View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1335_high_15 (Length: 327)

Name: NF1335_high_15
Description: NF1335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1335_high_15
NF1335_high_15
[»] chr6 (6 HSPs)
chr6 (13-300)||(7712209-7712496)
chr6 (161-224)||(10890389-10890452)
chr6 (161-224)||(29246399-29246462)
chr6 (162-237)||(32693471-32693546)
chr6 (82-147)||(12117149-12117214)
chr6 (161-234)||(1913813-1913886)
[»] chr3 (7 HSPs)
chr3 (161-247)||(21143744-21143830)
chr3 (161-227)||(49809185-49809251)
chr3 (161-265)||(46560678-46560783)
chr3 (80-159)||(354427-354506)
chr3 (81-158)||(2301837-2301914)
chr3 (123-159)||(3758630-3758666)
chr3 (69-161)||(34183232-34183324)
[»] chr7 (6 HSPs)
chr7 (78-159)||(3182430-3182511)
chr7 (97-159)||(26866926-26866988)
chr7 (108-155)||(3606808-3606855)
chr7 (183-237)||(39259375-39259429)
chr7 (161-209)||(12877467-12877515)
chr7 (161-237)||(21091301-21091377)
[»] chr2 (6 HSPs)
chr2 (77-161)||(37494706-37494789)
chr2 (162-237)||(21454614-21454688)
chr2 (161-236)||(30942500-30942575)
chr2 (81-148)||(42960706-42960773)
chr2 (163-276)||(29929916-29930029)
chr2 (77-158)||(42467900-42467980)
[»] chr1 (4 HSPs)
chr1 (165-218)||(19808813-19808866)
chr1 (104-158)||(4364243-4364297)
chr1 (164-237)||(30066727-30066800)
chr1 (161-193)||(19809051-19809083)
[»] chr4 (3 HSPs)
chr4 (125-161)||(17843915-17843951)
chr4 (81-161)||(41194731-41194811)
chr4 (161-237)||(42813504-42813581)
[»] scaffold0024 (2 HSPs)
scaffold0024 (163-234)||(121324-121395)
scaffold0024 (163-193)||(114598-114628)
[»] chr8 (3 HSPs)
chr8 (162-237)||(29858438-29858512)
chr8 (82-158)||(11791990-11792066)
chr8 (77-153)||(29858339-29858415)


