View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13349_low_1 (Length: 569)
Name: NF13349_low_1
Description: NF13349
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13349_low_1 |
 | |
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| [»] chr2 (5 HSPs) |
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| [»] scaffold0096 (1 HSPs) |
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| [»] chr7 (2 HSPs) |
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| [»] chr5 (1 HSPs) |
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| [»] chr4 (1 HSPs) |
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| [»] scaffold0028 (1 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0500 (1 HSPs) |
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| [»] scaffold0021 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 261; Significance: 1e-145; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 192 - 569
Target Start/End: Complemental strand, 13945887 - 13945515
Alignment:
| Q |
192 |
tttggaggcaatggaaaattcatagattatttatgagttgatgttgaacatttatcagattaggtcggttttgcacttgatttccatggtcttggaggac |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13945887 |
tttggaggcaatggaaaattcatagattatttatgagttgatgttgaacatttatcagattaggtcggttttgcacttgatttccatggtcttggaggac |
13945788 |
T |
|
| Q |
292 |
ttcgaggagattctttgtttggagaatcttcaagagaattttcatcctttttgtttgagtgaatttgactctcttcttcatcttcttcaatgatcnnnnn |
391 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13945787 |
ttcgaggagattctttgtttggagaatcttgaagagaattttcatcctttttgtttgagtgaatttgactctcttcttcatcttcttcaatgatcttttt |
13945688 |
T |
|
| Q |
392 |
nngattttcaaattcttcac-attcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgt--- |
487 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| ||| |
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|
| T |
13945687 |
ttgattttcaaattcttcactattcattaaattttatacgtatactttcttctacaattcttgttctta-----------ctttaggcttttgttgtttt |
13945599 |
T |
|
| Q |
488 |
--tgtagagtatcctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |
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|
| T |
13945598 |
aatttagagtatcccagaaatatagctttgtctgatttttaatcaaacttgcctaaattttccttattgtttaaaatgtaacaa |
13945515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 192 - 569
Target Start/End: Complemental strand, 14087076 - 14086704
Alignment:
| Q |
192 |
tttggaggcaatggaaaattcatagattatttatgagttgatgttgaacatttatcagattaggtcggttttgcacttgatttccatggtcttggaggac |
291 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14087076 |
tttggaggcaatggaaaattcatagattatttatgagttgatgttgaacatttatcagattaggtcggttttgcacttgatttccatggtcttggaggac |
14086977 |
T |
|
| Q |
292 |
ttcgaggagattctttgtttggagaatcttcaagagaattttcatcctttttgtttgagtgaatttgactctcttcttcatcttcttcaatgatcnnnnn |
391 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14086976 |
ttcgaggagattctttgtttggagaatcttgaagagaattttcatcctttttgtttgagtgaatttgactctcttcttcatcttcttcaatgatcttttt |
14086877 |
T |
|
| Q |
392 |
nngattttcaaattcttcac-attcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgt--- |
487 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||| ||| |
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|
| T |
14086876 |
ttgattttcaaattcttcactattcattaaattttatacgtatactttcttctacaattcttgttctta-----------ctttaggcttttgttgtttt |
14086788 |
T |
|
| Q |
488 |
--tgtagagtatcctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||| |
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|
| T |
14086787 |
aatttagagtatcccagaaatatagctttgtctgatttttaatcaaacttgcctaaattttccttattgtttaaaatgtaacaa |
14086704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 13946129 - 13945954
Alignment:
| Q |
19 |
gttgaaacgctcgaaatattttgtgagcaacattccatattgaacaatattgtttttgtatttggagtttgaggcaatgatcatgtgttggaggattatg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13946129 |
gttgaaacgctcgaaatattttgtgagcaacattccatattgaacaatattgtttttgtatttggagtttgaggcaatgatcatgtgttggaggattatg |
13946030 |
T |
|
| Q |
119 |
tgggcagga--tttatttttgttttagtagcgacgtgatgcatgagaagtaaatcgttgtcagtaaccttttattt |
192 |
Q |
| |
|
|||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13946029 |
tgggcaagattttttttttttttttagtagcgacgtgatgcatgagaagtaaatcgttgtcagtaaccttttattt |
13945954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 153; E-Value: 8e-81
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 14087318 - 14087143
Alignment:
| Q |
19 |
gttgaaacgctcgaaatattttgtgagcaacattccatattgaacaatattgtttttgtatttggagtttgaggcaatgatcatgtgttggaggattatg |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14087318 |
gttgaaacgctcgaaatattttgtgagcaacattccatattgaacaatattgtttttgtatttggagtttgaggcaatgatcatgtgttggaggattatg |
14087219 |
T |
|
| Q |
119 |
tgggcagga--tttatttttgttttagtagcgacgtgatgcatgagaagtaaatcgttgtcagtaaccttttattt |
192 |
Q |
| |
|
