574084-38574332)
chr4 (27-215)||(15640781-15640969)
chr4 (19-280)||(31090177-31090439)
chr4 (19-267)||(9618994-9619241)
chr4 (19-183)||(18667387-18667551)
chr4 (19-215)||(18713026-18713222)
chr4 (19-215)||(34064098-34064294)
chr4 (27-280)||(13132065-13132317)
chr4 (27-203)||(3273700-3273874)
chr4 (19-215)||(31944016-31944212)
chr4 (19-215)||(48579982-48580178)
chr4 (96-212)||(26252337-26252453)
chr4 (96-215)||(35376228-35376344)
chr4 (27-124)||(48259908-48260005)
chr4 (19-99)||(26252418-26252499)
chr4 (138-280)||(38573969-38574111)
chr4 (398-464)||(37574266-37574332)
chr4 (138-215)||(3273855-3273932)
chr4 (138-215)||(15640950-15641027)
chr4 (138-282)||(31090058-31090204)
chr4 (138-215)||(13132007-13132084)
chr4 (138-215)||(37012773-37012850)
chr4 (19-74)||(35376335-35376390)
chr4 (113-212)||(41947066-41947165)
chr4 (399-464)||(38690660-38690726)
chr4 (138-203)||(7819249-7819314)
chr4 (138-215)||(9396934-9397011)
chr4 (138-279)||(9516611-9516753)
chr4 (138-203)||(46046502-46046567)
chr4 (138-215)||(48259986-48260063)
chr4 (138-201)||(18667524-18667587)
chr4 (419-462)||(44251364-44251407)
chr4 (140-214)||(36888917-36888991)
chr4 (138-199)||(4356116-4356177)
chr4 (138-215)||(18713195-18713272)
chr4 (138-215)||(26252472-26252549)
chr4 (166-215)||(34064048-34064097)
chr4 (415-464)||(34974712-34974761)
chr4 (142-203)||(35376367-35376428)
chr4 (142-280)||(9619218-9619357)
chr4 (410-462)||(53758980-53759032)
chr4 (424-464)||(56555568-56555608)
chr4 (175-214)||(36699496-36699535)
chr4 (226-280)||(41946965-41947020)
chr4 (398-464)||(51974740-51974807)
chr4 (138-212)||(31944185-31944259)
chr4 (138-203)||(3018247-3018312)
chr4 (166-203)||(18667471-18667508)
chr4 (399-436)||(40407025-40407062)
chr4 (396-464)||(43362203-43362272)
chr4 (138-215)||(48579932-48580009)
chr4 (225-280)||(12904747-12904803)
chr4 (141-213)||(20069538-20069610)
chr4 (225-280)||(31218303-31218359)
chr4 (225-280)||(46046430-46046486)
chr4 (399-462)||(56087963-56088026)
[»] chr7 (60 HSPs)
chr7 (19-280)||(41600074-41600336)
chr7 (19-203)||(23704739-23704923)
chr7 (19-280)||(12006656-12006918)
chr7 (19-280)||(48672395-48672657)
chr7 (19-280)||(23383616-23383878)
chr7 (19-215)||(20458807-20459003)
chr7 (60-280)||(28218320-28218541)
chr7 (19-215)||(20419652-20419848)
chr7 (32-214)||(20963624-20963805)
chr7 (27-212)||(31851363-31851548)
chr7 (19-196)||(44816951-44817128)
chr7 (19-214)||(38879840-38880035)
chr7 (58-214)||(6465921-6466077)
chr7 (19-215)||(10409440-10409636)
chr7 (19-215)||(1250322-1250518)
chr7 (27-203)||(7658095-7658269)
chr7 (27-178)||(33162638-33162789)
chr7 (96-280)||(25772525-25772709)
chr7 (108-215)||(48648434-48648541)
chr7 (138-283)||(20419533-20419679)
chr7 (19-99)||(25772479-25772559)
chr7 (139-280)||(28218178-28218321)
chr7 (398-464)||(14707286-14707352)
chr7 (133-282)||(16995198-16995347)
chr7 (138-280)||(48672277-48672422)
chr7 (166-215)||(20963561-20963610)
chr7 (138-280)||(12006541-12006683)
chr7 (138-280)||(10409609-10409751)
chr7 (138-280)||(23704896-23705038)
chr7 (27-129)||(24194943-24195050)
chr7 (138-282)||(38879721-38879867)
chr7 (138-215)||(24195031-24195108)
chr7 (397-458)||(32986338-32986399)
chr7 (138-203)||(44816913-44816978)
chr7 (139-215)||(7658037-7658113)
chr7 (138-214)||(20458758-20458834)
chr7 (19-99)||(48648377-48648457)
chr7 (138-280)||(25772364-25772506)
chr7 (138-279)||(31851242-31851382)
chr7 (398-464)||(33248837-33248904)
chr7 (138-282)||(41599956-41600101)
chr7 (138-279)||(48648263-48648404)
chr7 (414-459)||(20529906-20529951)
chr7 (398-462)||(5228064-5228128)
chr7 (138-196)||(1250291-1250349)
chr7 (398-463)||(8249698-8249764)
chr7 (422-464)||(10091492-10091534)
chr7 (414-464)||(10624832-10624882)
chr7 (407-464)||(44662498-44662556)
chr7 (397-464)||(15025148-15025216)
chr7 (398-464)||(40273814-40273881)
chr7 (397-436)||(48433774-48433813)
chr7 (407-464)||(9992612-9992670)
chr7 (398-436)||(23824655-23824693)
chr7 (409-450)||(20013586-20013627)
chr7 (138-215)||(23383566-23383643)
chr7 (401-464)||(27454007-27454071)
chr7 (138-215)||(33162770-33162847)
chr7 (396-464)||(46570006-46570075)
chr7 (159-203)||(24194973-24195017)
[»] chr3 (68 HSPs)
chr3 (19-280)||(14262152-14262414)
chr3 (19-280)||(45969915-45970177)
chr3 (19-281)||(5800604-5800867)
chr3 (19-215)||(14161937-14162133)
chr3 (19-280)||(14171702-14171964)
chr3 (19-280)||(19112881-19113143)
chr3 (19-214)||(30500157-30500352)
chr3 (19-281)||(15328462-15328722)
chr3 (19-203)||(21632974-21633158)
chr3 (27-194)||(4204832-4204999)
chr3 (19-215)||(45003562-45003758)
chr3 (19-215)||(52552808-52553000)
chr3 (19-203)||(17465484-17465667)
chr3 (27-280)||(43572389-43572645)
chr3 (19-215)||(49986594-49986790)
chr3 (27-280)||(9267099-9267352)
chr3 (19-280)||(16721991-16722253)
chr3 (27-214)||(38283617-38283804)
chr3 (19-215)||(20853812-20854008)
chr3 (19-215)||(33372472-33372667)
chr3 (19-212)||(47575388-47575581)
chr3 (19-197)||(35995794-35995972)
chr3 (70-212)||(11003801-11003943)
chr3 (138-215)||(4204774-4204851)
chr3 (138-280)||(9266975-9267118)
chr3 (135-214)||(43572623-43572702)
chr3 (115-215)||(17649222-17649322)
chr3 (138-280)||(21633131-21633274)
chr3 (138-280)||(33372640-33372782)
chr3 (398-464)||(50271723-50271789)
chr3 (138-280)||(16722226-16722369)
chr3 (138-280)||(35995678-35995821)
chr3 (138-214)||(38283785-38283861)
chr3 (398-464)||(49429454-49429520)
chr3 (138-215)||(14171652-14171729)
chr3 (138-215)||(15328695-15328772)
chr3 (138-215)||(20853762-20853839)
chr3 (138-215)||(45003731-45003808)
chr3 (138-280)||(45970150-45970294)
chr3 (138-214)||(14262103-14262179)
chr3 (138-214)||(30500108-30500184)
chr3 (397-464)||(32421340-32421408)
chr3 (138-215)||(52552758-52552835)
chr3 (410-462)||(43527815-43527867)
chr3 (397-464)||(45431619-45431687)
chr3 (166-213)||(36990923-36990970)
chr3 (166-213)||(37016363-37016410)
chr3 (138-215)||(14162106-14162183)
chr3 (138-215)||(19112831-19112908)
chr3 (400-464)||(47864631-47864696)
chr3 (398-462)||(50381707-50381772)
chr3 (141-213)||(35741823-35741895)
chr3 (396-436)||(46247251-46247291)
chr3 (138-198)||(49986763-49986823)
chr3 (398-464)||(166781-166848)
chr3 (397-436)||(2259149-2259188)
chr3 (410-464)||(9489482-9489537)
chr3 (393-436)||(33528269-33528312)
chr3 (166-213)||(35740883-35740930)
chr3 (398-436)||(11483606-11483644)
chr3 (398-436)||(30162650-30162688)
chr3 (167-282)||(5800869-5800984)
chr3 (181-284)||(19720329-19720433)
chr3 (399-436)||(25165434-25165471)
chr3 (407-464)||(27394510-27394567)
chr3 (140-213)||(32998371-32998444)
chr3 (225-280)||(35995997-35996053)
chr3 (388-436)||(39739257-39739305)
[»] chr2 (47 HSPs)
chr2 (19-203)||(22263307-22263491)
chr2 (35-214)||(23854798-23854977)
chr2 (19-201)||(23806032-23806214)
chr2 (19-280)||(17850702-17850964)
chr2 (19-283)||(42670835-42671100)
chr2 (19-196)||(26560670-26560847)
chr2 (19-280)||(15106067-15106329)
chr2 (27-267)||(26135831-26136071)
chr2 (30-214)||(20498813-20498996)
chr2 (31-280)||(39878103-39878352)
chr2 (27-280)||(19251471-19251724)
chr2 (19-212)||(17463160-17463353)
chr2 (34-203)||(13284539-13284708)
chr2 (37-214)||(33290116-33290293)
chr2 (96-203)||(26236205-26236311)
chr2 (138-267)||(26560570-26560697)
chr2 (19-99)||(26236277-26236357)
chr2 (138-283)||(23806187-23806333)
chr2 (138-282)||(15106302-15106445)
chr2 (138-282)||(17850585-17850729)
chr2 (396-464)||(43684270-43684338)
chr2 (138-280)||(19251705-19251847)
chr2 (142-282)||(34548572-34548712)
chr2 (138-280)||(26236330-26236472)
chr2 (138-215)||(20498980-20499057)
chr2 (138-215)||(22263257-22263334)
chr2 (396-464)||(24202141-24202210)
chr2 (172-282)||(23854686-23854797)
chr2 (152-280)||(13254497-13254626)
chr2 (138-203)||(39878337-39878402)
chr2 (138-280)||(17463326-17463469)
chr2 (19-99)||(30390575-30390655)
chr2 (32-79)||(13254638-13254685)
chr2 (398-441)||(41541574-41541617)
chr2 (138-212)||(30390528-30390602)
chr2 (138-203)||(13284486-13284551)
chr2 (396-463)||(12183771-12183839)
chr2 (160-200)||(13254693-13254733)
chr2 (401-464)||(32084841-32084905)
chr2 (166-213)||(21482143-21482190)
chr2 (175-214)||(44098894-44098933)
chr2 (166-203)||(23047848-23047885)
chr2 (407-464)||(25783249-25783306)
chr2 (138-215)||(26136052-26136129)
chr2 (407-464)||(29090418-29090475)
chr2 (401-464)||(18949719-18949783)
chr2 (138-198)||(33290284-33290344)
[»] chr6 (44 HSPs)
chr6 (19-281)||(9481181-9481444)
chr6 (19-214)||(30618029-30618223)
chr6 (19-203)||(2299426-2299609)
chr6 (19-212)||(24732007-24732200)
chr6 (27-198)||(30459025-30459196)
chr6 (27-208)||(10321854-10322036)
chr6 (19-277)||(26385394-26385649)
chr6 (32-256)||(3229992-3230215)
chr6 (27-195)||(14681006-14681174)
chr6 (96-215)||(33637625-33637744)
chr6 (19-149)||(33714603-33714733)
chr6 (96-280)||(32017698-32017881)
chr6 (63-197)||(18500506-18500641)
chr6 (63-182)||(17142798-17142916)
chr6 (138-280)||(18500315-18500457)
chr6 (19-94)||(32017652-32017727)
chr6 (19-117)||(18500430-18500528)
chr6 (19-99)||(33637709-33637790)
chr6 (152-215)||(19284195-19284258)
chr6 (397-464)||(24466824-24466891)
chr6 (142-215)||(26385344-26385417)
chr6 (138-215)||(30458967-30459044)
chr6 (138-214)||(9854122-9854198)
chr6 (138-280)||(24732173-24732315)
chr6 (138-215)||(33714553-33714630)
chr6 (138-198)||(14680965-14681025)
chr6 (138-214)||(30618196-30618272)
chr6 (417-464)||(9455852-9455899)
chr6 (138-212)||(10321799-10321873)
chr6 (160-214)||(17142744-17142798)
chr6 (138-215)||(9481417-9481494)
chr6 (138-203)||(33637763-33637828)
chr6 (138-198)||(32017619-32017679)
chr6 (398-464)||(6228295-6228362)
chr6 (409-464)||(7164699-7164754)
chr6 (171-275)||(9154884-9154990)
chr6 (398-464)||(15717048-15717115)
chr6 (397-446)||(4096618-4096666)
chr6 (400-437)||(17216953-17216990)
chr6 (399-436)||(21874285-21874322)
chr6 (167-203)||(17142798-17142834)
chr6 (229-280)||(18500655-18500707)
chr6 (225-280)||(24731935-24731991)
chr6 (229-280)||(30617967-30618019)
[»] scaffold0361 (2 HSPs)
scaffold0361 (19-280)||(4562-4825)
scaffold0361 (138-215)||(4798-4875)
[»] scaffold0141 (2 HSPs)
scaffold0141 (19-280)||(8325-8584)
scaffold0141 (138-215)||(8557-8634)
[»] scaffold0185 (2 HSPs)
scaffold0185 (29-198)||(3995-4164)
scaffold0185 (140-280)||(3869-4010)
[»] scaffold0881 (1 HSPs)
scaffold0881 (19-197)||(336-513)
[»] scaffold0176 (1 HSPs)
scaffold0176 (81-203)||(15811-15932)
[»] scaffold0449 (3 HSPs)
scaffold0449 (96-215)||(7392-7511)
scaffold0449 (44-98)||(7371-7426)
scaffold0449 (166-215)||(7292-7341)
[»] scaffold0117 (1 HSPs)
scaffold0117 (138-275)||(12217-12355)
[»] scaffold0477 (2 HSPs)
scaffold0477 (138-214)||(4983-5059)
scaffold0477 (19-104)||(4924-5010)
[»] scaffold0011 (1 HSPs)
scaffold0011 (421-464)||(15366-15409)
[»] scaffold0352 (1 HSPs)
scaffold0352 (167-213)||(4735-4781)
[»] scaffold0001 (1 HSPs)
scaffold0001 (398-430)||(419705-419737)