Alignment Details
Target: chr6 (Bit Score: 280; Significance: 1e-157; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 280; E-Value: 1e-157
Query Start/End: Original strand, 13 - 300
Target Start/End: Complemental strand, 7712496 - 7712209
Alignment:
Q  13 aatatcaaaggtcttcaaaatggtgctccatgttccatcctgtggagccaatacgaaatcagacatgatattttgacacacgaatttgataacaaatttc 112  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7712496 aatatcaaaggtcttcaaaatggtgctccacgttccatcctgtggagccaatacgaaatcagacatgatattttgacacacgaatttgataacaaatttc 7712397  T
Q  113 gacaacagtttagatggttaacgtagttcaaatatgtggttaattacgtaatgaatataacaaggtgtcacaactcattaattatctactgaacatattt 212  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7712396 gacaacagtttagatggttaacatagttcaaatatgtggttaattacgtaatgaatataacaaggtgtcacaactcattaattatctactgaacatattt 7712297  T
Q  213 aaccacgattttaaacgtcattaactaggattgtcggtgttcaaatatacataatgtccattaatcacgatccatgttagaatgtaca 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7712296 aaccacgattttaaacgtcattaactaggattgtcggtgttcaaatatacataatgtccattaatcacgatccatgttagaatgtaca 7712209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 10890452 - 10890389
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgatttt 224  Q
    ||||||||||||||||||||||| |||||||||  ||| |||||||| | ||| ||||||||||    
T  10890452 taatgaatataacaaggtgtcacgactcattaaccatccactgaacacaattatccacgatttt 10890389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 224
Target Start/End: Complemental strand, 29246462 - 29246399
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgatttt 224  Q
    ||||||||||||||||||||| |||||||||||  ||  |||||||||| ||||||| ||||||    
T  29246462 taatgaatataacaaggtgtcgcaactcattaaccatacactgaacataattaaccaagatttt 29246399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 32693546 - 32693471
Alignment:
Q  162 aatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    ||||||||||| ||||| |||||||||||||| |  | || ||||||| |||| ||| ||||||||||||||||||    
T  32693546 aatgaatataataaggtttcacaactcattaactgcccacagaacataattaaacacaattttaaacgtcattaac 32693471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 147
Target Start/End: Complemental strand, 12117214 - 12117149
Alignment:
Q  82 attttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatat 147  Q
    |||||||||||| ||||||| | |||| ||| |||||| |||| |||||||| |||||||||||||    
T  12117214 attttgacacacaaatttgacatcaaacttcaacaacaatttatatggttaatgtagttcaaatat 12117149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 234
Target Start/End: Original strand, 1913813 - 1913886
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcatt 234  Q
    |||| ||||||| ||||| ||||||||||| || ||| ||||||||| | ||||||| |||||| ||| |||||    
T  1913813 taattaatataataaggtatcacaactcatgaaatatgtactgaacacaattaaccatgattttgaacttcatt 1913886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 8e-18; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 161 - 247
Target Start/End: Original strand, 21143744 - 21143830
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaactaggattgtc 247  Q
    ||||||||||||||| |||||||||||||||||| ||| ||||||| || |||||||| ||||| ||| |||||||| | |||||||    
T  21143744 taatgaatataacaaagtgtcacaactcattaatcatccactgaacgtaattaaccacaattttgaacttcattaaccatgattgtc 21143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 161 - 227
Target Start/End: Complemental strand, 49809251 - 49809185
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaa 227  Q
    ||||||||||||||| |||||||| || |||||||||||| |||||| | |||||||| ||||||||    
T  49809251 taatgaatataacaaagtgtcacatcttattaattatctattgaacaaaattaaccacaattttaaa 49809185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 265
Target Start/End: Complemental strand, 46560783 - 46560678
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaactagga-ttgtcggtgttcaaata 259  Q
    |||| ||||||||||||||||||||||||||||| ||  |||||| | | ||||||||||| || ||| ||||| ||||  | |||  ||||||||||||    
T  46560783 taatcaatataacaaggtgtcacaactcattaatcattcactgaaaacaattaaccacgatcttgaacttcattgactactacttgcaggtgttcaaata 46560684  T
Q  260 tacata 265  Q
    ||||||    
T  46560683 tacata 46560678  T

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Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 159
Target Start/End: Complemental strand, 354506 - 354427
Alignment:
Q  80 atattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaattac 159  Q
    ||||||||| |||| ||||||| ||||||||  |||||||  |||||||||||||| |   |||||||||| ||||||||    
T  354506 atattttgatacacaaatttgagaacaaattgtgacaacaacttagatggttaacgcatcacaaatatgtgattaattac 354427  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 2301837 - 2301914
Alignment:
Q  81 tattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaatta 158  Q
    ||||||||||||| | ||||||| |||| ||||||||   |||| || |||||   ||||||||||||||||||||||    
T  2301837 tattttgacacacaattttgatatcaaacttcgacaatgatttaaatagttaagaaagttcaaatatgtggttaatta 2301914  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 3758630 - 3758666
Alignment:
Q  123 tagatggttaacgtagttcaaatatgtggttaattac 159  Q
    |||||| |||||| |||||||||||||||||||||||    
T  3758630 tagatgattaacgcagttcaaatatgtggttaattac 3758666  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 69 - 161
Target Start/End: Original strand, 34183232 - 34183324
Alignment:
Q  69 aatcagacatgatattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaattacgt 161  Q
    ||||||| |||||||||||||| ||  |||||| ||||||   |||||||| ||| | ||||||| |   |||||||||| ||||||||||||    
T  34183232 aatcagaaatgatattttgacatactcatttgacaacaaaacccgacaacatttttggtggttaatgccattcaaatatggggttaattacgt 34183324  T

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Target: chr7 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 78 - 159
Target Start/End: Original strand, 3182430 - 3182511
Alignment:
Q  78 tgatattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaattac 159  Q
    |||| |||||| |||  ||||||| ||||||||||||||||  ||||||||||||| |||||| |||||||||| |||||||    
T  3182430 tgatgttttgatacaaaaatttgacaacaaatttcgacaactatttagatggttaaggtagttaaaatatgtggctaattac 3182511  T

