View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13351_high_5 (Length: 410)
Name: NF13351_high_5
Description: NF13351
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13351_high_5 |
 | |
|
| [»] scaffold0627 (2 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 355; Significance: 0; HSPs: 18)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 1 - 391
Target Start/End: Original strand, 9074363 - 9074753
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9074363 |
tccttcagataaacacacttggaacaacaatattgagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatcccacttgtgtgaatgg |
9074462 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9074463 |
tgcacttcattggataagatatgaaaatcagcaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
9074562 |
T |
|
| Q |
201 |
tttggaaaccataatagtggaattgtggataacagacatatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgttt |
300 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9074563 |
tttggaaaccataatagtggaattgttgataacagacatatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgttt |
9074662 |
T |
|
| Q |
301 |
cagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcgtcctgtcttat |
391 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
9074663 |
cagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcgggctgtcttat |
9074753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 378
Target Start/End: Original strand, 1599937 - 1600315
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || || || |||| |||||||||||||| |
|
|
| T |
1599937 |
tccttgagataaacacacttggaacaccatcctggagaaatgttgaagtggatcctcaaatttctttttggatgcttaagaatcccacttgtgtgaatgg |
1600036 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|||||||||||||||||||||||| || || ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| | |
|
|
| T |
1600037 |
tgcacttcattggataagatatgagggtgagcaaatgtcaatattggttttctgttttgaaagtgagaggttgcagtcatttccttctcctccacatgag |
1600136 |
T |
|
| Q |
201 |
tttggaaaccataatagtggaa-ttgtggataacagaca---tatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgat |
296 |
Q |
| |
|
|||||||| ||||||| ||||| |||||| |||||| || || |||||||||||||||||||||||||||||||||||||| || |||||||||||| |
|
|
| T |
1600137 |
tttggaaatcataataatggaacttgtgg-taacagccatgttagcatgggagaattaaagggatttctttacatttgtgact--acctttttatctgat |
1600233 |
T |
|
| Q |
297 |
gtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatcctt |
378 |
Q |
| |
|
||| || ||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
1600234 |
gttccaatgtgggttatgaaggaatatggcattgaagaatcatggactaaggtttacaagtacgatacttcattcaatcctt |
1600315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 2 - 380
Target Start/End: Complemental strand, 8535969 - 8535588
Alignment:
| Q |
2 |
ccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggt |
101 |
Q |
| |
|
|||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| |
|
|
| T |
8535969 |
ccttgagataaacacacttggaaccccatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatggt |
8535870 |
T |
|
| Q |
102 |
gcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtgt |
201 |
Q |
| |
|
||||| |||||| |||||| ||| ||| | |||||||||||||| ||||||| ||||||||||||| | || ||||||||||||||||||| || ||| |
|
|
| T |
8535869 |
gcactacattggctaagatttgatggtctgcaaaggtcaatattgattttctgctttgaaagtgagacgctgaagtcatttccttctcctccacagatgt |
8535770 |
T |
|
| Q |
202 |
ttggaaaccataatagtggaattgtggataacagacatat---catgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgt |
298 |
Q |
| |
|
||||||| ||||||| |||| || | ||| |||||||| |||||||||||||||||||||||||||||||||||| | ||| |||||||||||||| |
|
|
| T |
8535769 |
ttggaaatcataataatggatttcttagtaatagacatattagcatgggagaattaaagggatttctttacatttgtgattcgacctttttatctgatgt |
8535670 |
T |
|
| Q |
299 |
ttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcg |
380 |
Q |
| |
|
|||| |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |||||||||||| |
|
|
| T |
8535669 |
ttcaatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacattgatacttcattcaatccttcg |
8535588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 1 - 378
Target Start/End: Complemental strand, 8529406 - 8529032
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |
|
|
| T |
8529406 |
tccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatgg |
8529307 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| |||||||||||||| ||||||| ||||||| ||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
8529306 |
tgcacttcattggataagatttgagggtcagcaaaggtcaatattggttttctgctttgaaaatgagaggttgcagtcgtttccttctcctccacatgtg |
8529207 |
T |
|
| Q |
201 |
tttggaaaccataatagtggaattgtggataacagacatatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgttt |
300 |
Q |
| |
|
|||||||| |||||| | |||| | || || |||||||||||||||||||||||| ||||||||||| ||| ||| ||||| |||||| |
|
|
| T |
8529206 |
tttggaaatcataatgtt--ttttgttg-taggcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgttt |
8529110 |
T |
|
| Q |
301 |
cagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatcctt |
378 |
Q |
| |
|
|| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
8529109 |
caatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatacttcgttcaatcctt |
8529032 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 8641849 - 8641475
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| |||||| ||||||| |||||||||||| | |
|
|
| T |
8641849 |
tccttgagataaacacacttggagcaccatcatggagaaatgttgaagtggatcctcagatttctatttcgagtcttaagtatcccacttgtgtgaatag |
8641750 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|| |||||||| || | || ||| | || ||||||||||||| | ||||||||| ||||||||||| ||| ||| ||||||||||||||| |||||| |
|
|
| T |
8641749 |
tgttcttcattgaatcaaatttgagggggagcaaaggtcaatattatgtttctgtttggaaagtgagagattgaagttatttccttctcctccacatgtg |
8641650 |
T |
|
| Q |
201 |
tttggaaacc---ataatagtggaattgtggataacagacatat---catgggagaattaaagggatttctttacattt------gtgactggacatttt |
288 |
Q |
| |
|
|||||||| | |||||| ||||||| | |||||| | ||| ||||||||| ||||||||||||| |||||||| |||||| ||| |||| |
|
|
| T |
8641649 |
tttggaaatcataataataatggaattcatggtaacaggcttattagcatgggagagttaaagggatttccttacatttgtgatcgtgactcgacctttt |
8641550 |
T |
|
| Q |
289 |
tatctgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgata |
363 |
Q |
| |
|
| | |||||| ||||||||||||||||||||||||| |||| ||||||||||||||| | |||||||||||||| |
|
|
| T |
8641549 |
tctttgatgtcacagtgtgggttatgaatgaatatggcattggagaatcatggactaaggcttacaacattgata |
8641475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 6 - 368
Target Start/End: Original strand, 2874139 - 2874507
Alignment:
| Q |
6 |
gagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgcac |
105 |
Q |
| |
|
|||||| |||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||| || ||||||||||| |||| |
|
|
| T |
2874139 |
gagatacacacgctcggaacaccatcatggagaaatgttgaagtggatcctcaaatttcttttttgaagcttttgaatccaacatgtgtgaatggcgcac |
2874238 |
T |
|
| Q |
106 |
ttcattggataagatatgaa---agtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtgtt |
202 |
Q |
| |
|
|||||||||| | || |||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2874239 |
ttcattggattatatttgaagcttggcaacaaaagtcaatattgtgtttcaattttgaaagtgagaggttgcagtcgtttccttctcctccacatgtgtt |
2874338 |
T |
|
| Q |
203 |
tggaaaccataatagtggaattgtggataacagacatatca---tgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtt |
299 |
Q |
| |
|
|||||| ||| ||| |||| || ||| || | ||| | |||||||||| ||||||||||||||||||||| | | | | | | ||||| |
|
|
| T |
2874339 |
tggaaatcatgataatggatttccccatagcatgcctattagattgggagaattgaagggatttctttacatttgtcatagatcgtctctcgagaatgtt |
2874438 |
T |
|
| Q |
300 |
tcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcg |
368 |
Q |
| |
|
|| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2874439 |
acaatgtgggttatgaatgaatatggcattggagaatcatggactattgtttacaacattgatacttcg |
2874507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 6 - 368
Target Start/End: Original strand, 2856529 - 2856897
Alignment:
| Q |
