View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1335_low_24 (Length: 348)

Name: NF1335_low_24
Description: NF1335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1335_low_24
NF1335_low_24
[»] chr8 (37 HSPs)
chr8 (13-319)||(15720045-15720350)
chr8 (35-157)||(7693051-7693173)
chr8 (35-155)||(10839773-10839892)
chr8 (13-150)||(16448787-16448922)
chr8 (35-157)||(5031472-5031594)
chr8 (35-157)||(24618976-24619097)
chr8 (35-157)||(16008541-16008663)
chr8 (35-157)||(8793727-8793849)
chr8 (35-157)||(35149686-35149808)
chr8 (35-154)||(8453613-8453731)
chr8 (45-151)||(10184579-10184685)
chr8 (35-157)||(32597516-32597638)
chr8 (35-157)||(40483301-40483423)
chr8 (35-95)||(24821909-24821969)
chr8 (35-157)||(8803236-8803358)
chr8 (41-157)||(1223131-1223247)
chr8 (12-157)||(35011220-35011364)
chr8 (30-142)||(3236353-3236465)
chr8 (47-151)||(34711095-34711199)
chr8 (68-154)||(6354698-6354784)
chr8 (31-157)||(6899428-6899553)
chr8 (31-157)||(36366039-36366164)
chr8 (31-157)||(44796350-44796475)
chr8 (35-154)||(15726778-15726896)
chr8 (31-154)||(12958787-12958909)
chr8 (102-157)||(24915254-24915309)
chr8 (67-140)||(30924728-30924801)
chr8 (14-157)||(42786372-42786511)
chr8 (52-151)||(883653-883752)
chr8 (118-157)||(24177980-24178019)
chr8 (14-148)||(29690453-29690585)
chr8 (123-157)||(24822829-24822863)
chr8 (47-92)||(8840845-8840890)
chr8 (53-130)||(24478460-24478537)
chr8 (35-71)||(13013988-13014024)
chr8 (100-155)||(13831443-13831499)
chr8 (109-157)||(43332568-43332616)
[»] chr2 (55 HSPs)
chr2 (31-152)||(11030206-11030327)
chr2 (35-157)||(38554476-38554598)
chr2 (35-154)||(41153129-41153248)
chr2 (35-156)||(22333543-22333664)
chr2 (35-157)||(20555266-20555387)
chr2 (35-156)||(12962714-12962835)
chr2 (31-157)||(11182179-11182306)
chr2 (35-157)||(5109371-5109493)
chr2 (35-152)||(28248951-28249068)
chr2 (35-155)||(4410795-4410916)
chr2 (29-154)||(12873734-12873859)
chr2 (35-150)||(32457231-32457346)
chr2 (35-153)||(11794461-11794579)
chr2 (35-151)||(29169853-29169969)
chr2 (38-151)||(29988906-29989019)
chr2 (50-155)||(39445005-39445110)
chr2 (14-157)||(7943438-7943580)
chr2 (35-156)||(30758738-30758858)
chr2 (35-155)||(38983017-38983137)
chr2 (38-157)||(9152400-9152519)
chr2 (45-151)||(5281206-5281311)
chr2 (35-157)||(30761386-30761508)
chr2 (31-157)||(45571038-45571163)
chr2 (31-157)||(45574705-45574830)
chr2 (31-157)||(45578372-45578497)
chr2 (31-157)||(45582039-45582164)
chr2 (31-157)||(45585706-45585831)
chr2 (31-157)||(45589373-45589498)
chr2 (31-157)||(45593040-45593165)
chr2 (31-157)||(45596707-45596832)
chr2 (31-157)||(45600374-45600499)
chr2 (31-157)||(45604041-45604166)
chr2 (31-157)||(45607708-45607833)
chr2 (31-157)||(45611375-45611500)
chr2 (31-157)||(45615042-45615167)
chr2 (35-156)||(34447522-34447642)
chr2 (38-157)||(36881541-36881654)
chr2 (34-116)||(3837427-3837509)
chr2 (11-157)||(3838414-3838557)
chr2 (31-157)||(7833290-7833416)
chr2 (31-157)||(45034406-45034531)
chr2 (35-151)||(42698082-42698198)
chr2 (35-156)||(2936300-2936423)
chr2 (35-152)||(35728482-35728600)
chr2 (29-151)||(33824364-33824486)
chr2 (35-157)||(43713992-43714113)
chr2 (103-156)||(5559372-5559425)
chr2 (35-156)||(10204936-10205056)
chr2 (99-156)||(12486074-12486131)
chr2 (35-112)||(28494757-28494834)
chr2 (38-95)||(37670388-37670445)
chr2 (35-91)||(32487064-32487120)
chr2 (75-130)||(14803068-14803123)
chr2 (35-90)||(28014348-28014403)
chr2 (43-95)||(920484-920536)
[»] chr7 (39 HSPs)
chr7 (35-155)||(29365639-29365759)
chr7 (35-155)||(36245394-36245514)
chr7 (35-157)||(8566099-8566221)
chr7 (35-154)||(28677335-28677454)
chr7 (35-158)||(41850603-41850726)
chr7 (6-157)||(11668006-11668155)
chr7 (35-157)||(2523788-2523910)
chr7 (31-157)||(32811724-32811849)
chr7 (35-130)||(48838347-48838442)
chr7 (35-148)||(45533247-45533360)
chr7 (35-157)||(39153305-39153425)
chr7 (35-157)||(2610195-2610316)
chr7 (35-157)||(13807250-13807368)
chr7 (35-156)||(30869204-30869325)
chr7 (53-152)||(30823722-30823821)
chr7 (35-157)||(24163276-24163399)
chr7 (52-157)||(10007611-10007716)
chr7 (41-157)||(40142797-40142913)
chr7 (35-157)||(6838385-6838505)
chr7 (31-157)||(32811392-32811517)
chr7 (35-141)||(40176054-40176160)
chr7 (52-157)||(44682574-44682679)
chr7 (31-155)||(4826772-4826895)
chr7 (35-148)||(41395680-41395793)
chr7 (35-149)||(45441454-45441568)
chr7 (35-156)||(48082808-48082928)
chr7 (35-95)||(2680876-2680936)
chr7 (35-151)||(10462391-10462506)
chr7 (35-95)||(28298924-28298984)
chr7 (35-113)||(2399970-2400048)
chr7 (103-157)||(27231919-27231973)
chr7 (31-157)||(31227501-31227626)
chr7 (35-151)||(9979819-9979934)
chr7 (59-147)||(34117981-34118069)
chr7 (31-74)||(21124478-21124521)
chr7 (103-152)||(4925904-4925953)
chr7 (99-156)||(28020010-28020067)
chr7 (12-148)||(33901055-33901189)
chr7 (35-147)||(45123263-45123375)
[»] chr1 (34 HSPs)
chr1 (31-157)||(38590080-38590208)
chr1 (35-157)||(38040294-38040416)
chr1 (35-157)||(38737949-38738071)
chr1 (52-157)||(50155333-50155438)
chr1 (35-151)||(8971242-8971358)
chr1 (35-157)||(26070832-26070954)
chr1 (35-157)||(26760191-26760313)
chr1 (35-157)||(26924221-26924343)
chr1 (35-154)||(519851-519970)
chr1 (35-154)||(34146823-34146941)
chr1 (38-157)||(49944841-49944960)
chr1 (35-157)||(37515108-37515230)
chr1 (35-147)||(34332494-34332606)
chr1 (35-151)||(44939084-44939200)
chr1 (29-113)||(15286021-15286105)
chr1 (35-157)||(29256619-29256738)
chr1 (35-151)||(640536-640651)
chr1 (38-157)||(6793602-6793721)
chr1 (38-148)||(18744576-18744682)
chr1 (35-153)||(23923562-23923680)
chr1 (37-130)||(6661549-6661642)
chr1 (35-130)||(5891744-5891839)
chr1 (35-149)||(11386170-11386284)
chr1 (35-145)||(15342957-15343067)
chr1 (31-157)||(43929360-43929485)
chr1 (31-157)||(47678270-47678395)
chr1 (77-155)||(7375529-7375607)
chr1 (31-157)||(47844542-47844667)
chr1 (35-156)||(24305683-24305804)
chr1 (35-151)||(27819329-27819446)
chr1 (35-82)||(39748637-39748684)
chr1 (35-90)||(47912835-47912890)
chr1 (35-73)||(2351151-2351189)
chr1 (53-116)||(9387259-9387320)
[»] chr4 (44 HSPs)
chr4 (35-155)||(30191906-30192026)
chr4 (35-157)||(48361060-48361182)
chr4 (42-157)||(53225669-53225784)
chr4 (13-156)||(48195899-48196040)
chr4 (31-157)||(16412242-16412368)
chr4 (35-157)||(44111763-44111885)
chr4 (13-154)||(8347656-8347795)
chr4 (35-151)||(25477563-25477679)
chr4 (35-154)||(21554127-21554245)
chr4 (30-157)||(41116570-41116696)
chr4 (35-154)||(42670775-42670894)
chr4 (42-157)||(47943735-47943850)
chr4 (35-157)||(45828433-45828555)
chr4 (35-157)||(50121445-50121567)
chr4 (43-156)||(42169069-42169182)
chr4 (52-157)||(43117889-43117994)
chr4 (35-151)||(4386150-4386266)
chr4 (30-157)||(53658377-53658504)
chr4 (35-157)||(3162903-3163025)
chr4 (35-157)||(36132653-36132775)
chr4 (35-116)||(19150772-19150853)
chr4 (35-111)||(32714287-32714363)
chr4 (11-157)||(42804264-42804407)
chr4 (31-157)||(20459255-20459380)
chr4 (31-157)||(43020764-43020889)
chr4 (31-157)||(47866044-47866169)
chr4 (30-95)||(44061401-44061466)
chr4 (69-157)||(9894633-9894721)
chr4 (31-157)||(20745346-20745471)
chr4 (35-116)||(35429791-35429872)
chr4 (30-91)||(50685469-50685530)
chr4 (36-116)||(9044406-9044486)
chr4 (35-156)||(31977762-31977885)
chr4 (103-158)||(19150665-19150720)
chr4 (35-154)||(33010685-33010804)
chr4 (52-157)||(2643616-2643722)
chr4 (103-157)||(3043800-3043854)
chr4 (35-148)||(43141784-43141897)
chr4 (100-157)||(37895338-37895395)
chr4 (100-157)||(52136707-52136764)
chr4 (101-157)||(8826774-8826830)
chr4 (85-148)||(24100776-24100839)
chr4 (30-130)||(45096609-45096709)
chr4 (59-91)||(50685527-50685559)
[»] chr3 (34 HSPs)
chr3 (35-157)||(21662894-21663016)
chr3 (37-157)||(12747717-12747837)
chr3 (35-157)||(51516966-51517087)
chr3 (35-157)||(53441925-53442047)
chr3 (31-154)||(9236097-9236221)
chr3 (35-154)||(12064927-12065046)
chr3 (40-154)||(51723389-51723503)
chr3 (50-154)||(54537454-54537558)
chr3 (35-158)||(23222976-23223098)
chr3 (30-148)||(25910204-25910322)
chr3 (38-156)||(19649600-19649718)
chr3 (35-157)||(35099073-35099195)
chr3 (35-157)||(45010768-45010890)
chr3 (35-135)||(8266263-8266361)
chr3 (35-152)||(20028489-20028604)
chr3 (50-151)||(52864965-52865066)
chr3 (35-157)||(36985164-36985286)
chr3 (35-157)||(37010603-37010725)
chr3 (35-154)||(44518047-44518166)
chr3 (41-159)||(53357313-53357431)
chr3 (103-157)||(5177851-5177905)
chr3 (31-152)||(49885392-49885512)
chr3 (35-130)||(25954040-25954135)
chr3 (68-157)||(40460353-40460443)
chr3 (35-157)||(33808328-33808449)
chr3 (35-92)||(13622505-13622562)
chr3 (35-95)||(9197099-9197159)
chr3 (38-157)||(28406488-28406607)
chr3 (35-154)||(43448969-43449088)
chr3 (35-157)||(53441915-53442037)
chr3 (38-134)||(2544489-2544586)
chr3 (31-156)||(48593151-48593276)
chr3 (53-149)||(29290794-29290890)
chr3 (109-157)||(50354276-50354323)
[»] chr5 (26 HSPs)
chr5 (35-154)||(38394439-38394558)
chr5 (35-154)||(21488301-21488420)
chr5 (35-157)||(13789750-13789872)
chr5 (35-154)||(5002158-5002277)
chr5 (35-154)||(18473486-18473605)
chr5 (30-129)||(919655-919754)
chr5 (35-157)||(29299365-29299488)
chr5 (35-156)||(33478114-33478237)
chr5 (52-149)||(3814006-3814103)
chr5 (14-157)||(11931977-11932119)
chr5 (30-95)||(13664959-13665024)
chr5 (30-151)||(22101922-22102043)
chr5 (35-154)||(34297192-34297314)
chr5 (51-157)||(39239802-39239909)
chr5 (52-154)||(14913141-14913243)
chr5 (31-157)||(27488355-27488480)
chr5 (52-151)||(36434713-36434812)
chr5 (35-157)||(32902786-32902908)
chr5 (35-95)||(1248899-1248960)
chr5 (39-92)||(18391520-18391573)
chr5 (71-141)||(14723410-14723480)
chr5 (31-157)||(29031051-29031176)
chr5 (68-151)||(8235428-8235511)
chr5 (102-155)||(35349498-35349551)
chr5 (35-132)||(36286077-36286174)
chr5 (36-92)||(14221864-14221920)
[»] scaffold0001 (1 HSPs)
scaffold0001 (35-157)||(156786-156908)
[»] scaffold0110 (1 HSPs)
scaffold0110 (14-157)||(1532-1672)
[»] chr6 (21 HSPs)
chr6 (38-151)||(12999776-12999890)
chr6 (35-150)||(12450366-12450481)
chr6 (35-157)||(3064891-3065013)
chr6 (35-157)||(17265739-17265861)
chr6 (35-157)||(28630761-28630883)
chr6 (35-157)||(30627831-30627953)
chr6 (43-155)||(1158271-1158383)
chr6 (35-151)||(30895198-30895314)
chr6 (35-90)||(21162418-21162473)
chr6 (29-157)||(10283306-10283434)
chr6 (38-137)||(27909002-27909102)
chr6 (35-157)||(2972172-2972294)
chr6 (68-157)||(2230400-2230489)
chr6 (45-154)||(7257358-7257467)
chr6 (52-157)||(7649807-7649912)
chr6 (51-148)||(16120995-16121092)
chr6 (35-95)||(9077656-9077716)
chr6 (14-95)||(8052926-8053005)
chr6 (35-148)||(28863337-28863450)
chr6 (40-92)||(3046686-3046738)
chr6 (100-148)||(30438760-30438808)
[»] scaffold0070 (1 HSPs)
scaffold0070 (31-157)||(40153-40280)
[»] scaffold0136 (1 HSPs)
scaffold0136 (35-151)||(16543-16659)
[»] scaffold0238 (1 HSPs)
scaffold0238 (60-130)||(2539-2609)
[»] scaffold0236 (1 HSPs)
scaffold0236 (43-157)||(16677-16788)
[»] scaffold0123 (1 HSPs)
scaffold0123 (35-157)||(28105-28229)
[»] scaffold0778 (1 HSPs)
scaffold0778 (35-97)||(5290-5351)
[»] scaffold0086 (1 HSPs)
scaffold0086 (43-95)||(1507-1558)


Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 13 - 319
Target Start/End: Complemental strand, 15720350 - 15720045
Alignment:
Q  13 atacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatt 112  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  15720350 atacttcctctggtactatatatataagaa-catttaacttttttgattcattccataaataatgtatttgatctatattttataacaaatacatcaatt 15720252  T
Q  113 actctatgagtctaaaaagttaattttttcttataaataggaccgttagtagattcatccatatgtattatctcatgttcaaccctttctgaattgaaca 212  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15720251 actctataagtctaaaaagttaattttttcttataaataggaccgttagtagtttcatccatatgtattatctcatgttcaaccctttctgaattgaaca 15720152  T
Q  213 gatactgcagattctcttacaataactgaacactttcaatgttgttctatattttctaaatatcattaccacttgaaacctatttcaacttttggacttc 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15720151 gatactgcagattctcttacaataactgaacactttcaatgttgttctatattttctaaatatcattaccacttgaaacctatttcaacttttggacttc 15720052  T
Q  313 attcatt 319  Q
    |||||||    
T  15720051 attcatt 15720045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 7693051 - 7693173
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||  |||||||| |||| ||||||||| |||||||| |||| |||||||||| |    
T  7693051 tataagaaacattttacttttttgattcattgcataaatgatgtatttagtctatattttataccaaatacattaattactcaatgaatctaaaaagtca 7693150  T
Q  135 attttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||    
T  7693151 attttttcttataaataggaccg 7693173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 10839892 - 10839773
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||||||||||| | |||||| ||||||| ||||||||| ||||||||||||| ||| ||||| ||||| || |||| |||||||||| |    
T  10839892 tataagaaacatttaactttttga-ttcattgcataaatgatgtatttggtctatattctataccaagtacattaattattcaatgaatctaaaaagtca 10839794  T
Q  135 attttttcttataaataggac 155  Q
