View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13338_high_34 (Length: 205)
Name: NF13338_high_34
Description: NF13338
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13338_high_34 |
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Alignment Details
Target: chr3 (Bit Score: 171; Significance: 5e-92; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 171; E-Value: 5e-92
Query Start/End: Original strand, 19 - 189
Target Start/End: Original strand, 52584329 - 52584499
Alignment:
| Q |
19 |
cataagaccttgatttaaggaacggtttctgtattcatcaacaagcatgtgagagcctaaagaaagggataggccttgttgtgtctggtgattattctcg |
118 |
Q |
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| T |
52584329 |
cataagaccttgatttaaggaacggtttctgtattcatcaacaagcatgtgagagcctaaagaaagggataggccttgttgtgtctggtgattattctcg |
52584428 |
T |
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| Q |
119 |
tttgctgcaccaagtagatccatcaaatgtcttgtgtgactcatctcagaaccttgtgctagcccaatatt |
189 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52584429 |
tttgctgcaccaagtagatccatcaaatgtcttgtgtgactcatctcagaaccttgtgctagcccaatatt |
52584499 |
T |
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