Alignment Details
Target: scaffold0809 (Bit Score: 160; Significance: 4e-85; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 30 - 280
Target Start/End: Complemental strand, 1661 - 1411
Alignment:
Q  30 tcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggg 129  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1661 tcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatctgaaattacaaggaccaaaagtgggaggaatctgaaattataggg 1562  T
Q  130 gcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagg 229  Q
     ||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||         |||||    
T  1561 acgtaatttatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc-ttttttttacagg 1463  T
Q  230 gactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||||||||| |||||||||  ||| || ||||||||||||||||    
T  1462 gactaaaatcgaaattcgcaaatattaccgggtcgaaaagaggtatttaccc 1411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 1645 - 1719
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||||||||| |||| ||| |||   |||||||||||||||||||||||| |||||||| |||| ||||||||    
T  1645 tatgcagattctgctgatgtggtgatgtgagggaccaaaagtggaagaatctgaaattacaaggacataatctaa 1719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 148; Significance: 6e-78; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 6e-78
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 10108632 - 10108370
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||| |||||||    
T  10108632 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggacgaatctg 10108533  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||       
T  10108532 aaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 10108433  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  10108432 ttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 10108370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 2583582 - 2583318
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || ||||| ||||||| |||||||||| |||||||||||||| ||||| |||| |||||||||||||| ||||||||||| |||||||||||    
T  2583582 attccaccacatcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggaggaatttgaaattacagggaccaaaagtaggaggaatctg 2583483  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||| ||||||| ||||||||  |||||||||||||  ||||||||||       
T  2583482 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatctaaatcttt 2583383  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
          ||| | |||||||||||||||| | ||||||| ||| | | ||||||||||||||||||    
T  2583382 tattttacaagaactaaaatcgaaattcgctaatattacaggaatgaaaagaggtatttacccaa 2583318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 14767623 - 14767883
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  14767623 attccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctg 14767722  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| |||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||| | |||||||||||||  ||||||| |        
T  14767723 aaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatctaatt---t 14767819  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccca 281  Q
          ||||||||||||| ||||||| || ||||||| ||| ||| |||||||||||||||||    
T  14767820 ttttttacagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttaccca 14767883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 17623003 - 17623199
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||||||||||  |||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||| ||    
T  17623003 attccaccacgtcagcagaatctgcgtacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatttg 17623102  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| | ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| | |||||||| ||||  ||||||||||    
T  17623103 aaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatctaaatc 17623199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 7689785 - 7689524
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||| |||| ||||||||||||||||||    
T  7689785 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggactaaaagtgggaggaatctg 7689686  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | | || |||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||||       
T  7689685 aaattacaaggacgtaattgatgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctgaaattacaaggac-aaatctaaatcttt 7689587  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||| ||||||||  |||||||| | ||||||| ||||||| ||||||||||||||||    
T  7689586 ttatttacaaggactaaagccgaaattcgctaatattacagggacgaaaagaggtatttaccc 7689524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 21148053 - 21148314
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||| ||| ||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||||||    
T  21148053 attccaccacgtcagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattata-ggaccaaaagtgggaggaatctg 21148151  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| ||||| |||||||| ||||||| |||||||||||||| | |||||||| ||||  ||||||| |        
T  21148152 aaattacagggacgtaatttatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatctaatttttt 21148251  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||||| ||||||| || |||| ||||||||||||||||    
T  21148252 ttttttacagggactaaaaccggaattcactaatattacagagacgaaaagaggtatttaccc 21148314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 280
Target Start/End: Original strand, 30789631 - 30789885
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||| |||| |||||| ||||||||||||||| |||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||| |    
T  30789631 acgttagcaaaatctgcatacatggcacgtaagatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatatgaaattaca 30789730  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
     || ||||||| ||||||||| | |||||||||||||| || ||||||||||||||||||||| |||||||||||||  ||||||||||         ||    
T  30789731 aggacgtaattgatgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttac 30789830  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||| || |||| || ||||||| ||||||| ||||||||||||||||    
T  30789831 agggactaaaaccggaatttactaatattacagggacgaaaagaggtatttaccc 30789885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 5555131 - 5554869
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| | ||||||| |||||| ||| ||||||||||||||||||||||||||| | || |||| ||||||||| ||||||||| | |||||||||||    
T  5555131 attccaccatgtcagcaaaatctgcataaatggcacgtaaaatgagggaccaaaagtgaaggaattcgaaattacagggaccaaaactaggaggaatctg 5555032  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||  |||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||| | |||||| ||||||  ||||| ||||       
T  5555031 aaattccagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatctgaatcttt 5554932  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  5554931 ttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 5554869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 283
Target Start/End: Complemental strand, 14820556 - 14820292
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||| | |||||||||||||||||||||  ||| ||||||| |||||  ||| ||||| | |||| ||||||    
T  14820556 attccaccacgtcagcagaatctgcatacatgactcgtaaaatgagggaccaaaagtagaggaatttgagattacggggagcaaaactaggagaaatctg 14820457  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||       
T  14820456 aaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-tt 14820358  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaat 283  Q
          ||||| ||||||| || ||||| | ||||||| ||||||| |||||||||||||||||||    
T  14820357 ttttttacaggaactaaaaccggaattcgctaatattacagggacgaaaagaggtatttacccaat 14820292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 26136947 - 26136752
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||  |||| ||| ||||| ||||||||||||||||||||| ||||||    
T  26136947 attccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaagtacaaggaccaaaagtgggagaaatctg 26136848  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||| |||| ||||||||||||||||| | ||||| |||||||| |||| | ||||| ||||||||||| |||||||| ||||  |||||||||    
T  26136847 aaattacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaaat 26136752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 19 - 202
Target Start/End: Complemental strand, 42606015 - 42605832
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| || || |||||||||||||||||||||||||||| |||| ||| ||||||||||  ||||||||| ||||||||| ||    
T  42606015 attccaccacgtaagcagaatttgcattcatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagcgaccaaaagcgggaggaatttg 42605916  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacaggga 202  Q
    |||||| |||| ||||||||||||| |||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||    
T  42605915 aaattacagggacgtaatttatgcatattctactgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacaggga 42605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 42113108 - 42113293
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| ||| ||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||| |||||||| |    
T  42113108 acgtcagcagaatctgcatacatgacacataaaatgagggaccaaaagtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattaca 42113207  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    ||| | ||||||||||||| | | ||||| |||||||| |||||| ||||||||||||||| | |||||| |||||| ||||||||    
T  42113208 gggacataatttatgcagaatttgctgacatgatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatctaa 42113293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 43851780 - 43851960
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || ||||||||||||| ||||||| |||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  43851780 attccaccacatcagcagaatctgcatacatgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaccaaaagtgggaggaatctg 43851879  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacag 199  Q
    |||||| | || ||||||| ||||| ||| | |||||||||||||| ||||||| ||||||||||||||||  ||||||||    
T  43851880 aaattacaaggacgtaattgatgcaaattttgctgacgtgatgaaaggagggacaaaaagtggaagaatcttgaattacag 43851960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 22494646 - 22494466
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| || ||||||| ||||||||||||||||||||||| |||| ||| |||||||||  ||||||||||| ||||||||||     
T  22494646 attccaccacgtaagcagaatttgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattactgggaccaaaagtaggaggaatcta 22494547  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagg 200  Q
    |||||| |||| ||||||||||||||||||| ||||||||||  ||||| ||||||||| ||||||||| | ||||||||||    
T  22494546 aaattacagggacgtaatttatgcagattctgctgacgtgat-taaagaaggaccaaaaatggaagaatatgaaattacagg 22494466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 35 - 203
Target Start/End: Original strand, 43481446 - 43481614
Alignment:
Q  35 agaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgta 134  Q
    ||||| || ||||||||||||||||| |||||| |||||| |||| ||| | ||||||||| |||||| ||  ||||||||||||||||| | || ||||    
T  43481446 agaatttgcatacatggcacgtaaaacgagggatcaaaagtggaggaatctaaaattacaaagaccaagagcaggaggaatctgaaattacaaggacgta 43481545  T
Q  135 atttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||||||||||||| | |||||||||| ||| ||  |||||| ||||||||||| | |||||||||||||    
T  43481546 atttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaattacagggac 43481614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 42113127 - 42112999
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| ||||| ||||||||||||||| |||||||| ||||||||||||| |||||||||||         |||||||||||||    
T  42113127 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatc-ttttttttacagggactaaaa 42113029  T
Q  238 tcgaaattcacaaatattatagggacgaaa 267  Q
    ||| ||||| | ||||||| ||||||||||    
T  42113028 tcggaattcgctaatattacagggacgaaa 42112999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 7689758 - 7689901
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || || |||||| ||||||||||||||||| |||||||||||||  ||| ||||||         ||| |||||||||    
T  7689758 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaa 7689857  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||| ||||| | ||||||| ||||||| ||||||||||||||||    
T  7689858 tcggaattcgctaatattacagggacgaaaagaggtatttaccc 7689901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 124
Target Start/End: Original strand, 26532899 - 26533004
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||  ||||| |||| ||| |||||||| | | |||||||||| ||||| | ||    
T  26532899 attccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggattaaaagtggaggaatctgaaattataggaaccaaaagtgtgaggagtttg 26532998  T
Q  119 aaatta 124  Q
    ||||||    
T  26532999 aaatta 26533004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 281
Target Start/End: Complemental strand, 43851807 - 43851664
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||| ||| || || |||||| ||||||||||||||||| |||||||||||||  ||||||||||         |||||||||||||    
T  43851807 tatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc-ttttgtttacagggactaaaa 43851709  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccca 281  Q
     || ||||| | ||||||| ||||||| |||||||||||||||||    
T  43851708 ccggaattcgctaatattacagggacgaaaagaggtatttaccca 43851664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 143 - 280
Target Start/End: Original strand, 10171383 - 10171521
Alignment:
Q  143 agattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaa 242  Q
    ||||||| ||||| ||||| || ||||||||||||||| ||||||||||||||||||||||  |||||||||          ||||||||||||| || |    
T  10171383 agattctgctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccgga 10171482  T
Q  243 attcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||| | ||||||| ||||||| |||| |||||||||||    
T  10171483 attcgctaatattacagggacgaaaagcggtatttaccc 10171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 17855642 - 17855709
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||||||||| ||||||||||| | ||| ||||||||||||||||||| |||||||||||||    
T  17855642 agtccccataagcttaactcatttggtaggcgataatgcatttgtatgcaggggccggggttcgaacc 17855709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 397 - 462
Target Start/End: Complemental strand, 19733172 - 19733106
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaa 462  Q
    |||||||||||||||||||||||||||||||||| ||||||  | ||||||||||||||||||||||    
T  19733172 agtccccataagcttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaa 19733106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 21148080 - 21148003
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  21148080 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 21148003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 10108605 - 10108748
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  10108605 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 10108704  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||  | ||||||| ||||||| ||||||||||| ||||    
T  10108705 ccggaatttgctaatattacagggacgaaaagaggtattaaccc 10108748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 14820529 - 14820672
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  14820529 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14820628  T
Q  238 tcgaaattcacaaatattatagggac-gaaagaggtatttaccc 280  Q
     || ||||| | ||||||| ||||||  ||||||||||| ||||    
T  14820629 ccggaattcgctaatattacagggactaaaagaggtattaaccc 14820672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 214
Target Start/End: Original strand, 21144713 - 21144816
Alignment:
Q  111 ggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatct 210  Q
    ||||||| |||||| |||| ||||||||||||||||||| |||||||| | |||  |||||| |||| |||| |||||| |||||||| ||||  |||||    
T  21144713 ggaatctcaaattacagggacgtaatttatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatct 21144812  T
Q  211 aaat 214  Q
    ||||    
T  21144813 aaat 21144816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 141 - 199
Target Start/End: Complemental strand, 17623027 - 17622969
Alignment:
Q  141 gcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacag 199  Q
    ||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||    
T  17623027 gcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacag 17622969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 26136920 - 26136994
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||||| |||||||||||||  |||||||    
T  26136920 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaa 26136994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 135 - 267
Target Start/End: Original strand, 5555101 - 5555233
Alignment:
Q  135 atttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggacta 234  Q
    ||||||||||||| | ||||| || || ||  ||||||||||||||||||||| | |||||||||||||  ||||||||||         |||| |||||    
T  5555101 atttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagacta 5555200  T
Q  235 aaatcgaaattcacaaatattatagggacgaaa 267  Q
    ||| |||||||| | ||||||| ||||||||||    
T  5555201 aaaccgaaattcgctaatattacagggacgaaa 5555233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 14767650 - 14767573
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  14767650 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 14767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 26532926 - 26532849
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || || |||||| ||||||||||| ||| | |||||||||||||  ||||||||||    
T  26532926 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatc 26532849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 38289334 - 38289270
Alignment:
Q  401 cccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||||||||||||||||||||||| |||||   | | ||||||||||||||||||||||    
T  38289334 cccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacc 38289270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 32822109 - 32822175
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||||  |||||  || |||||||||    
T  32822109 gtccccatgagcttaactcatttggtaagggataatgcatttgtatataggggcgggagttcgaacc 32822175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 22494619 - 22494684
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| ||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||    
T  22494619 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatttgaaattacagggac 22494684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 13906728 - 13906661
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  13906728 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 13906661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 41454929 - 41454862
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  41454929 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 41454862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 10621468 - 10621410
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||| ||| |||||||| ||||||| |||||||||||||| ||||| |||||    
T  10621468 agcttagctcacttgataagggataatgcattatgtatgcaggggtcagggtttgaacc 10621410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 200
Target Start/End: Complemental strand, 22848465 - 22848399
Alignment:
Q  135 atttatgcagattctactgacgtga-tgaaaagagggaccaaaagtggaagaatctaaaattacagg 200  Q
    |||||||||||||||  |||||||  ||||| |||||||||||| || |||||||| ||||||||||    
T  22848465 atttatgcagattcttttgacgtgggtgaaacgagggaccaaaaatgaaagaatctgaaattacagg 22848399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 44828535 - 44828497
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  44828535 gtccccatgagcttagctcatttggtaagggataatgca 44828497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 1032564 - 1032601
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  1032564 tccccatgagcttagctcatttggtaagggataatgca 1032601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 2583555 - 2583620
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||||  |||| ||| || || |||| ||||||||||||||||||| |||||| ||||||    
T  2583555 tatgcagattcggctgatgtggtggaatgaggaaccaaaagtggaagaatctgaaattatagggac 2583620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 409 - 464
Target Start/End: Complemental strand, 19957412 - 19957356
Alignment:
Q  409 cttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||| |||||||||||| |||||| || |||||||||| || ||||||||||    
T  19957412 cttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaacc 19957356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 143; Significance: 6e-75; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 14144163 - 14143902
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||| |||||||||    
T  14144163 attccaccacgtcaccagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacatggaccaaaagtggaaggaatctg 14144064  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| | |||||||||||||  ||||||||||       
T  14144063 aaattacagggacgtaatttatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-tt 14143965  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  14143964 ttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14143902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 7126033 - 7126229
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||    
T  7126033 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatg 7126132  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  7126133 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 7126229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 24074556 - 24074303
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||||||| ||||||||||||||     
T  24074556 acgtcagcagaatctgcatatatggcacgtaaaatgagggaccaaaagtggagaaatttgaaattaca-ggatcaaaagtgggatgaatctgaaattatg 24074458  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
    ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||| |||  |||||||||          ||    
T  24074457 gggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatatttttttttac 24074358  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||| |||||||| | ||||||| | ||||| ||||||||||||||||    
T  24074357 agggactaaaaccgaaattcgctaatattacatggacgaaaagaggtatttaccc 24074303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 276
Target Start/End: Original strand, 31799756 - 31800013
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| ||||||||||||| |||||||||||||||||||| |||| | |||||||||||| |||||||||||||||||||||||    
T  31799756 attccaccacgtaagcagaatttgtatacatggcatgtaaaatgagggaccaaaagtggaggattttgaaattacagggaccaaaagtgggaggaatctg 31799855  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||| ||||| |||||||||||||| |||||| |||||| |||||||||| |||||||| ||||  ||||||||||       
T  31799856 aaattaaagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatctaaatcttt 31799955  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtattt 276  Q
          ||| ||||||||| || ||||| | ||||||||||||||| ||||||||||||    
T  31799956 ttttttaca-ggactaaaaccggaattcgctaatattatagggacgaaaagaggtattt 31800013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 993863 - 994125
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |||| ||||| |||||||||||||||||||||||    
T  993863 attccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaa-ttacagggaccaaaagtgggaggaatctg 993961  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| |||||||||| ||||||||  |||| |||| ||| ||||||||||||||||||||||||  ||||||||||||  ||||||||||       
T  993962 aaattacagggacgtaatttatacagattctgttgacatgataaaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatctaaatcttt 994061  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacgaaagaggtatttacccaa 282  Q
          ||||||||||||| |||||||| | | |||||  ||||| ||| ||||||||||||||    
T  994062 tattctacagggactaaaaccgaaattcgctattattacggggacaaaaaaggtatttacccaa 994125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 24837285 - 24837547
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||||||||||||||| ||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||| ||||||||||    
T  24837285 attccaccacgtaagcagaatctgtatacatggtacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctg 24837384  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || |||||||||||||||||||  |||| |||||||| |||||| ||||||| ||||||| | |||||||||||||  ||||||||||       
T  24837385 aaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggagcaaaagtagaagaatttgaaattacagggacaaaatctaaatcttt 24837484  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          |||||||||||||  | ||||| | ||||||| ||||||| ||||||||||||||||    
T  24837485 ttttttacagggactaaaactggaattcgctaatattacagggacgaaaagaggtatttaccc 24837547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 19 - 202
Target Start/End: Original strand, 24650816 - 24650998
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||  |||| ||| |||||||||| |||||||| ||||||| ||| ||    
T  24650816 attccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaaatggaggaatctgaaattacagggaccaaa-gtgggagaaatatg 24650914  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacaggga 202  Q
    |||||| ||||  ||||||||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  24650915 aaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaattacaggga 24650998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 29445068 - 29444820
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||| | ||| || ||||||| ||||||||||||||||| ||||  | || |||||||||||||| ||||||||| | |||||||||||    
T  29445068 attccaccacgtcagtaaaatttgcatacatgacacgtaaaatgagggacaaaaaatgtaggaatttgaaattacagggaccaaaactaggaggaatctg 29444969  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| | |||||||| |||| |||||||||||       
T  29444968 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatctaaatcctt 29444869  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacgaaa 267  Q
          |||||||||||||||  |||||   ||||||| ||||||||||    
T  29444868 ttttttacagggactaaaatcagaattcgttaatattacagggacgaaa 29444820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 27 - 215
Target Start/End: Original strand, 20709336 - 20709524
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| |||| ||| |||||||||| ||| ||||||||||||||||||||||||| |    
T  20709336 acgtcagcagaatctgcatacatggcacgtaaaatgagggacaaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattaca 20709435  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||  |||||||||||| ||||| |||| ||||||||| || |||| |||||||||||||| | |||||||| ||||  ||||||||||    
T  20709436 gggatgtaatttatgcatattctgctgatgtgatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaatctaaatc 20709524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 17762544 - 17762283
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| || |||||||| || ||||||||||||||||||| |||| ||| | |||||||| |||||||||| ||||||||| ||    
T  17762544 attccaccacgtaagcagaatttgcatacatgggacataaaatgagggaccaaaagtggaggaatctaaaattacagggaccaaaagcgggaggaatatg 17762445  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| || ||||||| ||| |||||||||||||||||||||||| |||||||||| ||  ||| ||||||       
T  17762444 aaattacagggacgtaatttatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaatataaatc-tt 17762346  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggac-gaaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||  ||||||||||||||||    
T  17762345 ttttttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccc 17762283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 27 - 214
Target Start/End: Original strand, 6817246 - 6817432
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| |||||||||||||||||| |||||||||||  |||| ||| |||||||||| | | |||||||||||||||| |||||||| |    
T  6817246 acgtcagcagaatctgcatacatggcacgtaaaataagggaccaaaaatggaggaatctgaaattaca-gaatcaaaagtgggaggaatttgaaattaca 6817344  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||| ||||||||||||| ||||| |||| ||||||||| ||| |||||||||||||||||| | |||||||||||||  |||||||||    
T  6817345 gggacgtaatttatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 6817432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 4919106 - 4919299
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| || |||||||| |||||||||||||||||||||| |||| ||||||||||||||  |||||||||| |||||||| ||    
T  4919106 attccaccacgtaagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgaccaaaagttggaggaatatg 4919205  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||| | || ||||||||||||| |||||  |||| |||||||| |||||| ||||||| ||||||||| |||||||||||||  |||||||    
T  4919206 aaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggagggatcaaaagtagaagaatctgaaattacagggacaaaatctaa 4919299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 32 - 286
Target Start/End: Complemental strand, 18336705 - 18336461
Alignment:
Q  32 agcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggc 131  Q
    |||||||| |||||||||| ||||||||||||||||||||||| |||| ||| |||||||||| ||||            ||||||||||||| |||| |    
T  18336705 agcagaatttgtatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggac------------gaatctgaaattacagggac 18336618  T