|||||| || ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14087218 |
tgggcaagattttttttttttttttagtagcgacgtgatgcatgagaagtaaatcgttgtcagtaaccttttattt |
14087143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 532
Target Start/End: Complemental strand, 24992931 - 24992798
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
24992931 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
24992832 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaa |
532 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| |
|
|
| T |
24992831 |
caagaaatatagctttgtctgactttgaatcaaa |
24992798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 48; Significance: 4e-18; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 363 - 535
Target Start/End: Complemental strand, 17946345 - 17946173
Alignment:
| Q |
363 |
tcttcttcatcttcttcaatgatcnnnnnnngattttcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaat |
462 |
Q |
| |
|
||||| || ||||||||||||||| ||||||||| ||| ||| |||||| |||||| ||| ||||||||||||||| | |||||||||||| || |
|
|
| T |
17946345 |
tcttcatcttcttcttcaatgatcttgttttgattttcaagttcctcaaattcatcaaatttgatatgtatactttcttctagagctcttgttcttagat |
17946246 |
T |
|
| Q |
463 |
tgtataacctgtaggcttttgatgttgtagagtatcctagaaatatagctttgtctgatttttaatcaaactt |
535 |
Q |
| |
|
| || | || |||||||||||||| | || ||||| | ||||| ||||||||||||||| | |||||||| |
|
|
| T |
17946245 |
tataaattctataggcttttgatgtagatgaatatcccaaaaataatgctttgtctgattttgagtcaaactt |
17946173 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 432 - 535
Target Start/End: Original strand, 27747145 - 27747248
Alignment:
| Q |
432 |
atactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatcctagaaatatagctttgtctgatttttaatcaa |
531 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| | ||||| ||||||||||| | ||| ||||| | |||||| |||||||||||||| |||||| |
|
|
| T |
27747145 |
atactttcttcaagaactcttgttcttaaattgtaaattctgtatgcttttgatgtggaagaatatcccaaaaatattcctttgtctgattttgaatcaa |
27747244 |
T |
|
| Q |
532 |
actt |
535 |
Q |
| |
|
|||| |
|
|
| T |
27747245 |
actt |
27747248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 569
Target Start/End: Complemental strand, 8998724 - 8998554
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
8998724 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
8998625 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
8998624 |
caagaaatatagctttgtctgattttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
8998554 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 399 - 569
Target Start/End: Complemental strand, 9007894 - 9007724
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
9007894 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
9007795 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
9007794 |
caagaaatatagctttgtctgactttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
9007724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 108
Target Start/End: Original strand, 27743829 - 27743867
Alignment:
| Q |
70 |
gtttttgtatttggagtttgaggcaatgatcatgtgttg |
108 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
27743829 |
gtttttgtatttggaatttgaggcaatgatcatgtgttg |
27743867 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0096 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0096
Description:
Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 569
Target Start/End: Complemental strand, 52893 - 52723
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
52893 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctatatgcttttgaagtagcagagtaac |
52794 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
52793 |
caagaaatatagctttgtctgattttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
52723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 569
Target Start/End: Complemental strand, 610610 - 610440
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
610610 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
610511 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
610510 |
caagaaatatagctttgtctgattttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
610440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Original strand, 9541389 - 9541438
Alignment:
| Q |
486 |
gttgtagagtatcctagaaatatagctttgtctgatttttaatcaaactt |
535 |
Q |
| |
|
|||||||||||||||| ||| |||||||| |||||||| |||||||||| |
|
|
| T |
9541389 |
gttgtagagtatcctaaaaagatagctttatctgatttagaatcaaactt |
9541438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 569
Target Start/End: Original strand, 724606 - 724776
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
724606 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
724705 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
724706 |
cgagaaatatagctttgtctgattttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
724776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 399 - 569