    |||||||||||||||||||||    
T  10839793 attttttcttataaataggac 10839773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 13 - 150
Target Start/End: Original strand, 16448787 - 16448922
Alignment:
Q  13 atacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatt 112  Q
    |||||||||||||| |||| ||||  |||||||||| |||||||| ||||||| ||||||| || |||||| | |||||||||||  | |||||||||||    
T  16448787 atacttcctccggtcctatttata--agaaacatttgacttttttgattcattgcataaatgatatatttggtttatattctatataagatacatcaatt 16448884  T
Q  113 actctatgagtctaaaaagttaattttttcttataaat 150  Q
    |||| |||| ||||||||||||| ||||||||||||||    
T  16448885 actcaatgaatctaaaaagttaaatttttcttataaat 16448922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 5031594 - 5031472
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||  ||||||||||| |  | ||||||||||||||  |||| | ||||||||||    
T  5031594 tataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatttaaaaagtta 5031495  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  5031494 aatttttcttataaataggaccg 5031472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 24618976 - 24619097
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||| ||| |||||||| ||||||| ||||||| ||||||||| ||||||||||||||||| ||||| |||||||| |||| ||| |||||| |    
T  24618976 tataagaaacctttgacttttttgattcattgcataaatgatgtatttggtctatattctataacaagtacattaattactcaatgaatct-aaaagtca 24619074  T
Q  135 attttttcttataaataggaccg 157  Q
    | || |||||||||||| |||||    
T  24619075 acttgttcttataaatatgaccg 24619097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 16008541 - 16008663
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||||||  ||| ||||||||||||||||| || |||||||| |  ||||||||||| ||||| || | ||||| |||| |    
T  16008541 tataagaaacatttgacttttttaatctattgcataaataatgtatttggtcaatattctagacaaaatacatcaagtactcaataaatctaagaagtca 16008640  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||| |||||||||    
T  16008641 aatttttcttatagataggaccg 16008663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 8793849 - 8793727
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||||||| ||||||| ||||||||  |||||||| || | |||||||||||||||||| |||| |||||||  | |    
T  8793849 tataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaatctaaaatatca 8793750  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||| ||||||||||| ||||    
T  8793749 acttttacttataaatagaaccg 8793727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 35149686 - 35149808
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||| ||| ||||||| ||||||||| ||||||||||| |  | |||||| |||||| | || | |||||||| | |    
T  35149686 tataagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaataaatctaaaaaatca 35149785  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  35149786 actttttcttataaataggaccg 35149808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 8453613 - 8453731
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||| ||||||||| | |||||| ||||||| |||||||||||||||| |||||||||||| |  | ||| ||||||||||| |||  |||||||| | |    
T  8453613 tataggaaacatttgaattttttgattcattacataaataatgtattt-atctatattctagacaagatatatcaattactcaatgtatctaaaaaatca 8453711  T
Q  135 attttttcttataaatagga 154  Q
    | ||||||||||||||||||    
T  8453712 aatttttcttataaatagga 8453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 10184579 - 10184685
Alignment:
Q  45 atttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttctt 144  Q
    |||| |||||||| |||||||  |||||| ||||||||| ||||||||||  | || |||||||||||| || |||| ||||||||||  ||||||||||    
T  10184579 atttgactttttttattcattgtataaatgatgtatttggtctatattctggatcatatacatcaattattcaatgaatctaaaaagtcgattttttctt 10184678  T
Q  145 ataaata 151  Q
    |||||||    
T  10184679 ataaata 10184685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 32597516 - 32597638
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| | ||||  ||||||||  |||||||| |||| ||  ||||| |||||||| |||| | | ||||||||    
T  32597516 tataagaaacatttgacttttttgattcattgcgtaaacgatgtattttgtctatattttataccacgtacattaattactcaatgaattttaaaagtta 32597615  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  32597616 actttttcttataaataagaccg 32597638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 40483301 - 40483423
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||||||||| || |||||||| |  | ||| ||||||||||| || | |  ||||||| |    
T  40483301 tataagaaatatttaacttttttaattcattgcataaatgatgtatttggtccatattctagataagatatatcaattactcaataaattgaaaaagtca 40483400  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||| |||||||| ||||    
T  40483401 aatttttctaataaatagaaccg 40483423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 24821909 - 24821969
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||| || |||||||||    
T  24821909 tataagaaacatttaacttttttaatttattacataaataatgtatttaatatatattcta 24821969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 8803358 - 8803236
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| ||||||||||||| ||||||| ||||||| ||||||||| ||||||||||| |  | |||||| ||||||   || | | ||||||||||    
T  8803358 tataaaaaatatttaacttttttgattcattacataaatgatgtatttggtctatattctagacaagatacattaattacataataaatataaaaagtta 8803259  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||| |||||| |||||    
T  8803258 actttttcttgtaaatatgaccg 8803236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 157
Target Start/End: Complemental strand, 1223247 - 1223131
Alignment:
Q  41 aaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagttaatttt 139  Q
    |||| ||| ||| |||||||||||| ||||||| ||||||||| |||||||| | | |||| |||||| |||||| | |||| |||||||||| | ||||    
T  1223247 aaacttttgactattttaattcattgcataaattatgtatttggtctatatttt-tgacaagatacattaattacacaatgaatctaaaaagtcactttt 1223149  T
Q  140 ttcttataaataggaccg 157  Q
    |||||||||||| |||||    
T  1223148 ttcttataaatatgaccg 1223131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 12 - 157
Target Start/End: Complemental strand, 35011364 - 35011220
Alignment:
Q  12 tatacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaat 111  Q
    |||||| |||||||| |||||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||| |||    
T  35011364 tatactccctccggtcctatatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaat 35011266  T
Q  112 tactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    || |  |||| |||||||| |||| |||||||||||||||||||||    
T  35011265 tattgaatgaatctaaaaaattaactttttcttataaataggaccg 35011220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 142
Target Start/End: Complemental strand, 3236465 - 3236353
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||| ||||||||| |||| ||||||||||||||||  |||||| ||||||||| |||| ||| || |  | |||||||||||| || |||| | |||||    
T  3236465 atatttataagaaatatttgacttttttaattcattgtataaatgatgtatttggtctaaattttaaactagatacatcaattattcaatgaatttaaaa 3236366  T
Q  130 agttaattttttc 142  Q
    ||| |||||||||    
T  3236365 agtcaattttttc 3236353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 34711199 - 34711095
Alignment:
Q  47 ttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttat 146  Q
    ||||||||||| ||| ||| ||| ||| ||||||||  | |||||| || |  ||||||||||||||||| |||| |||||||||| |||||||| ||||    
T  34711199 ttaacttttttgatttattgcattaatgatgtatttagtttatattttagacaaaatacatcaattactcaatgaatctaaaaagtcaatttttttttat 34711100  T
Q  147 aaata 151  Q
    |||||    
T  34711099 aaata 34711095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 154
Target Start/End: Original strand, 6354698 - 6354784
Alignment:
Q  68 ataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaatagga 154  Q
    |||| |||||||| |||| ||||||||| | | ||||||| ||||| || |||| |||||||| |||||| ||||||||||||||||    
T  6354698 ataattaatgtatatgatatatattctagatcgaatacataaattattcaatgaatctaaaaaattaattatttcttataaatagga 6354784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 6899553 - 6899428
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||||||||| |||||    |  ||||||||||| |  |||| ||| ||||    
T  6899553 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaa 6899455  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  6899454 gttaaatttttcttataaataggaccg 6899428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 36366039 - 36366164
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||| |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  36366039 tatatataagaaacaatttacttttttgattcattcaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 36366137  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     |||| |||||||||||||||||||||    
T  36366138 attaactttttcttataaataggaccg 36366164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 44796475 - 44796350
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  44796475 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctatgtacatcaattattgaatgaatctaaaaa 44796377  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  44796376 gttaactttttcttataaataggaccg 44796350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 15726778 - 15726896
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||| |||| | |||||||||| ||  ||||||| ||||||||  | |||||| || ||||| |||  |||||||||| |||| ||||||||||     
T  15726778 tataagaaatatttga-ttttttaatttatcgcataaatgatgtattttgtatatatttta-aacaagataagtcaattactcaatgaatctaaaaagtc 15726875  T
Q  134 aattttttcttataaatagga 154  Q
    |||||||||||||||||||||    
T  15726876 aattttttcttataaatagga 15726896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 12958909 - 12958787
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  12958909 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattgaatgaatctaaaaa 12958811  T
Q  131 gttaattttttcttataaatagga 154  Q
    ||||| ||||||||||||||||||    
T  12958810 gttaactttttcttataaatagga 12958787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 24915254 - 24915309
Alignment:
Q  102 atacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||||||| |  |||| |||||||||||||||||||| ||||||||||||||    
T  24915254 atacatcaattatttaatgaatctaaaaagttaattttttcatataaataggaccg 24915309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 30924801 - 30924728
Alignment:
Q  67 cataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttt 140  Q
    |||||||||| |||||| ||||||||||| | ||||||||||||||| |  || | |||||||||| |||||||    
T  30924801 cataaataatatatttggtctatattctagatcaaatacatcaattaattaataaatctaaaaagtcaattttt 30924728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 42786511 - 42786372
Alignment:
Q  14 tacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatta 113  Q
    ||||||||||||| |||||||||  ||||||| || ||||||| | || |||  |||  ||||||||||| ||||| |||||    || |||||||||||    
T  42786511 tacttcctccggtcctatatata--agaaacaatttactttttgattt-attgaatagttaatgtatttggtctat-ttctaagctaagtacatcaatta 42786416  T
Q  114 ctctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
     |  |||| ||||||||||||| ||||||||||||||| |||||    
T  42786415 ttgaatgaatctaaaaagttaactttttcttataaataagaccg 42786372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 883653 - 883752
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    ||||||||||| || ||||||| || |||||||| |||||| || |  ||||| || |||||| | || | |||||||||| || |||||||||||||||    
T  883653 ttttttaattcgttgcataaatgatatatttgatttatattttagacaaaatatattaattacacaatcaatctaaaaagtcaactttttcttataaata 883752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 118 - 157
Target Start/End: Complemental strand, 24178019 - 24177980
Alignment:
Q  118 atgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  24178019 atgaatctaaaaagttaactttttcttataaataggaccg 24177980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 14 - 148
Target Start/End: Complemental strand, 29690585 - 29690453
Alignment:
Q  14 tacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaatt 112  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||  ||||||  |||| | |||||| |  |||||||| ||||| || |||||| ||||    
T  29690585 tacttcctccggtcct-tat-tataagaaacaattaacttttttggttcattgtataagtgatgtatctagtctatatt-tataataagatacattaatt 29690489  T
Q  113 actctatgagtctaaaaagttaattttttcttataa 148  Q
    | |||||||  ||||||||| | |||||||||||||    
T  29690488 attctatgaacctaaaaagtcagttttttcttataa 29690453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 24822829 - 24822863
Alignment:
Q  123 tctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||||| ||||||||||||||||||||||||    
T  24822829 tctaaaaagtcaattttttcttataaataggaccg 24822863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 47 - 92
Target Start/End: Original strand, 8840845 - 8840890
Alignment:
Q  47 ttaacttttttaattcattccataaataatgtatttgatctatatt 92  Q
    |||| ||||| ||||||||||||||||||| |||||||| ||||||    
T  8840845 ttaattttttaaattcattccataaataatatatttgatttatatt 8840890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 24478537 - 24478460
Alignment:
Q  53 tttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||| ||| ||| |||||| ||| ||||||||||||||| || |  ||||||||||||||||| |||  ||||||||    
