View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13339_high_4 (Length: 385)

Name: NF13339_high_4
Description: NF13339
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13339_high_4
NF13339_high_4
[»] chr3 (17 HSPs)
chr3 (11-376)||(4272081-4272446)
chr3 (253-356)||(25713426-25713529)
chr3 (251-358)||(24574904-24575011)
chr3 (250-347)||(33119622-33119719)
chr3 (251-327)||(6784086-6784162)
chr3 (266-345)||(24150832-24150911)
chr3 (266-347)||(19552148-19552229)
chr3 (266-347)||(26555817-26555898)
chr3 (266-347)||(35730935-35731016)
chr3 (266-347)||(36055007-36055088)
chr3 (266-347)||(38682429-38682510)
chr3 (267-323)||(34292505-34292561)
chr3 (275-359)||(45215410-45215494)
chr3 (263-347)||(50900444-50900528)
chr3 (306-347)||(43151162-43151203)
chr3 (307-339)||(28146300-28146332)
chr3 (263-327)||(30588862-30588926)
[»] chr7 (10 HSPs)
chr7 (251-357)||(31494232-31494338)
chr7 (251-347)||(47031248-47031344)
chr7 (257-352)||(24939640-24939735)
chr7 (251-326)||(36355468-36355543)
chr7 (250-334)||(32630714-32630798)
chr7 (250-346)||(48545802-48545899)
chr7 (272-339)||(32630649-32630716)
chr7 (266-347)||(151861-151942)
chr7 (266-347)||(27418642-27418723)
chr7 (266-346)||(30110807-30110887)
[»] chr2 (10 HSPs)
chr2 (251-347)||(27090638-27090734)
chr2 (250-356)||(2372963-2373069)
chr2 (250-359)||(30046113-30046222)
chr2 (250-359)||(30137157-30137266)
chr2 (250-356)||(24936122-24936228)
chr2 (250-356)||(25684806-25684912)
chr2 (275-339)||(2485652-2485716)
chr2 (273-356)||(18176476-18176559)
chr2 (266-354)||(29940941-29941029)
chr2 (251-347)||(38822919-38823016)
[»] chr5 (4 HSPs)
chr5 (250-354)||(7857021-7857125)
chr5 (267-324)||(9689337-9689394)
chr5 (307-347)||(6902692-6902732)
chr5 (266-347)||(40410593-40410674)
[»] chr1 (6 HSPs)
chr1 (251-356)||(9191125-9191230)
chr1 (273-347)||(51826843-51826917)
chr1 (266-347)||(26882826-26882907)
chr1 (275-356)||(27198265-27198346)
chr1 (266-347)||(45318463-45318544)
chr1 (266-354)||(52705389-52705477)
[»] chr8 (9 HSPs)
chr8 (254-334)||(14723940-14724020)
chr8 (253-354)||(24296639-24296740)
chr8 (266-355)||(2112786-2112875)
chr8 (266-347)||(42274975-42275056)
chr8 (253-339)||(38806866-38806952)
chr8 (266-347)||(1606013-1606094)
chr8 (266-347)||(29260276-29260357)
chr8 (266-346)||(43605364-43605444)
chr8 (250-322)||(23185725-23185797)
[»] chr6 (1 HSPs)
chr6 (250-356)||(35164798-35164904)
[»] chr4 (3 HSPs)
chr4 (251-334)||(5116977-5117060)
chr4 (266-347)||(8584005-8584086)
chr4 (275-347)||(28847111-28847183)
[»] scaffold0016 (1 HSPs)
scaffold0016 (266-347)||(81782-81863)


Alignment Details
Target: chr3 (Bit Score: 306; Significance: 1e-172; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 11 - 376
Target Start/End: Complemental strand, 4272446 - 4272081
Alignment:
Q  11 cctgtggagtgaaatcacaagaccagcaaaagaatctaagtaagccggggttgagatgcacaacccccatagcctacacccgtctcatatcatcaactgt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| | |||| ||||||||||||||| ||    
T  4272446 cctgtggagtgaaatcacaagaccagcaaaagaatctaagtaagtcggggttgagatgcacagcccccatagcccaaacccatctcatatcatcaaccgt 4272347  T
Q  111 gttaaaatggaactcgaaaaaacccttccctagaggcgtgacatcccagttctgaggatttggtcacaatttgcgaagattcgacttcagggccaaagta 210  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||||||||||||    
T  4272346 gttaaaatggaactcgaaaaaacccttccctagaggtgtgacatcccagttctgaagatttggccacaatttgcggagatttgacttcagggccaaagta 4272247  T
Q  211 gtccaaggggaatcacccttgtgaagagtaagaccgcataaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaa 310  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4272246 gtccaaggggaatcacccttgcgaagagtaagaccgcatgaattatttctaatctttaaaaatcttgattgaatacttcaagatttttctattaccaaaa 4272147  T
Q  311 aatcttttaaaatccttccaaatcccaatccaatacaacctcctaagtcttttgcttctgctgctt 376  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  4272146 aatcttttaaaatccttccaaatcccaatccaatacaacctcctaagtcttttgcttctactgctt 4272081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 253 - 356
Target Start/End: Original strand, 25713426 - 25713529
Alignment:
Q  253 ttatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctc 352  Q
    ||||||||||||||| || |||||||| |||||| ||||||||||||||| || ||||| |||||||||||||||| |||||||||| ||||||| ||||    
T  25713426 ttatttctaatcttttaaaatcttgatggaatacctcaagatttttctataactaaaaactcttttaaaatccttcgaaatcccaattcaatacaccctc 25713525  T
