View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13346_high_27 (Length: 223)
Name: NF13346_high_27
Description: NF13346
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13346_high_27 |
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Alignment Details
Target: chr7 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 44259180 - 44259385
Alignment:
| Q |
1 |
aacgacaaaaatggaacaattagtcacaaaagagatnnnnnnntgaagatggccaaaggtggtcttagatcactcataatagctgtttcatttcctctat |
100 |
Q |
| |
|
||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44259180 |
aacgacagaaatggtacaattagtcacaaaagagataaaaaaatgaagatggccaaaggtggtcttagatcactcataatagctgtttcatttcctctat |
44259279 |
T |
|
| Q |
101 |
caataacccttttatccatttacatgtcctcttctttcaccttctcaaaccacaacaaagaagtaataaccggttctaaaaagcctttttggtttccacc |
200 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
44259280 |
caataacccttttatccatttacatatcctcttctttcaccttctcaaaccacaacaaagaagtaataaccggttctaaaaagcctttttggtttccacc |
44259379 |
T |
|
| Q |
201 |
atcatg |
206 |
Q |
| |
|
|||||| |
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|
| T |
44259380 |
atcatg |
44259385 |
T |
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