T  24478537 tttttgatttattgcataaaaaatatatttgatctatattataaattaaatacatcaattactcaatggctctaaaaa 24478460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 35 - 71
Target Start/End: Original strand, 13013988 - 13014024
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataa 71  Q
    |||||||||||||| |||||||||||||||| |||||    
T  13013988 tataagaaacattttacttttttaattcattgcataa 13014024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 13831443 - 13831499
Alignment:
Q  100 aaatacatcaattactctatgagtctaaaaagttaa-ttttttcttataaataggac 155  Q
    |||||||||||||| |  |||| |||||||||| || ||||||||||||||||||||    
T  13831443 aaatacatcaattatttaatgaatctaaaaagtcaatttttttcttataaataggac 13831499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 43332616 - 43332568
Alignment:
Q  109 aattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||| |||| |||||||||| ||  ||||||||||||||||||||    
T  43332616 aattactcaatgaatctaaaaagtcaaaattttcttataaataggaccg 43332568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 31 - 152
Target Start/End: Original strand, 11030206 - 11030327
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||||||||| || ||||||||||||||| |||| ||||||||    
T  11030206 tatatataagaaacatttgacttttttgattcattacataaatgatgtatttggtctatattctatatcagatacatcaattactcaatgaatctaaaaa 11030305  T
Q  131 gttaattttttcttataaatag 152  Q
    ||||||||||||||||||||||    
T  11030306 gttaattttttcttataaatag 11030327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 38554476 - 38554598
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| ||| |||| ||||||| ||||||||||||||||| ||||||||||||| ||| ||||| |||||||| |||| | ||||||||||    
T  38554476 tataagaaacatttgactattttgattcattacataaataatgtatttggtctatattctataccaagtacattaattactcaatgaatttaaaaagtta 38554575  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  38554576 actttttcttataaataggaccg 38554598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 41153129 - 41153248
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| |||||||| || | |||||||||||||||||| |||| |||||||||| |    
T  41153129 tataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattataaaccaaatacatcaattactcaatgaatctaaaaagtca 41153228  T
Q  135 attttttcttataaatagga 154  Q
    | ||||||||||||||||||    
T  41153229 actttttcttataaatagga 41153248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 22333543 - 22333664
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||| |||| ||| || || |||||||| |||| |||||||||| |    
T  22333543 tataagaaacattaaacttttttgattcattgcataaataatgtatttgatctatattatatatcaagtatattaattactcaatgaatctaaaaagtca 22333642  T
Q  135 attttttcttataaataggacc 156  Q
    ||||||||| |||| |||||||    
T  22333643 attttttctaataactaggacc 22333664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 20555387 - 20555266
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| |  | |||||||||||| || |||  |||||||| |||    
T  20555387 tataggaaacatttaactttttta-ttcattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaatta 20555289  T
Q  135 attttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||    
T  20555288 attttttcttataaataggaccg 20555266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 12962835 - 12962714
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| |||||||| |||| ||| ||||| |||||||| |||| |||||||||| |    
T  12962835 tataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattttataccaagtacattaattactcaatgaatctaaaaagtca 12962736  T
Q  135 attttttcttataaataggacc 156  Q
    | ||||||||||||||| ||||    
T  12962735 actttttcttataaataagacc 12962714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 11182179 - 11182306
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||| ||||||| |||||||| ||||||||||||||| |||||||||||  |||||||||| || ||||||||||||||| || | | ||||||    
T  11182179 tatatataagcaacatttgacttttttgattcattccataaatgatgtatttgattcatattctatatcatatacatcaattactcaataaatttaaaaa 11182278  T
Q  131 gttaa-ttttttcttataaataggaccg 157  Q
    ||||| |||||| ||||||||| |||||    
T  11182279 gttaattttttttttataaatatgaccg 11182306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 5109493 - 5109371
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| |||||    |||||| ||||||||   |||||||||||| ||||||||| |||||||| |||| ||||||||||||    
T  5109493 tataagaaatatttgacttttttgattcaaagtataaattatgtatttagcctatattctataccaaatacattaattactcaatgaatctaaaaagtta 5109394  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  5109393 actttttcttataaataggaccg 5109371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 28248951 - 28249068
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||| ||| ||||||||||||||||  ||||||||||||| ||||||||| ||||| |  |||| |||||||||| |    
T  28248951 tataagaaatatttgacttttttgattaattgcataaataatgtatttagtctatattctataccaaatacattaattatttaatgaatctaaaaagtca 28249050  T
Q  135 attttttcttataaatag 152  Q
    | ||||||||||||||||    
T  28249051 actttttcttataaatag 28249068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 4410795 - 4410916
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||||||||||| ||||| ||| ||| ||||||| |||||||||||||||||| || ||||| |||||| |||||| | |||| ||||||||||     
T  4410795 tataagaaacatttaacctttttgatttattgcataaatgatgtatttgatctatatttta-aacaagatacattaattacacaatgaatctaaaaagtc 4410893  T
Q  134 aa-ttttttcttataaataggac 155  Q
    || ||||||||||||||||||||    
T  4410894 aacttttttcttataaataggac 4410916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 29 - 154
Target Start/End: Complemental strand, 12873859 - 12873734
Alignment:
Q  29 tatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaa 128  Q
    ||||| ||||| ||| |||| ||||| || ||||||| ||||||| ||||||||  ||||||||||||| ||||||||| |||||||  |||| ||||||    
T  12873859 tatatttataaaaaatatttgactttattgattcattgcataaatgatgtatttagtctatattctataccaaatacattaattacttaatgaatctaaa 12873760  T
Q  129 aagttaattttttcttataaatagga 154  Q
    |||| || ||||||||||||| ||||    
T  12873759 aagtcaactttttcttataaaaagga 12873734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 150
Target Start/End: Original strand, 32457231 - 32457346
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||||||| ||||||| ||||||||  ||||||||||| |  | ||||||||||||||  |||| |||||||||| |    
T  32457231 tataagaaatatttgacttttttgattcattgcataaatgatgtatttagtctatattctagacaagatacatcaattacttaatgaatctaaaaagtca 32457330  T
Q  135 attttttcttataaat 150  Q
    | ||||||||||||||    
T  32457331 aatttttcttataaat 32457346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 11794579 - 11794461
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| || |||||  |||||  ||||||| |||||||||||||| |||||||| ||| ||||| ||||| || || | |||||||| | |    
T  11794579 tataagaaacattttacatttttgtttcatggcataaatgatgtatttgatctacattctataccaagtacattaattattcaataaatctaaaaaatca 11794480  T
Q  135 attttttcttataaatagg 153  Q
    |||||||||||||||||||    
T  11794479 attttttcttataaatagg 11794461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 29169853 - 29169969
Alignment:
Q  35 tataagaaacatttaactttt-ttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||| |||| |||||| ||||||||||   ||||| ||||||||||||||||||||| |||||||| ||||||||||| || | | ||||||||     
T  29169853 tataagaaatatttgactttttttaattcattgtctaaatgatgtatttgatctatattcta-aacaaatatatcaattactcaataaatttaaaaagtc 29169951  T
Q  134 aattttttcttataaata 151  Q
    || |||||||||||||||    
T  29169952 aaatttttcttataaata 29169969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 38 - 151
Target Start/End: Complemental strand, 29989019 - 29988906
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    ||||||||||| |||||||| ||||||| ||||||| ||||||||||||||||||||| |  ||||| || |||||| | |||| | |||||| | ||||    
T  29989019 aagaaacatttgacttttttgattcattgcataaatgatgtatttgatctatattctagacaaaatatattaattacacaatgaatataaaaaatcaatt 29988920  T
Q  138 ttttcttataaata 151  Q
    |||| |||||||||    
T  29988919 tttttttataaata 29988906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 155
Target Start/End: Complemental strand, 39445110 - 39445005
Alignment:
Q  50 acttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaa 149  Q
    |||||||||||| ||| |||||||  ||||||| |||||||||||| |  ||||||||||||||||| |||| ||| |||||| || ||||||||||| |    
T  39445110 acttttttaatttattgcataaatggtgtatttaatctatattctagacaaaatacatcaattactcaatgaatcttaaaagtcaaatttttcttatata 39445011  T
Q  150 taggac 155  Q
    ||||||    
T  39445010 taggac 39445005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 7943438 - 7943580
Alignment:
Q  14 tacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatta 113  Q
    ||||||||||||| || ||| ||||||| | |||| |||||||| ||||||| ||||||| || |||||| |||||||| || |  | ||||||||||||    
T  7943438 tacttcctccggt-ct-tatttataagagatatttgactttttttattcattgcataaatgatatatttggtctatattgtagacaagatacatcaatta 7943535  T
Q  114 ctctatgagtctaaaaagttaa-ttttttcttataaataggaccg 157  Q
     || |||| |||||||||| || ||||||||||||||||||||||    
T  7943536 ttcaatgaatctaaaaagtcaatttttttcttataaataggaccg 7943580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 30758738 - 30758858
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||||||| |||||||  |||||||| |||||| | || |  | ||||||||||||||| || | |||||||||| |    
T  30758738 tataagaaatatttgactttttttattcattgcataaatggtgtatttggtctatactttagacaagatacatcaattactcaataa-tctaaaaagtca 30758836  T
Q  135 attttttcttataaataggacc 156  Q
    | ||||||||||||||||||||    
T  30758837 aatttttcttataaataggacc 30758858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 38983017 - 38983137
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| |||||||| ||||||| ||||||| ||||||||  ||||||||||| |  | ||||||||||||| | |||| |||||||| | |    
T  38983017 tataaaaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattctagacaagatacatcaattacacaatgaatctaaaaaatca 38983116  T
Q  135 attttttcttataaataggac 155  Q
    | ||||| |||||||||||||    
T  38983117 acttttttttataaataggac 38983137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 9152400 - 9152519
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    ||||||||||| |||||||| | |||||  |||| | ||||||||| |||||||| || |  | ||||||||||||||| |||| |||||||||| ||||    
T  9152400 aagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactcaatgaatctaaaaagtcaatt 9152499  T
Q  138 ttttcttataaataggaccg 157  Q
     |||||| |||||| |||||    
T  9152500 gtttcttgtaaataagaccg 9152519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 151
Target Start/End: Original strand, 5281206 - 5281311
Alignment:
Q  45 atttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttctt 144  Q
    |||| |||||||| ||||||| ||||||| |||||||||||||||||| |||| ||||||||| ||||||   || | | |||||||| || ||||||||    
T  5281206 atttgacttttttgattcattgcataaatgatgtatttgatctatattttataccaaatacattaattacaaaat-aatataaaaagtcaactttttctt 5281304  T
Q  145 ataaata 151  Q
    |||||||    
T  5281305 ataaata 5281311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 30761508 - 30761386
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| || |||  ||||||||  ||||||||||| |  | ||| || |||||||| |||| | |||||||| |    
T  30761508 tataagaaacatttgacttttttgattcattgcacaaaatatgtatttagtctatattctagacaagataaattaattactcaatgaatgtaaaaagtca 30761409  T
Q  135 attttttcttataaataggaccg 157  Q
    | | |||||||||||||||||||    
T  30761408 aatgtttcttataaataggaccg 30761386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45571163 - 45571038
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45571163 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45571065  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45571064 gttaattttttcttataaataggaccg 45571038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45574830 - 45574705
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45574830 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45574732  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45574731 gttaattttttcttataaataggaccg 45574705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45578497 - 45578372
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45578497 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45578399  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45578398 gttaattttttcttataaataggaccg 45578372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45582164 - 45582039
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45582164 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45582066  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45582065 gttaattttttcttataaataggaccg 45582039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45585831 - 45585706
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45585831 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45585733  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45585732 gttaattttttcttataaataggaccg 45585706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45589498 - 45589373
