View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13342_low_4 (Length: 210)
Name: NF13342_low_4
Description: NF13342
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13342_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 9502734 - 9502556
Alignment:
| Q |
1 |
cccaacacatctcgacctcctccgccacaatcctatacaacctctctctacacgacaccgccacctgagcaccaccgtgaccatcataaacaccgaagaa |
100 |
Q |
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| T |
9502734 |
cccaaaacatctcaacctcctccgccacaatcctatacaacctctctctacacgacaccgccacctgagcaccaccgtgaccatcataaacaccgaagaa |
9502635 |
T |
|
| Q |
101 |
atcacacttctctccatccttcatcgtaaaacctatccccacactcaccgcatcctccatttccttcctacagcctatg |
179 |
Q |
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||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |
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| T |
9502634 |
atcacacttctctccatccttcatcgtaaaacctatctccatactcaccgcatcctccatttccttcctacagcctatg |
9502556 |
T |
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