View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1334_high_30 (Length: 251)
Name: NF1334_high_30
Description: NF1334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1334_high_30 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 45800863 - 45801104
Alignment:
| Q |
11 |
cacagatcgcaacagccacaatgtctcctatcacaatagccacatcaacctcgaccacaatcacaatttaaaatcatgcttcaaatcaaatcaccttgta |
110 |
Q |
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| T |
45800863 |
cacatatcgcaacagccacaatgtctcctatcacaatagccacatcaacctcgaccacaatcacaatttaaaatcatgcttcaaatcaaatcaccttgta |
45800962 |
T |
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| Q |
111 |
ctgagaaaa-aattcaatagaatttaattctttttaattcaataacagtcgacgctgctgcttctcgtcaaaacaagttcagtaatcaatcacagaaatg |
209 |
Q |
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| T |
45800963 |
ctgagaaaaaaattcaacagaatttaattctttttaattcaataacagtccacgctgatgattctcgtcaaaacaagttcagtaatcaatcacagaaatg |
45801062 |
T |
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| Q |
210 |
aactcatacaagcataaatcaatcaacaaatgaatcaatcgc |
251 |
Q |
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| T |
45801063 |
aactcatacaagcataaatcaatcaacaaatgaatcaatcgc |
45801104 |
T |
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