Target Start/End: Complemental strand, 116026 - 115856
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
116026 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
115927 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||||||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
115926 |
caagaaatatagctttgtctgattttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
115856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0028 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0028
Description:
Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 399 - 532
Target Start/End: Complemental strand, 85658 - 85525
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || | |||||| | |
|
|
| T |
85658 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtagcagagtaac |
85559 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaa |
532 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| |
|
|
| T |
85558 |
caagaaatatagctttgtctgactttgaatcaaa |
85525 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 435 - 535
Target Start/End: Complemental strand, 18830 - 18730
Alignment:
| Q |
435 |
ctttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatcctagaaatatagctttgtctgatttttaatcaaact |
534 |
Q |
| |
|
|||||||| | ||||||||||||||||||||| | ||||| ||||||||||| | ||| ||||| | |||||| |||||||||||||| | ||||||| |
|
|
| T |
18830 |
ctttcttcaagaactcttgttcttaaattgtaaattctgtaagcttttgatgtggaagaatatcccaaaaatattcctttgtctgattttgagtcaaact |
18731 |
T |
|
| Q |
535 |
t |
535 |
Q |
| |
|
| |
|
|
| T |
18730 |
t |
18730 |
T |
|
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Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 399 - 532
Target Start/End: Complemental strand, 19688675 - 19688542
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || |||||| | |
|
|
| T |
19688675 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctagaacttttgttctcaagttatacaccctataagcttttgaagtaacagagtaac |
19688576 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaa |
532 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| |
|
|
| T |
19688575 |
caagaaatatagctttgtctgactttgaatcaaa |
19688542 |
T |
|
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Target: scaffold0500 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0500
Description:
Target: scaffold0500; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 399 - 569
Target Start/End: Complemental strand, 9821 - 9651
Alignment:
| Q |
399 |
tcaaattcttcacattcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatc |
498 |
Q |
| |
|
|||| ||| ||| |||||| ||||||||| | ||||||||||||| |||| ||||||| || || || | ||| || |||||||| || ||||| | |
|
|
| T |
9821 |
tcaagttcctcaaattcatcaaattttatgtgcatactttcttctataacttttgttctcaagttatacaccctataagcttttgaagtatctgagtaac |
9722 |
T |
|
| Q |
499 |
ctagaaatatagctttgtctgatttttaatcaaacttgcctgaattgtcgttattgtttaaaatgtaacaa |
569 |
Q |
| |
|
| |||||||||||||||||||| ||| ||||||| || ||| || || || ||||||||||| |||||| |
|
|
| T |
9721 |
caagaaatatagctttgtctgactttgaatcaaattttcctaggttatctttgttgtttaaaatataacaa |
9651 |
T |
|
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Target: scaffold0021 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0021
Description:
Target: scaffold0021; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 446 - 524
Target Start/End: Complemental strand, 167108 - 167030
Alignment:
| Q |
446 |
aactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatcctagaaatatagctttgtctgatttt |
524 |
Q |
| |
|
||||||||||||||||||||| | ||||| ||||||||||| | ||| ||||| | |||||| |||| ||||||||| |
|
|
| T |
167108 |
aactcttgttcttaaattgtagattctgtaagcttttgatgtggaagaatatcccaaaaatattcctttatctgatttt |
167030 |
T |
|
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Target: chr8 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 520
Target Start/End: Original strand, 45495351 - 45495457
Alignment:
| Q |
414 |
tcattaaattttatacgtatactttcttctacaactcttgttcttaaattgtataacctgtaggcttttgatgttgtagagtatcctagaaatatagctt |
513 |
Q |
| |
|
|||| |||||| ||| | ||||||||||||| | ||||||||||| |||||| | || || ||||||||||| | ||| ||||| | |||||| |||| |
|
|
| T |
45495351 |
tcatcaaatttgatatgcatactttcttctagagttcttgttcttagattgtagattctatatgcttttgatgtagaagaatatcccaaaaatattgctt |
45495450 |
T |
|
| Q |
514 |
tgtctga |
520 |
Q |
| |
|
||||||| |
|
|
| T |
45495451 |
tgtctga |
45495457 |
T |
|
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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 535
Target Start/End: Complemental strand, 22834930 - 22834881
Alignment:
| Q |
486 |
gttgtagagtatcctagaaatatagctttgtctgatttttaatcaaactt |
535 |
Q |
| |
|
|||||||||||||||| ||| |||||||| |||||||| | ||||||||| |
|
|
| T |
22834930 |
gttgtagagtatcctaaaaagatagctttatctgatttatgatcaaactt |
22834881 |
T |
|
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