Q  353 ctaa 356  Q
    ||||    
T  25713526 ctaa 25713529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 251 - 358
Target Start/End: Original strand, 24574904 - 24575011
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacc 350  Q
    ||||||||||||||||| || ||||||||||||||  ||||||||||| ||| || ||||| ||||||||||| |||| |||||||||| |||| || ||    
T  24574904 aattatttctaatcttttaaaatcttgattgaatatctcaagatttttttataactaaaaagtcttttaaaattcttcaaaatcccaattcaattcatcc 24575003  T
Q  351 tcctaagt 358  Q
     |||||||    
T  24575004 ccctaagt 24575011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 250 - 347
Target Start/End: Original strand, 33119622 - 33119719
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    |||||||||||||||||| || ||||||||||||||| || | |||||| ||| || |||| ||||||||||||||||| | |||||||| |||||||    
T  33119622 aaattatttctaatcttttaaaatcttgattgaatacctcgaaatttttttataactaaaatatcttttaaaatccttcaatatcccaattcaataca 33119719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 327
Target Start/End: Original strand, 6784086 - 6784162
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatcctt 327  Q
    ||||||||||||||||| || ||||||||||||||  ||||||||||| ||| || ||||| |||| ||||||||||    
T  6784086 aattatttctaatcttttaaaatcttgattgaatatctcaagatttttgtataactaaaaagtcttataaaatcctt 6784162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 345
Target Start/End: Original strand, 24150832 - 24150911
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaata 345  Q
    ||||| |||||||||||||||  |||||||||| ||  || |||||||||||||||||||||  ||||| ||||||||||    
T  24150832 ttaaaaatcttgattgaataccacaagatttttataaaacaaaaaaatcttttaaaatcctttgaaatctcaatccaata 24150911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 19552148 - 19552229
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  |  |||||||||||||||||||||  ||||| ||||||||||||    
T  19552148 ttaaaaatcttgattgaataccacaagacttttataaaataaaaaaatcttttaaaatcctttaaaatctcaatccaataca 19552229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 26555898 - 26555817
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  26555898 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaataca 26555817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 35731016 - 35730935
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| ||||||||||||||   ||||| |||| ||  || |||||||||||||||||||||  ||||| ||||||||||||    
T  35731016 ttaaaaatcttgattgaatatcacaagacttttataaaacaaaaaaatcttttaaaatcctttgaaatctcaatccaataca 35730935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 36055007 - 36055088
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  36055007 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaataca 36055088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 38682510 - 38682429
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  |||||||||| ||  || ||||| |||||||||||||||  ||||| |||| |||||||    
T  38682510 ttaaaaatcttgattgaataccacaagatttttttaaaacaaaaaagtcttttaaaatcctttgaaatctcaatacaataca 38682429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 323
Target Start/End: Original strand, 34292505 - 34292561
Alignment:
Q  267 taaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaat 323  Q
    |||| |||||||||||||||| |||||||||| ||||   |||||||||||||||||    
T  34292505 taaaaatcttgattgaatactacaagatttttttatttttaaaaaatcttttaaaat 34292561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 359
Target Start/End: Original strand, 45215410 - 45215494
Alignment:
Q  275 ttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctcctaagtc 359  Q
    ||||||||||||  |||||||||| |||||  ||||| ||||||||||||| | ||||||  |||  |||||| |||||||||||    
T  45215410 ttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatcttaatttaatacaccctcctaagtc 45215494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 347
Target Start/End: Original strand, 50900444 - 50900528
Alignment:
Q  263 tctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    |||||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  |||||  |||||||||||    
T  50900444 tctttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatcttaatccaataca 50900528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 347
Target Start/End: Complemental strand, 43151203 - 43151162
Alignment:
Q  306 caaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    |||||| |||||||||||||||| |||||||||| |||||||    
T  43151203 caaaaagtcttttaaaatccttcaaaatcccaattcaataca 43151162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 339
Target Start/End: Original strand, 28146300 - 28146332
Alignment:
Q  307 aaaaaatcttttaaaatccttccaaatcccaat 339  Q
    ||||| |||||||||||||||||||||||||||    
T  28146300 aaaaagtcttttaaaatccttccaaatcccaat 28146332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 30588926 - 30588862
Alignment:
Q  263 tctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatcctt 327  Q
    |||||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||    
T  30588926 tctttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctt 30588862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 3e-39; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 251 - 357
Target Start/End: Complemental strand, 31494338 - 31494232
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacc 350  Q
    ||||||||||||||||| || ||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||    
T  31494338 aattatttctaatcttttaaaatcttgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatccttccaaatcccaatccaatacaccc 31494239  T
Q  351 tcctaag 357  Q
    |||||||    
T  31494238 tcctaag 31494232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 47031344 - 47031248
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    |||||||| |||| ||| || ||||||||||||||  ||||||||||||||| |||||||| | |||||||||||||| |||||||||| |||||||    
T  47031344 aattatttataattttttaaaatcttgattgaatatctcaagatttttctataaccaaaaagttttttaaaatccttcaaaatcccaattcaataca 47031248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 24939640 - 24939735
Alignment:
Q  257 ttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctc 352  Q
    ||||||||||| || ||| ||||||||||| ||||||||||||||| |||||||| |||||||||||| ||| || ||||||| ||||||| ||||    
T  24939640 ttctaatcttttaaaatcatgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatctttcgaactcccaatgcaatacaccctc 24939735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 251 - 326
Target Start/End: Original strand, 36355468 - 36355543
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatcct 326  Q
    ||||||||||||||||| || ||||||||||||||| ||| ||||||| ||| ||||||||||| |||||||||||    
T  36355468 aattatttctaatcttttaaaatcttgattgaatacctcacgatttttttataaccaaaaaatcatttaaaatcct 36355543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 250 - 334
Target Start/End: Complemental strand, 32630798 - 32630714
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatc 334  Q
    |||||||||||||||||| || | ||||||||||||| ||||||||||| ||| | |||||| || ||||||||||||| |||||    
T  32630798 aaattatttctaatcttttaaaagcttgattgaatacctcaagatttttttataagcaaaaagtcatttaaaatccttcaaaatc 32630714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 250 - 346
Target Start/End: Original strand, 48545802 - 48545899
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaaga-tttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatac 346  Q
    ||||||||||||||| || || ||||||||||||||| |||||| ||||| ||  || |||||||||||||||||| ||| ||||| |||| ||||||    
T  48545802 aaattatttctaatcctttaaaatcttgattgaatacctcaagattttttttagaactaaaaaatcttttaaaatctttcaaaatctcaattcaatac 48545899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 272 - 339
Target Start/End: Complemental strand, 32630716 - 32630649
Alignment:
Q  272 atcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaat 339  Q
    ||||||||||||||| ||||||||||| ||| |||||||  || ||||||||||||| ||||| ||||    
T  32630716 atcttgattgaatacctcaagatttttttataaccaaaacgtcatttaaaatccttcaaaatctcaat 32630649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 151942 - 151861
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| ||||||||||||||   ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  151942 ttaaaaatcttgattgaatatcacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaataca 151861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 27418642 - 27418723
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||| ||||    
T  27418642 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccagtaca 27418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 346
Target Start/End: Complemental strand, 30110887 - 30110807
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatac 346  Q