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Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 26866988 - 26866926
Alignment:
Q  97 tttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaattac 159  Q
    ||||||| ||| |||||| | || ||| ||||||||||||||||||||||| |||||||||||    
T  26866988 tttgatatcaagtttcgaaaccaatttggatggttaacgtagttcaaatatttggttaattac 26866926  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 3606808 - 3606855
Alignment:
Q  108 atttcgacaacagtttagatggttaacgtagttcaaatatgtggttaa 155  Q
    |||| ||||||||||| |||||||| || |||||||||||||||||||    
T  3606808 attttgacaacagtttggatggttatcgcagttcaaatatgtggttaa 3606855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 39259429 - 39259375
Alignment:
Q  183 caactcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    ||||||||||| |||  ||| |||||| ||||||| |||||||||||||||||||    
T  39259429 caactcattaactatgcactcaacataattaaccatgattttaaacgtcattaac 39259375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 12877515 - 12877467
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacata 209  Q
    ||||||||||||||||||||  |||||||||||| |||||  |||||||    
T  12877515 taatgaatataacaaggtgttgcaactcattaatcatctatagaacata 12877467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 21091377 - 21091301
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    ||||||||||||||||||||  ||||| |||||||||  | |||||  | |||||||| ||||| || |||||||||    
T  21091377 taatgaatataacaaggtgttccaacttattaattattcattgaacgcaattaaccacaattttgaatgtcattaac 21091301  T

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Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 37494706 - 37494789
Alignment:
Q  77 atgatattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaattacgt 161  Q
    |||||||||||| |||  ||||||  |||||||||||| |||| ||| ||||||||| | |||||||||||||| ||||||||||    
T  37494706 atgatattttgatacaa-aatttggcaacaaatttcgataacaatttggatggttaatgcagttcaaatatgtgattaattacgt 37494789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 21454688 - 21454614
Alignment:
Q  162 aatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    ||||||||||||||| ||| ||||||||||||| ||||||| ||||  |||||| ||||| || ||||||||||||    
T  21454688 aatgaatataacaagttgttacaactcattaataatctactaaaca-gtttaactacgatgttcaacgtcattaac 21454614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 236
Target Start/End: Original strand, 30942500 - 30942575
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaa 236  Q
    ||||||||||||||||||| ||||| | || ||| ||| | ||||| || |||||||| |||||||||||||||||    
T  30942500 taatgaatataacaaggtgccacaattgataaatcatcgaatgaacgtaattaaccacaattttaaacgtcattaa 30942575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 42960773 - 42960706
Alignment:
Q  81 tattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatg 148  Q
    ||||||||||||| ||||||  |  ||||||||||||||  ||||||||||||| |||||||||||||    
T  42960773 tattttgacacacaaatttgtcattaaatttcgacaacaaattagatggttaacatagttcaaatatg 42960706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 29930029 - 29929916
Alignment:
Q  163 atgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaactaggattgtcggtgttcaaatatac 262  Q
    |||||||||||||||||||| || |||||||  ||| ||||||| || ||||||||||  || ||| |||||||| |  ||| || ||||||||| | |     
T  29930029 atgaatataacaaggtgtcaaaattcattaaccatccactgaacgtaattaaccacgacattgaacatcattaaccacaattttcagtgttcaaacacaa 29929930  T
Q  263 ataatgtccattaa 276  Q
    || |||||||||||    
T  29929929 atgatgtccattaa 29929916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 42467980 - 42467900
Alignment:
Q  77 atgatattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaatta 158  Q
    ||||||||||||||||  |||||||||   ||||| | ||||| || |||||||||| | ||||||||||||||||||||||    
T  42467980 atgatattttgacacagaaatttgatattgaatttgg-caacaattcagatggttaatgcagttcaaatatgtggttaatta 42467900  T

