View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13336_low_13 (Length: 251)
Name: NF13336_low_13
Description: NF13336
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13336_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 25070213 - 25070458
Alignment:
| Q |
1 |
cactactctcatggtgaaaaaacatgagatcaagttataatcaccannnnnnnn-ctttgaataagccaaaaatcatccatttatgattaatgaacatat |
99 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
25070213 |
cactactctcatggtgaaaaaacatga--tcaagttataatcaccatttttttttctttgaataagccaaaaatcatcaatttatgattaatgaacatat |
25070310 |
T |
|
| Q |
100 |
agtatcaaagacccaacaattggctcaattaaatcacaacacaaaatcaactttcattacccacatgctgaaaaaccatgataaagttttgtccacccct |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
25070311 |
agtatcaaagacccaacaattggctcaattaaatcacaacacaaaatcaactttcattacccacatgctgaaaaaccatgataaagttttgcccacccct |
25070410 |
T |
|
| Q |
200 |
ctactattgaacatgtatgattgaagactgccatattttcttcgacat |
247 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
25070411 |
ctactattgaacatgtatgattgaagactgccatattttctttgacat |
25070458 |
T |
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