Q  132 gtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc-nnnnnnnnnacaggg 230  Q
    |||||||||||| ||||| |||| ||||||||| |||||| |||||| |||||||||| |||||||||||||  ||||||||||          ||||||    
T  18336617 gtaatttatgcaaattctgctgatgtgatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatctaaatcttttttttttacaggg 18336518  T
Q  231 actaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaattaa 286  Q
    |||||||||| ||||| | ||||||||||||||| |||||| |||||||||||||||    
T  18336517 actaaaatcggaattcgctaatattatagggacgaaaagagatatttacccaattaa 18336461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 41001469 - 41001665
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| | || ||||||||||| ||||||||||||||||||||||||| ||||  |||| ||| |||||||||| |||||| ||||||||||||  ||    
T  41001469 attccaccatgtaagcagaatctgcatacatggcacgtaaaatgagggactaaaaatggaggaatctgaaattacagggaccagaagtgggaggaagatg 41001568  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| || | | ||||||||| || ||||  |||| |||||||| |||||||||||||||||||||||| |||||| ||||||  ||||||||||    
T  41001569 aaattacagtgacataatttatgtaggttctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatc 41001665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 96 - 280
Target Start/End: Complemental strand, 14411882 - 14411697
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||| |||||    
T  14411882 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 14411783  T
Q  196 acagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||  |||  ||| ||||||         ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  14411782 acatagacaaaatataaatctttttttatacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 27159154 - 27159268
Alignment:
Q  100 caaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacag 199  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||  ||||||||||| ||||||||| |||||||||||    
T  27159154 caaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattacag 27159253  T
Q  200 ggacttaatctaaat 214  Q
    ||||  |||||||||    
T  27159254 ggacaaaatctaaat 27159268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 23979136 - 23979281
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  23979136 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 23979235  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
     || ||||| | ||||||| ||||||| ||||||||||||||||||    
T  23979236 ccggaattcgctaatattacagggacgaaaagaggtatttacccaa 23979281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 6817265 - 6817123
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||| |||| |||||||||||         |||||||||||||    
T  6817265 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatc-ttttttttacagggactaaaa 6817167  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||||| ||||||| | ||||| ||||||||||||||||    
T  6817166 ccggaattcactaatattacaaggacgaaaagaggtatttaccc 6817123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 141
Target Start/End: Complemental strand, 23979155 - 23979042
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||| | |||||||| |||||||| | |||||||||||||||| ||| |||||||| |    
T  23979155 acgtcagcagaatctgcatacatgacacgtaaaatgagg-accaaacgtggagtaatctgaaattaaagggaccaaaagtgggagaaatatgaaattaca 23979057  T
Q  127 ggggcgtaatttatg 141  Q
     || |||||||||||    
T  23979056 aggacgtaatttatg 23979042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 53 - 198
Target Start/End: Original strand, 22571227 - 22571372
Alignment:
Q  53 acgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctact 152  Q
    |||| ||||||||||||||||| |||  ||| |||||||| | |||||||| || ||||||| ||||||||| |||| ||||||||||||||||| |  |    
T  22571227 acgtgaaatgagggaccaaaagcggatgaatatgaaattagagggaccaaatgtaggaggaacctgaaattacagggacgtaatttatgcagattttgtt 22571326  T
Q  153 gacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||| ||||| |||||| |||||   ||||||| | ||||||||    
T  22571327 gacgtggtgaaatgagggagcaaaacgagaagaatttgaaattaca 22571372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 20709355 - 20709278
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  20709355 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatc 20709278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 167 - 281
Target Start/End: Complemental strand, 31799754 - 31799639
Alignment:
Q  167 agggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-a 265  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||         ||||||||| ||| || ||||| | ||||||||||||||| |    
T  31799754 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaattcgctaatattatagggacgaa 31799655  T
Q  266 aagaggtatttaccca 281  Q
    ||||||||||||||||    
T  31799654 aagaggtatttaccca 31799639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 30512430 - 30512288
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||| ||||| |||||||||||||  ||||||||||         |||||||||||||    
T  30512430 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatc-ctttttttacagggactaaaa 30512332  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     | |||||||| ||||||| ||||||| |||||| |||||||||    
T  30512331 ccaaaattcactaatattacagggacgaaaagagatatttaccc 30512288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 30552770 - 30552628
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||| ||||| |||||||||||||  ||||||||||         |||||||||||||    
T  30552770 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatc-ctttttttacagggactaaaa 30552672  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     | |||||||| ||||||| ||||||| |||||| |||||||||    
T  30552671 ccaaaattcactaatattacagggacgaaaagagatatttaccc 30552628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 138 - 275
Target Start/End: Complemental strand, 7126060 - 7125923
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||||| |||||| ||||||  ||||||||||         |||||||||||||    
T  7126060 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatc-ttttttttacagggactaaaa 7125962  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatt 275  Q
    ||| ||||| | ||||||| ||| ||| |||||||||||    
T  7125961 tcggaattcgctaatattacaggaacgaaaagaggtatt 7125923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 14411928 - 14411847
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaag-gggagtaatttgaaattacaaggac 99  Q
    ||||||| |||| ||||||||||  ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  14411928 attccaccacgtaagcagaatctacatacatgacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 14411847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 20191444 - 20191501
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||| |||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  20191444 agcttaactcacttggtaagggataatgcatttatatgcaggggtcggggttcgaacc 20191501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 14144136 - 14144279
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    ||||||||||||  ||||||| || ||  ||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  14144136 tatgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14144235  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||| |||||   ||||||| || |||| ||||||||||| ||||    
T  14144236 tcggaattcgttaatattacagtgacgaaaagaggtattaaccc 14144279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 142 - 280
Target Start/End: Complemental strand, 24837308 - 24837169
Alignment:
Q  142 cagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcga 241  Q
    |||||||| || ||||| || || |||||||||||||||||||||| | |||||||| ||||  ||||||||||         ||||||||||||| ||     
T  24837308 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccgg 24837209  T
Q  242 aattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||| | | ||||| ||||||| ||||||||||||||||    
T  24837208 aattcgctattattacagggacgaaaagaggtatttaccc 24837169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 993890 - 993816
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||| ||||| |||||||    
T  993890 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaa 993816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 4919133 - 4919056
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| ||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  4919133 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 4919056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 18336720 - 18336835
Alignment:
Q  167 agggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-a 265  Q
    ||||| ||||||||||||||||| |||||||||||||  ||||||||||         ||||||||||||| || ||||| | ||| ||| ||||||| |    
T  18336720 agggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaat-ttacagggacgaa 18336818  T
Q  266 aagaggtatttacccaa 282  Q
    |||||||||||||||||    
T  18336819 aagaggtatttacccaa 18336835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 24074537 - 24074614
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| | |||  ||||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  24074537 tatgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24074614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 29445041 - 29445118
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| ||| |||||||||| || ||  ||||||||||||||||||||||| |||||||| ||||  ||||||||||    
T  29445041 tatgcaaattttactgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 29445118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 398 - 462
Target Start/End: Complemental strand, 31991863 - 31991798
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaa 462  Q
    |||||| | ||||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||    
T  31991863 gtccccttgagcttagctcacttggtaagggataatgcattatatatgcaggggtcggggttcgaa 31991798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 17762517 - 17762660
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||| ||||| || ||||| || || |||||||||||||||||||||||| ||||||  |||||  ||||||||||         |||||||||||||    
T  17762517 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaa 17762616  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     |  ||||| | |||| || ||||||| ||||||||||||||||    
T  17762617 ccagaattcgctaatactacagggacgaaaagaggtatttaccc 17762660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 22571206 - 22571144
Alignment:
Q  152 tgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||||| ||||| |||||||||||||||||||||| | ||||||||| ||  ||||||||||    
T  22571206 tgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaat 22571144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 27159133 - 27159068
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||| ||||| | |||||||| || ||  ||||||||||||||||||||||| |||||||||||||    
T  27159133 tatgtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggac 27159068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 14411901 - 14411977
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||| ||||||| || ||||| || || ||||||||||| |||||||||||| |||||||| ||||  |||||||||    
T  14411901 tatgtagattctgcttacgtggtggaatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaat 14411977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 30512403 - 30512459
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgt-aaaatgagggaccaaaag 74  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||| |||||    
T  30512403 attccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30512459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 30552743 - 30552799
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgt-aaaatgagggaccaaaag 74  Q
    ||||||| |||| ||||||||||| ||||||||||||| |||||||||||| |||||    
T  30552743 attccaccacgtaagcagaatctgcatacatggcacgtaaaaatgagggacgaaaag 30552799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 464
Target Start/End: Original strand, 34729481 - 34729532
Alignment:
Q  414 ctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    |||| |||||||||||| |||||| || ||||||||||||||||||||||||    
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaacc 34729532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 38503359 - 38503292
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  38503359 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 38503292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 268
Target Start/End: Complemental strand, 41001496 - 41001369
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || || || || || || ||||||||||||||||||| | |||||||||||||  ||||||| |          |||||||||||||    
T  41001496 tatgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaatt---tttttttacagggactaaaa 41001400  T
Q  238 tcgaaattcacaaatattatagggacgaaag 268  Q
     |||||||| | ||||||| |||||||||||    
T  41001399 ccgaaattcgctaatattacagggacgaaag 41001369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 27159106 - 27159185
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaag-gggagtaatttgaaattacaaggac 99  Q
    ||||||| ||||||||| |||||  ||||  |||||||||||||||||| |||||| ||||| ||| |||||||||| ||||    
T  27159106 attccaccacgtcagcaaaatctacatac--ggcacgtaaaatgagggatcaaaagtgggaggaatctgaaattacagggac 27159185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 31250141 - 31250207
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  31250141 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 31250207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 24650843 - 24650766
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||| | |||||||| || || |||  ||||||||||||||||| | |||||||||| ||  ||||||||||    
T  24650843 tatgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatc 24650766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 143; Significance: 6e-75; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 30 - 280
Target Start/End: Original strand, 52058138 - 52058386
Alignment:
Q  30 tcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggg 129  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  52058138 tcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggagtaatatgaaattacaaggaccaaaagtgggaggaatctgaaatcataggg 52058237  T
Q  130 gcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagg 229  Q
     |||||||||||||||||   |||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||         |||||    
T  52058238 acgtaatttatgcagatt---ctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttttttctacagg 52058334  T
Q  230 gactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     ||||||| | |||||| | ||||||| ||||||| ||||||||||||||||    
T  52058335 aactaaaaccaaaattcgctaatattacagggacgaaaagaggtatttaccc 52058386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 4907078 - 4907274
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||| ||||||| |||||||||| |||||||||||||| ||||| |||  ||| |||||||||| ||||||||||| |||||||||||    
T  4907078 attccaccacgtcagccgaatctgcatacatggcatgtaaaatgagggactaaaagtggatgaatctgaaattacagggaccaaaagtaggaggaatctg 4907177  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  4907178 aaattacagggacgtaatttatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 4907274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 20995930 - 20995746
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||||||||||| |||| |||||||||||||| |||| ||||||||||||||||||    
T  20995930 attccaccacgtcagcagaatctgcatacatggcacgtaaa-tgagggaccaaaagtggagaaatttgaaattacagggacgaaaagtgggaggaatctg 20995832  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggact 204  Q
    |||||| |||| ||||||||||||||||||| ||||||||||||||  |||||||||||||| |||||| ||||||||||||||||    
T  20995831 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtgaaagaatataaaattacagggact 20995746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 17606570 - 17606374
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||| ||    
T  17606570 attccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatatg 17606471  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| |||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||| ||  ||||||||||    
T  17606470 aaattacagggacgtaatttatacagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatctaaatc 17606374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 43539609 - 43539413
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||| ||||||| ||||||| |||||||||||||| |||||||| |||| |||||||||||||| ||| ||||||||||||||||||     
T  43539609 attccaccacgtcagccgaatctgcatacatgacacgtaaaatgaggtaccaaaagtggaggaatttgaaattacagggagcaaaagtgggaggaatcta 43539510  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||||||||||||  ||||||||||    
T  43539509 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatctaaatc 43539413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 39826166 - 39826426
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||| ||| ||||||||||||||||||     
T  39826166 attccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatcta 39826265  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | ||||||||||||||    ||||||||||||||||||||| |||||||||||||  ||||||||||       
T  39826266 aaattacaaggacgtaattgatgcagattttgctgacgtgatgaaa----ggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 39826361  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
          ||||||||||||| |||||||| | ||||||| | ||||| ||||||||||||||||||    
T  39826362 ttatttacagggactaaaaccgaaattcgctaatattacatggacgaaaagaggtatttacccaa 39826426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 30299493 - 30299232
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||| |||| ||| |||||||||||| || ||||||||||||||||||    
T  30299493 attccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaagaactaaaagtgggaggaatctg 30299394  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||| |||||||  |||| |||||||| ||| |||||||||||||||||| | |||||||||||||  ||||||||||       
T  30299393 aaattacagggacgtaatttatggagattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 30299294  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||| |||||||||||||| ||| | ||||||| ||||||| ||||||||||||||||    
T  30299293 ttttttaca-ggactaaaatcgaagttcgctaatattacagggacgaaaagaggtatttaccc 30299232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 24467881 - 24467629
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| |||||||| |    
T  24467881 acgtcagtagaatctgcatacatggcacgtaaaatgagg-accaaatgtggagtaatctgaaattacagggaccaaaagtgggaggaatatgaaattaca 24467783  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
      | |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||         ||    
T  24467782 atgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc-ttttttttac 24467684  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||||||||||| | ||||| | ||||||| ||||||| ||||| ||||||||||    
T  24467683 agggactaaaattggaattcgctaatattacagggacgaaaagatgtatttaccc 24467629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 30 - 201
Target Start/End: Original strand, 42510141 - 42510312
Alignment:
Q  30 tcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggg 129  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||| ||||    
T  42510141 tcagcagaatctgcatacatggcacgtgaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacaggg 42510240  T
Q  130 gcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacaggg 201  Q
    | |||||||||||||||||| |||||||||||||| ||||||  | |||||||||||||| |||||| ||||    
T  42510241 gtgtaatttatgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctgaaattataggg 42510312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 39711334 - 39711138
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| || ||||||||||||||||||||||||||||||| |||| |||  ||||||||| |||||||||| ||||||||| ||    
T  39711334 attccaccacgtaagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatccgaaattacagggaccaaaagcgggaggaatatg 39711235  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  39711234 aaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 39711138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 48072215 - 48072027
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |||||||||| ||| |||||||||||||||| |||||||| |    
T  48072215 acgtcagcagaatctgcatacatgtcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggatcaaaagtgggaggaatttgaaattaca 48072116  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||| ||||||||||||| ||||| |||| ||||||||| |||||| ||||||||||| ||| | |||||||||||||  ||||||||||    
T  48072115 gggacgtaatttatgcatattctgctgatgtgatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatctaaatc 48072027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 18462538 - 18462286
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||| ||||||||| |||||||||||| ||||||||| |||||| | |||||||| |||||||| | |||||||||||||||||||| |||||||| |    
T  18462538 acgtcaacagaatctgcatacatggcacgcaaaatgagg-accaaacgtggagtaatatgaaattatagggaccaaaagtgggaggaatatgaaattaca 18462440  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
      | |||||||||||||||||||| |||| |||||||| |||||||||||| ||||||||||| |||||||||||||  ||||||||||         ||    
T  18462439 atgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatc-ttttttttac 18462341  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  18462340 agggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 18462286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 19 - 282
Target Start/End: Original strand, 39970762 - 39971026
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||  ||| |||||||||| | ||||||||||||||||||||     
T  39970762 attccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggaccaaaagtggatgaatctgaaattacatg-accaaaagtgggaggaatcta 39970860  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc-nn 217  Q
    |||||  |||| |  ||||||||| |||||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||  ||||||||||       
T  39970861 aaatttcagggacacaatttatgcggattctgctgacgtgatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatctaaatcttt 39970960  T
Q  218 nnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
           ||||||||||||| ||||||||   ||||||| | ||||| ||||||||||||||||||    
T  39970961 tttttttacagggactaaaaccgaaattcgttaatattacatggacgaaaagaggtatttacccaa 39971026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 33628806 - 33628990
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || | |||||||| || |||||||||||||||||||||||||||||||  ||| ||| |||||||||| |||||||||| ||||||||| ||    
T  33628806 attccaccacataagcagaatttgcatacatggcacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggaccaaaagcgggaggaatttg 33628905  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| |||| | ||||||||| ||||||| |||||||||| ||| |||||||||||||||||||||||| |||||||||||||    
T  33628906 aaattacagggacataatttatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagggac 33628990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 282
Target Start/End: Complemental strand, 8293069 - 8292802
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaa---aaggggagtaatttgaaattacaaggaccaaaagtgggaggaat 115  Q
    ||||||| | |||||| ||||||| |||||||||| | |||||||||||| ||   ||| |||| ||| | |||||||| ||||||||||| ||||||||    
T  8293069 attccaccatgtcagccgaatctgcatacatggcatgaaaaatgagggactaattaaagtggaggaatctaaaattacatggaccaaaagtaggaggaat 8292970  T
Q  116 ctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| | ||||| |||||||  ||||||||||    
T  8292969 ctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatctaaatc 8292870  T
Q  216 nnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
             ||||||||||||| ||  |||| | |||| || ||||||| |||||| |||||||||||    
T  8292869 ttttattttacagggactaaaaccgggattcgctaatagtacagggacgaaaagagttatttacccaa 8292802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 13229993 - 13229815
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||| |||| |||||||||||||||||| |||| ||| |||||||||| |||||||||||| ||||||||||    
T  13229993 attccaccacgtaagcagaatctgcatacatgacacgcaaaatgagggaccaaaagtggaggaatctgaaattaca-ggaccaaaagtgagaggaatctg 13229895  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||| |||| ||||||||||||||||| |  |||| |||||||| ||| || ||||||||||||||| | ||||||||    
T  13229894 aaattacagggacgtaatttatgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaatatgaaattaca 13229815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 51 - 280
Target Start/End: Complemental strand, 29696793 - 29696565
Alignment:
Q  51 gcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattcta 150  Q
    |||||||||||||||||||||||| |||| ||| ||||| |||| |||||||| ||||||||||| ||||||||||||| | |||||||||||||||||     
T  29696793 gcacgtaaaatgagggaccaaaagtggaggaatctgaaaatacagggaccaaa-gtgggaggaatatgaaattatagggacataatttatgcagattctg 29696695  T
Q  151 ctgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaa 250  Q
    | || ||||||||| ||| ||| |||||||||||||| | ||||||| |||||  ||||||||||         |||| |||||||| |||||||| | |    
T  29696694 ccgatgtgatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatctaaatc-ttttttttacagagactaaaaccgaaattcgcta 29696596  T
Q  251 atattatagggacg-aaagaggtatttaccc 280  Q
    |||||| ||||||| ||||||||||||||||    
T  29696595 atattacagggacgaaaagaggtatttaccc 29696565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 96 - 282
Target Start/End: Original strand, 34749299 - 34749485
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||| ||||||||||||||| ||||  |||||||||||||||||| |||||||||| ||| |||| ||||||||||||||||||| |||||    
T  34749299 ggaccaaaagtgg-aggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaatt 34749397  T
Q  196 acagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggac-gaaagaggtatttacccaa 282  Q
    |||||||   ||||||||||         ||| |||||||||||| |||||   ||||||| || |||  ||||||||||||||||||    
T  34749398 acagggataaaatctaaatctttttttttacaaggactaaaatcggaattcgataatattacagagacaaaaagaggtatttacccaa 34749485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 24467862 - 24468004
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||         |||||||||||||    
T  24467862 tatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 24467961  T
Q  238 tcgaaattcacaaatattatagggacgaaagaggtatttacccaa 282  Q
     || ||||||| ||||||| | |||  ||||||||||||||||||    
T  24467962 ccggaattcactaatattacatgga--aaagaggtatttacccaa 24468004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 39826193 - 39826050
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||| ||||||||||||||||| |||||||||||||  ||||||||||         |||||||||||||    
T  39826193 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 39826094  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||| | ||||||||| ||||| ||||||||||||||||    
T  39826093 tcgaaattcgctaatattatatggacgaaaagaggtatttaccc 39826050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 35 - 198
Target Start/End: Original strand, 7473924 - 7474083
Alignment:
Q  35 agaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgta 134  Q
    |||||||| ||||||||||||| |||||| ||| |||||| |||| ||| |||||||||||||||||||||||||||||  |||||||  |||||   ||    
T  7473924 agaatctgcatacatggcacgtgaaatgatggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggagga--ctgaaat--tagggatata 7474019  T
Q  135 atttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    ||||||||||||| | || | ||| | |||  ||||||||||||| || |||| | ||||||||    
T  7474020 atttatgcagattttgctcaagtggttaaataagggaccaaaagtagaggaatatcaaattaca 7474083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 30299466 - 30299611
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || ||||||||||||||||||||||||||||||||||||||  ||||||||||         ||||| |||||||    
T  30299466 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaa 30299565  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
     |||||||  | ||||||| || |||| ||| ||||||||||||||    
T  30299566 ccgaaatttgctaatattacagagacgaaaataggtatttacccaa 30299611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 52058154 - 52058077
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||| ||| ||||| |||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  52058154 tatgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatc 52058077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 4907105 - 4906962
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||  |||||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  4907105 tatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaa 4907006  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
        ||||||| ||||||| ||||||| ||||||||||||||||    
T  4907005 ctagaattcactaatattacagggacgaaaagaggtatttaccc 4906962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 48072196 - 48072272
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| |||||||| ||||| ||||  |||||||||||||||| | ||||||||||||| ||||||||||    
T  48072196 tatgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaat 48072272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 34749253 - 34749328