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45589498 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45589400  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45589399 gttaattttttcttataaataggaccg 45589373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45593165 - 45593040
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45593165 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45593067  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45593066 gttaattttttcttataaataggaccg 45593040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45596832 - 45596707
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45596832 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45596734  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45596733 gttaattttttcttataaataggaccg 45596707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45600499 - 45600374
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45600499 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45600401  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45600400 gttaattttttcttataaataggaccg 45600374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45604166 - 45604041
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45604166 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45604068  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45604067 gttaattttttcttataaataggaccg 45604041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45607833 - 45607708
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45607833 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45607735  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45607734 gttaattttttcttataaataggaccg 45607708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45611500 - 45611375
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45611500 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45611402  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45611401 gttaattttttcttataaataggaccg 45611375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45615167 - 45615042
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45615167 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 45615069  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||||||    
T  45615068 gttaattttttcttataaataggaccg 45615042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 34447522 - 34447642
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| ||||||||| |||||| ||||||||||||||||| | |||||| || |  | ||||||  ||||| | |||| |||||||| | |    
T  34447522 tataagaaa-atttgacttttttagttcattgcataaataatgtatttggtttatattttagacaagatacattgattacacaatgaatctaaaaaatca 34447620  T
Q  135 attttttcttataaataggacc 156  Q
    | ||||||||||||||||||||    
T  34447621 actttttcttataaataggacc 34447642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 36881654 - 36881541
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    ||||||||||| |||||||| ||||||| ||||||||||| ||||| ||||||||       | |||||| |||||||| |||  |||||||||| || |    
T  36881654 aagaaacatttgacttttttgattcattacataaataatgaatttggtctatatt------aagatacattaattactcaatgtatctaaaaagtcaaat 36881561  T
Q  138 ttttcttataaataggaccg 157  Q
    ||||||||||||||| ||||    
T  36881560 ttttcttataaatagaaccg 36881541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 116
Target Start/End: Original strand, 3837427 - 3837509
Alignment:
Q  34 atataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactc 116  Q
    ||||||||||||||| | |||||| ||||||| ||||||||||||||||| |||||||| || ||||| ||| |||||||||||    
T  3837427 atataagaaacatttgatttttttgattcattgcataaataatgtatttggtctatatttta-aacaagatagatcaattactc 3837509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 157
Target Start/End: Original strand, 3838414 - 3838557
Alignment:
Q  11 ttatacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaa 110  Q
    ||||||||||||| || |||||||||  ||||||| || |||||||| |||||||  |||  | ||||||||| ||||| ||||| |  || ||||||||    
T  3838414 ttatacttcctccagtcctatatata--agaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctagacgaagtacatcaa 3838510  T
Q  111 ttactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    | | |  |||| ||||||||||||| |||||||||||||||| ||||    
T  3838511 tcattgaatgaatctaaaaagttaactttttcttataaatagaaccg 3838557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 7833416 - 7833290
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| |||| |||||  ||| |||  |||  |||||||| ||||||||||| || | || |||||||||||| || |||| ||||||||    
T  7833416 tatatataagaaacacttaattttttagatttattaaatagttaatgtatctgatctatattttaaatcagatacatcaattattcaatgaatctaaaaa 7833317  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     || ||| ||||||||| ||| |||||    
T  7833316 attgattgtttcttatatataagaccg 7833290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 45034531 - 45034406
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  45034531 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatctaaaaa 45034433  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  45034432 gttaactttttcttataaataggaccg 45034406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 42698082 - 42698198
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||| ||||| ||||||| ||||||   ||||||||| | |||| ||| ||||||| | ||| ||||||||||||||| |||| ||||||||||     
T  42698082 tataagaaatatttagctttttttattcatggtataaataatatgtttggtctttattcta-agcaagatacatcaattactcaatgaatctaaaaagtc 42698180  T
Q  134 aattttttcttataaata 151  Q
    || ||||| |||||||||    
T  42698181 aaattttttttataaata 42698198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 2936423 - 2936300
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa--gt 132  Q
    |||||||||||||| |||||||| |||||||  ||| || || |||||  ||||||||||||| ||| ||||| |||||||| |||| ||| ||||        
T  2936423 tataagaaacatttgacttttttgattcattggatagatgatatatttagtctatattctataccaagtacattaattactcaatgaatctcaaaaccaa 2936324  T
Q  133 taattttttcttataaataggacc 156  Q
    || |||||| ||||||||||||||    
T  2936323 tattttttttttataaataggacc 2936300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 35728482 - 35728600
Alignment:
Q  35 tataagaaacatttaa-cttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagt 132  Q
    ||||||||| |||| | ||||||| ||||||| ||||||| || |||||| ||||||||||| ||||| |||||||||||| || |||| | |||||||     
T  35728482 tataagaaatatttgatcttttttgattcattgcataaatgatatatttggtctatattcta-aacaagatacatcaattattcaatgaatttaaaaagc 35728580  T
Q  133 taattttttcttataaatag 152  Q
     || ||||| ||||||||||    
T  35728581 caaattttttttataaatag 35728600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 29 - 151
Target Start/End: Complemental strand, 33824486 - 33824364
Alignment:
Q  29 tatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaa 128  Q
    ||||| ||||||||| |||| |||||| | |||||||  |||||| || ||||| || |||||| || |  | ||| ||||||||||| |||| | ||||    
T  33824486 tatatttataagaaatatttgacttttctgattcattgtataaatgatatatttaatatatattttagacaagatatatcaattactcaatgaatttaaa 33824387  T
Q  129 aagttaattttttcttataaata 151  Q
    |||| || |||||||||||||||    
T  33824386 aagtcaaatttttcttataaata 33824364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 43713992 - 43714113
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||| || | |||||| |||||||  |||||| ||||||||| |||||||| || |  | |||||||||||||||  | | |||||||||| |    
T  43713992 tataagaaacaattgatttttttgattcattgaataaattatgtatttggtctatatt-tagacaagatacatcaattactcagtaaatctaaaaagtca 43714090  T
Q  135 attttttcttataaataggaccg 157  Q
    |   |||||||||||||||||||    
T  43714091 aaaatttcttataaataggaccg 43714113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 156
Target Start/End: Complemental strand, 5559425 - 5559372
Alignment:
Q  103 tacatcaattactctatgagtctaaaaagttaattttttcttataaataggacc 156  Q
    |||||||||||||| |||| |||||||||| || ||||||||||||||| ||||    
T  5559425 tacatcaattactcaatgaatctaaaaagtcaaatttttcttataaatatgacc 5559372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 10205056 - 10204936
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| ||| |||| |||||||  |||||| ||||||||  |||||||| || |  | ||||||||||| ||| |||| ||||||||| ||    
T  10205056 tataagaaatatttgactcttttgattcattgtataaatgatgtatttagtctatattttagacaagatacatcaattgctcaatgaatctaaaaag-ta 10204958  T
Q  135 attttttcttataaataggacc 156  Q
    |  |||||||||||||| ||||    
T  10204957 aaattttcttataaatatgacc 10204936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 12486074 - 12486131
Alignment:
Q  99 caaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggacc 156  Q
    ||||||||||||||| || |||| |||||||||| |||| |||||| |||||||||||    
T  12486074 caaatacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggacc 12486131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 28494834 - 28494757
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatt 112  Q
    |||||||||||||| | |||||| ||||||| ||||||| || |||||| ||||||||||| |  | |||||||||||    
T  28494834 tataagaaacatttgatttttttgattcattgcataaatgatatatttggtctatattctagacaatatacatcaatt 28494757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 95
Target Start/End: Complemental strand, 37670445 - 37670388
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    ||||||||||| | |||||||||||||| |||||||||| |||||| | |||||||||    
T  37670445 aagaaacatttgatttttttaattcattgcataaataatctatttggtatatattcta 37670388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 32487120 - 32487064
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatat 91  Q
    ||||||||  |||| |||||||| ||||||| ||||||||||||||||| |||||||    
T  32487120 tataagaagtatttgacttttttgattcattgcataaataatgtatttggtctatat 32487064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 14803123 - 14803068
Alignment:
Q  75 atgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||||||||||| || | ||||||||||||||| ||||| | ||||||||    
T  14803123 atgtatttgatctatattatagatcaaatacatcaattattctataaatctaaaaa 14803068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 28014403 - 28014348
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctata 90  Q
    |||||||||||||| || ||||| ||||||| ||||||| ||||||||| ||||||    
T  28014403 tataagaaacatttgaccttttttattcattgcataaatgatgtatttggtctata 28014348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 920536 - 920484
Alignment:
Q  43 acatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    |||||| |||||||| ||| ||| ||||||||||||||||  |||||||||||    
T  920536 acatttgacttttttgatttatttcataaataatgtatttagtctatattcta 920484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 4e-38; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 29365639 - 29365759
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||| |    
T  29365639 tataagaaacatttgacttttttaatacattgcataaatgatgtatttgatctatattctataccaaatacattaattactcaatgaatctaaaaagtca 29365738  T
Q  135 attttttcttataaataggac 155  Q
    ||||||||||||| |||||||    
T  29365739 attttttcttatatataggac 29365759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 35 - 155
Target Start/End: Original strand, 36245394 - 36245514
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||||||| |  | ||||||||||||||| |||| |||||||||| |    
T  36245394 tataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagtca 36245493  T
Q  135 attttttcttataaataggac 155  Q
    |||||||||||||||||||||    
T  36245494 attttttcttataaataggac 36245514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 8566099 - 8566221
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||| |  | ||||||||||||||| |||| |||||||| | |    
T  8566099 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaaatca 8566198  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  8566199 aatttttcttataaataggaccg 8566221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 28677335 - 28677454
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||||||| |  | ||||||||||||||| || | |||||||||| |    
T  28677335 tataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacatcaattactcaataaatctaaaaagtca 28677434  T
Q  135 attttttcttataaatagga 154  Q
    ||||||||||||||||||||    
T  28677435 attttttcttataaatagga 28677454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 158
Target Start/End: Complemental strand, 41850726 - 41850603
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| |||||||| |||| ||||||||| ||||| || |||| |||||||| |||    
T  41850726 tataagaaacattttacttttttgattcattgcataaatgatgtatttgctctatattttataccaaatacattaattattcaatgaatctaaaaaatta 41850627  T
Q  135 attttttcttataaataggaccgt 158  Q
    | ||||||||||||||| ||||||    
T  41850626 actttttcttataaataagaccgt 41850603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 6 - 157
Target Start/End: Original strand, 11668006 - 11668155
Alignment:
Q  6 gtagattatacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatac 105  Q
    |||| ||||||| |||||||| |||| ||||  |||||||||| |||||||| ||||||| ||||||| || |||||||||||||||||| |  | ||||    
T  11668006 gtaggttatactccctccggtcctatttata--agaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatac 11668103  T