6 |
gagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgcac |
105 |
Q |
| |
|
|||||| |||| || |||||| || ||||||||||||||||||||||||||||||||||||||||| || | |||| || ||||||||||| |||| |
|
|
| T |
2856529 |
gagatacacacgctcggaacatcatcatggagaaatgttgaagtggatcctcaaatttcttttttgaagcttttgaatccaacatgtgtgaatggcgcac |
2856628 |
T |
|
| Q |
106 |
ttcattggataagatatgaaagt---cagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtgtt |
202 |
Q |
| |
|
|||||||||| | || |||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2856629 |
ttcattggattatatttgaagcttggcaacaaaagtcaatattgtgtttcaattttgaaagtgagaggttgcagtcgtttccttctcctccacatgtgtt |
2856728 |
T |
|
| Q |
203 |
tggaaaccataatagtggaattgtggataacagacatatca---tgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtt |
299 |
Q |
| |
|
|||||| ||| ||| |||| || ||| || | ||| | |||||||||| ||||||||||||||||||||| | | | | | | ||||| |
|
|
| T |
2856729 |
tggaaatcatgataatggatttccccatagcatgcctattagattgggagaattgaagggatttctttacatttgtcatagatcgtctctcgagaatgtt |
2856828 |
T |
|
| Q |
300 |
tcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcg |
368 |
Q |
| |
|
|| |||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||| |
|
|
| T |
2856829 |
acaatgtgggttatgaatgaatatggcattggagaatcatggactattgtttacaacattgatacttcg |
2856897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 6 - 368
Target Start/End: Original strand, 2844702 - 2845070
Alignment:
| Q |
6 |
gagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgcac |
105 |
Q |
| |
|
|||||| |||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| || ||||||||||| |||| |
|
|
| T |
2844702 |
gagatacacacgcttggaacaccatcatggagaaaggttgaagtggatcctcaaatttcttttttgaagcttttgaatccaacatgtgtgaatggcgcac |
2844801 |
T |
|
| Q |
106 |
ttcattggataagatatgaaa---gtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtgtt |
202 |
Q |
| |
|
|||||||||| | || ||||| | || ||| ||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
2844802 |
ttcattggattatatttgaaacggggcaacaaaagtcaatattgtgtttcaattttgaaagtgagaggttgcagtcgtttccttctcctccacatgtgtt |
2844901 |
T |
|
| Q |
203 |
tggaaaccataatagtggaattgtggataacagacatatca---tgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtt |
299 |
Q |
| |
|
|||||| ||| ||| |||| || || || | ||| | |||||||||| ||||||||||||||||||||| | | | | | ||||| |
|
|
| T |
2844902 |
tggaaatcatgataatggatttccccttagcatgcctattagattgggagaattgaagggatttctttacatttgtcatatatcgtctcttgagaatgtt |
2845001 |
T |
|
| Q |
300 |
tcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcg |
368 |
Q |
| |
|
|| |||||||||||||||||||||| |||| |||||||||||||| ||||||| ||||||||||||| |
|
|
| T |
2845002 |
acaatgtgggttatgaatgaatatggcattggagaatcatggactattgtttacagcattgatacttcg |
2845070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 366
Target Start/End: Complemental strand, 8644687 - 8644313
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttctttt---------ttgagtctcgagtatccgacttg |
91 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||||||||| || |||||||| | ||||| |||| |
|
|
| T |
8644687 |
tccttgagataaacacacttggaacaccatcatggagaaatgctgaagtagatcctcaaatttctattggatcaggtttgagtcttcattatcccactta |
8644588 |
T |
|
| Q |
92 |
tgtgaatggtgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcct |
191 |
Q |
| |
|
||| |||||||| ||||||||||| |||| ||| | | ||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
8644587 |
tgttaatggtgcgcttcattggatcagatttgaggatgaagaaaggtctatattgtgtttctgttttgaaagtgagaggttgcaatcatttccttctcct |
8644488 |
T |
|
| Q |
192 |
ccgcatgtgtttggaaaccataatagtggaatt-gtggataacagacatat---catgggagaattaaagggatttctttacatttgtgactggacattt |
287 |
Q |
| |
|
|| |||||| ||| || |||| |||| || || | |||| | ||| |||||||||||||| |||||| ||||||||||| || | | ||| |
|
|
| T |
8644487 |
cca---gtgtttcaaaatcaaaataatggatttcgtcg-taacgagcgtattcgcatgggagaattaaggggattactttacatttgcga-tacatattc |
8644393 |
T |
|
| Q |
288 |
ttatc-tgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatactt |
366 |
Q |
| |
|
