View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1333_low_32 (Length: 203)
Name: NF1333_low_32
Description: NF1333
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1333_low_32 |
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Alignment Details
Target: chr6 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 7 - 108
Target Start/End: Original strand, 34190403 - 34190504
Alignment:
| Q |
7 |
tcttcatcatcacctgaaaccaccagctctgctgatggtttccatctcgactccaatgcactccagcgtctcacaggcaaacctatccctctgcgtttgt |
106 |
Q |
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| T |
34190403 |
tcttcatcatcacctgaaaccactagctctgctgatggtttccatctcgactccaatgcactccagcgtctcacaggcaaacctatccctctgcgtttgt |
34190502 |
T |
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| Q |
107 |
ct |
108 |
Q |
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|| |
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| T |
34190503 |
ct |
34190504 |
T |
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