View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1334_high_36 (Length: 218)
Name: NF1334_high_36
Description: NF1334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1334_high_36 |
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Alignment Details
Target: chr8 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 36764282 - 36764073
Alignment:
| Q |
1 |
ttgctcagccgtaaggccaaccttgatgctcgtgatcgttggggtagtacggtaatttcacttaaacaattattgttctgactgtttctattattattct |
100 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36764282 |
ttgctcagccgtaaggccaatcttgatgctcgtgatcgttggggtagtacggtaatttcacttaaacaattattgttctaactgtttctattattattct |
36764183 |
T |
|
| Q |
101 |
tattctcatcatcatacttatacttattttgaattagtcaattagctcgtgagtctttatcatacatattaatatttaattcaaattatttgttcttatt |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
36764182 |
tattctcatcatcatacttatacttattttgaattagtcaattagctcgtgagtctttatcatacatattaatatttaattcaaattatttgttcttatt |
36764083 |
T |
|
| Q |
201 |
tacctatgat |
210 |
Q |
| |
|
|||||||||| |
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|
| T |
36764082 |
tacctatgat |
36764073 |
T |
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