|| || ||||||| || ||||||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8644392 |
ttttcgtgatgttgcaatgtgggttatgaatgaatatgacattggagaatcatggactaaggtttacaacattgatactt |
8644313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 199
Target Start/End: Complemental strand, 9003930 - 9003734
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| | ||| ||| |||||| | |||||||||||||||||||| |
|
|
| T |
9003930 |
tccttgagata--cacactgggaacaccatcatggagaaatgttgaagtggatcctcaactgtctatttggagtcttaattatccgacttgtgtgaatgg |
9003833 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgt |
199 |
Q |
| |
|
|||||||||||||| |||| ||| || | ||| ||||||||||| |||| ||| |||| ||||||||| || || |||||||| ||||| ||||| |
|
|
| T |
9003832 |
cgcacttcattggatcagatttgattttctgcaaatgtcaatattgtgtttcaatttggaaaatgagaggttccaatcttttccttcccctccacatgt |
9003734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 3 - 206
Target Start/End: Original strand, 2904642 - 2904848
Alignment:
| Q |
3 |
cttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtg |
102 |
Q |
| |
|
||||||||| |||| || |||||| || |||||||||| |||||||||||||||||||||||||||||| || | |||| || ||||||||||| | |
|
|
| T |
2904642 |
cttgagatacacacgctcggaacaacatcatggagaaatcttgaagtggatcctcaaatttcttttttgaagcttttgaatcccacatgtgtgaatggcg |
2904741 |
T |
|
| Q |
103 |
cacttcattggataagatatgaaa---gtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgt |
199 |
Q |
| |
|
| | |||||||| | | |||| |||| ||| ||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||| ||| | |
|
|
| T |
2904742 |
gattacattggatcatagttgaagatggtcaacaaaagtcaatattgtgtttcagttttgaaagtgagaggatgcaatcatttccttctcctccacatat |
2904841 |
T |
|
| Q |
200 |
gtttgga |
206 |
Q |
| |
|
||||||| |
|
|
| T |
2904842 |
gtttgga |
2904848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 363
Target Start/End: Complemental strand, 8678290 - 8677918
Alignment:
| Q |
1 |
tccttgagataaacacacttggaa-caccaatatggagaaatgttgaagtggatcctcaaatttctttt---------ttgagtctcgagtatccgactt |
90 |
Q |
| |
|
||||||||||||||||| |||||| ||||| ||||||||||| |||||||||||||||||||||| || ||||| ||| ||||| |||| |
|
|
| T |
8678290 |
tccttgagataaacacaattggaaacaccatcatggagaaatgctgaagtggatcctcaaatttctattggatcagatttgaggctccgttatcccactt |
8678191 |
T |
|
| Q |
91 |
gtgtgaatggtgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcc |
190 |
Q |
| |
|
|| | |||||||| ||||||||||| ||| ||| |||| ||| ||| ||||||| ||||||||| |||| ||||| |||||| |||||||||||||| |
|
|
| T |
8678190 |
gtattaatggtgcgcttcattggatcggatttgagggtcaagaaatgtctatattgtgtttctgtttagaaactgagaagttgcaatcatttccttctcc |
8678091 |
T |
|
| Q |
191 |
tccgcatgtgtttggaaaccataatagtggaatt-gtggataacagacatat---catgggagaattaaagggatttctttacatttgtgactggacatt |
286 |
Q |
| |
|
||| || ||| ||| ||||||| |||| || || | ||||| | ||| ||||||| |||||| ||||| ||||||||||| || | | || |
|
|
| T |
8678090 |
tcca---gtatttcaaaatcataataatggatttcgttg-taacaagcgtattcacatgggaaaattaagaggattactttacatttgcga-tacatatc |
8677996 |
T |
|
| Q |
287 |
tttatc-tgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgata |
363 |
Q |
| |
|
|| | ||||||| || |||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
8677995 |
ctttccgtgatgttgcaatgtgggatatgaatgaatatggcattggagaatcatggactaaggtttacaacattgata |
8677918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 81 - 366
Target Start/End: Complemental strand, 8637253 - 8636968
Alignment:
| Q |
81 |
tatccgacttgtgtgaatggtgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcat |
180 |
Q |
| |
|
||||| ||||||||||||||| | |||||||||| |||| | | |||| ||||||| ||||||| ||||||||| |||| |||||||||||| |||| |
|
|
| T |
8637253 |
tatcccacttgtgtgaatggtacgattcattggatcagatttaagggtcaagaaaggtctatattgtgtttctgtttagaaaatgagaggttgcaatcat |
8637154 |
T |
|
| Q |
181 |
ttccttctcctccgcatgtgtttggaaaccataatagtggaattgtggataacagacatat---catgggagaattaaagggatttctttacatttgtga |
277 |
Q |
| |
|
||||||||||||| ||||| ||| || |||| |||| || ||||| ||| ||| |||||||||| |||||| ||||| |||||||| |
|
|
| T |
8637153 |