Q  106 atcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||| || |||| | |||||||| || |||||||||||||||||||||    
T  11668104 atcaattaatcaatgaatgtaaaaagtcaaatttttcttataaataggaccg 11668155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 2523788 - 2523910
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||  |||||| || ||||||||||||  ||| ||||| |||||||| |||| |||||||||| |    
T  2523788 tataagaaacatttgacttttttgattcattgcataaacgatgtatctggtctatattctatgccaagtacattaattactcaatgaatctaaaaagtca 2523887  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  2523888 actttttcttataaataggaccg 2523910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 32811724 - 32811849
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||| || |||| ||||||||| || ||||||||||| ||||||||| || |||||||||| || ||| ||||||||||| |||| ||||||||    
T  32811724 tatatataagcaatatttgactttttta-ttaattccataaatgatgtatttggtccatattctataccatataaatcaattactcaatgaatctaaaaa 32811822  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     ||||||||||||||||||| ||||||    
T  32811823 attaattttttcttataaattggaccg 32811849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 48838442 - 48838347
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||| |||| ||||||||| |||| ||| |||| ||||||||    
T  48838442 tataagaaacatttaacttttttaattcattacataaatgatgtatttggtctatattttataccaaatacattaattgctcaatgaatctaaaaa 48838347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 45533360 - 45533247
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||||| ||||||||||| |  | |||||| ||||||   |||| |||||||||| |    
T  45533360 tataagaaacatttgacttttttaattcattgtataaataatgtatttggtctatattctagacaagatacattaattacataatgaatctaaaaagtca 45533261  T
Q  135 attttttcttataa 148  Q
    ||||||||||||||    
T  45533260 attttttcttataa 45533247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 39153305 - 39153425
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||  |||||||| || | |||||||||||||||||| ||||  ||||||||| |    
T  39153305 tataagaaacatttgacttttttgattcattgcataaatgatgtatttagtctatattatagaccaaatacatcaattactcaatgaagctaaaaagtca 39153404  T
Q  135 attttttcttataaataggaccg 157  Q
    ||||||  ||||||||| |||||    
T  39153405 attttt--ttataaataagaccg 39153425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 2610316 - 2610195
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||| | || |||||||||||||| ||||||| ||||||||  ||||||||||| | |||||||||||||||||| |||| | |||||| | |    
T  2610316 tataagaaacaatgaa-ttttttaattcattgcataaatgatgtatttagtctatattctagaccaaatacatcaattactcaatgaatttaaaaaatca 2610218  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||| ||||||    
T  2610217 aatttttcttataaatcggaccg 2610195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 13807368 - 13807250
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| || ||||||||||||||||||    ||  | ||||||||||| |||| |||||||||| |    
T  13807368 tataagaaacatttgacttttttgattcattacataaatgatatatttgatctatattcta----aagaagatcaattactcaatgaatctaaaaagtca 13807273  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  13807272 actttttcttataaataagaccg 13807250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 30869204 - 30869325
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||| ||||||||| || ||||| ||| |||  |||||||||||||||| ||||||||||| |  | ||||||||||||||| |||| |||||||||| |    
T  30869204 tatatgaaacatttgacgtttttgatttattgtataaataatgtatttggtctatattctagacaagatacatcaattactcaatgaatctaaaaagtca 30869303  T
Q  135 attttttcttataaataggacc 156  Q
    |  |||||||||||||||||||    
T  30869304 aaattttcttataaataggacc 30869325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 30823821 - 30823722
Alignment:
Q  53 tttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaatag 152  Q
    ||||| |||||||  |||||||||||||||| ||||||||||||| ||||||||| |||| ||| |||| |||||||||| ||  |||||||||||||||    
T  30823821 ttttttattcattatataaataatgtatttggtctatattctataccaaatacattaatttctcaatgaatctaaaaagtcaaaattttcttataaatag 30823722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 24163399 - 24163276
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||||||||||| ||||||| |||||| || |||||||||||    | |||||| |||||  | |||| |||||||||| |    
T  24163399 tataagaaacatttcacttttttaattcattgcataaatgatgtatatggtctatattctacgcaagatacattaattatacaatgaatctaaaaagtaa 24163300  T
Q  135 a-ttttttcttataaataggaccg 157  Q
    | ||||||| ||||||||||||||    
T  24163299 atttttttcctataaataggaccg 24163276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 10007611 - 10007716
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||| ||||||| ||||||| ||||||||| ||||||||||| |  | |||||| |||||  | |||| |||||||||| || |||||||||||||||    
T  10007611 tttttttattcatttcataaattatgtatttggtctatattctacacaagatacattaattatacaatgaatctaaaaagtcaactttttcttataaata 10007710  T
Q  152 ggaccg 157  Q
    ||||||    
T  10007711 ggaccg 10007716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 40142797 - 40142913
Alignment:
Q  41 aaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagttaatttt 139  Q
    |||||||| |||||||| ||||||| ||||||||||||||||| ||||||| ||| ||||| |||||| |||||  | || | |||||||| | ||||||    
T  40142797 aaacatttgacttttttgattcattgcataaataatgtatttggtctatatccta-aacaagatacattaattatacaataaatctaaaaaatcaatttt 40142895  T
Q  140 ttcttataaataggaccg 157  Q
    |||||||| |||||||||    
T  40142896 ttcttatacataggaccg 40142913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 6838505 - 6838385
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||||||| |  | |||||| |||||||| |||| ||  ||||   |    
T  6838505 tataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattactcaatgaatc--aaaaacca 6838408  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  6838407 aatttttcttataaatatgaccg 6838385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 32811392 - 32811517
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||| | ||||||||| ||||| |||||    |  |||||||||||||  |||| ||||||||    
T  32811392 tatatataagaaacaatttacttttttgattcattgaataattgatgtatttggtctat-ttctaggctaggtacatcaattactgaatgaatctaaaaa 32811490  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     |||| |||||||||||||||||||||    
T  32811491 attaactttttcttataaataggaccg 32811517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 40176054 - 40176160
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| |||||||| |||||||| ||||||| | ||||| ||||||||| ||||||||||| | ||| ||||| |||| ||  |||| |||||||||| |    
T  40176054 tataaaaaacatttcactttttttattcattgcttaaatgatgtatttggtctatattctaaaccaagtacattaatttcttaatgaatctaaaaagtca 40176153  T
Q  135 atttttt 141  Q
    |||||||    
T  40176154 atttttt 40176160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 44682679 - 44682574
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||| ||||||| ||||||| || |||||| |||||| |||| |  |||||||||| |||||  |||| ||| |||||| || |||||||||||||||    
T  44682679 ttttttgattcattgcataaatgatatatttggtctataatctagacaaaatacatcagttacttaatgaatctcaaaagtcaaatttttcttataaata 44682580  T
Q  152 ggaccg 157  Q
    ||||||    
T  44682579 ggaccg 44682574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 155
Target Start/End: Complemental strand, 4826895 - 4826772
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    || ||||||||||| |  |||| ||||||||    
T  4826895 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaagtacatcaattattgaatgaatctaaaaa 4826797  T
Q  131 gttaattttttcttataaataggac 155  Q
    ||||| |||||||||||||||||||    
T  4826796 gttaactttttcttataaataggac 4826772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 41395680 - 41395793
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||||| |||||||||||||||||||  |||| | |||||| |  |||||||| ||||| || ||| || ||||| ||||||| ||||||||||     
T  41395680 tataagaaacaattaacttttttaattcattgtataagtgatgtatctagtctatatt-tataataagatatattaattattctatgaatctaaaaagtc 41395778  T
Q  134 aattttttcttataa 148  Q
    || ||||||||||||    
T  41395779 aactttttcttataa 41395793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 149
Target Start/End: Original strand, 45441454 - 45441568
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||| |||| |||| |||||||| ||| |||  ||| || ||||||||||||||||||||| |  | ||||| |||||| ||  ||| ||||||||||||    
T  45441454 tatatgaaatatttgacttttttgatttattgtatagatgatgtatttgatctatattctagacaagatacaccaattattcattgaatctaaaaagtta 45441553  T
Q  135 attttttcttataaa 149  Q
    ||||||| |||||||    
T  45441554 atttttttttataaa 45441568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 48082928 - 48082808
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| |||||||| ||||||| |||||||  |||||||| ||||||||||| |    |||||| |||||| | |||| |||||||||| |    
T  48082928 tataataaatatttgactttttttattcattacataaatggtgtatttg-tctatattctacacatgatacattaattacacaatgaatctaaaaagtca 48082830  T
Q  135 attttttcttataaataggacc 156  Q
    | ||||||||||||||| ||||    
T  48082829 actttttcttataaataagacc 48082808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 2680876 - 2680936
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    ||||||||| |||| |||||||| |||||||  |||||| |||||||||||||||||||||    
T  2680876 tataagaaatatttgacttttttgattcattatataaatgatgtatttgatctatattcta 2680936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 10462506 - 10462391
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||| |  ||||||| |||||| ||||||| ||||||||| | |||||| || |  | |||||||||| |||| |||| |||||||||| |    
T  10462506 tataagaaacattgacatttttta-ttcattgcataaatgatgtatttggtatatattttagacaagatacatcaatcactcaatgaatctaaaaagtca 10462408  T
Q  135 attttttcttataaata 151  Q
      |||||||||||||||    
T  10462407 catttttcttataaata 10462391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 28298984 - 28298924
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    ||||| |||||||| |||||||| ||||||| |||||||| | ||||||||||||||||||    
T  28298984 tataaaaaacatttgacttttttgattcattgcataaatagtatatttgatctatattcta 28298924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 2399970 - 2400048
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatta 113  Q
    |||||||||||||| |||||||| |||||||  |||||| |||||||| ||||||||| || |  | ||||||||||||    
T  2399970 tataagaaacatttgacttttttgattcattgtataaatgatgtatttaatctatattttagactagatacatcaatta 2400048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 27231919 - 27231973
Alignment:
Q  103 tacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    ||||||||||| |  |||| ||||||||||||| |||||||||||||||||||||    
T  27231919 tacatcaattattgaatgaatctaaaaagttaactttttcttataaataggaccg 27231973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 31227626 - 31227501
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    ||||||||||| || |  |||| ||||||||    
T  31227626 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaaatacatcaactattgaatgaatctaaaaa 31227528  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     |||| ||||||||||||||| |||||    
T  31227527 attaactttttcttataaataagaccg 31227501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 9979819 - 9979934
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| ||| |||| ||| |||| |||||| ||||||||  || |||||||| |  | |||||| |||||||| || | |||||||||| |    
T  9979819 tataagaaatatttgactattttgatttattc-ataaatgatgtatttagtcaatattctagacaagatacatgaattactcaataaatctaaaaagtca 9979917  T
Q  135 attttttcttataaata 151  Q
    | |||||||||||||||    
T  9979918 aatttttcttataaata 9979934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 147
Target Start/End: Original strand, 34117981 - 34118069
Alignment:
Q  59 attcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttata 147  Q
    ||||||| ||||||| ||||||||| ||||||||||| |  | |||||| |||||| | |||| | |||||||| || |||||||||||    
T  34117981 attcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatttaaaaagtcaactttttcttata 34118069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 31 - 74
Target Start/End: Original strand, 21124478 - 21124521
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaata 74  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||    
T  21124478 tatatataagaaacattttacttttttgattcattgcataaata 21124521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 152
Target Start/End: Complemental strand, 4925953 - 4925904
Alignment:
Q  103 tacatcaattactctatgagtctaaaaagttaattttttcttataaatag 152  Q
    |||||||||||||  |||| |||||||||| || ||||||||||||||||    
T  4925953 tacatcaattacttaatgaatctaaaaagtcaaatttttcttataaatag 4925904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 28020067 - 28020010
Alignment:
Q  99 caaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggacc 156  Q
    |||||||||||| || || |||| || ||||||| |||| ||||||||||||||||||    
T  28020067 caaatacatcaactattcaatgaatcaaaaaagtaaattgtttcttataaataggacc 28020010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 148
Target Start/End: Complemental strand, 33901189 - 33901055
Alignment:
Q  12 tatacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaa 110  Q