    ||||| ||||| |||||||||| ||||| |||| ||  || ||||| ||||||||||| |||  ||||| |||||||||||    
T  30110887 ttaaaaatcttaattgaatactacaagacttttataaaacaaaaaagtcttttaaaattctttgaaatctcaatccaatac 30110807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 27090734 - 27090638
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  ||||||||||||||||||    
T  27090734 aattatttctaatcttttaaaatcttgattgaatacttcaagatttttctataaccaaaaaatcttttaaaatctttggaaatcccaatccaataca 27090638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 2373069 - 2372963
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||| || ||||| |||||||||||||||| |||||||||| ||||||| |    
T  2373069 aaattatttctaatcttttaaaatcttgattgaatacctcaagatttttctataacaaaaaagtcttttaaaatccttcgaaatcccaattcaatacacc 2372970  T
Q  350 ctcctaa 356  Q
     ||||||    
T  2372969 atcctaa 2372963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 359
Target Start/End: Complemental strand, 30046222 - 30046113
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||| ||| || ||| ||||||||||| ||||||||||| ||| |||||||| || ||||||||||||| ||||| ||||  ||||||||    
T  30046222 aaattatttctaatattttaaaatcatgattgaatacctcaagatttttttataaccaaaaagtcatttaaaatccttcaaaatctcaatttaatacaac 30046123  T
Q  350 ctcctaagtc 359  Q
    | ||||||||    
T  30046122 cccctaagtc 30046113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 359
Target Start/End: Complemental strand, 30137266 - 30137157
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||| ||| || ||| ||||||||||| ||||||||||| ||| |||||||| || ||||||||||||| ||||| ||||  ||||||||    
T  30137266 aaattatttctaatattttaaaatcatgattgaatacctcaagatttttttataaccaaaaagtcatttaaaatccttcaaaatctcaatttaatacaac 30137167  T
Q  350 ctcctaagtc 359  Q
    | ||||||||    
T  30137166 cccctaagtc 30137157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 24936122 - 24936228
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||||||| || ||| ||||||||||  ||||||||||| ||| |||||||| || ||||||||||||| ||||| ||||  ||||||||    
T  24936122 aaattatttctaatcttttaaaatcatgattgaataactcaagatttttttataaccaaaaagtcatttaaaatccttcaaaatctcaattgaatacaac 24936221  T
Q  350 ctcctaa 356  Q
    | |||||    
T  24936222 cccctaa 24936228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 356
Target Start/End: Original strand, 25684806 - 25684912
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||||||| || ||| ||||||||||  ||||||||||| ||| |||||||| || ||||||||||||| ||||| ||||  ||||||||    
T  25684806 aaattatttctaatcttttaaaatcatgattgaataactcaagatttttttataaccaaaaagtcatttaaaatccttcaaaatctcaattgaatacaac 25684905  T
Q  350 ctcctaa 356  Q
    | |||||    
T  25684906 cccctaa 25684912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 275 - 339
Target Start/End: Original strand, 2485652 - 2485716
Alignment:
Q  275 ttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaat 339  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||||| |||| ||||||||||    
T  2485652 ttgattgaatatctcaagatttttctataaccaaaaaatcttttaaaattcttcgaaatcccaat 2485716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 273 - 356
Target Start/End: Original strand, 18176476 - 18176559
Alignment:
Q  273 tcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctcctaa 356  Q
    ||||||||||||||  |||||||||| |||||  ||||||||||||||||||| | ||||||  ||| ||||||| ||||||||    
T  18176476 tcttgattgaataccacaagatttttttattattaaaaaatcttttaaaatcccttcaaatcttaattcaatacaccctcctaa 18176559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 29941029 - 29940941
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctcct 354  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| |||||||||||| ||||||    
T  29941029 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaatacaccctcct 29940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 347
Target Start/End: Original strand, 38822919 - 38823016
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattacca-aaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||||||||||||||| || ||||||||||||| | || |||||||| ||| || | |||| ||||||| |||||||| ||||  |||| |||||||    
T  38822919 aattatttctaatcttttaaaatcttgattgaatgcctcgagatttttttataactataaaagtcttttacaatccttcaaaatttcaattcaataca 38823016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 7e-31; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 250 - 354
