View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13359_high_8 (Length: 368)
Name: NF13359_high_8
Description: NF13359
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13359_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 350
Target Start/End: Original strand, 29098209 - 29098558
Alignment:
| Q |
1 |
ataagcacaatttgatttctatattccatgttctttactctcttcatatcaaacatatatattgtaagggggttggatagtttaactggttgagctaaga |
100 |
Q |
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| T |
29098209 |
ataagcacaatttgatttctatattccatgttctttactctcttcatatcaaacatat----tgtaagggg-ttgggtagtttaactggttgagctaaga |
29098303 |
T |
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| Q |
101 |
attaaaggagtagaaggagttagttaacgatcggggttcaaatgctggcgaaggagaaaatactaacctaaccaatatact-aaaatttgtctcgaactc |
199 |
Q |
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| T |
29098304 |
attaaaggagtagaaggagttagttaacgatcggggttcaaacgctggcgaaggagaaaatactaacctaaccaatatactaaaaatttgtcttgaactc |
29098403 |
T |
|
| Q |
200 |
cctgatatttaacaaacaatgtcaatatcaatgctacta----nnnnnnnnnataaataagtcgacaaataacactagcaaagctgaattgctttgttgt |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||| |
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| T |
29098404 |
cctgatatttaacaaacaatgtcaatatcaatgctactatttttttttttttataaataactcgacaaataacactagcaaagctaaattgctttgctgt |
29098503 |
T |
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| Q |
296 |
tactatcttatgttaactcataatatctatcttctatttgtagaaactgaagaaa |
350 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29098504 |
tactatcttatgttaactcataatatctatcttctatttgtagaaactgaagaaa |
29098558 |
T |
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