    ||||||||||||||| || ||| |||||||||||||| |||||||  |||||||   ||||| |||||| |  |||||||| |||||||| |||||| ||    
T  33901189 tatacttcctccggt-ctttat-tataagaaacatttgactttttagattcattatgtaaatgatgtatctagtctatatt-tataacaagatacattaa 33901093  T
Q  111 ttactctatgagtctaaaaagttaattttttcttataa 148  Q
     || ||||||| || ||||| | |||| ||||||||||    
T  33901092 ctattctatgaatcaaaaaaatcaattgtttcttataa 33901055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 45123375 - 45123263
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||| | ||||||||||| |||||||  |||| | |||||| | ||||||||| ||||| || |||||| ||||| ||||||| | ||||||||     
T  45123375 tataagaaataattaacttttttgattcattgtataagtgatgtatctaatctatatt-tataataagatacattaattattctatgaatttaaaaagtc 45123277  T
Q  134 aattttttcttata 147  Q
    || ||||| |||||    
T  45123276 aacttttttttata 45123263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 3e-36; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 38590080 - 38590208
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||||| ||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||| || ||||||||||||||| |||| ||||||||    
T  38590080 tatatataagaagcatttgacttttttgattcatttcataaataatgtatttggtctatattctataccagatacatcaattactcaatgaatctaaaaa 38590179  T
Q  131 gttaa--ttttttcttataaataggaccg 157  Q
    |||||  ||||||||||||||||| ||||    
T  38590180 gttaattttttttcttataaatagaaccg 38590208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 38040294 - 38040416
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| || |||||||||||||||||| |  | |||||||||||| || |||| |||||||||| |    
T  38040294 tataagaaacatttgacttttttgattcattgcataaatgatatatttgatctatattctagacaagatacatcaattaatcaatgaatctaaaaagtca 38040393  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  38040394 aatttttcttataaataggaccg 38040416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 38737949 - 38738071
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||  ||||||||| | ||||||||| |  | ||||||||||||||| |||| ||||||||||||    
T  38737949 tataagaaacatttgacttttttgattcattgcataaaggatgtatttggtttatattctagacaagatacatcaattactcaatgaatctaaaaagtta 38738048  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  38738049 aatttttcttataaataggaccg 38738071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 50155333 - 50155438
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||||||||||| ||||||| ||||||||| |||||||| || | |||||||||||||||||| |||| |||||||||| || |||||||||||||||    
T  50155333 ttttttaattcattgcataaatgatgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaata 50155432  T
Q  152 ggaccg 157  Q
    ||||||    
T  50155433 ggaccg 50155438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 8971358 - 8971242
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||||||| ||||||||| || |||||||||||||||||  ||||||||| |||||||| |||| ||||| || |||    
T  8971358 tataagaaatatttgacttttttgattcattgcataaataacgtgtttgatctatattctatgtcaaatacattaattactcaatgaatctaacaactta 8971259  T
Q  135 attttttcttataaata 151  Q
    |||||||||||||||||    
T  8971258 attttttcttataaata 8971242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 26070954 - 26070832
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||| |  | ||||||||||||||| |||| |||||||||| |    
T  26070954 tataagaaacattttacttttttgattcattgcataaataatgtatttggtctatattctagataagatacatcaattactcaatgaatctaaaaagtca 26070855  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||  |||||||||| |||||    
T  26070854 aatttcacttataaataagaccg 26070832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 26760191 - 26760313
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| |||||||  |||||| ||||||||| ||||||||||||| ||| ||||| ||| |||| |||| | |||||| | |    
T  26760191 tataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaaatca 26760290  T
Q  135 attttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||    
T  26760291 attttttcttataaataggaccg 26760313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 26924343 - 26924221
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| |||||||  |||||| ||||||||| ||||||||||||| ||| ||||| ||| |||| |||| | |||||||| |    
T  26924343 tataagaaacatttgacttttttgattcattgaataaatgatgtatttggtctatattctataccaagtacattaatgactcaatgaatttaaaaagtca 26924244  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  26924243 actttttcttataaataggaccg 26924221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 519851 - 519970
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| |||||||| |||||||| ||| |||  |||||| ||||||||||||||||||||| |  | ||||||||||||||| |||| ||||||||||||    
T  519851 tataataaacatttgacttttttgatttattgtataaatgatgtatttgatctatattctagataagatacatcaattactcaatgaatctaaaaagtta 519950  T
Q  135 attttttcttataaatagga 154  Q
    |  |||||||||||||||||    
T  519951 aaattttcttataaatagga 519970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 34146823 - 34146941
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||||||||||||| ||||||| || |||| ||||||||||| ||||||||| | ||||||||| ||||| || |||| || ||||| | |    
T  34146823 tataagaaacatttaacttttttgattcattaca-aaatgatgtatttgatatatattctagatcaaatacattaattattcaatgaatcaaaaaaatca 34146921  T
Q  135 attttttcttataaatagga 154  Q
    ||||||||||||||||||||    
T  34146922 attttttcttataaatagga 34146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 49944960 - 49944841
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    ||||||||||| | |||||| |||||||  |||||| ||||||||| ||||||||||| |  | |||||||||||| || |||| ||||||||||||| |    
T  49944960 aagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatgaatctaaaaagttaaat 49944861  T
Q  138 ttttcttataaataggaccg 157  Q
    ||||||||||||||||||||    
T  49944860 ttttcttataaataggaccg 49944841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 37515108 - 37515230
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||||||||||||||||| ||| ||| |||||||||||||||| ||| |||||| | |  | |||||| |||||||  |||| ||||||||||||    
T  37515108 tataaaaaacatttaactttttttatttattgcataaataatgtatttaatccatattccagacaacatacattaattacttaatgaatctaaaaagtta 37515207  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  37515208 aatttttcttataaataggaccg 37515230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 147
Target Start/End: Complemental strand, 34332606 - 34332494
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| |||||||  |||||| ||||||||| ||||||||||| |  ||||||||||||||||| |||| |||||||||| |    
T  34332606 tataagaaacatttgacttttttgattcattggataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtca 34332507  T
Q  135 attttttcttata 147  Q
    |  ||||||||||    
T  34332506 aagttttcttata 34332494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 44939084 - 44939200
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| |||||||  |||||| ||||||||| ||||||||||| |  | ||||||||||||||| |||| |||||||| | |    
T  44939084 tataagaaacatttgactttttttattcattgtataaatgatgtatttggtctatattctagattagatacatcaattactcaatgaatctaaaaaatca 44939183  T
Q  135 attttttcttataaata 151  Q
    ||||| |||||||||||    
T  44939184 attttctcttataaata 44939200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 29 - 113
Target Start/End: Original strand, 15286021 - 15286105
Alignment:
Q  29 tatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatta 113  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||| ||||||||||||||||||||||| ||| ||||| |||||    
T  15286021 tatatttataagaaacatttgacttttttaattcattatataaatgatgtatttgatctatattctataccaagtacattaatta 15286105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 29256619 - 29256738
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||||   |||||| ||||||| ||||||| ||||||||| ||| |||| |||| |||| |||| |||||||| |||| |||||||||| |    
T  29256619 tataagaaacatttt--ttttttgattcattgcataaatgatgtatttggtct-tattttataccaaaaacattaattactcaatgaatctaaaaagtca 29256715  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  29256716 actttttcttataaataggaccg 29256738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 640651 - 640536
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||| ||||||||||| |||||| |||||||  |||||| ||||||||  |||||||| || |  | ||||||||||||||| |||| |||||||||| |    
T  640651 tatatgaaacatttaatttttttcattcattgtataaattatgtatttagtctatattttagataagatacatcaattactc-atgaatctaaaaagtca 640553  T
Q  135 attttttcttataaata 151  Q
    |||||||||||||||||    
T  640552 attttttcttataaata 640536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 6793721 - 6793602
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||||| ||||| | ||||  || ||||| ||||| || |||| | |||||| |||| |    
T  6793721 aagaaacatttaacttttatgattcattgcataaatgatgtatttgacctataatatatactaagtacattaattattcaatgaatttaaaaaattaact 6793622  T
Q  138 ttttcttataaataggaccg 157  Q
    |||||||||||||| |||||    
T  6793621 ttttcttataaataagaccg 6793602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 148
Target Start/End: Complemental strand, 18744682 - 18744576
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    |||||||||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||| | ||||||   |||||| || |||| |||||||||| || |    
T  18744682 aagaaacatttaactttttttattcattgcataaatgatgta-ttggtctatattctagatcaaata---caattattcaatgaatctaaaaagtcaact 18744587  T
Q  138 ttttcttataa 148  Q
    |||||||||||    
T  18744586 ttttcttataa 18744576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 153
Target Start/End: Complemental strand, 23923680 - 23923562
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| | || |||||| | ||||||| ||||||| ||| ||||| ||||||||||| |  | |||||| |||||||| |||| |||||||| | |    
T  23923680 tataagaaaaaatttacttttctgattcattgcataaatgatgcatttggtctatattctagacaatatacattaattactcaatgaatctaaaaattca 23923581  T
Q  135 attttttcttataaatagg 153  Q
    | |||||||||||||||||    
T  23923580 aatttttcttataaatagg 23923562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 37 - 130
Target Start/End: Complemental strand, 6661642 - 6661549
Alignment:
Q  37 taagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||||| |||||||| ||| ||| ||||||| ||||||||| |||||||||||||  | |||||| |||||||  |||| ||||||||    
T  6661642 taagaaacatttgacttttttgattaattgcataaatgatgtatttggtctatattctatacaagatacattaattactaaatgaatctaaaaa 6661549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 5891744 - 5891839
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||| ||||||||||||||||| ||| |||| |||||||||||| | ||||||| ||| |||||| || ||||| || |||| | ||||||    
T  5891744 tataagaaatatttaacttttttaattaattgcatatataatgtatttggtttatattcaataccaaatatattaattaatcaatgaatataaaaa 5891839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 149
Target Start/End: Complemental strand, 11386284 - 11386170
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtct-aaaaagtt 133  Q
    |||||||||||||| ||||||| | |||||| ||||||| ||||||||  ||||||||||| | || | |||||||||| || |||| ||| ||||| |     
T  11386284 tataagaaacatttgactttttga-ttcattgcataaatgatgtatttcgtctatattctagaccagaaacatcaattattcaatgaatctaaaaaaatc 11386186  T
Q  134 aattttttcttataaa 149  Q
    ||||||||||||||||    
T  11386185 aattttttcttataaa 11386170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 145
Target Start/End: Complemental strand, 15343067 - 15342957
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| | |||||| ||||||| ||||||| ||||||||| ||||||||||| |  | |||||| |||||| | |||| |||||||| | |    
T  15343067 tataagaaatatttgatttttttgattcattgcataaatgatgtatttggtctatattctagacaagatacattaattacacaatgaatctaaaaattca 15342968  T
Q  135 attttttctta 145  Q
    | |||||||||    
T  15342967 actttttctta 15342957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 43929360 - 43929485
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  43929360 tatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattgaatgaatctaaaaa 43929458  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  43929459 gttaactttttcttataaataggaccg 43929485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 47678270 - 47678395
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||||||||| |||||    |  ||||||||||| |  |||| ||| ||||    
T  47678270 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaa 47678368  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  47678369 gttaaatttttcttataaataggaccg 47678395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 155
Target Start/End: Original strand, 7375529 - 7375607
Alignment:
Q  77 gtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggac 155  Q
    ||||||| | ||||||||| |  | |||||| |||||| | |||| |||||||||| ||||||||||||||||||||||    
T  7375529 gtatttggtttatattctagacaagatacattaattacacaatgaatctaaaaagtcaattttttcttataaataggac 7375607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 47844667 - 47844542
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | || |||||||||||| |||||    |  ||||||||||| |  |||| ||| ||||    