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Target: chr1 (Bit Score: 34; Significance: 0.0000000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 19808813 - 19808866
Alignment:
Q  165 gaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccac 218  Q
    ||||||||||||||||||||||||| |||| ||| | |||||||| ||||||||    
T  19808813 gaatataacaaggtgtcacaactcagtaatcatccattgaacataattaaccac 19808866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 158
Target Start/End: Original strand, 4364243 - 4364297
Alignment:
Q  104 acaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaatta 158  Q
    |||||||| ||||||| ||||||| ||||||| | ||||||||||| ||||||||    
T  4364243 acaaattttgacaacaatttagatagttaacgcaattcaaatatgtagttaatta 4364297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 30066800 - 30066727
Alignment:
Q  164 tgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    ||||||| |||||||||| ||||||| |||  ||||| ||||| || |||| || |||||| ||||||||||||    
T  30066800 tgaatatgacaaggtgtcgcaactcactaaccatctattgaacgtagttaagcatgattttcaacgtcattaac 30066727  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 161 - 193
Target Start/End: Complemental strand, 19809083 - 19809051
Alignment:
Q  161 taatgaatataacaaggtgtcacaactcattaa 193  Q
    |||||||||||||||||||| ||||||||||||    
T  19809083 taatgaatataacaaggtgttacaactcattaa 19809051  T

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Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 17843915 - 17843951
Alignment:
Q  125 gatggttaacgtagttcaaatatgtggttaattacgt 161  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17843915 gatggttaacgtagtttaaatatgtggttaattacgt 17843951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 161
Target Start/End: Original strand, 41194731 - 41194811
Alignment:
Q  81 tattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaattacgt 161  Q
    |||||||| | || ||||||| || ||||||||| |||| |||  ||||| |||| ||||||||||||||||| |||||||    
T  41194731 tattttgatatacaaatttgacaataaatttcgaaaacaatttgtatggtaaacgcagttcaaatatgtggttcattacgt 41194811  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 42813504 - 42813581
Alignment:
Q  161 taatgaatataacaaggtgtcacaa-ctcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    |||| ||||||||||||| |||||| |||||| || ||| ||| |||||| ||||||| |||||| || |||||||||    
T  42813504 taattaatataacaaggtatcacaacctcattgatcatccactaaacataattaaccatgattttcaatgtcattaac 42813581  T

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Target: scaffold0024 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 163 - 234
Target Start/End: Complemental strand, 121395 - 121324
Alignment:
Q  163 atgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcatt 234  Q
    |||||||||||||||||||||||||||||||  ||| ||| ||| ||  || |||| ||||||| |||||||    
T  121395 atgaatataacaaggtgtcacaactcattaaccatccactaaacgtaaatatccacaattttaagcgtcatt 121324  T

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Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 163 - 193
Target Start/End: Complemental strand, 114628 - 114598
Alignment:
Q  163 atgaatataacaaggtgtcacaactcattaa 193  Q
    |||||||||||||||||||||||||||||||    
T  114628 atgaatataacaaggtgtcacaactcattaa 114598  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 29858438 - 29858512
Alignment:
Q  162 aatgaatataacaaggtgtcacaactcattaattatctactgaacatatttaaccacgattttaaacgtcattaac 237  Q
    |||||||||||||||||| | |||||||||||  |||||||||||| | ||||||| |||||  ||| ||||||||    
T  29858438 aatgaatataacaaggtg-cgcaactcattaaccatctactgaacacaattaaccatgatttagaacatcattaac 29858512  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 11791990 - 11792066
Alignment:
Q  82 attttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggttaatta 158  Q
    ||||||||| | |||||||| | |||||||||||||||  ||||| |||||||  | |||| |||||||||| ||||    
T  11791990 attttgacataagaatttgacatcaaatttcgacaacaaattagacggttaacacaattcacatatgtggttgatta 11792066  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 29858339 - 29858415
Alignment:
Q  77 atgatattttgacacacgaatttgataacaaatttcgacaacagtttagatggttaacgtagttcaaatatgtggtt 153  Q
    ||||| |||||| |||  ||||||| | |||||||||||  || |||||| ||||||| || |||||||||||||||    
T  29858339 atgattttttgaaacaaaaatttgacatcaaatttcgacgtcaatttagaaggttaacataattcaaatatgtggtt 29858415  T

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