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattaca 94  Q
    ||||||| |||| |||||||| || |||||||||| |||||||||||||||||||| |||| ||| ||||||||||    
T  34749253 attccaccacgtaagcagaatttgcatacatggcatgtaaaatgagggaccaaaagtggaggaatctgaaattaca 34749328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 96 - 214
Target Start/End: Original strand, 16294140 - 16294258
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    |||||||||||||  ||||||  |||||| |||| ||||||||||| ||||||| ||||| || | |||  |||||||||||||||| |||| | |||||    
T  16294140 ggaccaaaagtggatggaatcataaattacagggacgtaatttatgtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaatt 16294239  T
Q  196 acagggacttaatctaaat 214  Q
    ||| ||||  |||||||||    
T  16294240 acaaggacaaaatctaaat 16294258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 35309718 - 35309784
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| || ||||||||||||||||| || | |||||||    
T  35309718 gtccccatgagcttagctcatttggtaagggataatacatttgtatgcaggggttggaggtcgaacc 35309784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 7473935 - 7473862
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatcta 211  Q
    ||||||||||||  ||||||| ||||| |||||||||||||||||||||| | ||||||||| ||| |||||||    
T  7473935 tatgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagacataatcta 7473862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 18462519 - 18462596
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||||||||||||  ||||||| ||||| ||| |||||||||||||||||||| ||||||| |||||  ||||||||||    
T  18462519 tatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatc 18462596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 39711307 - 39711450
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||| ||||| || ||||| || || |||||||||||||||||||||| | ||||||| |||||  ||||||||||         |||||||||||||    
T  39711307 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaa 39711406  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     |  ||||| | ||||||| ||||||| ||||||||||||||||    
T  39711407 ccagaattcgctaatattacagggacgaaaagaggtatttaccc 39711450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 42510157 - 42510081
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| |||| ||| ||||| ||||||| |||||||||||||| | |||||||||||||  |||||||||    
T  42510157 tatgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaat 42510081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 44583584 - 44583646
Alignment:
Q  401 cccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaac 463  Q
    ||||| |||||| |||||||| |||||||| || |||||||||| ||||||||||||||||||    
T  44583584 cccatgagcttaactcatttgataagggataatacatttgtatgtaggggtcggggttcgaac 44583646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 8293042 - 8293119
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||  ||||| || || || |||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  8293042 tatgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 8293119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 20995903 - 20995980
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||| | ||||||||| |||  ||||||||||    
T  20995903 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatc 20995980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 139 - 212
Target Start/End: Original strand, 29696794 - 29696867
Alignment:
Q  139 atgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    ||||||||||| || ||||| || || |||||||||||||||||||||||| |||||||| ||||  |||||||    
T  29696794 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatggacaaaatctaa 29696867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 39970789 - 39970712
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||| | |||||||| || || |||||||||||||||||||||||| ||||||||  |||  ||||||||||    
T  39970789 tatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatc 39970712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 19424050 - 19424106
Alignment:
Q  409 cttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||||| |||||||| |||||| || ||||||||||||||||||||||||    
T  19424050 cttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaacc 19424106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 17606543 - 17606684
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||| ||| | |||||||| || ||  ||||||||||||||||||||||| |||||||| ||||  ||||||||||         |||||||||||||    
T  17606543 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc--tttttttacagggactaaaa 17606640  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||| | ||||||| ||||||| ||||||||||| ||||    
T  17606641 ccggaattcgctaatattacagggacgaaaagaggtattaaccc 17606684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 35 - 124
Target Start/End: Original strand, 215044 - 215133
Alignment:
Q  35 agaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaatta 124  Q
    |||||||| ||| ||| ||||| ||||||  ||||||||| |||| ||| | |||||||| ||||| |||||| ||| ||||||||||||    
T  215044 agaatctgcatatatgacacgtgaaatgaatgaccaaaagtggaggaatcttaaattacacggaccgaaagtgagagaaatctgaaatta 215133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 463
Target Start/End: Original strand, 17916709 - 17916766
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaac 463  Q
    ||||||||||||||||||| |||| ||| ||| | |||||||||||||||||||||||    
T  17916709 agcttagctcatttggtaaaggataatgtattatatatgcaggggtcggggttcgaac 17916766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 34749280 - 34749203
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| ||||| || ||||| || || |||||||||||||||||||||| | ||||||| |||||  ||||||||||    
T  34749280 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatc 34749203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 385 - 464
Target Start/End: Complemental strand, 24134738 - 24134659
Alignment:
Q  385 tataacaaaactagtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  24134738 tataacaagacta-tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 24134659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 166 - 280
Target Start/End: Complemental strand, 33628805 - 33628690
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg- 264  Q
    ||||||||||||||| |||||||| ||||||| |||||  ||||||||||         || |||||||||| |  ||||| | ||||||| |||||||     
T  33628805 gagggaccaaaagtgaaagaatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaaccagaattcgctaatattacagggacga 33628706  T
Q  265 aaagaggtatttaccc 280  Q
    ||||||||||||||||    
T  33628705 aaagaggtatttaccc 33628690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 464
Target Start/End: Complemental strand, 34702416 - 34702348
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  34702416 agtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 34702348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 24253745 - 24253678
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| ||||||||||| ||| |||||||| ||||||  | ||||||||||||||| ||||||||    
T  24253745 gtccccatgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacc 24253678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 27054683 - 27054750
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  27054683 gtccccatgagcttagctcatttggtaagggataatgcacaatatctgcaggggccggggttcgaacc 27054750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 437
Target Start/End: Complemental strand, 39304305 - 39304266
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcat 437  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  39304305 gtccccatgagcttagctcatttggtaagggataatgcat 39304266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 160 - 203
Target Start/End: Original strand, 42510167 - 42510210
Alignment:
Q  160 tgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||||| ||||||||||||||||| |||||| |||||||||||||    
T  42510167 tgaaatgagggaccaaaagtggaggaatctgaaattacagggac 42510210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 49619964 - 49620003
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  49619964 agtccccatgagcttagctcatttggtaagggataatgca 49620003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 22779225 - 22779283
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||| |||||||||||| |||||| || ||| |||| |||||||||||||||    
T  22779225 agcttagctcacttggtaagggataatgcatattttatacaggagtcggggttcgaacc 22779283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 50011500 - 50011538
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgca 50011538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 50065003 - 50065041
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  50065003 gtccccataagcttagctcatttgataagggataatgca 50065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 17501967 - 17502040
Alignment:
Q  140 tgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    |||||||||| |||||  | | ||| ||||||| ||||||||| |||||| |||||||||||||  ||||||||    
T  17501967 tgcagattctgctgacagggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaa 17502040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 277
Target Start/End: Complemental strand, 17606360 - 17606307
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtattta 277  Q
    |||||||||||||||| ||||| | ||||||| ||||||| |||||||||||||    
T  17606360 acagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 17606307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 225 - 281
Target Start/End: Original strand, 18342339 - 18342396
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccca 281  Q
    ||||||||||||| |||||||| | ||||||| ||||||| ||| |||||||||||||    
T  18342339 acagggactaaaaccgaaattcgctaatattacagggacgaaaaaaggtatttaccca 18342396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 13229966 - 13230014
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaa 186  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||    
T  13229966 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaa 13230014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 202
Target Start/End: Original strand, 34749296 - 34749332
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacaggga 202  Q
    ||||||||||||||||| |||||| ||||||||||||    
T  34749296 gagggaccaaaagtggaggaatctgaaattacaggga 34749332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Complemental strand, 35527603 - 35527571
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggat 430  Q
    |||||||| ||||||||||||||||||||||||    
T  35527603 gtccccatgagcttagctcatttggtaagggat 35527571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 6e-69; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 27 - 277
Target Start/End: Complemental strand, 9396953 - 9396702
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |||||||||| ||| ||||||||||||||||||||||||| |    
T  9396953 acgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggatcaaaagtgggaggaatctgaaattaca 9396854  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
    ||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| | |||||| ||||||  ||||||||||         ||    
T  9396853 gggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatctaaatcttttttttaac 9396754  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtattta 277  Q
    || ||||||||||||||||| | ||||||| ||||||| |||||||||||||    
T  9396753 agagactaaaatcgaaattcgctaatattacagggacgaaaagaggtattta 9396702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 46046540 - 46046801
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| || |||||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  46046540 attccaccacgttagtagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 46046639  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | |||||||||||||| |||||| ||||||||||||||||| |||||||||||||  ||||||||||       
T  46046640 aaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 46046739  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacgaaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| |||||||||| ||||||||||||    
T  46046740 ttatttacagggactaaaaccggaattcgctaatattacagggacgaaaaaggtatttaccc 46046801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 7819276 - 7819080
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  7819276 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacatggaccaaaagtgggaggaatctg 7819177  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||| ||||||||| |||| ||||||||||| |||| ||||||||||||||||||| |||||||||||||  ||||||||||    
T  7819176 aaattacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 7819080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 37012823 - 37013016
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||| |||| ||    
T  37012823 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaagtaggaagaatatg 37012922  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||| |||| ||||||||||||||||| | |||||||||||||| ||| |||||||||||||||||| | |||||||||||||  |||||||    
T  37012923 aaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatctaa 37013016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 3018274 - 3018078
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| |||||| ||||||| ||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||||| ||    
T  3018274 attccaccacgtcagcataatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattatagggaccaaaagtgggaggaatgtg 3018175  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  3018174 aaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 3018078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 198
Target Start/End: Complemental strand, 4356143 - 4355964
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||||    
T  4356143 attccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattacaaggaccaaaagtaggaggaatctg 4356044  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||| | || ||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||| | ||||||||    
T  4356043 aaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattaca 4355964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 284
Target Start/End: Original strand, 9516726 - 9516992
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||  |||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  9516726 attccaccacgtaagcagaatctgcatacatgatacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 9516825  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||||||| ||||| |  |||| |||||||| |||||||||||||| ||||||||| |||||||||||||  ||||||||||       
T  9516826 aaattacaaggacgtaatttatgtagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatcttt 9516925  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaatt 284  Q
          |||| |||||||| |||||||| | ||||||| ||||||| |||||| |||||||||||||    
T  9516926 ttttttacagagactaaaaccgaaattcgctaatattacagggacgaaaagagatatttacccaatt 9516992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 19 - 267
Target Start/End: Original strand, 38574084 - 38574332
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||| |||| ||| ||||||||||  ||||||||||||||||||||||    
T  38574084 attccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggaccaaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctg 38574183  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| || |||| ||||||||| |  ||||||||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||       
T  38574184 aaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttt 38574283  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacgaaa 267  Q
          ||||||||||||| |  ||||| | ||||||| ||||||||||    
T  38574284 ttatttacagggactaaaaccagaattcgctaatattacagggacgaaa 38574332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 15640969 - 15640781
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    ||||||||||||| || ||||||| |||||||||||| |||||||||| |||| ||| |||||||||||||| ||||||||||||||||||||||||| |    
T  15640969 acgtcagcagaatatgcatacatgacacgtaaaatgatggaccaaaagtggaggaatctgaaattacaaggatcaaaagtgggaggaatctgaaattaca 15640870  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||| ||||||||||||| ||||| |||| ||||||||| ||||||||||||||| |||||| | |||||||||||||  ||||||||||    
T  15640869 gggacgtaatttatgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatctaaatc 15640781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 31090177 - 31090439
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| || |||||||| ||||||||||| |||||||||| |||| ||| |||||||||  |||||||||||||||| ||||||    
T  31090177 attccaccacgtaagcagaatttgcatacatggtacgtaaaatgaaggaccaaaagtggaggaatctgaaattacggggaccaaaagtgggagaaatctg 31090276  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||||||| |||||||| |||| |||||||| |||||||||||||| ||||||||| |||||||||||||  ||||||| |        
T  31090277 aaattacaaggacgtaatttatgtagattctattgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaatttttt 31090376  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          |||||||||||||||||||||| | ||||||| ||||||| |||||| |||||||||    
T  31090377 ttttttacagggactaaaatcgaaattcgctaatattacagggacgaaaagagatatttaccc 31090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 19 - 267
Target Start/End: Complemental strand, 9619241 - 9618994
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||||||||||| |||||||||||| |||||| |||||| |||| ||| |||||||||| ||||||||| |||||||||| ||    
T  9619241 attccaccacgtaagcagaatctgtatacctggcacgtaaaaagagggagcaaaagtggaggaatctgaaattacagggaccaaaaatgggaggaatatg 9619142  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||| |||||||||||||||  |||| |||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||       
T  9619141 aaattacagggacgt-atttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 9619043  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacgaaa 267  Q
          ||||||||||||| || ||||| | ||||||| | ||||||||    
T  9619042 gtttttacagggactaaaaccggaattcgctaatattacatggacgaaa 9618994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 18667551 - 18667387
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||| |||||||||||    
T  18667551 attccaccacgtcagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttaaaattacagggaccaaaagttggaggaatctg 18667452  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaa 183  Q
    |||||| |||| ||||||||||||||||| |  ||||||||||||| ||||||||||||||||||    
T  18667451 aaattacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaa 18667387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 18713222 - 18713026
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||  |||||| | ||||||| ||||||||||||||  ||| |||||||||||||| |||||||||| ||||||||||||    
T  18713222 attccaccacgtcagcagaatctacatacattgaacgtaaactgagggaccaaaagttgaggaatttgaaattacatggaccaaaagagggaggaatctg 18713123  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||||||| | |||||||||||||| |||||||||||| ||||| ||| | |||||||||||||  ||||||||||    
T  18713122 aaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatctaaatc 18713026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 34064098 - 34064294
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || ||||| ||||||  |||||||||| |||||||||||||| ||||| |||| ||| |||||||||| ||||||||||| |||||||||||    
T  34064098 attccaccacatcagccgaatctacatacatggcatgtaaaatgagggactaaaagtggaggaatctgaaattacagggaccaaaagtaggaggaatctg 34064197  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||| ||||||||| |||  ||||||||||    
T  34064198 aaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatc 34064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 27 - 280
Target Start/End: Original strand, 13132065 - 13132317
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| ||||||||||||||| | ||||| |||||||| |||||||||| |||||||||||||||| ||| |||||||| |    
T  13132065 acgtcagcagaatctgcatacatgacacgtaaaatgaggggctaaaagtggagtaatctgaaattacatggaccaaaagtgggagaaatatgaaattaca 13132164  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
     || ||||||||||||||||||| ||||  ||||||||  ||||||||||||||||||||| | |||||||||||||  ||||||||||         ||    
T  13132165 aggacgtaatttatgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaaatc-ttttttttac 13132263  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    | |||||||||||||||||| | ||||||| ||||||| ||| ||||||||||||    
T  13132264 a-ggactaaaatcgaaattcgctaatattacagggacgaaaataggtatttaccc 13132317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 3273874 - 3273700
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    ||||||| |||||||| |||||||||||||||||||||| |||||| | |||||||| |||||||||| |||||||||||||||||||| |||||||| |    
T  3273874 acgtcagtagaatctgcatacatggcacgtaaaatgagg-accaaacgtggagtaatctgaaattaca-ggaccaaaagtgggaggaatatgaaattaca 3273777  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
     || |||||||||||||||||||| |||| |||||||| |||||||||||||||||||||| | |||||||||||||    
T  3273776 aggacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaattacagggac 3273700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 31944212 - 31944016
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||| ||||||||| |||| |||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  31944212 attccaccacgtcaacagaatctgcatacttggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacatggaccaaaagtgggaggaatctg 31944113  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || | ||||| |||||| || |  ||||||||||||| ||| |||||||||||||||||| | |||||||||||||  ||||||||||    
T  31944112 aaattacatggacataattgatgcaggttttgttgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 31944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 48579982 - 48580178
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||  |||||||||||||||||||||||| |||||| |||| |||||||||||| |  ||||||||||||||||||| ||    
T  48579982 attccaccacgtcagcagaatctacatacatggcacgtaaaatgagggagcaaaagtggaggaatttgaaattagagagaccaaaagtgggaggaatttg 48580081  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||||||||| ||||| || | ||||||||| |||||||||||||||||| ||| | |||||||||||||  ||||||||||    
T  48580082 aaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaatc 48580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 96 - 212
Target Start/End: Complemental strand, 26252453 - 26252337
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||| |||||||| |||||||||||||||||||||||| |||||    
T  26252453 ggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaatt 26252354  T
Q  196 acagggacttaatctaa 212  Q
    ||||||||  |||||||    
T  26252353 acagggacaaaatctaa 26252337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 35376344 - 35376228
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    |||||||||||||||||||||||   ||| | || | |||||||||| |||||| |||||||||||||| ||| ||||||||||||||||||||||||||    
T  35376344 ggaccaaaagtgggaggaatctg---ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaatt 35376248  T
Q  196 acagggacttaatctaaatc 215  Q
    |||| |||  ||||||||||    
T  35376247 acagagacaaaatctaaatc 35376228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 48260005 - 48259908
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaatta 124  Q
    ||||||||| |||||| |||||||||||||||||||||||| |||||| |||| ||| |||||| ||| ||||||||||| |||||||||||||||||    
T  48260005 acgtcagcataatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaataacagggaccaaaagtaggaggaatctgaaatta 48259908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 26252499 - 26252418
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaag-gggagtaatttgaaattacaaggac 99  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  26252499 attccactacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 26252418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 38574111 - 38573969
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||         ||||||| |||||    
T  38574111 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggattaaaa 38574013  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||| ||||||| ||||||| | ||||| ||||||||||||||||    
T  38574012 tcggaattcactaatattacatggacgaaaagaggtatttaccc 38573969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 37574266 - 37574332
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||    
T  37574266 gtccccatgagcttagctcatttggtaagggataatgcatttgtatgcaggggccggggttcaaacc 37574332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 3273855 - 3273932
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||||||||||||||||||||| ||||| |||||| ||||||||||||||||| ||||||||||||   ||||||||||    
T  3273855 tatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatc 3273932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 15640950 - 15641027
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| ||||| |||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||    
T  15640950 tatgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatc 15641027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 31090204 - 31090058
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc-nnnnnnnnnacagggactaaa 236  Q
    |||||| ||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||          ||||||||||||    
T  31090204 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 31090105  T
Q  237 atcgaaattcacaaatattatagggac-gaaagaggtatttacccaa 282  Q
    |||||||||||| ||||||| ||||||  ||||| ||||||||||||    
T  31090104 atcgaaattcactaatattacagggacaaaaagaagtatttacccaa 31090058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 13132084 - 13132007
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| ||||| |||||| ||||||||||||||||| |||||||| | || |||||||||||    
T  13132084 tatgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatc 13132007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 37012850 - 37012773
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  37012850 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 37012773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 35376390 - 35376335
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaag 74  Q
    ||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||    
T  35376390 attccaccacgtcagcaaaatctgtatacatgacacgtaaaatgagggaccaaaag 35376335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 113 - 212
Target Start/End: Original strand, 41947066 - 41947165
Alignment:
Q  113 aatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||||||||| |||| |||||||||||||||||||  |||| | ||||||  ||||||||||||||||| ||| | |||||||| ||||  |||||||    
T  41947066 aatctgaaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatctaa 41947165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 399 - 464
Target Start/End: Original strand, 38690660 - 38690726
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||| ||||||||||| |||||||||||| |||||| || ||||||||||||||||||||||||    
T  38690660 tccccatgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaacc 38690726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 7819249 - 7819314
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||||| |||||||| || || |||||||||||||||||||||||| | |||||||||||    
T  7819249 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggac 7819314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 9396934 - 9397011
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || || || || |||||||||||||||||| |||||||||||||  ||||||||||    
T  9396934 tatgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 9397011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 9516753 - 9516611
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||| ||||  ||||||||||         ||| |||||||||    
T  9516753 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaa 9516654  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacc 279  Q
     || ||||| | ||||||| ||||||| |||||| ||||||||    
T  9516653 ccggaattcgctaatattacagggacgaaaagagatatttacc 9516611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 46046567 - 46046502
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||||||||||||||| ||||| || || |||||| ||||||||||||||| | |||||||||||||    
T  46046567 tatgcagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaattacagggac 46046502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 48259986 - 48260063
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||| | ||||||||||| || ||| || ||||||||||||||| | |||||||||||||  ||||||||||    
T  48259986 tatgcagattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaattacagggacaaaatctaaatc 48260063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 18667524 - 18667587
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacaggg 201  Q
    ||||||||||||||||||||| || ||  |||||| |||| ||||||||||| |||||||||||    
T  18667524 tatgcagattctactgacgtggtggaataagggacaaaaactggaagaatctgaaattacaggg 18667587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 44251407 - 44251364
Alignment:
Q  419 ttggtaagggatgatgcatttgtatgcaggggtcggggttcgaa 462  Q
    |||||||||||| |||||||| ||||||||||||||||||||||    
T  44251407 ttggtaagggataatgcatttttatgcaggggtcggggttcgaa 44251364  T