T  47844667 tatatataagaaacaatttacttttttgattcattgaatagttgatatatttgatctat-ttctaggttaggtacatcaattattgaatgaatctcaaaa 47844569  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  47844568 gttaaatttttcttataaataggaccg 47844542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 24305683 - 24305804
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| | |||||| ||||||  ||||||| ||||||  | | |||||||||||  | ||||||||||||||| || | | |||||| |||    
T  24305683 tataaaaaatatttgattttttttattcatcgcataaatgatgtataaggtttatattctatacaagatacatcaattactcaataaatttaaaaaatta 24305782  T
Q  135 attttttcttataaataggacc 156  Q
    | |||||||| |||||||||||    
T  24305783 aatttttcttctaaataggacc 24305804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 27819329 - 27819446
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgt-atttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtt 133  Q
    ||||| ||| |||| |||||||| ||||||| ||||||| || | ||||||| |||||| || |  ||||||| ||| || || |||| |||||||||||    
T  27819329 tataaaaaatatttgacttttttgattcatttcataaatgatattatttgatttatattttagacaaaatacaccaaatattcaatgaatctaaaaagtt 27819428  T
Q  134 aattttttcttataaata 151  Q
    || |||||||| ||||||    
T  27819429 aaatttttcttgtaaata 27819446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 39748637 - 39748684
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtattt 82  Q
    ||||||||| |||| |||||||||||||||| ||||||| ||||||||    
T  39748637 tataagaaatatttgacttttttaattcattgcataaatgatgtattt 39748684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 47912835 - 47912890
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctata 90  Q
    ||||||||| |||| |||||||| ||| |||  |||||||||||||||||||||||    
T  47912835 tataagaaatatttgacttttttgatttattgtataaataatgtatttgatctata 47912890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Original strand, 2351151 - 2351189
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaat 73  Q
    ||||||||||||||||||||||| ||||||| |||||||    
T  2351151 tataagaaacatttaacttttttgattcattgcataaat 2351189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 9387259 - 9387320
Alignment:
Q  53 tttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactc 116  Q
    ||||| ||||||| ||||||| |||||||||||||||||  |||| |||||| || ||||||||    
T  9387259 ttttttattcattacataaatgatgtatttgatctatat--tataccaaatagattaattactc 9387320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 1e-35; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 155
Target Start/End: Complemental strand, 30192026 - 30191906
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||| ||||||||||| |  ||||||||||||||||| |||| |||||||| | |    
T  30192026 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaaatca 30191927  T
Q  135 attttttcttataaataggac 155  Q
    |||||||||||||||||||||    
T  30191926 attttttcttataaataggac 30191906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 48361182 - 48361060
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| ||||||||||| |  ||||||||||||||||| |||| |||||||||| |    
T  48361182 tataagaaacatttgacttttttgattcattgcataaatgatgtatttggtctatattctagacaaaatacatcaattactcaatgaatctaaaaagtca 48361083  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  48361082 aatttttcttataaataggaccg 48361060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 53225669 - 53225784
Alignment:
Q  42 aacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatttttt 141  Q
    ||||||| |||||||| ||||||| ||||||| ||||||||| |||| |||||||| ||||||||| ||||| || |||| |||||||||| ||||||||    
T  53225669 aacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaaatacattaattattcaatgaatctaaaaagtcaatttttt 53225768  T
Q  142 cttataaataggaccg 157  Q
    ||||||||||||||||    
T  53225769 cttataaataggaccg 53225784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 13 - 156
Target Start/End: Complemental strand, 48196040 - 48195899
Alignment:
Q  13 atacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatt 112  Q
    |||||||||||||| |||| ||||  |||||||||| ||||||||  |||||| ||||||| ||||||||| ||||||||||| |  | |||| ||||||    
T  48196040 atacttcctccggtcctatttata--agaaacatttgacttttttggttcattgcataaatgatgtatttggtctatattctagacaagatacgtcaatt 48195943  T
Q  113 actctatgagtctaaaaagttaattttttcttataaataggacc 156  Q
    |||| |||| | |||||||||| |||||||||||||||||||||    
T  48195942 actcaatgaatttaaaaagttagttttttcttataaataggacc 48195899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 16412368 - 16412242
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||| |||| |||| ||| |  |||| ||||||||||||||||| ||||||||||| | |||||| |||||||| || |||| ||||||||    
T  16412368 tatatataagaaatatttgacttctttgacacattgcataaataatgtatttggtctatattctagaccaaatatatcaattattcaatgaatctaaaaa 16412269  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    || ||||||||||||||||||| ||||    
T  16412268 gtcaattttttcttataaatagaaccg 16412242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 44111763 - 44111885
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||| ||| ||||||| ||||||||| ||||||||||| |  | ||||||||||||||| |||| |||||||||| |    
T  44111763 tataagaaacatttgacttttttgattaattacataaatgatgtatttggtctatattctaaagaagatacatcaattactcaatgaatctaaaaagtca 44111862  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  44111863 actttttcttataaataagaccg 44111885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 13 - 154
Target Start/End: Complemental strand, 8347795 - 8347656
Alignment:
Q  13 atacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatt 112  Q
    |||||||||||||| ||| || |||||||||||||| |||||||| |||||||  |||||| ||||||| | |||||||| ||||  ||||||||||||     
T  8347795 atacttcctccggt-cta-atttataagaaacatttgactttttttattcattgtataaatgatgtattcggtctatattttatacaaaatacatcaatc 8347698  T
Q  113 actctatgagtctaaaaagttaattttttcttataaatagga 154  Q
    |||| |||| |||||||||| || ||||||||||||||||||    
T  8347697 actcaatgaatctaaaaagtcaaatttttcttataaatagga 8347656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 35 - 151
Target Start/End: Original strand, 25477563 - 25477679
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| |||||||| ||||||| ||||||| ||||||||||||||||||||| |  ||||||||||||||||| |||| | |||||||| |    
T  25477563 tataaaaaatatttgacttttttgattcattgcataaatgatgtatttgatctatattctacacaaaatacatcaattactcaatgaatttaaaaagtca 25477662  T
Q  135 attttttcttataaata 151  Q
    |  ||||||||||||||    
T  25477663 aaattttcttataaata 25477679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 21554127 - 21554245
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| |||||||  ||||||| ||||||| ||||||||| ||||||||||||| | ||||||| |||||||| |||| |||||||| | |    
T  21554127 tataaaaaatatttgactttttcgattcattgcataaatgatgtatttggtctatattctatatc-aatacattaattactcaatgaatctaaaaaatca 21554225  T
Q  135 attttttcttataaatagga 154  Q
    | ||||||||||||||||||    
T  21554226 actttttcttataaatagga 21554245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 157
Target Start/End: Complemental strand, 41116696 - 41116570
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||| |||||||||| ||| | |||||| ||| |||  ||||||| |||||||| |||||||| || |  | ||||||||||||||| |||| |||||||    
T  41116696 atatttataagaaacttttcattttttttatttattgtataaata-tgtatttggtctatattttagataagatacatcaattactcaatgaatctaaaa 41116598  T
Q  130 agttaattttttcttataaataggaccg 157  Q
    |||||| |||||||||||||||||||||    
T  41116597 agttaaatttttcttataaataggaccg 41116570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 42670894 - 42670775
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||  ||||||| ||||||| || |||||| ||||||||||| |  | |||||| |||||| | |||| || |||||||||    
T  42670894 tataagaaacatttgactttttagattcattgcataaatgatatatttggtctatattctaaacgagatacattaattacacaatgaatcaaaaaagtta 42670795  T
Q  135 attttttcttataaatagga 154  Q
    | ||||||||||||||||||    
T  42670794 actttttcttataaatagga 42670775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 42 - 157
Target Start/End: Complemental strand, 47943850 - 47943735
Alignment:
Q  42 aacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatttttt 141  Q
    ||||||| || ||||| ||||||| ||||||| ||||||||  |||||||| |||| ||| ||||| |||||||| || | |||||||||| ||||||||    
T  47943850 aacatttgacatttttgattcattgcataaatgatgtatttagtctatattttataccaagtacattaattactcaattaatctaaaaagtcaatttttt 47943751  T
Q  142 cttataaataggaccg 157  Q
    | ||||||||||||||    
T  47943750 catataaataggaccg 47943735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 45828433 - 45828555
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| | |||||| |||| || ||||||| ||||||||| | |||||| || | ||||||||| |||||||| |||| |||||||| | |    
T  45828433 tataaaaaatatttgatttttttgattctttacataaatgatgtatttggtttatattatagaccaaatacattaattactcaatgaatctaaaaaatca 45828532  T
Q  135 attttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||    
T  45828533 attttttcttataaataggaccg 45828555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 50121567 - 50121445
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||||||||||| ||||||| || |||||| ||||||| ||| |  | |||||||||| | || || | |||||||||| |    
T  50121567 tataagaaacatttgacttttttaattcattgcataaatgatatatttggtctatatactagacaagatacatcaatcattcaataaatctaaaaagtca 50121468  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  50121467 aatttttcttataaataagaccg 50121445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 43 - 156
Target Start/End: Original strand, 42169069 - 42169182
Alignment:
Q  43 acatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttc 142  Q
    |||||| |||||||| ||||||| ||||||| ||||||||| || |||||| | |  |||||||||||||| || || | |||||||||| || ||||||    
T  42169069 acatttgacttttttgattcattacataaatgatgtatttggtccatattcaagacaaaatacatcaattattcaataaatctaaaaagtcaaatttttc 42169168  T
Q  143 ttataaataggacc 156  Q
    ||||||||||||||    
T  42169169 ttataaataggacc 42169182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 43117889 - 43117994
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||| ||| ||| ||||||| ||||||||| |||||||| |||| ||||||||||||||| || |||| | |||||| | ||||||||||||||||||    
T  43117889 ttttttgatttattgcataaatgatgtatttggtctatattttataccaaatacatcaattattcaatgaatgtaaaaaatcaattttttcttataaata 43117988  T
Q  152 ggaccg 157  Q
    | ||||    
T  43117989 gaaccg 43117994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 4386266 - 4386150
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||||||| ||||||| ||||||||  |||||||| || |  ||||||||||||||||  |||| | |||||||| |    
T  4386266 tataagaaaaatttgacttttttgattcattacataaatgatgtatttagtctatattgtagataaaatacatcaattacttaatgaatttaaaaagtca 4386167  T
Q  135 attttttcttataaata 151  Q
    | |||||||||||||||    
T  4386166 aatttttcttataaata 4386150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 157
Target Start/End: Original strand, 53658377 - 53658504
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||| ||||||||| ||||||||||||| |||||||  || ||||||||||||| ||||||||||| |  |||||||| | |||  | || | |||||||    
T  53658377 atatttataagaaatatttaactttttttattcattgtatgaataatgtatttggtctatattctagacaaaatacattagttatacaataaatctaaaa 53658476  T
Q  130 agttaattttttcttataaataggaccg 157  Q
    | |||| |||||||||||||||| ||||    
T  53658477 aattaactttttcttataaatagaaccg 53658504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 3163025 - 3162903
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| |||||||| |||||||| ||||||| ||||||| |||||||   ||||||||||| |  | ||| || |||||| | |||| | |||||||| |    
T  3163025 tataaaaaacatttgacttttttgattcattgcataaatgatgtattgagtctatattctagacaagatatattaattacacaatgaatttaaaaagtca 3162926  T
Q  135 attttttcttataaataggaccg 157  Q
    ||||||||||||||||| |||||    
T  3162925 attttttcttataaataagaccg 3162903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 36132653 - 36132775
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| |||||||  |||||| ||||||||  ||||||||| | |  | ||||||||| ||||| |||  ||| |||||| |    
T  36132653 tataagaaatatttgacttttttgattcattgtataaatgatgtatttagtctatattcaagacaagatacatcaactactcaatgtatcttaaaagtca 36132752  T
Q  135 attttttcttataaataggaccg 157  Q
    ||||||||||||||||| |||||    
T  36132753 attttttcttataaataagaccg 36132775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Complemental strand, 19150853 - 19150772
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactc 116  Q
    |||||||||||||| |||||||  ||||||| ||||||| ||||||||| ||||||||||||| |||  |||| ||||||||    
T  19150853 tataagaaacattttactttttcgattcattgcataaatgatgtatttggtctatattctataccaagcacattaattactc 19150772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Original strand, 32714287 - 32714363
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaat 111  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||  ||||||||||| |  ||||||||||||    
T  32714287 tataagaaacatttgacttttttgattcattacataaatgatgtatttagtctatattctagacaaaatacatcaat 32714363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 157
Target Start/End: Complemental strand, 42804407 - 42804264
Alignment:
Q  11 ttatacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaa 110  Q
