View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1334_low_45 (Length: 251)

Name: NF1334_low_45
Description: NF1334
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1334_low_45
NF1334_low_45
[»] chr8 (14 HSPs)
chr8 (9-251)||(22898718-22898960)
chr8 (61-251)||(25807156-25807346)
chr8 (61-251)||(25342887-25343077)
chr8 (18-251)||(24872477-24872710)
chr8 (61-251)||(25717100-25717290)
chr8 (61-245)||(25324569-25324753)
chr8 (61-251)||(25393199-25393389)
chr8 (61-251)||(25697267-25697457)
chr8 (18-251)||(23260102-23260335)
chr8 (61-251)||(25653211-25653401)
chr8 (152-251)||(25606544-25606643)
chr8 (138-251)||(25454889-25455002)
chr8 (73-245)||(25477586-25477758)
chr8 (187-251)||(25571793-25571857)
[»] scaffold0070 (3 HSPs)
scaffold0070 (73-245)||(48523-48695)
scaffold0070 (18-251)||(14961-15194)
scaffold0070 (152-251)||(35138-35237)
[»] scaffold1415 (1 HSPs)
scaffold1415 (61-251)||(943-1133)
[»] chr4 (1 HSPs)
chr4 (132-251)||(10325751-10325870)
[»] scaffold0830 (1 HSPs)
scaffold0830 (18-251)||(2453-2683)