ttccttctcctcca---gtgttacaaaatcaaaataatggatttcgtcataacgagtgtattcgcattggagaattaaggggattactttatatttgtga |
8637057 |
T |
|
| Q |
278 |
ctggacatttttatctgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatactt |
366 |
Q |
| |
|
| ||||| ||||||| || |||||||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||||| |
|
|
| T |
8637056 |
tacatcttttttccgtgatgttgcaatgtgggttatgaatgaatatggcattggagaatcatggactaaggtttacaacatcgatactt |
8636968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 4 - 379
Target Start/End: Original strand, 8547750 - 8548121
Alignment:
| Q |
4 |
ttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgc |
103 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||||||||| ||||||||||||||||||||| || ||| |||||| |||||||||||| |||| |
|
|
| T |
8547750 |
ttgagatacacacactcggaacaccaacatggagaaat----aagtggatcctcaaatttcttcttcttatcttatgtatcccacttgtgtgaatcgtgc |
8547845 |
T |
|
| Q |
104 |
acttcattggataagatat---gaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|||||||||||| ||| | ||||| | | |||| ||||||| ||| ||||||||||| |||||||| || ||||||||||||||| | |||| |
|
|
| T |
8547846 |
acttcattggatccgatttaaggaaag---gggagggtctatattgtgtttttgttttgaaagagagaggtttcaatcatttccttctccttcatctgtg |
8547942 |
T |
|
| Q |
201 |
tttggaaaccataatagtggaatt-gtggat--aacagacatatca---tgggagaattaaagggatttctttacatttgtgactggacatttttatctg |
294 |
Q |
| |
|
|||| ||| ||||||| | | || |||| | |||| ||| | |||||||||||||||||| |||||||||||||||||||| | | | ||| |
|
|
| T |
8547943 |
tttgaaaatcataataccgaagttcgtggtgtgagaagacgtattagcttgggagaattaaagggatgtctttacatttgtgactggaactatctctctt |
8548042 |
T |
|
| Q |
295 |
atgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttc |
379 |
Q |
| |
|
||||| || ||||||||||||| |||||||| ||| ||||||||||| ||||| |||||||||||| | ||||||||| |
|
|
| T |
8548043 |
atgttacaatgtgggttatgaacgaatatgg------agagtcatggactaagatttaccacattgatactttgaccaatccttc |
8548121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 366
Target Start/End: Original strand, 2904941 - 2905003
Alignment:
| Q |
304 |
tgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatactt |
366 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
2904941 |
tgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacattgatactt |
2905003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 8637342 - 8637278
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttct |
65 |
Q |
| |
|
||||||||||| | ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |
|
|
| T |
8637342 |
tccttgagatatatacacttggaacaccatcatggagaaatgctgaagtggatccccaaatttct |
8637278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 72
Target Start/End: Complemental strand, 3380892 - 3380855
Alignment:
| Q |
35 |
gagaaatgttgaagtggatcctcaaatttcttttttga |
72 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
3380892 |
gagaaatcttgaagtggatcctcaaatttcttttttga |
3380855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 242 - 279
Target Start/End: Complemental strand, 9003685 - 9003648
Alignment:
| Q |
242 |
catgggagaattaaagggatttctttacatttgtgact |
279 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
9003685 |
catgggagaattaaggggatttctttacatttgtgact |
9003648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 380
Target Start/End: Original strand, 48361489 - 48361871
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||| |
|
|
| T |
48361489 |
tccttgagataaacacacttggaacaccatcctggaggaatgttgaagtggatcctcacatttctttttcgagtctcgagtatcccacttgtgtgaatgg |
48361588 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||| |
|
|
| T |
48361589 |
tgcacttcattggataagatttgagggtcagcaaaggtcaatattgtttttctgttttgaaagtgagagggtgcagtcatttccttctcctccacatgtg |
48361688 |
T |
|
| Q |
201 |
tttggaaaccataatagtggaattgtggataacagacatat---catgggagaattaaagggatttctttacatttgtgactggacatttttatctgatg |
297 |
Q |
| |
|
|||||||| ||||||| ||||||| | | |||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
48361689 |