Target Start/End: Complemental strand, 7857125 - 7857021
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||||||| || ||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||| ||||| ||||| |||||| |    
T  7857125 aaattatttctaatcttttaaaatcttgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatccttctaaatctcaatctaatacacc 7857026  T
Q  350 ctcct 354  Q
    |||||    
T  7857025 ctcct 7857021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 324
Target Start/End: Original strand, 9689337 - 9689394
Alignment:
Q  267 taaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatc 324  Q
    |||| ||||||||||||||| ||||||||||| ||| |  ||||||||||||||||||    
T  9689337 taaaaatcttgattgaatacctcaagatttttttataattaaaaaatcttttaaaatc 9689394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 6902692 - 6902732
Alignment:
Q  307 aaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  6902692 aaaaagtcttttaaaatccttccaaatctcaatccaataca 6902732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 40410674 - 40410593
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| ||||||||||||| |  ||||| ||||||||||||    
T  40410674 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatccattgaaatctcaatccaataca 40410593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 4e-29; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 251 - 356
Target Start/End: Complemental strand, 9191230 - 9191125
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacc 350  Q
    ||||||||||||||||| || ||||||||||||||  ||||||||||||||| |||||||| |||||||||||  ||||||||| |||||||||||| ||    
T  9191230 aattatttctaatcttttaaaatcttgattgaataactcaagatttttctataaccaaaaagtcttttaaaatttttccaaatctcaatccaatacaccc 9191131  T
Q  351 tcctaa 356  Q
    ||||||    
T  9191130 tcctaa 9191125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 347
Target Start/End: Original strand, 51826843 - 51826917
Alignment:
Q  273 tcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||||||||||||  |||||||||| |||||  ||||| ||||||||||||| | ||||||  ||| |||||||    
T  51826843 tcttgattgaataccacaagatttttttattattaaaaagtcttttaaaatcccttcaaatcttaattcaataca 51826917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 26882826 - 26882907
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| ||||||||||||||   ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  26882826 ttaaaaatcttgattgaataacacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaataca 26882907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 356
Target Start/End: Complemental strand, 27198346 - 27198265
Alignment:
Q  275 ttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctcctaa 356  Q
    ||||||||||||  ||||| |||| ||| | |||||| ||||||||||||| |  || || |||||||||||| ||||||||    
T  27198346 ttgattgaataccacaagacttttttataaacaaaaagtcttttaaaatcccttaaagtctcaatccaatacaccctcctaa 27198265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 45318544 - 45318463
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||   |||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  45318544 ttaaaaatcttgattgaataccagaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaataca 45318463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 266 - 354
Target Start/End: Complemental strand, 52705477 - 52705389
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctcct 354  Q
    ||||| |||||||||||||||  ||||| |||| ||  || |||||||||||||||||| ||  ||||| ||||  |||||| ||||||    
T  52705477 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaaatcttttaaaatcttttgaaatctcaattgaatacaccctcct 52705389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 61; Significance: 4e-26; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 254 - 334
Target Start/End: Original strand, 14723940 - 14724020
Alignment:
Q  254 tatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatc 334  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  14723940 tatttctaatcttttaaaatcttgattgaatacttcaagatttttctataacaaaaaagtcttttaaaatccttccaaatc 14724020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 24296639 - 24296740
Alignment:
Q  253 ttatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctc 352  Q
    |||||| |||||||| || ||| ||||||||||| ||||||||||||||| |||||||| |||||||||||| ||| |||||||||| ||||||| ||||    
T  24296639 ttatttataatcttttaaaatcatgattgaatacctcaagatttttctataaccaaaaagtcttttaaaatctttcgaaatcccaattcaatacaccctc 24296738  T
