View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1335_low_21 (Length: 384)
Name: NF1335_low_21
Description: NF1335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1335_low_21 |
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Alignment Details
Target: chr6 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 137 - 373
Target Start/End: Original strand, 12999526 - 12999764
Alignment:
| Q |
137 |
catttgttaatatgatgtaaagaaaatgaagtagatgtacaattgaaaaattgaagaaataaagtcaagttattctagtgtttggccttcacttggtctt |
236 |
Q |
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| T |
12999526 |
catttgttaatatgatgtaaagaaaatgaagtagatgtacaattgaaaaattgaagaaataaagtcaagttattctagtgtttggccttgacttggtctt |
12999625 |
T |
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| Q |
237 |
gcaccgcataagatatagtcaaatttgactttcttttttgaaacctattca-ttacttacaacgccaatatatgaatttgagatttggtcaa-aattaaa |
334 |
Q |
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| T |
12999626 |
gcaccgcataagatatagtcaaatttgactttcttttttgaaacctattcatttacttacaacgccaatatatgaatttgagatttggtcaacgtttaaa |
12999725 |
T |
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| Q |
335 |
tttttagtagcattagcgactaaaataatactcattcat |
373 |
Q |
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| T |
12999726 |
tttttagtagcattagcgactaaaataatactccttcat |
12999764 |
T |
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