View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1333_high_17 (Length: 256)
Name: NF1333_high_17
Description: NF1333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1333_high_17 |
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Alignment Details
Target: chr6 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 36 - 228
Target Start/End: Complemental strand, 10990925 - 10990733
Alignment:
| Q |
36 |
ggtgattctaaaccaagaatgttggaatgaatactgctactatcaagataagaaaatcctcaagtcaccaagaatgagcaaagaataatagcagaatttt |
135 |
Q |
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| T |
10990925 |
ggtgattctaaaccaagaatgctggaatgaatactgctactatcaagataagaaaatcctcaagtcaccaagaatgagcaaagaataatagcaaaatttt |
10990826 |
T |
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| Q |
136 |
ctgatgaacatttgtttgttttcactaaaaggccatggtttgccaatatgactaattttaaagcaagtaatctaataccagagggttacatgt |
228 |
Q |
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| T |
10990825 |
ctgatgaacatttgtttgttttcactaaaaggccatggtttgccaatatgactaattttaaagcaagtaatctaataccagagggttacatgt |
10990733 |
T |
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