Q  353 ct 354  Q
    ||    
T  24296739 ct 24296740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 355
Target Start/End: Complemental strand, 2112875 - 2112786
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaacctccta 355  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| |||||||||||| |||||||    
T  2112875 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaatacaccctccta 2112786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 266 - 347
Target Start/End: Complemental strand, 42275056 - 42274975
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || |||||||||||||||||||||  ||||| ||||||||||||    
T  42275056 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaaatcttttaaaatcctttgaaatctcaatccaataca 42274975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 339
Target Start/End: Original strand, 38806866 - 38806952
Alignment:
Q  253 ttatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaat 339  Q
    ||||||||||||| | || ||||||||||||||| ||||||||||| ||| ||  |||| |||| |||||||  || ||||||||||    
T  38806866 ttatttctaatctgttaaaatcttgattgaatacctcaagatttttttataacttaaaagtcttctaaaatctatcaaaatcccaat 38806952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 1606013 - 1606094
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  1606013 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaataca 1606094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 29260276 - 29260357
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  29260276 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaataca 29260357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 266 - 346
Target Start/End: Original strand, 43605364 - 43605444
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatac 346  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| |||||||||||    
T  43605364 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttgaaatctcaatccaatac 43605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 250 - 322
Target Start/End: Complemental strand, 23185797 - 23185725
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaa 322  Q
    |||||||||||||| | | || ||||||||||||||| || |||||||| ||| |  ||||| ||||||||||    
T  23185797 aaattatttctaatatattaaaatcttgattgaatacctcgagatttttttataagtaaaaagtcttttaaaa 23185725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 250 - 356
Target Start/End: Complemental strand, 35164904 - 35164798
Alignment:
Q  250 aaattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaatacaac 349  Q
    |||||||||||||||||| || ||| ||||||||||  ||||||||||| ||| |||||||| || ||||||||||||| ||||| ||||  ||||||||    
T  35164904 aaattatttctaatcttttaaaatcatgattgaataactcaagatttttttataaccaaaaagtcatttaaaatccttcaaaatctcaattgaatacaac 35164805  T
Q  350 ctcctaa 356  Q
    | |||||    
T  35164804 cccctaa 35164798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 5117060 - 5116977
Alignment:
Q  251 aattatttctaatctttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatc 334  Q
    ||||||||||||||| | || ||||||||||||||| | ||||||||| ||| |  ||||  |||||||||||| |||||||||    
T  5117060 aattatttctaatctcttaaaatcttgattgaataccttaagatttttttataattaaaaggtcttttaaaatctttccaaatc 5116977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 8584005 - 8584086
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  |  ||||| |||||||||||||||  ||||| ||||||||||||    
T  8584005 ttaaaaatcttgattgaataccacaagacttttataaaataaaaaagtcttttaaaatcctttgaaatctcaatccaataca 8584086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 275 - 347
Target Start/End: Original strand, 28847111 - 28847183
Alignment:
Q  275 ttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||||||||||  | ||| |||| |||||  ||||| |||||||||||||||  ||||| ||||||||||||    
T  28847111 ttgattgaataccactagacttttttattataaaaaagtcttttaaaatcctttaaaatctcaatccaataca 28847183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 266 - 347
Target Start/End: Original strand, 81782 - 81863
Alignment:
Q  266 ttaaagatcttgattgaatacttcaagatttttctattaccaaaaaatcttttaaaatccttccaaatcccaatccaataca 347  Q
    ||||| |||||||||||||||  ||||| |||| ||  || ||||| |||||||||||||||  ||||| ||||||||||||    
T  81782 ttaaaaatcttgattgaataccacaagacttttataaaacaaaaaagtcttttaaaatcctttaaaatctcaatccaataca 81863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University