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Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 36888917 - 36888991
Alignment:
Q  140 tgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||| |||||  | | ||| ||||||| ||||||||| |||||| ||||||||||||| ||||||||||    
T  36888917 tgcagattctgctgacaaggttaaacgagggactaaaagtggaggaatctgaaattacagggacataatctaaat 36888991  T

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Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 4356116 - 4356177
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacag 199  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||| | |||||||||    
T  4356116 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacag 4356177  T

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Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 18713195 - 18713272
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||| ||||||| |||||||| || ||  ||||||||||| ||||||||||| ||||||||| |||  ||||||||||    
T  18713195 tatgtagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagacaaaatctaaatc 18713272  T

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Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 26252472 - 26252549
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || ||||  || || | |||||||||||||||||||| | |||||||||||||  ||||||||||    
T  26252472 tatgcagattctgcttacgtagtggaatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 26252549  T

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Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 34064097 - 34064048
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||||||||||||||| ||||||||| |||  ||||||||||    
T  34064097 gagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatc 34064048  T

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Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 415 - 464
Target Start/End: Original strand, 34974712 - 34974761
Alignment:
Q  415 tcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||||||||| ||||||||||||| |||||  ||||||||||||    
T  34974712 tcatttggtaagggataatgcatttgtatgtaggggctggggttcgaacc 34974761  T

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Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 142 - 203
Target Start/End: Original strand, 35376367 - 35376428
Alignment:
Q  142 cagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| | |||||||| || || |||||||||||||||||||| ||| |||||||||||||    
T  35376367 cagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggac 35376428  T

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Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 280
Target Start/End: Original strand, 9619218 - 9619357
Alignment:
Q  142 cagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcga 241  Q
    |||||||| || ||||| || || || ||||||||||||||||||| | |||||||| ||||  ||||||||||         ||||||||||||| |      
T  9619218 cagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccag 9619317  T
Q  242 aattcacaaatattatagggac-gaaagaggtatttaccc 280  Q
    ||||| | ||||||| ||||||  ||||||||||||||||    
T  9619318 aattcgctaatattacagggacaaaaagaggtatttaccc 9619357  T

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Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 53758980 - 53759032
Alignment:
Q  410 ttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaa 462  Q
    |||||||| |||||||||||| |||||| | |||||||||||||| |||||||    
T  53758980 ttagctcaattggtaagggataatgcatatatatgcaggggtcggagttcgaa 53759032  T

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Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 424 - 464
Target Start/End: Original strand, 56555568 - 56555608
Alignment:
Q  424 aagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  56555568 aagggataatgcatttatatgcaggggtcggggttcgaacc 56555608  T

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Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 36699496 - 36699535
Alignment:
Q  175 aaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||| ||||||||||||||||||||||| ||||||||||    
T  36699496 aaagtagaagaatctaaaattacagggacataatctaaat 36699535  T

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Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 226 - 280
Target Start/End: Complemental strand, 41947020 - 41946965
Alignment:
Q  226 cagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||||||||||| || ||||||| ||||||| ||||||| ||||||||||||||||    
T  41947020 cagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttaccc 41946965  T

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Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 51974740 - 51974807
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | ||||||||||||| ||||||||    
T  51974740 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcgggattcgaacc 51974807  T

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Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 138 - 212
Target Start/End: Original strand, 31944185 - 31944259
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    ||||||||||||  ||||||| || || ||||||| |||||||||||||| | |||||||| ||||  |||||||    
T  31944185 tatgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggacaaaatctaa 31944259  T

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Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 3018247 - 3018312
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||| | |||||||| || ||  ||||||||||||||| ||||||| |||||||| ||||    
T  3018247 tatgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattacacggac 3018312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 18667508 - 18667471
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  18667508 gagggaccaaaagtggaggaatttaaaattacagggac 18667471  T

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Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 40407062 - 40407025
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  40407062 tccccatgagcttagctcatttggtaagggataatgca 40407025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 43362272 - 43362203
Alignment:
Q  396 tagtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||| ||||| ||||||||||||||| |||||||| |||||   | ||| ||||||||||||||||||||    
T  43362272 tagttcccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaacc 43362203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 48580009 - 48579932
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||| ||||||| |||||||| || ||  ||||||||||| || |||||||| ||||||||| |||  ||||||||||    
T  48580009 tatgtagattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatc 48579932  T

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Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 12904803 - 12904747
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||||| | |||||| | ||||||||||||||| |||||| |||||||||    
T  12904803 acagggactaaaaccaaaattcgctaatattatagggacgaaaagagatatttaccc 12904747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 20069538 - 20069610
Alignment:
Q  141 gcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    ||||||||| ||||| || |  || ||| |||||||||||||||||||| |||| | |||||| |||||||||    
T  20069538 gcagattctgctgacatgtttcaatgagagaccaaaagtggaagaatctcaaatgatagggacataatctaaa 20069610  T