tttggaaatcataataatggaattcttggtaacaggcatattagcatgggagaattaaagggatttctttacatttgtgactcgacctttgcatctgatg |
48361788 |
T |
|
| Q |
298 |
tttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcg |
380 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||| |||||||||||||| |
|
|
| T |
48361789 |
tttcaatgtgggttatgaatgaatatggtattgaagaatcatagactaaggtttacaacatcaatactgcgttcaatccttcg |
48361871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 9 - 374
Target Start/End: Complemental strand, 35780274 - 35779921
Alignment:
| Q |
9 |
ataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgcacttc |
108 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||| ||| || || ||||||| |||||||||||||||| |||| |
|
|
| T |
35780274 |
ataaacacacttggagcaccatcatggagaactgttgaagtggatcctcgtatttctatttcaagccttaagtatcccacttgtgtgaatggtgtgcttc |
35780175 |
T |
|
| Q |
109 |
attggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtgtttggaaa |
208 |
Q |
| |
|
| ||||| | || ||| | || ||| ||||||||| | ||| ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
35780174 |
actggatcaaatttgaggggcaacaaaagtcaatattatgtttttgttttgaaggtgagaggttgcagccatttccttctcctccacatgtgtttggaat |
35780075 |
T |
|
| Q |
209 |
ccataatagtggaattgtggataacagacatatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtttcagtgtgg |
308 |
Q |
| |
|
||| ||| | | | | || || |||||||||||||||||||||||||||||||||||||| || ||||| ||||||| || ||||| |
|
|
| T |
35780074 |
tcatgataatag----gcgtat--------tagcatgggagaattaaagggatttctttacatttgtgacttgaatttttttgttgatgttacaatgtgg |
35779987 |
T |
|
| Q |
309 |
gttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaat |
374 |
Q |
| |
|
||||||||||| |||| ||||||||||| |||||||| |||||||||||||| |||||| ||||| |
|
|
| T |
35779986 |
gttatgaatgagcatggcattgaagaatcgtggactaaggtttacaacattgagacttcggtcaat |
35779921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 378
Target Start/End: Complemental strand, 9443567 - 9443193
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |
|
|
| T |
9443567 |
tccttgagataaacacacttggaacaacatcctggagaaatgttgaagtggatcctcaaatttctttttcgagtctaaagtatcccacttgtgtgaatgg |
9443468 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
|||||||||||||||||||| ||| | || |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
9443467 |
tgcacttcattggataagatttgaggatgagcaaaggtcaatattggttttctgctttgaaagtgagaggttgcagtcatttccttctcctccacatgtg |
9443368 |
T |
|
| Q |
201 |
tttggaaaccataatagtggaattgtggataacagacatatcatgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgttt |
300 |
Q |
| |
|
|||||||| |||||| | ||||| | || || |||||||||||||||||||||||| ||||||||||| ||| ||| ||||| |||||| |
|
|
| T |
9443367 |
tttggaaatcataatgtt--tattgtag-taggcctattagcatgggagaattaaagggatttctatacatttgtgatccgacctttatatctaatgttt |
9443271 |
T |
|
| Q |
301 |
cagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatcctt |
378 |
Q |
| |
|
|| |||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||| |
|
|
| T |
9443270 |
caatgtgggttatgaatgaatatggcattggagaatcatggactaagatttacaacatcgatacttcgttcaatcctt |
9443193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 63; Significance: 3e-27; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 5131236 - 5131022
Alignment:
| Q |
1 |
tccttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatgg |
100 |
Q |
| |
|
||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| |||||| ||| ||| || |||| ||| ||||||||||||| |
|
|
| T |
5131236 |
tccttgagatacacactcttggaacattgtcatggagaaatgttgaagtggatcttcagatttctatttcgaggcttgagtgtcctacttgtgtgaatga |
5131137 |
T |
|
| Q |
101 |
tgcacttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcctccgcatgtg |
200 |
Q |
| |
|
||||||||||||| | |||||| | |||||||| | |||| |||| |||||||||||||||| ||||| ||||| ||||||||||| || ||| |
|
|
| T |
5131136 |
cacacttcattggatcatatatgatcttagaaaaaggtcattgttgtgtttcagttttgaaagtgagagattgcaatcattcccttctcctccacacgtg |
5131037 |
T |
|
| Q |
201 |
tttggaaaccataat |
215 |
Q |
| |
|
|||| ||| |||||| |
|
|
| T |
5131036 |
tttgaaaatcataat |