Alignment Details
Target: chr8 (Bit Score: 235; Significance: 1e-130; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 9 - 251
Target Start/End: Original strand, 22898718 - 22898960
Alignment:
Q  9 accaaaggcgattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatca 108  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22898718 accaaaggagattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatca 22898817  T
Q  109 ttgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataaca 208  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  22898818 ttgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctaacctacaatatctacacttgaataaca 22898917  T
Q  209 acaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22898918 acaattttgttggaaatattccaaatagcatattcaattcttc 22898960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 25807346 - 25807156
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | ||| |||||||| | | ||| |||||| ||||  | |||  ||||||||| |  ||||||||||    
T  25807346 aatagcttaagtggatctattccttccaaaatcttcaacttgtcatcactcacacatttggaggttgaaaataatagcctctcaggcacaattccatcaa 25807247  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| ||||||||| || |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  25807246 atacgggatatagccttcctagtctgcaatatctacacttgaatgataacaattttgttggaaatattccaaataacatattcaactcttc 25807156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 25343077 - 25342887
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | ||| |||||||| | |   | |||||| ||||  | |||  ||||||||| |  ||||||||||    
T  25343077 aatagcttaagtggatctattccttccaaaatcttcaacttgtcatcactcacttatttggaggttgaagagaatagcctctcaggcacaattccatcaa 25342978  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| |||||||||||| ||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||    
T  25342977 atacgggatatagccttcctagcctgcaacatctacacttgaataataacaattttgttggaaatattccaaataacatattcaactcttc 25342887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 24872477 - 24872710
Alignment:
Q  18 gattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaa 117  Q
    ||||||||||||||||||||||||    ||  |||| ||| | |||||||| | ||||||||| ||||||||  || | |||||||||||| ||| |       
T  24872477 gattggctatcttgataaacttgagcagctactattggcaaacaatagctttactggatctataccttccaaaatcttcaacatgtcatcactgataggc 24872576  T
Q  118 ttggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttg 217  Q
    ||| |  |||| |||||| ||||||| || || ||||||||||| || |||||||||||||||||| | || |||||||| ||| || | ||||||||||    
T  24872577 ttgtatcttgaacaaaatcacctctccgggataattccatcaaatacgggatataaccttcctagcttgcagtatctacaattggatcataacaattttg 24872676  T
Q  218 ttggaaatattccaaatagcatattcaattcttc 251  Q
    ||||||||||||||||||| |||||||| |||||    
T  24872677 ttggaaatattccaaatagtatattcaactcttc 24872710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 25717290 - 25717100
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | ||| |||||||| | |  || |||| | |||| || |||  ||||||||| |   |||||||||    
T  25717290 aatagcttaagtggatctattccttccaaaatcttcaacttgtcatcactcactcatttgggggttgatcagaatagcctctcaggcacacttccatcaa 25717191  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| |||||||| ||| ||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  25717190 atacgggatatagccttcctaacctgcaatatctatacttgaatcataacaattttgttggaaatattccaaataacatattcaactcttc 25717100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 245
Target Start/End: Complemental strand, 25324753 - 25324569
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | |||||||||||| | | | | ||| |   ||| |||||| ||||||| || || ||||| ||||    
T  25324753 aatagcttaagtggatctattccttccaaaatcttcaacatgtcatcacttacatatttgtatcctgaccaaaatcacctctctgggataattccttcaa 25324654  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaa 245  Q
    | || ||||||| |||||||| ||| |||||||||  ||||||| | |||||||||||||||||||||||||||| |||||||||    
T  25324653 atacgggatatagccttcctaacctgcaatatctattcttgaatgataacaattttgttggaaatattccaaataacatattcaa 25324569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 25393389 - 25393199
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| |||||||||||| |||||||  || | ||| |||||||| | |   | |||||| |||| |  |||  ||||||||| |  ||||||||||    
T  25393389 aatagcttaagtggatctatttcttccaaaatcttcaacttgtcatcactcactgatttggaggttgatctgaatagcctctcaggcacaattccatcaa 25393290  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| ||||||||| || ||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  25393289 atacgggatatagccttcctagtctgcaatatctatacttgaatgataacaattttgttggaaatattccaaataacatattcaactcttc 25393199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 25697457 - 25697267
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | ||| |||||||| | | | | |||||| |||| |  |||  ||||||| | |  ||||||||||    
T  25697457 aatagcttaagtggatctattccttccaaaatcttcaacttgtcatcactcacatatttggaggttgatcgtaatagcctctcaagcacaattccatcaa 25697358  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| |||||||| ||| ||||||||||||||| || | ||||||||||||||||||||||||||||  |||||||| |||||    
T  25697357 atacgggatatagccttcctaacctgcaatatctacacttgtatcaaaacaattttgttggaaatattccaaataatatattcaactcttc 25697267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 251
Target Start/End: Complemental strand, 23260335 - 23260102
Alignment:
Q  18 gattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaa 117  Q
    |||||| |||||||||||||||||| |||| || || | | | |||||||| |||||||| |||||||| || ||| | |||||||||||| ||| |       
T  23260335 gattggttatcttgataaacttgaatttctaatcttggaaaacaatagcttgagtggatccattccttctaaactcctcaacatgtcatcactgacattc 23260236  T
Q  118 ttggagt-ttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaatttt 216  Q
    ||| ||| |||  | ||||||||||||||| || ||||| || || |  ||||||||||||||||  || ||||| |||||||||||| | |||| ||||    
T  23260235 ttg-agtcttgccctaaattacctctcaggcatgattccgtcgaataatggatataaccttcctatgctgcaatacctacacttgaatcataacagtttt 23260137  T
Q  217 gttggaaatattccaaatagcatattcaattcttc 251  Q
    ||||| ||| |||||||||| |||||||| |||||    
T  23260136 gttggcaatgttccaaatagtatattcaactcttc 23260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 25653401 - 25653211
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | |||||||||||| | |   | || ||| |||| || |||  ||||||||| |  ||||||||||    
T  25653401 aatagcttaagtggatctattccttccaaaatcttcaacatgtcatcactcattgatttcgaggttgatcagaatagcctctcaggcacaattccatcaa 25653302  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| ||||||||  || |||||| ||| ||||||| | ||||||||||||||||||||||||||||  |||||||| |||||    
T  25653301 atacgggatatagccttcctaatctgcaatatttactcttgaatgataacaattttgttggaaatattccaaataatatattcaactcttc 25653211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 152 - 251
Target Start/End: Complemental strand, 25606643 - 25606544
Alignment:
Q  152 ttccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    |||||||||| || ||||||| |||||||||  | ||||||||| |||||||| | |||||||||||||||||||||||||||| ||||||||| |||||    
T  25606643 ttccatcaaatacgggatatagccttcctagtttgcaatatctatacttgaatgaaaacaattttgttggaaatattccaaataacatattcaactcttc 25606544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 251
Target Start/End: Complemental strand, 25455002 - 25454889
Alignment:
Q  138 cctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagc 237  Q
    ||||||||| |  ||||||||||| || ||||||| ||||||||| || |||||||||  ||||||| | |||||||||||||||||||||| ||||| |    
T  25455002 cctctcaggcacaattccatcaaatacgggatatagccttcctagtctgcaatatctattcttgaatgataacaattttgttggaaatattctaaataac 25454903  T
Q  238 atattcaattcttc 251  Q
    |||||||| |||||    
T  25454902 atattcaactcttc 25454889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 245
Target Start/End: Complemental strand, 25477758 - 25477586
Alignment:
Q  73 ggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatata 172  Q
    ||||| ||||||||||| ||| | ||||| |||||| ||| | | ||| |  |||| ||||||||||||||||| || ||||||||||||||||| ||||    
T  25477758 ggatcaattccttccaaactcctcaacatatcatcactgacatacttgcatcttgaacaaaattacctctcaggcataattccatcaaaaacaggttata 25477659  T
Q  173 accttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaa 245  Q
     ||||||||  |||||| | ||    ||| || | ||||||||||||||||||||||||||||  ||||||||    
T  25477658 gccttcctaagctacaacaactttcgttgtatcaaaacaattttgttggaaatattccaaatattatattcaa 25477586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 187 - 251
Target Start/End: Complemental strand, 25571857 - 25571793
Alignment:
Q  187 caatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    ||||||||||||||| || | ||||||||||||||||||||||||| ||| |||||||| |||||    
T  25571857 caatatctacacttggatcataacaattttgttggaaatattccaagtagtatattcaactcttc 25571793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 245
Target Start/End: Original strand, 48523 - 48695
Alignment:
Q  73 ggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatata 172  Q
    ||||| ||||| ||||| ||| | ||||| |||||| ||| | | |||||  |||  ||||||||||||||||| || ||||||||||||||||| ||||    
T  48523 ggatcaattccatccaaactcctcaacatatcatcactgacatacttggatcttgtacaaaattacctctcaggcataattccatcaaaaacaggttata 48622  T
Q  173 accttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaa 245  Q
     ||||||||  |||||||||||| ||||| |    ||||||||||||||||||||||||||||  ||||||||    
T  48623 gccttcctaagctacaatatctagacttggaaggaaacaattttgttggaaatattccaaatattatattcaa 48695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 14961 - 15194
Alignment:
Q  18 gattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaa 117  Q
    ||||||||||||||||||||||||  | ||  ||||  |  | |||||||| ||||||||||||||||||||  || | ||| |||||||  | |   |     
T  14961 gattggctatcttgataaacttgagctgctattattgtctaacaatagcttaagtggatctattccttccaaaatcttcaacttgtcatcgctcactaat 15060  T
Q  118 ttggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttg 217  Q
    |||||| |||| || |||   |||||||| |  ||||||||||| || ||||||| ||||||||| || |||||||||  |||| || | ||||||||||    
T  15061 ttggaggttgatcagaatagtctctcaggcacaattccatcaaatacgggatatagccttcctagtctgcaatatctattcttggatcataacaattttg 15160  T
Q  218 ttggaaatattccaaatagcatattcaattcttc 251  Q
    |||||||||||||||||| ||||||||| |||||    
T  15161 ttggaaatattccaaataacatattcaactcttc 15194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 152 - 251
Target Start/End: Original strand, 35138 - 35237
Alignment:
Q  152 ttccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    |||||||||| || ||||||| ||||||||  || |||||||||||||||  | | |||||||||||||||||||||||||||| |||||| || |||||    
T  35138 ttccatcaaatacgggatatagccttcctaatctgcaatatctacacttgtttcaaaacaattttgttggaaatattccaaataacatattaaactcttc 35237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1415 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold1415
Description:

Target: scaffold1415; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 251
Target Start/End: Complemental strand, 1133 - 943
Alignment:
Q  61 aatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaattggagtttgagcaaaattacctctcaggaattattccatcaa 160  Q
    |||||||| ||||||||||||||||||||  || | ||| |||||||| | |   | |||||| || | || |||  ||||||||| |   |||||||||    
T  1133 aatagcttaagtggatctattccttccaaaatcttcaacttgtcatcactcactgatttggaggttaatcagaatagcctctcaggcacacttccatcaa 1034  T
Q  161 aaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattccaaatagcatattcaattcttc 251  Q
    | || ||||||| |||||||| ||| ||  ||||||||||| || | |||||||||||||||||||||||||||| ||||||||| |||||    
T  1033 atacgggatatagccttcctaacctgcataatctacacttgtatcaaaacaattttgttggaaatattccaaataacatattcaactcttc 943  T

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Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 10325870 - 10325751
Alignment:
Q  132 aaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttgttggaaatattcca 231  Q
    |||| |||||||  |||| ||||||||||| |  ||||||| |||||||||||||||||||||||| ||| ||   |||||||||  |||||||||||||    
T  10325870 aaatcacctctctcgaataattccatcaaatatgggatatagccttcctagcctacaatatctacatttgtatggtaacaattttactggaaatattcca 10325771  T
Q  232 aatagcatattcaattcttc 251  Q
    ||||| |||||||| |||||    
T  10325770 aatagtatattcaactcttc 10325751  T

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Target: scaffold0830 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0830
Description:

Target: scaffold0830; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 251
Target Start/End: Original strand, 2453 - 2683
Alignment:
Q  18 gattggctatcttgataaacttgaaattcttatattagcagaaaatagcttcagtggatctattccttccaacctcatgaacatgtcatcattgaaacaa 117  Q
    ||||| ||||||||||||||||||  |||| |||||  | |  |||| ||| |||||| |||||| ||||||  || | ||||||||||| || | |||     
T  2453 gattgtctatcttgataaacttgagcttctaatattgtctgttaataacttaagtggaactattcattccaaaatcttcaacatgtcatcgttaacacat 2552  T
Q  118 ttggagtttgagcaaaattacctctcaggaattattccatcaaaaacaggatataaccttcctagcctacaatatctacacttgaataacaacaattttg 217  Q
    |||||| |||| | ||||   |||||||| |  || |||||||| || ||||    |||||||| ||| ||| | |||||||||||| | ||||| ||||    
T  2553 ttggagcttgaacgaaatagtctctcaggcacaatcccatcaaatacgggatt---ccttcctaacctgcaaaaactacacttgaatcataacaaatttg 2649  T
Q  218 ttggaaatattccaaatagcatattcaattcttc 251  Q
    ||||||||||||||||||| || ||||| |||||    
T  2650 ttggaaatattccaaatagtattttcaactcttc 2683  T

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