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Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 31218303 - 31218359
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  31218303 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 31218359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 46046486 - 46046430
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||||||||||||||| ||||| | ||||||| ||||||| ||| ||||||||||||    
T  46046486 acagggactaaaatcggaattcgctaatattacagggacgaaaaaaggtatttaccc 46046430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 462
Target Start/End: Complemental strand, 56088026 - 56087963
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaa 462  Q
    ||||||||||||||||||| ||||| ||||||  |||| ||| |||||||||| |||||||||||    
T  56088026 tccccataagcttagctcagttggt-agggatattgcattttatatgcaggggccggggttcgaa 56087963  T

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Target: chr7 (Bit Score: 132; Significance: 2e-68; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 41600074 - 41600336
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  41600074 attccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 41600173  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||       
T  41600174 aaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 41600273  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggac-gaaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||  ||||||||||||||||    
T  41600274 ttatttacagggactaaaaccggaattcgctaatattacagggacaaaaagaggtatttaccc 41600336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 23704923 - 23704739
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  23704923 attccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 23704824  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| ||||  ||||||||||||||||||| |||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  23704823 aaattacagggaagtaatttatgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggac 23704739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 12006656 - 12006918
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||||||||||||||||||| |||||| |||| ||| ||||||||||  ||||||||||||||||||||||    
T  12006656 attccaccacgttagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagtgaccaaaagtgggaggaatctg 12006755  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | |||||||||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||       
T  12006756 aaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttt 12006855  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          |||||||||||||||| ||||| | ||||||| | | ||| ||||||||||||||||    
T  12006856 ttatttacagggactaaaatcggaattcgctaatattacatgaacgaaaagaggtatttaccc 12006918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 48672395 - 48672657
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||||| ||||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||| ||    
T  48672395 attccaccacgtcagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatttg 48672494  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | || ||||||||||| |||||||||||||||||||||||| ||||||||||||   ||||||||||       
T  48672495 aaattacaaggacgtaattgatgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatctaaatcttt 48672594  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| |||||||| | ||||||| || |||| ||||||||||||||||    
T  48672595 ttatttacagggactaaaaccgaaattcgctaatattacagagacgaaaagaggtatttaccc 48672657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 23383616 - 23383878
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||     
T  23383616 attccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacaaggaccaaaagtgggaggaatcta 23383715  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || |||| ||||||||||||||  |||| |||||||| ||||||||||| |||||||||| | |||||||||||||  ||||||||||       
T  23383716 aaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatctaaatcttt 23383815  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
           ||||||||||||||  ||||||| ||||||| ||||||| ||||||||||||||||    
T  23383816 tttttttcagggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccc 23383878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 20458807 - 20459003
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||| ||||||||||||    
T  20458807 attccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagcgggaggaatctg 20458906  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||| |||||  |||| |||| ||| |||||||||||||||||||||||| ||||||||| |||  ||||||||||    
T  20458907 aaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatctaaatc 20459003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 60 - 280
Target Start/End: Original strand, 28218320 - 28218541
Alignment:
Q  60 atgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtga 159  Q
    ||||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||| |  ||||||||    
T  28218320 atgagggaccaaaagtggagtaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcagattttgttgacgtga 28218419  T
Q  160 tgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatag 259  Q
    ||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||         ||||||||||||| || ||||| | ||||||| ||    
T  28218420 tgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttatttacagggactaaaaccggaattcgctaatattacag 28218519  T
Q  260 ggacg-aaagaggtatttaccc 280  Q
    ||||| ||||||||||||||||    
T  28218520 ggacgaaaagaggtatttaccc 28218541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 20419652 - 20419848
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  20419652 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggaccaaaagtgggaggaatctg 20419751  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||||||| ||||| |  |||| |||||||| |||||||||||||| ||||||||| |||||||||||||  ||||||||||    
T  20419752 aaattacaaggacgtaatttatgaagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatc 20419848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 32 - 214
Target Start/End: Original strand, 20963624 - 20963805
Alignment:
Q  32 agcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggc 131  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||  ||| ||||||||||||||||||||||||||||||| |||||||| |||| |    
T  20963624 agcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaagaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 20963723  T
Q  132 gtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| ||| |  ||||||||||||| || |||||||||||| |||||||| |||||||||||||| |||||||||    
T  20963724 gtaatttatgcaaattatgttgacgtgatgaaagga-ggaccaaaagtgaaagaatctgaaattacagggactaaatctaaat 20963805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 31851363 - 31851548
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||| ||||| || |||||||||||||||| |    
T  31851363 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagaaatatgaaattacagggatcaaaattgagaggaatctgaaattaca 31851462  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    ||| ||||||||||||| ||||| |||| ||||||||| ||| |||||||||||||||||| | |||||||||||||  |||||||    
T  31851463 gggacgtaatttatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 44816951 - 44817128
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||| ||    
T  44816951 attccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtggaaggaatttg 44817050  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatta 196  Q
    ||| || | |  |||||||||||||||||||| |||| |||||||||||||||||||||||| |||||| | ||||||    
T  44817051 aaactacatgtacgtaatttatgcagattctattgacttgatgaaaagagggaccaaaagtgaaagaatatgaaatta 44817128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 38879840 - 38880035
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||||||| |||||||||||||||||   |||| ||| |||||||| |  ||||||||||||||||||| ||    
T  38879840 attccaccacgtaagcagaatctgcatacatggcacataaaatgagggaccaaatttggaggaatctgaaattatagagaccaaaagtgggaggaatatg 38879939  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||| |||| |||||||||||||||||||  |||| || ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||    
T  38879940 aaattacagggacgtaatttatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 38880035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 58 - 214
Target Start/End: Complemental strand, 6466077 - 6465921
Alignment:
Q  58 aaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgt 157  Q
    ||||||||||||||||| |||||||| |||||||||| ||| |||||||||||||||| |||||||| |||| | ||||||||||||||||| |||||||    
T  6466077 aaatgagggaccaaaagtggagtaatatgaaattacagggatcaaaagtgggaggaatttgaaattacagggacataatttatgcagattcttctgacgt 6465978  T
Q  158 gatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||||| |||||||||||||||||||||||| |||||||| | || ||||||||||    
T  6465977 gatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatctaaat 6465921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 10409636 - 10409440
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||| |||||| |||| ||| |||||||||||||||||||||| |||||||||||    
T  10409636 attccaccacgttagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatctgaaattacaaggaccaaaagtaggaggaatctg 10409537  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || ||||||| ||||||||| | |||| |||||||||  |||||| |||||| ||||||||| |||||||| ||||  ||||||||||    
T  10409536 aaattacaaggacgtaattgatgcagattttgctgaagtgatgaaagaagggactaaaagtagaagaatctgaaattacaaggacaaaatctaaatc 10409440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 1250322 - 1250518
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||| ||||||| ||||||| || ||||||||| |||  ||||| |||| ||| || |||||||  |||||||| | |||||||| ||    
T  1250322 attccaccacgtcagctgaatctgcatacatgtcatgtaaaatgaaggattaaaagtggaggaatatggaattacagtgaccaaaaataggaggaatttg 1250421  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | |||||| ||||||  ||||||||||    
T  1250422 aaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatctaaatc 1250518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 27 - 203
Target Start/End: Original strand, 7658095 - 7658269
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    ||||||||| |||||| || |||| ||||||||||||||||| |||||  ||  ||| |||||||| |||||||||||||||||||||| |||||||| |    
T  7658095 acgtcagcaaaatctgcat-catgtcacgtaaaatgagggactaaaagtagatgaatctgaaatta-aaggaccaaaagtgggaggaatatgaaattaca 7658192  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||| | ||||||||||||||| | |||||||||||||| ||| |||||||||||||||||||| |||||||||||||    
T  7658193 gggacataatttatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaattacagggac 7658269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 27 - 178
Target Start/End: Complemental strand, 33162789 - 33162638
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||| | |||||| |||||||||| ||||||||||||| |||||| |||||||| |    
T  33162789 acgtcagcagaatctgcatacatggcacataaaatgagggaccaaaagtgaagtaatctgaaattacacggaccaaaagtggaaggaatttgaaattaca 33162690  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaag 178  Q
     |  |||||||||| |||||||||||||||||||||||  ||||| ||||||    
T  33162689 agaacgtaatttatacagattctactgacgtgatgaaagaagggatcaaaag 33162638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 96 - 280
Target Start/End: Original strand, 25772525 - 25772709
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||| ||||||||||||||| | || |||||||||||||||||||  |||| |||||||| |||||||||||||| ||||||||| |||||    
T  25772525 ggaccaaaagtgg-aggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatt 25772623  T
Q  196 acagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||  ||||||||||         |||||||||||||  | ||||||| ||||||||||||||| |||||| |||||||||    
T  25772624 acagggacaaaatctaaatctttttttttacagggactaaaactggaattcactaatattatagggacgaaaagagatatttaccc 25772709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 48648434 - 48648541
Alignment:
Q  108 ggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaa 207  Q
    ||||||||||||||||| |||| |||||||||||||||||||  ||||||||||||| ||||||||| |||||||||||||||||||||||  |||  ||    
T  48648434 ggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaa 48648533  T
Q  208 tctaaatc 215  Q
    ||||||||    
T  48648534 tctaaatc 48648541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 138 - 283
Target Start/End: Complemental strand, 20419679 - 20419533
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||| ||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  20419679 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 20419580  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacccaat 283  Q
     || ||||| | ||||||||||||||| |||||||||||||||||||    
T  20419579 ccggaattcgctaatattatagggacgaaaagaggtatttacccaat 20419533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 25772479 - 25772559
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggac 99  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||    
T  25772479 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggac 25772559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 139 - 280
Target Start/End: Complemental strand, 28218321 - 28218178
Alignment:
Q  139 atgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc-nnnnnnnnnacagggactaaaa 237  Q
    ||||||||||| |||||||| || || |||||||||||||||||||||||| |||||||||||||  ||||||||||          |||||||||||||    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 28218222  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||| | ||||||| ||||||| ||||||||||||||||    
T  28218221 ccggaattcgctaatattacagggacgaaaagaggtatttaccc 28218178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 14707286 - 14707352
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||    
T  14707286 gtccccatgagcttagctcatttggtaagggataatgcatttatatgcaggggttggggttcgaacc 14707352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 133 - 282
Target Start/End: Complemental strand, 16995347 - 16995198
Alignment:
Q  133 taatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggac 232  Q
    ||||| ||||||||||| |||||||| || || | |||||||||||||||||||||| |||||||||||||  |||||||||          ||||| ||    
T  16995347 taattgatgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat-attttttttacaggaac 16995249  T
Q  233 taaaatcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
    ||||| |||||||| | ||||||| || |||| ||||||||||||||||||    
T  16995248 taaaaccgaaattcgctaatattacagagacgaaaagaggtatttacccaa 16995198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 48672422 - 48672277
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc--nnnnnnnnnacagggactaa 235  Q
    |||||||||||| |||||||| || || |||||| ||||||||||||||||| ||||||||| |||  ||||||||||           |||| ||||||    
T  48672422 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaa 48672323  T
Q  236 aatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    || |||||||||| ||||||| ||||||| ||||||||||||||||    
T  48672322 aaccgaaattcactaatattacagggacgaaaagaggtatttaccc 48672277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 20963610 - 20963561
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20963610 gagggaccaaaagtggaagaatctaaaattacagggactaaatctaaatc 20963561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 12006683 - 12006541
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||| ||||||||||||||||| |||||||||||||  ||||| |||          |||||||||||||    
T  12006683 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatct-aatttttttttttacagggactaaaa 12006585  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||| ||||| | ||||||| ||||||| ||||||||||||||||    
T  12006584 tcggaattcgctaatattacagggacgaaaagaggtatttaccc 12006541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 10409609 - 10409751
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||| ||||||||||||||||||||||||||| |||  ||||||||||         |||||||||||||    
T  10409609 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatc-ttttttttacagggactaaaa 10409707  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||| ||||| | ||||||| | ||| | ||||||||||||||||    
T  10409708 tcggaattcgctaatattacatggatgaaaagaggtatttaccc 10409751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 23704896 - 23705038
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  23704896 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttacagggactaaaa 23704994  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||| | ||||||| || |||| ||||||||||||||||    
T  23704995 ccggaattcgctaatattacagagacgaaaagaggtatttaccc 23705038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 27 - 129
Target Start/End: Complemental strand, 24195050 - 24194943
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaa-----atgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaa 121  Q
    |||| ||||||||||| |||||||  |||||||     ||||||||||||||| |||| ||| |||||||| | |||||||||||| |||||||||||||    
T  24195050 acgtaagcagaatctgcatacatgatacgtaaaatgaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgagaggaatctgaaa 24194951  T
Q  122 ttataggg 129  Q
    ||| ||||    
T  24194950 ttacaggg 24194943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 38879867 - 38879721
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc-nnnnnnnnnacagggactaaa 236  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||          ||||| ||||||    
T  38879867 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaa 38879768  T
Q  237 atcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
    || | ||||| | ||||||| ||||||| ||||||||||||||||||    
T  38879767 attggaattcgctaatattacagggacgaaaagaggtatttacccaa 38879721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 24195031 - 24195108
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || |||||||| || |||||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  24195031 tatgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 24195108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 458
Target Start/End: Original strand, 32986338 - 32986399
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggtt 458  Q
    ||||||||| | |||| ||||||||| ||||||| |||||||||||||||||||||||||||    
T  32986338 agtccccatcaacttaactcatttggcaagggataatgcatttgtatgcaggggtcggggtt 32986399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 44816978 - 44816913
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||||| |||||||||||||    
T  44816978 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggac 44816913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 7658113 - 7658037
Alignment:
Q  139 atgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||||||||| | |||||||||||||| || |||||||||||| |||||| | |||||||| |||| |||||||||||    
T  7658113 atgcagattttgctgacgtgatgaaaggatggaccaaaagtgtaagaatttgaaattacatggacataatctaaatc 7658037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 20458834 - 20458758
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||||| ||||||||| |||  |||||||||    
T  20458834 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaat 20458758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 48648377 - 48648457
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggac 99  Q
    ||||||| |||| || |||||||| ||||||||||||||||| ||||||||||||  |||| ||| |||||||||| ||||    
T  48648377 attccaccacgtaagtagaatctgcatacatggcacgtaaaaggagggaccaaaattggaggaatctgaaattacagggac 48648457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 25772506 - 25772364
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||| ||||||||||||||| | |||||||| ||||  ||||||||||         ||||  |||||||    
T  25772506 tatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatc-ttttttttacagaaactaaaa 25772408  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||| | ||||||| ||||||| ||||||||||||||||    
T  25772407 tcgaaattcgctaatattacagggacgaaaagaggtatttaccc 25772364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 31851382 - 31851242
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| ||||||||| || ||||||||||| ||| | ||||||||  |||  |||||||||          ||||| |||||||    
T  31851382 tatgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattacaatgacagaatctaaat--ttttttttacaggaactaaaa 31851285  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacc 279  Q
    ||||||||||| ||||||| | ||||| |||||||||||||||    
T  31851284 tcgaaattcactaatattaaaaggacgaaaagaggtatttacc 31851242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 33248904 - 33248837
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| ||||||||||||||||||||||||||||||   | ||||||| ||||||||||||||||    
T  33248904 gtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaacc 33248837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 41600101 - 41599956
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||| |||| |||||||||||| |||||||||||||  |||||||||          | | |||||||||    
T  41600101 tatgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaa 41600002  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
     |||||||| | ||||||| ||||| | ||||||||||||||||||    
T  41600001 ccgaaattcgctaatattacagggatgaaaagaggtatttacccaa 41599956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 138 - 279
Target Start/End: Complemental strand, 48648404 - 48648263
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    ||||||||||||||| ||||| || || |||||||||||| || || ||||| |||||||||||||  ||||||||||         ||| |||||||||    
T  48648404 tatgcagattctacttacgtggtggaatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatc-tttttcttacatggactaaaa 48648306  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacc 279  Q
    ||||||||| |  |||||| ||||||| |||||| ||||||||    
T  48648305 tcgaaattcgctgatattacagggacgaaaagagatatttacc 48648263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 414 - 459
Target Start/End: Original strand, 20529906 - 20529951
Alignment:
Q  414 ctcatttggtaagggatgatgcatttgtatgcaggggtcggggttc 459  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||    
T  20529906 ctcatttggtaagggataatgcatttgtatgcagggatcggggttc 20529951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 5228064 - 5228128
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaa 462  Q
    |||||||| ||||||||||| ||| ||| |||| |||||||| |||||||||| |||||||||||    
T  5228064 gtccccatgagcttagctcacttgataaaggataatgcatttttatgcaggggccggggttcgaa 5228128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 1250349 - 1250291
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatta 196  Q
    |||||||||||  |||||||| || || ||| |||||||||||||||||||||||||||    
T  1250349 tatgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaatta 1250291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 8249698 - 8249764
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaac 463  Q
    |||||||| ||||||||||| ||||||| |||| ||||||  | |||||||||||||||||||||||    
T  8249698 gtccccatgagcttagctcacttggtaaaggataatgcataatatatgcaggggtcggggttcgaac 8249764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 464
Target Start/End: Complemental strand, 10091534 - 10091492
Alignment:
Q  422 gtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  10091534 gtaagggataatgcatttgtatgcaggggccggggttcgaacc 10091492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 464
Target Start/End: Complemental strand, 10624882 - 10624832
Alignment:
Q  414 ctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||| ||||||||| ||||||||||| |||||||||||    
T  10624882 ctcatttgataagggataatgcatttgcatgcaggggtcagggttcgaacc 10624832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 44662556 - 44662498
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||| | |||||||||| ||||||| |||||||||||| |||||||||||||    
T  44662556 agcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaacc 44662498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 15025148 - 15025216
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||| |||||| ||||||||||||||||| |||||| || ||| |||||| |||||||| ||||    
T  15025148 agtccccatgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaacc 15025216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 40273814 - 40273881
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  40273814 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 40273881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Complemental strand, 48433813 - 48433774
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  48433813 agtccccatgagcttagctcatttggtaagggataatgca 48433774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 9992612 - 9992670
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||||||| |||||||| ||||||| |||||| || | ||||||||||||||    
T  9992612 agcttagctcatttgataagggataatgcattatgtatgtagagatcggggttcgaacc 9992670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Complemental strand, 23824693 - 23824655
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  23824693 gtccccatgagcttagctcatttggtaagggataatgca 23824655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 409 - 450
Target Start/End: Original strand, 20013586 - 20013627
Alignment:
Q  409 cttagctcatttggtaagggatgatgcatttgtatgcagggg 450  Q
    |||| |||||||||||| |||| |||||||||||||||||||    
T  20013586 cttaactcatttggtaaaggataatgcatttgtatgcagggg 20013627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 23383643 - 23383566
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || ||||| || || ||||||| |||| ||||||||| | |||||| ||||||  ||||||||||    
T  23383643 tatgcagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatc 23383566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 27454007 - 27454071
Alignment:
Q  401 cccataagcttagctcatttggtaagggatgatgc---atttgtatgcaggggtcggggttcgaacc 464  Q
    ||||| |||||||||||||||||||||||| ||||   |||||  ||||||||||| ||||||||||    
T  27454007 cccatgagcttagctcatttggtaagggataatgcacaatttg--tgcaggggtcgaggttcgaacc 27454071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 33162770 - 33162847
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| ||||| ||  ||| |||||||||||||| | ||||||||  ||| ||||| |||||    
T  33162770 tatgcagattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattacaatgacataatccaaatc 33162847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 464
Target Start/End: Complemental strand, 46570075 - 46570006
Alignment:
Q  396 tagtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| | ||||||||||| ||| |||||||| ||||||  | |||||||||| |||||||||||||    
T  46570075 tagtccccgtgagcttagctcacttgataagggataatgcatagtttatgcaggggccggggttcgaacc 46570006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 159 - 203
Target Start/End: Complemental strand, 24195017 - 24194973
Alignment:
Q  159 atgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| ||||||||||||||||| |||||| |||||| ||||||    
T  24195017 atgaaatgagggaccaaaagtggaggaatctgaaattatagggac 24194973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 132; Significance: 2e-68; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 14262152 - 14262414
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||||| ||||||||     
T  14262152 attccaccacatcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtggaaggaatcta 14262251  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||| ||| | |||||||||||||  ||||||||||       
T  14262252 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatctaaatcttt 14262351  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  14262352 ttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14262414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 45970177 - 45969915
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||| | ||||||| ||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  45970177 attccaccacgtaagcagaatccgcatacatgacacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctg 45970078  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| |||||||||||||||||||  |||| |||||||| ||| ||||||||||| |||||||| |||||||||||||  ||||||||||       
T  45970077 aaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatcttt 45969978  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||||| ||||||| ||||||| ||||||||||||||||    
T  45969977 ttttttacagggactaaaaccggaattcactaatattacagggacgaaaagaggtatttaccc 45969915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 5800867 - 5800604
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || |||||| ||| || |||||||||| |||||||||||||||||||  |||| |||||||||||||| ||||||||| | |||||||||||    
T  5800867 attccaccacttcagcaaaatttgcatacatggcatgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctg 5800768  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| | ||||||||||||| |||||||||||       
T  5800767 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatctaaatcctt 5800668  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccca 281  Q
          ||||||||||||| ||||||||   ||||||| ||||||| |||||||||||||||||    
T  5800667 ttttttacagggactaaaaccgaaattcgttaatattacagggacgaaaagaggtatttaccca 5800604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 14162133 - 14161937
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||| | |||||||||||    
T  14162133 attccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaattaggaggaatctg 14162034  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  14162033 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatctaaatc 14161937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 14171702 - 14171964
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||  |||| ||| |||||||||| |||||||||||||||||||||||    
T  14171702 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaaatggaggaatctgaaattacagggaccaaaagtgggaggaatctg 14171801  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | |||||||||||||| || ||||||||||||||||||||  |||||||||||||  ||||||||||       
T  14171802 aaattacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatctaaatcttt 14171901  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  14171902 ttatttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 14171964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 19112881 - 19113143
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  19112881 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggagaaatctgaaattacagggaccaaaagtgggaggaatctg 19112980  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || |||||||||||||||||||  |||| |||||||| |||||||||||||| ||||||||| ||||||||||||   ||||||||||       
T  19112981 aaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatctaaatcttt 19113080  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||||||||| || |||||   ||||||||||||||| ||||||||||||||||    
T  19113081 ttttttacagggactaaaaccggaattcgttaatattatagggacgaaaagaggtatttaccc 19113143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 30500157 - 30500352
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | || |||||||||||||| |||||||||||||||||||||||    
T  30500157 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtgaaggaatttgaaattacatggaccaaaagtgggaggaatctg 30500256  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||| ||||  |||||||||| ||||| | |||||||||||||| |||||||||||||||||| ||| | |||||||||||||  |||||||||    
T  30500257 aaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30500352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 15328722 - 15328462
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  15328722 attccaccacgtcagcagaatctgcatatatgacacgtaaaatgagagaccaaaagtggaggaatttgaaattacagggaccaaaagtgggaggaatctg 15328623  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| |||||||||||||||||||  |||||||||||||||||||||  ||| ||||||||| | |||||||||||||  ||||||| |        
T  15328622 aaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatctaatt---t 15328526  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccca 281  Q
          ||||||||||||| ||||||| || ||||||| ||| ||| |||||||||||||||||    
T  15328525 ttttttacagggactaaaaacgaaatttactaatattacaggaacgaaaagaggtatttaccca 15328462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 19 - 203
Target Start/End: Complemental strand, 21633158 - 21632974
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| || |||||||| ||||||||||| ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  21633158 attccaccacgtaagaagaatctgcatacatggcacataaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctg 21633059  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| |||| |||||||||||||||||||  |||| |||||||| ||||||||||||||| |||||||| |||||||||||||    
T  21633058 aaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggac 21632974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 27 - 194
Target Start/End: Original strand, 4204832 - 4204999
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||  |||||| |||||||||||||||||||||||    
T  4204832 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggagtaatatgaaattacagagaccaatagtgggaggaatctgaaattata 4204931  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaat 194  Q
     ||  ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||    
T  4204932 tggatgtaatttatgcagattctactgacgtgataaaaagagggatcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 45003758 - 45003562
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||||| ||||||||||||| |||||| |||| ||| |||||||||| ||| |||||||||||||||||||    
T  45003758 attccaccacgtaagcagaatctgcatacatggcatgtaaaatgagggatcaaaagtggaggaatatgaaattacagggaacaaaagtgggaggaatctg 45003659  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || |||||||||| ||||||||  ||||||||||||| ||||||| |||||||||||||||| |||||||||||||  ||||||||||    
T  45003658 aaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatctaaatc 45003562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 52552808 - 52553000
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| | |||||||||||||| ||||||| ||||||||||||||||||||||| | || |||||||||||||| |||||||    ||||||||||||    
T  52552808 attccaccatgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtgaaggaatttgaaattacagggaccaa----gggaggaatctg 52552903  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| | ||||||||| |||  ||||||||||    
T  52552904 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatc 52553000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 17465484 - 17465667
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  17465484 attccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattaca-ggaccaaaagtgggaggaatctg 17465582  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| || | ||||||||||| | ||| |  ||||||||||||| ||||||||||||||| ||||||||||| ||||||||||    
T  17465583 aaattacagagacgtaatttatgtaaattttgttgacgtgatgaaaggagggaccaaaagtgaaagaatctaaagttacagggac 17465667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 43572645 - 43572389
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||||| |    
T  43572645 acgtcagcagaatctgcgtaaatgacacgtaaaatgagggaccaaaagtggagtaatttgaaattacagggaccaaaagtgggaggaatatgaaattaca 43572546  T
Q  127 ggggcgtaatttatgcagattctactgac---gtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnn 223  Q
    ||| ||||| || |||||||||| |||||    |||||||| |||||||||||||||||||||||| |||||||||||||  |||||||||             
T  43572545 gggacgtaa-ttgtgcagattctgctgacttgatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatttttctttt 43572447  T
Q  224 nacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     ||||||||||||| |||||||| | ||||||| ||| ||| ||||| ||||||||||    
T  43572446 tacagggactaaaaccgaaattcgctaatattacaggaacgaaaagatgtatttaccc 43572389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 49986790 - 49986594
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| |||||||||| |||||||||||| ||||||||||    
T  49986790 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctg 49986691  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || |||||||||||||||||||| | |  |||||||| ||| |||||||||| ||||||||| |||||||||||||  ||||||||||    
T  49986690 aaattacaaggacgtaatttatgcagattctattaaattgatgaaaggagagaccaaaagtagaagaatctgaaattacagggacaaaatctaaatc 49986594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 27 - 280
Target Start/End: Original strand, 9267099 - 9267352
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||| ||||||||||| |||||| | |||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |    
T  9267099 acgtaagcagaatctgcatacattgtacgtaaaatgagggaccaaaagtggaggaatctgaaattacaaggaccaaaagtgggaggaatctgaaattaca 9267198  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
     || | |||||||||||||||||  |||| |||||||| |||||||||||||| ||||||||| | |||||||||||  ||||||||           ||    
T  9267199 aggacttaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatctaaa-aaatttatatac 9267297  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||||||||||||| ||||| | ||||||| | ||||| ||||||||||||||||    
T  9267298 agggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttaccc 9267352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 16722253 - 16721991
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| | || ||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |||||||||| |||||| ||||||||||||||||    
T  16722253 attccaccatgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccagaagtgggaggaatctg 16722154  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| || | | |||||||||||||||||  |||| ||||||||  ||||||||||||||||||||||| |||||||| ||||  |||||||||        
T  16722153 aaattacagtgacataatttatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatctaaattttt 16722054  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          |||| |||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  16722053 ttttttacagtgactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 16721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 27 - 214
Target Start/End: Complemental strand, 38283804 - 38283617
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| |||| ||||||||||||||||| |||||| |    
T  38283804 acgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacacggacaaaaagtgggaggaatcttaaattaca 38283705  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||| ||||| ||||| ||||||| |||||||||||||| |||||| ||||||||||| ||| | |||||| ||| ||  |||||||||    
T  38283704 gggacgtaacttatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatctaaat 38283617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 20853812 - 20854008
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| || |||||||| ||||||||||||||||||||||||||||||| |||| ||| | ||||||||  ||||| ||||||||||||||||    
T  20853812 attccaccacgtaagtagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctaaaattacagagaccagaagtgggaggaatctg 20853911  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| || | | ||||||||||||||| |  |||| |||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  20853912 aaattacagtgacataatttatgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 20854008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 19 - 215
Target Start/End: Complemental strand, 33372667 - 33372472
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||| || |||||||||||||||| |||||| |||| ||| ||||||||||  ||||||||||||||||||||||    
T  33372667 attccaccacgtcagcagaatctgcatac-tgacacgtaaaatgagggatcaaaagtggaggaatatgaaattacagagaccaaaagtgggaggaatctg 33372569  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| | || | ||||| ||||||||| | |||||||||||||| |||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  33372568 aaattacaaggacttaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatctaaatc 33372472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 47575388 - 47575581
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||| |||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||||| |||| |||| |||||||||| ||    
T  47575388 attccaccacggcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggacaaaaaatgggaggaatttg 47575487  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||| ||||   ||||||||||||||||| |||||||||||||| ||| |||||||||| ||| ||||| ||||||||| |||  |||||||    
T  47575488 aaattacagggatataatttatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaatctaa 47575581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 35995794 - 35995972
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||| |||| ||  |||||||||| |||| |||||||||||||||||     
T  35995794 attccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaacatgaaattacagggacaaaaagtgggaggaatcta 35995893  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattac 197  Q
    ||  || | || ||||||||||||||||||| | ||||||||||||  ||||||||||||||||||||||| |||||||    
T  35995894 aatatacaaggacgtaatttatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaattac 35995972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 70 - 212
Target Start/End: Complemental strand, 11003943 - 11003801
Alignment:
Q  70 aaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagg 169  Q
    ||||| |||| ||| |||||||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||| ||| |  |||| |||||||| || |    
T  11003943 aaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaaggatg 11003844  T
Q  170 gaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||||||||||||||||| |||||||| ||||  |||||||    
T  11003843 gaccaaaagtggaagaatctgaaattacaaggacaaaatctaa 11003801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 4204851 - 4204774
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  4204851 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatc 4204774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 9267118 - 9266975
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  9267118 tatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 9267019  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||| | ||||||| ||||||| ||||||||||||||||    
T  9267018 ccggaattcgctaatattacagggacgaaaagaggtatttaccc 9266975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 214
Target Start/End: Original strand, 43572623 - 43572702
Alignment:
Q  135 atttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||  |||||||||    
T  43572623 atttacgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaat 43572702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 17649222 - 17649322
Alignment:
Q  115 tctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||| |||| |||||||||||||||||||  |||| |||| ||| ||| ||||||| |||||| ||||| |||||||||||||  |||||||||    
T  17649222 tctgaaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaat 17649321  T
Q  215 c 215  Q
    |    
T  17649322 c 17649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 21633131 - 21633274
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||||| |||||||||||||  ||||||||||         | |||||||||||    
T  21633131 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaa 21633230  T
Q  238 tcgaaattcacaaatattatagggacga-aagaggtatttaccc 280  Q
      ||||||| | ||||||| |||||||| || ||||||||||||    
T  21633231 ctgaaattcgctaatattacagggacgagaataggtatttaccc 21633274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 33372640 - 33372782
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || || | |||| ||||||||||||||||| |||||||||||||  ||||||||||         ||||| |||||||    
T  33372640 tatgcagattctgctgacgtggtggaatg-gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaa 33372738  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||| | |||||||  |||||| ||||||||||||||||    
T  33372739 tcgaaattcgctaatattacggggacgaaaagaggtatttaccc 33372782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 50271723 - 50271789
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||||||||| || ||||||||||    
T  50271723 gtccccatgagcttagctcatttggtaagagataatgcatttgtatgcaggggccgtggttcgaacc 50271789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 16722226 - 16722369
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || || || || ||  ||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  16722226 tatgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaa 16722325  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
      ||||||| | ||||||| ||||||| ||||||||||||||||    
T  16722326 ctgaaattcgctaatattacagggacgaaaagaggtatttaccc 16722369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 35995821 - 35995678
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||||| |||||||||||||  ||||||||           |||||||||||||    
T  35995821 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaaaaaaaaattctacagggactaaaa 35995722  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||| | ||||||| ||| ||| ||||||||||||||||    
T  35995721 ccggaattcgctaatattacaggaacgaaaagaggtatttaccc 35995678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 38283785 - 38283861
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| ||||||||||||||  ||||| ||||||||||||||||| |||||| ||||||  |||||||||    
T  38283785 tatgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaat 38283861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 49429454 - 49429520
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||| ||||||||||||||||| ||||||||||||||||||  | |||||||||||    
T  49429454 gtccccatgagcttaactcatttggtaagggataatgcatttgtatgcagggaccagggttcgaacc 49429520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 14171729 - 14171652
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || || |||||| ||||||||||||||| | |||||||||||||  ||||||||||    
T  14171729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatc 14171652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 15328695 - 15328772
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  15328695 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatc 15328772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 20853839 - 20853762
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    ||||||||||||||| ||||| || || |||||||||||||||||||||| | |||||| ||||||  ||||||||||    
T  20853839 tatgcagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatc 20853762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 45003731 - 45003808
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||| ||||||| ||||||||||    
T  45003731 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatc 45003808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 45970150 - 45970294
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnn-acagggactaaa 236  Q
    ||||| |||||| || ||||| || || | || ||||||||||||||||||| |||||||||||||  ||| ||||||          ||||||||||||    
T  45970150 tatgcggattctgcttacgtggtggaatggggaaccaaaagtggaagaatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaa 45970249  T
Q  237 atcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    | |||||||||| ||||||| ||||||| ||||||||||||||||    
T  45970250 accgaaattcactaatattacagggacgaaaagaggtatttaccc 45970294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 14262179 - 14262103
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| |||| ||| || ||  ||||||||||||||||||||||| |||||||||||||  |||||||||    
T  14262179 tatgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaat 14262103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 30500184 - 30500108
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||| | |||||||||||||  |||||||||    
T  30500184 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaat 30500108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 32421340 - 32421408
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||| |||||||||||| ||||||||||| ||||||  | ||||||||||||||||||||||||    
T  32421340 agtccccatgagcttagctcatctggtaagggataatgcataatatatgcaggggtcggggttcgaacc 32421408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 52552835 - 52552758
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| ||||| || || ||  ||||| ||||||||||||||||| |||||||||||||  ||||||||||    
T  52552835 tatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatc 52552758  T

