View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13331_low_26 (Length: 233)
Name: NF13331_low_26
Description: NF13331
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13331_low_26 |
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Alignment Details
Target: chr7 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 36604709 - 36604928
Alignment:
| Q |
1 |
aatcttccatgccagaaaccataaaaatcctgtttttaaggcatgttcaccacaattttgcctcaatgtcaaacatacggtcatatgaatcaaaattgat |
100 |
Q |
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| T |
36604709 |
aatcttccatgccagaaaccataaaaatcctgtttttaagacatgttcaccacaattttgcctcaatgtcaaacattcggtcatatgaatcaaaattgat |
36604808 |
T |
|
| Q |
101 |
tattccaaagctcaatttaaccataagtaatc--nnnnnnnnnnnnttgtctcccactgaaaatttcacacatcaaaacataaatcacttaaattcaaac |
198 |
Q |
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||||||||||||| ||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36604809 |
tattccaaagctcgatttaactataagtaatcaaaaaaaaaaaaaattgtcttccactgaaaatttcacacatcaaaacataaatcacttaaattcaaac |
36604908 |
T |
|
| Q |
199 |
tcaatctaaaggaataaatt |
218 |
Q |
| |
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||||||||||||||| |||| |
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| T |
36604909 |
tcaatctaaaggaatcaatt |
36604928 |
T |
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