5131022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 380
Target Start/End: Original strand, 26324195 - 26324289
Alignment:
| Q |
286 |
ttttatctgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatggactaaagtttacaacattgatacttcgttcaatccttcg |
380 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||| |||||||||| ||| ||||||||||||||||| |
|
|
| T |
26324195 |
ttttatctgatgtttcaatgtgggttatgaatgaatatggcactggagaatcatggactaagatttacaacatcgatgcttcgttcaatccttcg |
26324289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 242 - 273
Target Start/End: Complemental strand, 5130995 - 5130964
Alignment:
| Q |
242 |
catgggagaattaaagggatttctttacattt |
273 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
5130995 |
catgggagaattaaagggatttctttacattt |
5130964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 59; Significance: 7e-25; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 4 - 190
Target Start/End: Complemental strand, 16716833 - 16716647
Alignment:
| Q |
4 |
ttgagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgc |
103 |
Q |
| |
|
|||||||| ||||||| |||||||||| |||||||||| | | ||||||||||||||||| |||| |||| | |||| ||||||||||||||||| |
|
|
| T |
16716833 |
ttgagatacacacactcggaacaccaacatggagaaatatcaatgtggatcctcaaatttcattttcatgtcttatgaatcccacttgtgtgaatggtgc |
16716734 |
T |
|
| Q |
104 |
acttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcc |
190 |
Q |
| |
|
|||||||||| | | || ||| | | ||| ||| ||||||| ||| |||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
16716733 |
acttcattggttcacatttgagggaagggaaatgtctatattgtgtttttgttttgaaagtgagaagttgcattcatttccttctcc |
16716647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 242 - 366
Target Start/End: Complemental strand, 16716571 - 16716447
Alignment:
| Q |
242 |
catgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatgg |
341 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| ||||| | || || ||||| || |||||||||||||||||||||| |||| |||||||||| |
|
|
| T |
16716571 |
catgggagaattaaagggatttctatacatttctgactcaaacttcttcgaatatgttacaatgtgggttatgaatgaatatggcattggagaatcatgg |
16716472 |
T |
|
| Q |
342 |
actaaagtttacaacattgatactt |
366 |
Q |
| |
|
||||| |||||| |||||||||||| |
|
|
| T |
16716471 |
actaaggtttaccacattgatactt |
16716447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0627
Description:
Target: scaffold0627; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 378
Target Start/End: Complemental strand, 4872 - 4736
Alignment:
| Q |
242 |
catgggagaattaaagggatttctttacatttgtgactggacatttttatctgatgtttcagtgtgggttatgaatgaatatggtattgaagaatcatgg |
341 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| | | ||| ||||| || |||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
4872 |
catgggagaattaaagggatttctttacatttgtgactcaaactccttaaaatatgttacaatgtgggttatgaatgaatatggcattggtgaatcatgg |
4773 |
T |
|
| Q |
342 |
actaaagtttacaacattgatacttcgttcaatcctt |
378 |
Q |
| |
|
||||| |||||| ||||| |||||| || |||||||| |
|
|
| T |
4772 |
actaaggtttaccacattaatactttgtacaatcctt |
4736 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0627; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 6 - 190
Target Start/End: Complemental strand, 5130 - 4948
Alignment:
| Q |
6 |
gagataaacacacttggaacaccaatatggagaaatgttgaagtggatcctcaaatttcttttttgagtctcgagtatccgacttgtgtgaatggtgcac |
105 |
Q |
| |
|
|||||| ||||||| |||||| ||| |||||||||| | | ||||||||||||||||| |||| |||| | |||| ||||||||||||||||||| |
|
|
| T |
5130 |
gagatacacacactcggaacatcaacatggagaaatatcaatgtggatcctcaaatttcattttcatgtcttatgaatcccacttgtgtgaatggtgcac |
5031 |
T |
|
| Q |
106 |
ttcattggataagatatgaaagtcagtaaaggtcaatattgtttttctgttttgaaagtgagaggttgcagtcatttccttctcc |
190 |
Q |
| |
|
|||||||||| |||| ||| | || ||| ||| |||||| ||| |||||||| |||||||||||||| |||||||| ||||| |
|
|
| T |
5030 |
ttcattggatcagatttgagggaaaggaaacgtc--tattgtgtttttgttttgacagtgagaggttgcaatcatttccctctcc |
4948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University