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Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 410 - 462
Target Start/End: Original strand, 43527815 - 43527867
Alignment:
Q  410 ttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaa 462  Q
    ||||||||||||||||||||| ||||||||||||||| ||  |||||||||||    
T  43527815 ttagctcatttggtaagggataatgcatttgtatgcacggaccggggttcgaa 43527867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 45431619 - 45431687
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||| ||||||||||| |||||||||||| |||| | || |||||||||||| |||||||||||    
T  45431619 agtccccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaacc 45431687  T

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Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 36990923 - 36990970
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  36990923 gagggactaaaagtggaagaatctaaaattacagggacagaatctaaa 36990970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 37016363 - 37016410
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    ||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  37016363 gagggactaaaagtggaagaatctaaaattacagggacagaatctaaa 37016410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 14162106 - 14162183
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| ||| | |||||||| || ||  ||||||||||||||||||||||| |||||||| ||||  ||||||||||    
T  14162106 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 14162183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 19112908 - 19112831
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || ||||| || ||  ||||||||||||||||||||| | ||||| |||||||  ||||||||||    
T  19112908 tatgcagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatc 19112831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 400 - 464
Target Start/End: Original strand, 47864631 - 47864696
Alignment:
Q  400 ccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||||||||||||||||||||||| |||||   | | ||||||||| ||||||||||||    
T  47864631 ccccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaacc 47864696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 398 - 462
Target Start/End: Original strand, 50381707 - 50381772
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaa 462  Q
    |||||||| |||||| ||||||||||||||||| |||||   | ||||||||||||||||||||||    
T  50381707 gtccccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaa 50381772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 141 - 213
Target Start/End: Original strand, 35741823 - 35741895
Alignment:
Q  141 gcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    ||||||||| |||| ||| | ||  ||||||| ||||| ||||||||||||||| |||||||| |||||||||    
T  35741823 gcagattctgctgatgtgttcaattgagggactaaaagcggaagaatctaaaatgacagggacataatctaaa 35741895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 436
Target Start/End: Original strand, 46247251 - 46247291
Alignment:
Q  396 tagtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||||| |||||||||||||||||||||||| |||||    
T  46247251 tagtccccatgagcttagctcatttggtaagggataatgca 46247291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 49986763 - 49986823
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | ||||||||    
T  49986763 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattaca 49986823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Original strand, 166781 - 166848
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    |||||| | ||||||||||| |||||||||||| ||||||  | |||||||||| |||||||||||||    
T  166781 gtccccgtgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaacc 166848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 436
Target Start/End: Original strand, 2259149 - 2259188
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||||| |||||||||||||||||||||||| |||||    
T  2259149 agtccccatgagcttagctcatttggtaagggataatgca 2259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 410 - 464
Target Start/End: Original strand, 9489482 - 9489537
Alignment:
Q  410 ttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaacc 464  Q
    |||||||  |||||||||||| ||||||| |||||||||||| |||||||||||||    
T  9489482 ttagctcgcttggtaagggataatgcattatgtatgcaggggccggggttcgaacc 9489537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 436
Target Start/End: Complemental strand, 33528312 - 33528269
Alignment:
Q  393 aactagtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||| |||||||| |||||||||||||||||||||||| |||||    
T  33528312 aacttgtccccatgagcttagctcatttggtaagggataatgca 33528269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 35740930 - 35740883
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    ||||||| |||||||||||||| |||||||||||||||  ||||||||    
T  35740930 gagggactaaaagtggaagaatttaaaattacagggacaaaatctaaa 35740883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 11483606 - 11483644
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  11483606 gtccccatgagcttagctcatttggtaagggataatgca 11483644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 398 - 436
Target Start/End: Original strand, 30162650 - 30162688
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  30162650 gtccccatgagcttagctcatttggtaagggataatgca 30162688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 167 - 282
Target Start/End: Original strand, 5800869 - 5800984
Alignment:
Q  167 agggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-a 265  Q
    ||||||||||||||||||||| | |||||||| ||||  ||||||||||         ||||||||| ||| || ||||| | ||||||| ||||||| |    
T  5800869 agggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggact-aaaccggaattcgctaatattacagggacgaa 5800967  T
Q  266 aagaggtatttacccaa 282  Q
    |||||||||| ||||||    
T  5800968 aagaggtattaacccaa 5800984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 284
Target Start/End: Complemental strand, 19720433 - 19720329
Alignment:
Q  181 gaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttacc 279  Q
    ||||||| | |||||||||||||  ||||||||||         ||||||||||||| || ||||| | ||||||| ||||||| |||||| ||||||||    
T  19720433 gaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttacc 19720334  T
Q  280 caatt 284  Q
    |||||    
T  19720333 caatt 19720329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Original strand, 25165434 - 25165471
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  25165434 tccccatgagcttagctcatttggtaagggataatgca 25165471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 27394510 - 27394567
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||| |||||| |||||||||||| |||||||| ||||||||||  |||||| |||||    
T  27394510 agctaagctcacttggtaagggataatgcatttatatgcaggggctggggtttgaacc 27394567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 213
Target Start/End: Original strand, 32998371 - 32998444
Alignment:
Q  140 tgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    |||| ||||| ||||| || | ||| ||||||| ||||||||| |||||| |||||||||||||  ||||||||    
T  32998371 tgcaaattctgctgacatggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaa 32998444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 280
Target Start/End: Original strand, 35995997 - 35996053
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||||||||||||||| ||||| | ||||||| ||||||| ||||| ||||||||||    
T  35995997 acagggactaaaatcggaattcgctaatattacagggacgaaaagatgtatttaccc 35996053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 39739257 - 39739305
Alignment:
Q  388 aacaaaactagtccccataagcttagctcatttggtaagggatgatgca 436  Q
    ||||||| || | ||||| |||||||||||||||||||||||| |||||    
T  39739257 aacaaaattaattcccatgagcttagctcatttggtaagggataatgca 39739305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 129; Significance: 1e-66; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 22263307 - 22263491
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| | |||||||||||    
T  22263307 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggaccaaaactaggaggaatctg 22263406  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||| |||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||||||| | |||||||||||||    
T  22263407 aaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggac 22263491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 23854798 - 23854977
Alignment:
Q  35 agaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgta 134  Q
    |||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||    
T  23854798 agaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctgaaattacagggacgta 23854897  T
Q  135 atttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||| |||  |||||||||    
T  23854898 atttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatctaaat 23854977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 23806214 - 23806032
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||| |||| ||| |||||||| | |||||||||||||||||||||||    
T  23806214 attccaccacgtcagcaaaatttgcatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctg 23806115  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacaggg 201  Q
    |||||| |||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23806114 aaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaattacaggg 23806032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 280
Target Start/End: Original strand, 17850702 - 17850964
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||| || |||||||||||| |||||| |||| ||| |||||||| | | |||||||||||||||||||||    
T  17850702 attccaccacgtcagcagaatctgcatacatggtacctaaaatgagggatcaaaagtggaggaatctgaaattaaaggaaccaaaagtgggaggaatctg 17850801  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||| |       
T  17850802 aaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaagcatt 17850901  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          |||| |||||||| |||||||| | ||||||| ||||||| ||||||||||||||||    
T  17850902 ttatttacagtgactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 17850964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 19 - 283
Target Start/End: Original strand, 42670835 - 42671100
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| ||| ||  |||||||||||||||||||||||||||||  |||| |||||||||||||| ||||||||| | |||||||||||    
T  42670835 attccaccacgtcagcaaaatttgcttacatggcacgtaaaatgagggaccaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctg 42670934  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||| | ||||||||||||| |||||||||||       
T  42670935 aaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatctaaatcctt 42671034  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggac-gaaagaggtatttacccaat 283  Q
          |||||||||||||  ||||||| | |||| || ||||||  |||||||||||||||||||    
T  42671035 ttttttacagggactaaaactgaaattcgctaatactacagggacaaaaagaggtatttacccaat 42671100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 196
Target Start/End: Original strand, 26560670 - 26560847
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||| |||||||||||||| ||| |||||||||||||||||||    
T  26560670 attccaccacgtcagcagaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatttgaaattacagggatcaaaagtgggaggaatctg 26560769  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatta 196  Q
    |||||| |||| ||||||||||||||||||| |||||||||||||| ||| |||||||||||||||||| | ||||||    
T  26560770 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaatta 26560847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 15106329 - 15106067
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  15106329 attccaccacgtcagcaaaatctgcatacatggcacgtaaaatgagggatcaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 15106230  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| | || | ||||| |||||||||   |||||||||||||| |||||||||||||||||| |||||||||||||||||||  ||||||||||       
T  15106229 aaattacaaggacttaattgatgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatctaaatcttt 15106130  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          ||||||| ||||| |||||||| | |||||||  |||||| |||||| |||||||||    
T  15106129 ttatttacagggattaaaaccgaaattcgctaatattacggggacgaaaagagatatttaccc 15106067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 27 - 267
Target Start/End: Complemental strand, 26136071 - 26135831
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||| ||||||||||| |||||||| ||||||||| |||||||||||| |||| ||| | ||||||||||||||||||||| |||||||||||||||| |    
T  26136071 acgtaagcagaatctgcatacatggtacgtaaaataagggaccaaaagtggaggaatctaaaattacaaggaccaaaagtgagaggaatctgaaattaca 26135972  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
     || |||||||||||||||||||  |||| |||||||| |||||||||||||| ||||||||| |||||||||||||  ||||||||||         ||    
T  26135971 aggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaaatctttttttttac 26135872  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacgaaa 267  Q
    |||||||||||||| ||||| | ||||||| ||||||||||    
T  26135871 agggactaaaatcggaattcgctaatattacagggacgaaa 26135831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 30 - 214
Target Start/End: Complemental strand, 20498996 - 20498813
Alignment:
Q  30 tcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggg 129  Q
    ||||||||||||| |||||| ||||||||||||||||| |||||| ||||| || |||||||||| |||||||||||||||||||| ||||||||||  |    
T  20498996 tcagcagaatctgcatacatagcacgtaaaatgagggatcaaaagtggagtgatctgaaattacagggaccaaaagtgggaggaatatgaaattatattg 20498897  T
Q  130 gcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
     |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  20498896 acgtaatttatgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaa-tacagggacataatctaaat 20498813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 31 - 280
Target Start/End: Complemental strand, 39878352 - 39878103
Alignment:
Q  31 cagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattatagggg 130  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||| |||||||| |||||||| | |||||||||||||||||||| |||||||| ||||     
T  39878352 cagcagaatctgcatatatgacacgtaaaatgagggaccaaaagtggagtaatctgaaattagagggaccaaaagtgggaggaatatgaaattacaggga 39878253  T
Q  131 cgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacaggg 230  Q
    ||||||||||||||||| | ||||| |||||||| ||| |||||||||||||||||||| |||||||||  || ||||||||||          ||||||    
T  39878252 cgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatctaaatatctttttttacaggg 39878153  T
Q  231 actaaaatcgaaattcacaaatattatagggacgaaagaggtatttaccc 280  Q
    ||||||| || ||||| | ||||||| | |||| ||| ||||||||||||    
T  39878152 actaaaaccggaattcgctaatattacaaggacaaaaaaggtatttaccc 39878103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 27 - 280
Target Start/End: Complemental strand, 19251724 - 19251471
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||| |||| ||| |||||||||| ||| ||||||| |||||||| |||||||| |    
T  19251724 acgtcagcagaatctgcatacatggcacgtaaaatgatggaccaaaagtggaggaatatgaaattacagggatcaaaagttggaggaatttgaaattaca 19251625  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnac 226  Q
     |  | ||||||||| | ||||| |||| ||||||||| |||||||||||||||||||||| | |||||||||||||  ||||||||||         ||    
T  19251624 agaacataatttatgtatattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-ttttttttac 19251526  T
Q  227 agggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||| |||||||| | ||||||| ||||||| ||||||||||| ||||    
T  19251525 agggactaaaaccgaaattcgctaatattacagggacgaaaagaggtattaaccc 19251471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 17463353 - 17463160
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| | || ||||||||||| |||||||||| |||||||||||||||||||   ||| ||| | |||||||| |||||||||||||||||||||||    
T  17463353 attccaccatgtaagcagaatctgcatacatggcatgtaaaatgagggaccaaaattagaggaatctaaaattacagggaccaaaagtgggaggaatctg 17463254  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||| |||| |||||||||||||||||||  |||| |||||||| |||||||||||||||| |||| || |||||||||||||  |||||||    
T  17463253 aaattacagggacgtaatttatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatctaa 17463160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 34 - 203
Target Start/End: Original strand, 13284539 - 13284708
Alignment:
Q  34 cagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgt 133  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| | || ||| |||||||||| |||||||||||||||||||||| |||||| | || |||    
T  13284539 cagaatctgcatacatgacacgtgaaatgagggaccaaaagtgaagaaatatgaaattacagggaccaaaagtgggaggaatcttaaattacaaggacgt 13284638  T
Q  134 aatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||| |||||||  ||||||| | ||| ||||||||||||||||| |||||| |||||||| ||||    
T  13284639 aatttatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaattacaaggac 13284708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 37 - 214
Target Start/End: Complemental strand, 33290293 - 33290116
Alignment:
Q  37 aatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaat 136  Q
    |||||| ||||||||| | | ||||||||||||||||| ||||  || |||||||||| |||||||||| |||||||||||||||||| |||| || |||    
T  33290293 aatctgcatacatggctcatgaaatgagggaccaaaagtggaggtatctgaaattacagggaccaaaagggggaggaatctgaaattacagggacgaaat 33290194  T
Q  137 ttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||||||||||| |||||||| | |||  |||||||||||||||| || | | |||||||| ||||  |||||||||    
T  33290193 ttatgcagattctgctgacgtggttaaataagggaccaaaagtggaggagtatgaaattacaaggacagaatctaaat 33290116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 96 - 203
Target Start/End: Complemental strand, 26236311 - 26236205
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||| |||||| |||||||| |||| ||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||| |||||    
T  26236311 ggaccaaaagtgg-aggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaatt 26236213  T
Q  196 acagggac 203  Q
    ||||||||    
T  26236212 acagggac 26236205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 138 - 267
Target Start/End: Complemental strand, 26560697 - 26560570
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||||| |||||||||||||| ||||||||||         |||||||||||||    
T  26560697 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggactaaatctaaatc--tttttttacagggactaaaa 26560600  T
Q  238 tcgaaattcacaaatattatagggacgaaa 267  Q
    |||||||||   ||||||| ||||||||||    
T  26560599 tcgaaattcgttaatattacagggacgaaa 26560570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 26236357 - 26236277
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggac 99  Q
    ||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||    
T  26236357 attccaccacgtaagcagaatctgcatacatggcacgtaaaatgagggaccaaaagtggaggaatatgaaattacagggac 26236277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 138 - 283
Target Start/End: Original strand, 23806187 - 23806333
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||| ||| | |||||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  23806187 tatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 23806286  T
Q  238 tcgaaattcacaaatattatagggac-gaaagaggtatttacccaat 283  Q
     |||||||| | ||||||| ||||||  |||||||||||||||||||    
T  23806287 ccgaaattcgctaatattacagggacaaaaagaggtatttacccaat 23806333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 138 - 282
Target Start/End: Original strand, 15106302 - 15106445
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||| | |||||||| || || |||||| ||||||||||||||||| |||||||||||||  |||||||||          |||||||||||||    
T  15106302 tatgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaat--ttttttttacagggactaaaa 15106399  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
    ||||||||| | |||||||  |||||| ||||||||||||||||||    
T  15106400 tcgaaattcgctaatattacggggacgaaaagaggtatttacccaa 15106445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 138 - 282
Target Start/End: Complemental strand, 17850729 - 17850585
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| || || |||||| ||||||||||||||||| ||||||||| |||  ||||||||||         | |||||||||||    
T  17850729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatc-ttttttttatagggactaaaa 17850631  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
    ||| ||||| | ||||||| ||||||| ||||||||||||||||||    
T  17850630 tcggaattcgctaatattacagggacgaaaagaggtatttacccaa 17850585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 43684270 - 43684338
Alignment:
Q  396 tagtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||  | ||||||||||    
T  43684270 tagtccccatgagcttagctcatttggtaagggataatgcatttgtatgcaggggctgaggttcgaacc 43684338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 19251705 - 19251847
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||| ||||| |||||||| ||||||||||||| | |||||||| ||||  ||||||||||         |||||||||||||    
T  19251705 tatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatc-ttttttttacagggactaaaa 19251803  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||||| ||||||| | ||||| ||||||||||||||||    
T  19251804 ccggaattcactaatattacaaggacgaaaagaggtatttaccc 19251847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 142 - 282
Target Start/End: Complemental strand, 34548712 - 34548572
Alignment:
Q  142 cagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcga 241  Q
    ||||||||||||||||||||||| ||| ||||||| |||||| ||| | |||||||| ||||  ||||||||||         ||||||||||||| | |    
T  34548712 cagattctactgacgtgatgaaaggagtgaccaaaggtggaacaatatgaaattacatggacaaaatctaaatc-ttttttttacagggactaaaaccaa 34548614  T
Q  242 aattcacaaatattatagggacg-aaagaggtatttacccaa 282  Q
    ||||||| ||||||| ||||||| ||||| ||||||||||||    
T  34548613 aattcactaatattacagggacgaaaagaagtatttacccaa 34548572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 26236330 - 26236472
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||| ||||||||||| |||||||||||||  ||||||||||          || |||||||||    
T  26236330 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatcttttttttc-caaggactaaaa 26236428  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     |||||||| | ||||||| ||||||| ||||||||||||||||    
T  26236429 ccgaaattcgctaatattacagggacgaaaagaggtatttaccc 26236472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 20498980 - 20499057
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||| ||| ||||| || |||||||||||| |||||||| |||||||||||||  ||||||||||    
T  20498980 tatgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatc 20499057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22263334 - 22263257
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || ||  ||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  22263334 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc 22263257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 396 - 464
Target Start/End: Original strand, 24202141 - 24202210
Alignment:
Q  396 tagtccccataagcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| | ||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||    
T  24202141 tagtccccgtgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaacc 24202210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 172 - 282
Target Start/End: Complemental strand, 23854797 - 23854686
Alignment:
Q  172 ccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagag 270  Q
    |||||||||||||||| | |||||||||||||  ||||||||||         ||||||||||||| |||||||| | ||||||| ||||||| ||||||    
T  23854797 ccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggacgaaaagag 23854698  T
Q  271 gtatttacccaa 282  Q
    ||||| ||||||    
T  23854697 gtattaacccaa 23854686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 152 - 280
Target Start/End: Complemental strand, 13254626 - 13254497
Alignment:
Q  152 tgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaa 251  Q
    ||||||||||||| |||| |||||||||| |||||||| |||||||| ||||  ||||||||||         ||||||| ||||| | |||||| | ||    
T  13254626 tgacgtgatgaaaggaggaaccaaaagtgaaagaatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaaccaaaattcgctaa 13254527  T
Q  252 tattatagggac-gaaagaggtatttaccc 280  Q
    ||||| ||| || |||||||||||||||||    
T  13254526 tattacaggaacggaaagaggtatttaccc 13254497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 39878337 - 39878402
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||||| ||| |||| ||||| ||||||||||||||| || ||||| |||||||||||||    
T  39878337 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 17463326 - 17463469
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || || || || || |||||| ||||||||||||||| |  ||||||||||||  ||||||||||         |||||||||||||    
T  17463326 tatgcagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaa 17463425  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     || ||||| | ||||||| |||| || ||||||||||||||||    
T  17463426 ccggaattcgctaatattacaggggcgaaaagaggtatttaccc 17463469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 99
Target Start/End: Original strand, 30390575 - 30390655
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggac 99  Q
    ||||||| |||| |||| |||||| |||||| |||||||||||||||||||||||  | || ||| |||||||||| ||||    
T  30390575 attccaccacgtaagcaaaatctgcatacatagcacgtaaaatgagggaccaaaaatgaaggaatctgaaattacagggac 30390655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 32 - 79
Target Start/End: Complemental strand, 13254685 - 13254638
Alignment:
Q  32 agcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggag 79  Q
    ||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  13254685 agcagaatcagtatacatgacacgtaaaatgagggaccaaaagtggag 13254638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 398 - 441
Target Start/End: Complemental strand, 41541617 - 41541574
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgcatttgt 441  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  41541617 gtccccatgagcttagctcatttggtaagggataatgcatttgt 41541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 30390602 - 30390528
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||||||| | || ||||| || || |||||||||||||||||||||| | |||||||||||||  |||||||    
T  30390602 tatgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 30390528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Complemental strand, 13284551 - 13284486
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||||||||||||  || |||| ||||| ||||||| |||||||||||||| | |||||||||||||    
T  13284551 tatgcagattctgttgtcgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggac 13284486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 396 - 463
Target Start/End: Complemental strand, 12183839 - 12183771
Alignment:
Q  396 tagtccccataagcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaac 463  Q
    |||||||||| | |||| |||| ||||||||| || ||||||| ||||||||||||||||| |||||||    
T  12183839 tagtccccatgaacttacctcacttggtaaggaataatgcattatgtatgcaggggtcgggattcgaac 12183771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 160 - 200
Target Start/End: Original strand, 13254693 - 13254733
Alignment:
Q  160 tgaaaagagggaccaaaagtggaagaatctaaaattacagg 200  Q
    ||||| |||||||||||||||||||||||| ||||||||||    
T  13254693 tgaaatgagggaccaaaagtggaagaatctgaaattacagg 13254733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 32084841 - 32084905
Alignment:
Q  401 cccataagcttagctcatttggtaagggatgatgcat-ttgtatgcaggggtcggggttcgaacc 464  Q
    ||||| |||||||||||||||||||||||  |||||| || |||| ||||| |||||||||||||    
T  32084841 cccatgagcttagctcatttggtaagggacaatgcatattatatgtaggggccggggttcgaacc 32084905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 21482143 - 21482190
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    ||||||| ||||||||||||||||||||| ||||||||  ||||||||    
T  21482143 gagggactaaaagtggaagaatctaaaatgacagggacaaaatctaaa 21482190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 44098894 - 44098933
Alignment:
Q  175 aaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||||||||||||| ||||||||||||| ||||||||||    
T  44098894 aaagtggaagaatctgaaattacagggacataatctaaat 44098933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 203
Target Start/End: Original strand, 23047848 - 23047885
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||  |||||||||||||||||||||||||||||    
T  23047848 gagggactcaaagtggaagaatctaaaattacagggac 23047885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 25783306 - 25783249
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||| ||||| |||||| |||||| | |||||||||||  |||||||||||    
T  25783306 agcttagctcacttggtgagggataatgcatatatatgcaggggttagggttcgaacc 25783249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 26136052 - 26136129
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || |||||||| || ||| || ||||||||||||||| | ||||||||  |||  ||||||||||    
T  26136052 tatgcagattctgcttacgtgatggaacgagagatcaaaagtggaagaatatgaaattacaatgacaaaatctaaatc 26136129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 464
Target Start/End: Original strand, 29090418 - 29090475
Alignment:
Q  407 agcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||||| || |||||||| |||||||| ||| |||||| ||| |||||||||    
T  29090418 agcttagctcatatgataagggataatgcatttatatacaggggccggagttcgaacc 29090475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 401 - 464
Target Start/End: Complemental strand, 18949783 - 18949719
Alignment:
Q  401 cccataagcttagctcatttggtaagggatgatgcatt-tgtatgcaggggtcggggttcgaacc 464  Q
    ||||| |||||| |||||||| ||| |||| ||||||| | | ||||||||||||||||||||||    
T  18949783 cccatgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaacc 18949719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 33290284 - 33290344
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||||||| |  ||||||| |||||  ||||||||||||||||||||| | ||||||||    
T  33290284 tatgcagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattaca 33290344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 125; Significance: 3e-64; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 19 - 281
Target Start/End: Complemental strand, 9481444 - 9481181
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| ||||||||| ||| || |||||||||||| |||||||||||| ||||  |||| |||||||||||||| ||||||||| | |||||||||||    
T  9481444 attccaccacgtcagcaaaatttgcatacatggcacgcaaaatgagggacaaaaaatggaggaatttgaaattacagggaccaaaactaggaggaatctg 9481345  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||  ||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||| | ||||||||||||| |||||||||||       
T  9481344 aaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatctaaatcctt 9481245  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccca 281  Q
          ||||||||||||| || ||||| | ||||||| ||||||| |||||||||||||||||    
T  9481244 ttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccca 9481181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 19 - 214
Target Start/End: Complemental strand, 30618223 - 30618029
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||||  || |||||||||||| ||||||    
T  30618223 attccaccacgtcagcagaatctacatacatggcacgtaaaatgagggaccaaaagtggaggaatttgaaattacagtgatcaaaagtgggag-aatctg 30618125  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||| |||| ||||||||||||||||||| |||||||||| ||| |||||||||||||||||| ||| | |||||||||||||  |||||||||    
T  30618124 aaattacagggacgtaatttatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatctaaat 30618029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 203
Target Start/End: Original strand, 2299426 - 2299609
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| |||||||| |||||||||||||||||||||||||||||||||| || | ||| | ||||||||||||||||||||||||||||||||    
T  2299426 attccaccacgtaagcagaatatgtatacatggcacgtaaaatgagggaccaaaagtggcggaatctaaaattacaaggaccaaaagtgggaggaatctg 2299525  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    ||| || |||| |||||||||||||||||||  |||| |||||||| ||||||  |||||||||||||||| |||||||||||||    
T  2299526 aaa-tacagggacgtaatttatgcagattctgttgacttgatgaaaggagggataaaaagtggaagaatctgaaattacagggac 2299609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 24732200 - 24732007
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| |||||||| | |||||||||||||||||||||||    
T  24732200 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattatagggaccaaaagtgggaggaatctg 24732101  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    |||||| | || ||||||||||| ||||| |  |||| |||||||| |||||||||||||| ||||||||| |||||||||||||  |||||||    
T  24732100 aaattacaaggacgtaatttatgtagattatgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 24732007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 27 - 198
Target Start/End: Original strand, 30459025 - 30459196
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| ||||||||||||| || |||||| | | |||| ||||||||||||||||||||||||||||||| ||||||||||    
T  30459025 acgtcagcagaatctgcatacatgacacgtaaaatgagagatcaaaagtgaaataatctgaaattacaaggaccaaaagtgggaggaatttgaaattata 30459124  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    ||| ||||||||||| ||||| | || ||||||||||| ||| ||||||||||| |||||||| ||||||||    
T  30459125 gggacgtaatttatggagattatgctaacgtgatgaaaggagagaccaaaagtgaaagaatctgaaattaca 30459196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 27 - 208
Target Start/End: Original strand, 10321854 - 10322036
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaagg-ggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattat 125  Q
    |||||||||| ||||| |||||||||||||||||| |||| | ||||   |||||||| |||||||||| | |||||||||||||||||||||||||||     
T  10321854 acgtcagcagtatctgcatacatggcacgtaaaataaggggctaaaaattggagtaatctgaaattacatgaaccaaaagtgggaggaatctgaaattac 10321953  T
Q  126 aggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaat 208  Q
    | || ||||||||||||||||||| |||||||||||||| || |||||||||||| |||||||| ||||||||||||| ||||    
T  10321954 aaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggacataat 10322036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 26385394 - 26385649
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||| ||||||||| |||||||||| ||    
T  26385394 attccaccacgtaagcagaatctgtatacatggcacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaactgggaggaatatg 26385493  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||| ||||||||| |||    |||| |||||||| ||| |||||||||||||||||| | ||||| |||| ||   |||||||||       
T  26385494 aaattacagggacgt-atttatgcatatt---atgacttgatgaaaggagagaccaaaagtggaagaatatgaaattgcaggaacaacatctaaatcttt 26385589  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtattta 277  Q
          |||||||||||||||| ||||| | ||||||| ||||||| |||||||||||||    
T  26385590 gtttttacagggactaaaatcggaattcgctaatattacagggacgaaaagaggtattta 26385649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 32 - 256
Target Start/End: Original strand, 3229992 - 3230215
Alignment:
Q  32 agcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggc 131  Q
    ||||||||||| |||||||  || ||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||| |||| |    
T  3229992 agcagaatctgcatacatgaaacataaaatgagggaccaaaagtggaggaatatgaaattacaaggaccaaaagtgggaggaatatgaaattacagggac 3230091  T
Q  132 gtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacaggga 231  Q
    || |||||||||||||||  ||||||||||||||||  ||||||||||| |||||| | |||||| | ||||  ||||||||||         |||||||    
T  3230092 gtgatttatgcagattctgttgacgtgatgaaaaga-tgaccaaaagtgaaagaatatgaaattatatggacaaaatctaaatcttttattttacaggga 3230190  T
Q  232 ctaaaatcgaaattcacaaatatta 256  Q
    ||||||||| ||||| | |||||||    
T  3230191 ctaaaatcggaattcgctaatatta 3230215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 27 - 195
Target Start/End: Original strand, 14681006 - 14681174
Alignment:
Q  27 acgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattata 126  Q
    |||||||||||||||| ||||||| ||||| ||| ||| ||||||||| |||| ||| |||||||| | |||||||||||| ||| |||||||||||| |    
T  14681006 acgtcagcagaatctgcatacatgacacgtgaaaagagagaccaaaagtggagaaatctgaaattatatggaccaaaagtgagagtaatctgaaattaca 14681105  T
Q  127 ggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||| |||||| | ||||||||||||||||||  | |||  |||||||||||||||| ||||||||||||    
T  14681106 gggacgtaatatgtgcagattctactgacgtagttaaataagggaccaaaagtggaggaatctaaaatt 14681174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 33637744 - 33637625
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||    
T  33637744 ggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaatt 33637645  T
Q  196 acagggacttaatctaaatc 215  Q
    ||| | ||  ||||||||||    
T  33637644 acaagaacaaaatctaaatc 33637625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 19 - 149
Target Start/End: Original strand, 33714603 - 33714733
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| ||||||||||  ||||||||||| ||||||||||    
T  33714603 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagagaccaaaagtgagaggaatctg 33714702  T
Q  119 aaattataggggcgtaatttatgcagattct 149  Q
    |||||| | || |||||||||||||||||||    
T  33714703 aaattacaaggacgtaatttatgcagattct 33714733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 96 - 280
Target Start/End: Original strand, 32017698 - 32017881
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||| |||||| |||||||| ||||  |||||||||||| ||||  |||||||||||||| |||||||||||||||||||||| | |||||    
T  32017698 ggaccaaaagtgg-aggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 32017796  T
Q  196 acagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||  ||||||||||         ||||||||||||| || ||||| | ||||||| ||||||| |||||| |||||||||    
T  32017797 acagggacaaaatctaaatc-ttttttttacagggactaaaaccggaattcgctaatattacagggacgaaaagagatatttaccc 32017881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 63 - 197
Target Start/End: Original strand, 18500506 - 18500641
Alignment:
Q  63 agggaccaaaaggggagtaatttgaaa-ttacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatg 161  Q
    |||||||||||| |||| ||| | ||| ||||| ||||||||||||| | | ||||||||||| |||| | |||||||||||||||||  || | |||||    
T  18500506 agggaccaaaagtggaggaatctaaaaattacagggaccaaaagtggaaaggatctgaaattacagggacataatttatgcagattctgttgccttgatg 18500605  T
Q  162 aaaagagggaccaaaagtggaagaatctaaaattac 197  Q
    ||| ||||||||||||||||||||||||||||||||    
T  18500606 aaaggagggaccaaaagtggaagaatctaaaattac 18500641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 17142798 - 17142916
Alignment:
Q  63 agggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatga 162  Q
    |||||||||||| |||| ||| |||||||||| |||||||||||| |||||||||||||||| |||| | |||||||| |||| |||| ||||||| | |    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggaccaaaagtgagaggaatctgaaattacagggacctaatttatacagaatctattgacgtggtta 17142897  T
Q  163 aaagagggaccaaaagtgga 182  Q
    ||| | ||||||||||||||    
T  17142898 aaa-aaggaccaaaagtgga 17142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 138 - 280
Target Start/End: Complemental strand, 18500457 - 18500315
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||||||||  ||||||||||         |||||||||||||    
T  18500457 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatc-tttttcttacagggactaaaa 18500359  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
     |||||||| | ||||||||||||||| ||||||||||||||||    
T  18500358 ccgaaattcgctaatattatagggacgaaaagaggtatttaccc 18500315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 32017652 - 32017727
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattaca 94  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||| |||| ||||||||||||||    
T  32017652 attccaccacgtcagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatttgaaattaca 32017727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 18500430 - 18500528
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaat-ttgaaattacaaggaccaaaagtgggaggaatct 117  Q
    ||||||| |||| ||||||||||| ||||||| ||||||||||||||||||||||| |||| ||| |  |||||||| ||||||||||| ||||||||||    
T  18500430 attccaccacgtaagcagaatctgcatacatgacacgtaaaatgagggaccaaaagtggaggaatctaaaaattacagggaccaaaagt-ggaggaatct 18500528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 19 - 99
Target Start/End: Complemental strand, 33637790 - 33637709
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaag-gggagtaatttgaaattacaaggac 99  Q
    ||||||| |||||||||||||||| ||||||  ||||||||||||||||||||||| ||||| ||| |||||||||| ||||    
T  33637790 attccaccacgtcagcagaatctgcatacataacacgtaaaatgagggaccaaaagtgggaggaatctgaaattacagggac 33637709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 152 - 215
Target Start/End: Complemental strand, 19284258 - 19284195
Alignment:
Q  152 tgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||| |||||||| |||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  19284258 tgacatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatc 19284195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 397 - 464
Target Start/End: Original strand, 24466824 - 24466891
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||||||||||||||||||| | |||| |||||| | |||||||||| |||||||||||||    
T  24466824 agtccccataagcttagctcatttggtgaaggataatgcatatatatgcaggggacggggttcgaacc 24466891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 215
Target Start/End: Complemental strand, 26385417 - 26385344
Alignment:
Q  142 cagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||| || ||||| || || |||||||||||||||||||||| |||||||||||||||  ||||||||||    
T  26385417 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatc 26385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 30459044 - 30458967
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| ||||| ||| ||| |||||| ||||||||| ||||||||| ||| |||||||||||    
T  30459044 tatgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaatc 30458967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 9854122 - 9854198
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||||||||| | |||||||| ||||| |||||||||||||||||||||| | |||||||| ||||  |||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaat 9854198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 138 - 280
Target Start/End: Original strand, 24732173 - 24732315
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||| ||||  ||||||||||         ||||||||| |||    
T  24732173 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggact-aaa 24732271  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    | | ||||| | ||||||| ||||||| ||||||||||||||||    
T  24732272 ttggaattcgctaatattacagggacgaaaagaggtatttaccc 24732315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 33714630 - 33714553
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  33714630 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 33714553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 14681025 - 14680965
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||||||||| |||||||| ||||| || ||||||||||||||||||| | ||||||||    
T  14681025 tatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattaca 14680965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 30618196 - 30618272
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||| ||||||| |||||||| || ||  || ||| ||||||||||||||||||||||||||||||  |||||||||    
T  30618196 tatgtagattctgctgacgtggtggaataagagacaaaaagtggaagaatctaaaattacagggacaaaatctaaat 30618272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 417 - 464
Target Start/End: Original strand, 9455852 - 9455899
Alignment:
Q  417 atttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||    
T  9455852 atttggtaagggataatgcatttgtatgtaggggtcggagttcgaacc 9455899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 10321873 - 10321799
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaa 212  Q
    ||||||||| || |||||||| ||||| |||||| |||||||| |||||| | ||||||||||||  ||||||||    
T  10321873 tatgcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaattacagggatataatctaa 10321799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 160 - 214
Target Start/End: Complemental strand, 17142798 - 17142744
Alignment:
Q  160 tgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    ||||| ||| |||||||||||||||||| | ||||||||||||| ||||||||||    
T  17142798 tgaaacgagagaccaaaagtggaagaatttgaaattacagggacataatctaaat 17142744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 9481417 - 9481494
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||| ||| | |||||||| || ||  ||||||||||||||||||||||| |||||||| ||||  ||||||||||    
T  9481417 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatc 9481494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 138 - 203
Target Start/End: Original strand, 33637763 - 33637828
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||||| |||||||| || || |||||| |||||||| |||||| | |||||||||||||    
T  33637763 tatgcagattctgctgacgtggtggaatgagggatcaaaagtgaaagaatatgaaattacagggac 33637828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Complemental strand, 32017679 - 32017619
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    |||||||||||| |||||||| || ||  | ||||||||||||||||||||| ||||||||    
T  32017679 tatgcagattctgctgacgtggtggaataaaggaccaaaagtggaagaatctgaaattaca 32017619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 6228362 - 6228295
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  6228362 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 6228295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 409 - 464
Target Start/End: Original strand, 7164699 - 7164754
Alignment:
Q  409 cttagctcatttggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    ||||||||||||| |||||||| |||||||| |||| ||||| ||| |||||||||    
T  7164699 cttagctcatttgataagggataatgcatttatatgtaggggccggagttcgaacc 7164754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 275
Target Start/End: Complemental strand, 9154990 - 9154884
Alignment:
Q  171 accaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatcgaaattcac-aaatattatagggacg-aaag 268  Q
    ||||||| ||||||||||| |||||||||||||  ||||||||||         |||||||||||||||| ||||| | |||||||| ||||| | ||||    
T  9154990 accaaaactggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaatattacagggaggaaaag 9154891  T
Q  269 aggtatt 275  Q
    |||||||    
T  9154890 aggtatt 9154884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 464
Target Start/End: Complemental strand, 15717115 - 15717048
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggatgatgca-tttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||| |||||||||||||||||||||||| |||||   | | |||||||| |||||||||||||    
T  15717115 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaacc 15717048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 4096666 - 4096618
Alignment:
Q  397 agtccccataagcttagctcatttggtaagggatgatgcatttgtatgca 446  Q
    |||| |||| ||||||||||||||||||||||||  ||||||||||||||    
T  4096666 agtctccatgagcttagctcatttggtaagggat-ttgcatttgtatgca 4096618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 400 - 437
Target Start/End: Original strand, 17216953 - 17216990
Alignment:
Q  400 ccccataagcttagctcatttggtaagggatgatgcat 437  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  17216953 ccccatgagcttagctcatttggtaagggataatgcat 17216990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 436
Target Start/End: Complemental strand, 21874322 - 21874285
Alignment:
Q  399 tccccataagcttagctcatttggtaagggatgatgca 436  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  21874322 tccccataagcttaactcatttggtaagggataatgca 21874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 203
Target Start/End: Original strand, 17142798 - 17142834
Alignment:
Q  167 agggaccaaaagtggaagaatctaaaattacagggac 203  Q
    |||||||||||||||| |||||| |||||||||||||    
T  17142798 agggaccaaaagtggaggaatctgaaattacagggac 17142834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Original strand, 18500655 - 18500707
Alignment:
Q  229 ggactaaaatcgaaattcacaaatattatagggacgaaa-gaggtatttaccc 280  Q
    ||||||||| |||||||| | ||||||| |||||||||| |||||||||||||    
T  18500655 ggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 18500707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 24731991 - 24731935
Alignment:
Q  225 acagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    ||||||||||||| || ||||| | ||||||| ||||||| ||||||||||||||||    
T  24731991 acagggactaaaaccggaattcgctaatattacagggacgaaaagaggtatttaccc 24731935  T

