View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1335_low_12 (Length: 456)
Name: NF1335_low_12
Description: NF1335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1335_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 110 - 448
Target Start/End: Complemental strand, 7088638 - 7088300
Alignment:
| Q |
110 |
ttgtcaacattagttcaataaggttcatcgatctctcgcataattcattcacgggacaaatgcctgatagtttctttgagaattgtttctcccttcgtcg |
209 |
Q |
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| T |
7088638 |
ttgtcaacatgagttcaataaggttcattgatctctcgcataattcgttcgcgggacaaatgcctgatggtttcttcgagaattgtttctcccttcgtcg |
7088539 |
T |
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| Q |
210 |
cgtctctttatctatgaacttatttgaaggacaaattcctaccacactttcaaaatgttctttgttgaatagtgttgatctttcaaataatcattttagt |
309 |
Q |
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| T |
7088538 |
cgtctctttatctatgaacttatttgaaggacaaattcctaccacactttcaaaatgttctttgttgaatagtgttgatctttcaaataatcattttagt |
7088439 |
T |
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| Q |
310 |
ggtaatgttgatttttctagtgtttggtcattgaataggcttagaagcttggatctatcaaacaatgctttatctggaaacttggttaatggaatttcat |
409 |
Q |
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| T |
7088438 |
ggtaatgttgatttttctagggtttggtcattgaataggcttagaagcttggatctatcaaacaatgctttatctggaaacttggttaatggaatttcat |
7088339 |
T |
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| Q |
410 |
cattacataacttgaaagagttattgttagagaataatc |
448 |
Q |
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| T |
7088338 |
cattacataacttgaaagagttattgttagagaataatc |
7088300 |
T |
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