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Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 280
Target Start/End: Complemental strand, 30618019 - 30617967
Alignment:
Q  229 ggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    |||||||||||  ||||||| ||||||| ||||||| ||||||||||||||||    
T  30618019 ggactaaaatcagaattcactaatattacagggacgaaaagaggtatttaccc 30617967  T

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Target: scaffold0361 (Bit Score: 117; Significance: 2e-59; HSPs: 2)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 4825 - 4562
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||| ||||||||||| |||||||| |||||||||||||||||||||| |||| ||| |||||||||| |||||||||||||||||||||||    
T  4825 attccaccacgtaagcagaatctgcatacatggtacgtaaaatgagggaccaaaagtggaggaatctgaaattacagggaccaaaagtgggaggaatctg 4726  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc-nn 217  Q
    |||||| | || |||||||||||||||||||  |||| |||| ||| |||||||||||||| ||||||||| |||||||||||||  ||| ||||||       
T  4725 aaattacacggacgtaatttatgcagattctgttgacttgataaaaggagggaccaaaagtagaagaatctcaaattacagggacaaaatttaaatcttt 4626  T
Q  218 nnnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
           |||||||||||||||| ||||| | ||||||| | ||||| ||||||||||||||||    
T  4625 tttttttacagggactaaaatcggaattcgctaatattacaaggacgaaaagaggtatttaccc 4562  T

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Target: scaffold0361; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 4798 - 4875
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| || ||||| || || |||||||||||||||||||||| | |||||||| ||||  ||||||||||    
T  4798 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatc 4875  T

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Target: scaffold0141 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 19 - 280
Target Start/End: Complemental strand, 8584 - 8325
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||||| |||||||  |||| ||| ||||||||||||||||||||||||||||||||||    
T  8584 attccaccacgtcagcagaatctgcatacatgacacgtaaaatgagg-accaaaaatggaggaatctgaaattacaaggaccaaaagtgggaggaatctg 8486  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnn 218  Q
    |||||| |||| ||||||| ||||||||| |  ||||||||||||| ||| ||||||||||| ||||||||   ||||| |||||  ||||||||||       
T  8485 aaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagagaccaaaagtgaaagaatct--gattactgggacaaaatctaaatcttt 8388  T
Q  219 nnnnnnacagggactaaaatcgaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
          || |||||||||| |||||||| | ||||||| ||||||| ||||||||||||||||    
T  8387 ttatttacggggactaaaaccgaaattcgctaatattacagggacgaaaagaggtatttaccc 8325  T

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Target: scaffold0141; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 8557 - 8634
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||||||| |||||||| || || ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  8557 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatc 8634  T

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Target: scaffold0185 (Bit Score: 102; Significance: 2e-50; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 29 - 198
Target Start/End: Original strand, 3995 - 4164
Alignment:
Q  29 gtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctgaaattatagg 128  Q
    |||||||||||||| | |||||||| |||||||||||||||||||| |||| ||| ||||||||||  |||||||||||||||||||||||||||| ||     
T  3995 gtcagcagaatctgcacacatggcaagtaaaatgagggaccaaaagtggaggaatatgaaattacagtgaccaaaagtgggaggaatctgaaattacaga 4094  T
Q  129 ggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattaca 198  Q
    | | ||||||||||||||||| |||||||||||||| |||||||||||| || |||||||| ||||||||    
T  4095 gacataatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattaca 4164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 280
Target Start/End: Complemental strand, 4010 - 3869
Alignment:
Q  140 tgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaatc 239  Q
    |||||||||| ||||| || ||||| ||| |||||| ||||||||||| | ||||||||||||| |||||||||||         ||||||||||||| |    
T  4010 tgcagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaacc 3911  T
Q  240 gaaattcacaaatattatagggacg-aaagaggtatttaccc 280  Q
    | ||||| | ||||||| ||||||| |||||| |||||||||    
T  3910 ggaattcgctaatattacagggacgaaaagagatatttaccc 3869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 197
Target Start/End: Original strand, 336 - 513
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaaggggagtaatttgaaattacaaggaccaaaagtgggaggaatctg 118  Q
    ||||||| || | |||||||| || |||||||| ||||||||||||||||||||||  ||| ||| |||||||||| |||||||||  ||||||||||||    
T  336 attccaccacataagcagaatttgcatacatggtacgtaaaatgagggaccaaaagtagaggaatctgaaattacagggaccaaaatcgggaggaatctg 435  T
Q  119 aaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattac 197  Q
    |||||| |  | ||||||||||||||||||| |||| ||||| ||| |||  ||||||||||||| ||||| |||||||    
T  436 aaattaca-agacgtaatttatgcagattctgctgatgtgattaaaggagataccaaaagtggaataatctgaaattac 513  T

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Target: scaffold0176 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 81 - 203
Target Start/End: Original strand, 15811 - 15932
Alignment:
Q  81 aatttgaaattacaaggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtg 180  Q
    ||||||||||||||  |||||||||||||||||||||||||||| || |   ||||||||||||||||| |||||||||||||| ||| |||||||||||    
T  15811 aatttgaaattacagagaccaaaagtgggaggaatctgaaattacagcgta-taatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtg 15909  T
Q  181 gaagaatctaaaattacagggac 203  Q
     |||||| | |||||||||||||    
T  15910 aaagaatatgaaattacagggac 15932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 96 - 215
Target Start/End: Original strand, 7392 - 7511
Alignment:
Q  96 ggaccaaaagtgggaggaatctgaaattataggggcgtaatttatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaatt 195  Q
    ||||||||||||| ||||||||||||||| | ||  |||||||||||||||| |  |||| |||||||| ||  |||||||||| ||||||||| |||||    
T  7392 ggaccaaaagtggtaggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaatt 7491  T
Q  196 acagggacttaatctaaatc 215  Q
    ||||||||  ||||||||||    
T  7492 acagggacaaaatctaaatc 7511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 7371 - 7426
Alignment:
Q  44 atacatggcacgtaaaatgagggaccaaaag-gggagtaatttgaaattacaagga 98  Q
    |||||||| |||||||||||||||||||||| || || ||| ||||||||||||||    
T  7371 atacatggtacgtaaaatgagggaccaaaagtggtaggaatctgaaattacaagga 7426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 7341 - 7292
Alignment:
Q  166 gagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatc 215  Q
    |||||||| ||||||||||||| | |||||||||||||  ||||||||||    
T  7341 gagggaccgaaagtggaagaatatgaaattacagggacaaaatctaaatc 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 138 - 275
Target Start/End: Original strand, 12217 - 12355
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaatcnnnnnnnnnacagggactaaaa 237  Q
    |||||||||||| |||||||||||||| || ||||||||||||||||||||| |||||||||||||  ||||||||||         | |||||||||||    
T  12217 tatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaa 12316  T
Q  238 tcgaaattcacaaatattatagggacg-aaagaggtatt 275  Q
     || ||||| | ||||||| ||||||| |||||||||||    
T  12317 ccggaattcgctaatattacagggacgaaaagaggtatt 12355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 49; Significance: 7e-19; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 4983 - 5059
Alignment:
Q  138 tatgcagattctactgacgtgatgaaaagagggaccaaaagtggaagaatctaaaattacagggacttaatctaaat 214  Q
    |||| ||||||| || ||||| || || ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4983 tatgtagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggactaaatctaaat 5059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 5010 - 4924
Alignment:
Q  19 attccactacgtcagcagaatctgtatacatggcacgtaaaatgagggaccaaaag-gggagtaatttgaaattacaaggaccaaaa 104  Q
    ||||||| |||| ||||||||||  ||||||||||||||||||||||||||||||| ||||| ||| |||||||||| |||| ||||    
T  5010 attccaccacgtaagcagaatctacatacatggcacgtaaaatgagggaccaaaagtgggagaaatatgaaattacatggactaaaa 4924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 421 - 464
Target Start/End: Complemental strand, 15409 - 15366
Alignment:
Q  421 ggtaagggatgatgcatttgtatgcaggggtcggggttcgaacc 464  Q
    |||||||||| |||||| | ||||||||||||||||||||||||    
T  15409 ggtaagggataatgcatatttatgcaggggtcggggttcgaacc 15366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 4781 - 4735
Alignment:
Q  167 agggaccaaaagtggaagaatctaaaattacagggacttaatctaaa 213  Q
    |||||||||||||||| |||||| |||||||||||||  ||||||||    
T  4781 agggaccaaaagtggaggaatctgaaattacagggacagaatctaaa 4735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 398 - 430
Target Start/End: Original strand, 419705 - 419737
Alignment:
Q  398 gtccccataagcttagctcatttggtaagggat 430  Q
    |||||||| ||||||||||||||||||||||||    
T  419705 gtccccatgagcttagctcatttggtaagggat 419737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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