    ||||||| |||||||| |||||||||  ||||||| || | |||||| |||||||  |||  | ||||||||| ||||| ||||| |  |  ||||||||    
T  42804407 ttatactccctccggtcctatatata--agaaacaatttatttttttgattcattaaatagttgatgtatttggtctat-ttctaaattaggtacatcaa 42804311  T
Q  111 ttactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    ||| |  |||| ||||||||||||| |||||||||||||||||||||    
T  42804310 ttattgaatgaatctaaaaagttaactttttcttataaataggaccg 42804264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 20459255 - 20459380
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  20459255 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 20459353  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  20459354 gttaactttttcttataaataggaccg 20459380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 43020889 - 43020764
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  43020889 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatgaatctaaaaa 43020791  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  43020790 gttaactttttcttataaataggaccg 43020764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 47866169 - 47866044
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  47866169 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 47866071  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  47866070 gttaactttttcttataaataggaccg 47866044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 44061401 - 44061466
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    |||| |||||||||| ||| | |||||| ||||||| ||||||||||||||||| |||||||||||    
T  44061401 atatttataagaaacgtttgagttttttgattcattgcataaataatgtatttggtctatattcta 44061466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 69 - 157
Target Start/End: Complemental strand, 9894721 - 9894633
Alignment:
Q  69 taaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    ||||| ||||||||||||||||||||| |  | |||||| ||| ||   |||| |||||||||| || |||||||||||||||||||||    
T  9894721 taaatgatgtatttgatctatattctagacaagatacattaataacataatgaatctaaaaagtcaactttttcttataaataggaccg 9894633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 20745346 - 20745471
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||| ||||| || |||||||| |||||||  |||  | ||||||||||||||| |||||    |  ||||||||||| |  |||| ||||||||    
T  20745346 tatatataaaaaacaatttacttttttgattcattgaatagttgatgtatttgatctat-ttctaggctaggtacatcaattattgaatgaatctaaaaa 20745444  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     |||| |||||||||||||||||||||    
T  20745445 attaactttttcttataaataggaccg 20745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 35429791 - 35429872
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactc 116  Q
    ||||||||| |||| |||||||| |||| || ||||||  ||||||||| ||||||||||| |  | |||||||||||||||    
T  35429791 tataagaaatatttgactttttttattcgttgcataaaagatgtatttggtctatattctagacaagatacatcaattactc 35429872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 50685469 - 50685530
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatat 91  Q
    |||| |||| ||||||||| |||||||| ||| ||||||||||| ||||||||| |||||||    
T  50685469 atatttatacgaaacatttgactttttttattaattccataaatgatgtatttggtctatat 50685530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 9044406 - 9044486
Alignment:
Q  36 ataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactc 116  Q
    |||||||| |||| |||||||| |||||||  |||||| |||| ||||  |||||||||| |  |||||||||||||||||    
T  9044406 ataagaaatatttgacttttttgattcattgtataaatgatgtctttggcctatattctagacaaaatacatcaattactc 9044486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 31977762 - 31977885
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacat--caattactctatgagtctaaaaagt 132  Q
    ||||||||| |||| | |||||| |||| |  ||||||| || |||||| ||||||||||| | |  ||||||  ||||||||| |||| |||||||||     
T  31977762 tataagaaatatttgattttttttattcctagcataaatgatatatttggtctatattctaaaccctatacatatcaattactcaatgaatctaaaaagc 31977861  T
Q  133 taattttttcttataaataggacc 156  Q
      ||||||||||||||||| ||||    
T  31977862 cgattttttcttataaatatgacc 31977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 19150720 - 19150665
Alignment:
Q  103 tacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccgt 158  Q
    ||||| |||||||| || | |||||||||| || ||||||||||||||||||||||    
T  19150720 tacattaattactcaataaatctaaaaagtcaactttttcttataaataggaccgt 19150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 33010804 - 33010685
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||  ||||| |||||| |||  ||  |||||| |||||||| || ||||||||| |  ||||| || |||||| | || | |||||||| | |    
T  33010804 tataagaaatgtttaatttttttgattttttttataaatgatgtatttaatatatattctaaacaaaatatattaattacacaattaatctaaaaaatca 33010705  T
Q  135 attttttcttataaatagga 154  Q
    ||||||||||||||||||||    
T  33010704 attttttcttataaatagga 33010685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 2643722 - 2643616
Alignment:
Q  52 ttttttaa-ttcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaat 150  Q
    |||||||| ||||||  |||||||| ||||||| | |||||| || |  || ||||| ||||| || ||||  ||||||||| |||| ||||||||||||    
T  2643722 ttttttaagttcattaaataaataaagtatttggtgtatattttagactaagtacataaattattcaatgaaactaaaaagtcaattatttcttataaat 2643623  T
Q  151 aggaccg 157  Q
    |||||||    
T  2643622 aggaccg 2643616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 157
Target Start/End: Complemental strand, 3043854 - 3043800
Alignment:
Q  103 tacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    ||||||||||| |  |||| |||||||| |||| |||||||||||||||||||||    
T  3043854 tacatcaattattgaatgaatctaaaaaattaactttttcttataaataggaccg 3043800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 148
Target Start/End: Original strand, 43141784 - 43141897
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    ||||||||||| |||||||||||  ||||||  |||| | |||||| | ||||||||| || || || |||||| ||||| |||||||  |||||||||     
T  43141784 tataagaaacaattaacttttttggttcattgtataagtgatgtatctaatctatatt-tacaataagatacattaattattctatgaacctaaaaagtc 43141882  T
Q  134 aattttttcttataa 148  Q
    || ||||||||||||    
T  43141883 aactttttcttataa 43141897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Original strand, 37895338 - 37895395
Alignment:
Q  100 aaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||| ||||| ||||||| |||||||||| || ||||||||||||  |||||||    
T  37895338 aaatacattaattattctatgaatctaaaaagtcaactttttcttataataaggaccg 37895395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 52136764 - 52136707
Alignment:
Q  100 aaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||||| |||| | ||||  |||||||||||||||||||||||||  |||||||    
T  52136764 aaatacatcacttacacaatgaacctaaaaagttaattttttcttataataaggaccg 52136707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 8826774 - 8826830
Alignment:
Q  101 aatacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||| |||||||| || |||| |||||||||| ||||||||| || |||||||||||    
T  8826774 aatatatcaattattcaatgaatctaaaaagtaaattttttcatacaaataggaccg 8826830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 24100839 - 24100776
Alignment:
Q  85 tctatattctataacaa-atacatcaattactctatgagtctaaaaagttaattttttcttataa 148  Q
    |||||||| |||||||| |||||| ||||| || |||| ||||||||||||||| ||||||||||    
T  24100839 tctatatt-tataacaagatacattaattattcaatgaatctaaaaagttaattatttcttataa 24100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 130
Target Start/End: Complemental strand, 45096709 - 45096609
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||| ||||| |||||||| |||||||| ||| ||| ||||||| || |||||| |||||| |||| |  | |||||||||||| || || | |||||||    
T  45096709 atatttataaaaaacatttgacttttttgatttattgcataaatgatatatttggtctataatctagacaagatacatcaattattcaataaatctaaaa 45096610  T
Q  130 a 130  Q
    |    
T  45096609 a 45096609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 59 - 91
Target Start/End: Complemental strand, 50685559 - 50685527
Alignment:
Q  59 attcattccataaataatgtatttgatctatat 91  Q
    ||||||||||||||||||||||||||| |||||    
T  50685559 attcattccataaataatgtatttgatttatat 50685527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 2e-34; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 21663016 - 21662894
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||||||||||||| ||||||| ||||||| ||||||||| |||||| |||||| ||| ||||| |||||||| |||| |||||||||| |    
T  21663016 tataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatgaatctaaaaagtca 21662917  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  21662916 actttttcttataaataggaccg 21662894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 37 - 157
Target Start/End: Original strand, 12747717 - 12747837
Alignment:
Q  37 taagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaat 136  Q
    |||||||||||| | |||||| ||||||| |||||||  |||||||| | ||||||||| | |||||||||||||||||| |||| |||||||| | |||    
T  12747717 taagaaacatttgatttttttgattcattgcataaattgtgtatttggtgtatattctagaccaaatacatcaattactcgatgaatctaaaaaatcaat 12747816  T
Q  137 tttttcttataaataggaccg 157  Q
    |||||||||||||||||||||    
T  12747817 tttttcttataaataggaccg 12747837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 51517087 - 51516966
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| ||||||||  |||||| ||||||| ||||||||| ||||||||||||  ||| ||||| |||||||| || | |||||||||| |    
T  51517087 tataagaaacatttgacttttttggttcattgcataaatgatgtatttggtctatattctatgccaagtacattaattactccat-aatctaaaaagtca 51516989  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  51516988 actttttcttataaataggaccg 51516966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 53441925 - 53442047
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| | || |||||||| ||| ||||| ||||| || |||| | |||||||| |    
T  53441925 tataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattcaatgaatttaaaaagtca 53442024  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  53442025 actttttcttataaataggaccg 53442047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 31 - 154
Target Start/End: Complemental strand, 9236221 - 9236097
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||| |||| |||| |||||||| ||||||| ||||||| || |||||  ||||||||||||| || ||||||||||||||| |||| || |||||    
T  9236221 tatatatacgaaatatttgacttttttgattcattacataaatgatatatttagtctatattctatatcagatacatcaattactcaatgaatcaaaaaa 9236122  T
Q  131 gttaa-ttttttcttataaatagga 154  Q
    ||||| ||||||||||||| |||||    
T  9236121 gttaacttttttcttataagtagga 9236097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 12064927 - 12065046
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||| ||| ||||||||| |||||||||||||  ||||| || |||||||  |||| | |||||||| |    
T  12064927 tataagaaacattttacttttttgattcattgcattaatgatgtatttggtctatattctatactaaatatattaattacttaatgaatttaaaaagtca 12065026  T
Q  135 attttttcttataaatagga 154  Q
    ||||||||||||||| ||||    
T  12065027 attttttcttataaaaagga 12065046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 154
Target Start/End: Complemental strand, 51723503 - 51723389
Alignment:
Q  40 gaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatttt 139  Q
    |||| ||||||||||||| |||||||  |||||| || |||||  ||||||||||||| ||||||||| |||||||| |||| |||||||| | || |||    
T  51723503 gaaaaatttaacttttttgattcattgtataaatgatatatttagtctatattctatatcaaatacattaattactcaatgaatctaaaaaatcaacttt 51723404  T
Q  140 ttcttataaatagga 154  Q
    |||||||||||||||    
T  51723403 ttcttataaatagga 51723389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 154
Target Start/End: Complemental strand, 54537558 - 54537454
Alignment:
Q  50 acttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaa 149  Q
    |||||||| ||||||| |||||||  |||||||||||||||||||| |  | ||||||||||||||| |||| ||| |||||| || |||||||||||||    
T  54537558 acttttttgattcattgcataaattgtgtatttgatctatattctagactagatacatcaattactcaatgaatcttaaaagtcaaatttttcttataaa 54537459  T
Q  150 tagga 154  Q
    |||||    
T  54537458 tagga 54537454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 158
Target Start/End: Original strand, 23222976 - 23223098
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||||||| |||  |||||| ||||||||| |||||||| || |  | |||||||| |||||| |||| |||||||| | |    
T  23222976 tataagaaacatttgacttttttaatttattatataaatgatgtatttggtctatattttagacaagatacatcagttactcaatgaatctaaaaa-tca 23223074  T
Q  135 attttttcttataaataggaccgt 158  Q
    ||||||||||||||||| ||||||    
T  23223075 attttttcttataaatatgaccgt 23223098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 30 - 148
Target Start/End: Original strand, 25910204 - 25910322
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||| |||||||||||||| |  ||||| ||||| | |||||| |||||||||| ||||||||||| | ||||||||| |||||||| || | | |||||    
T  25910204 atatttataagaaacatttgagattttttattcactgcataaagaatgtatttggtctatattctacaccaaatacattaattactcaataaatttaaaa 25910303  T
Q  130 agttaattttttcttataa 148  Q
    ||| || ||||||||||||    
T  25910304 agtcaactttttcttataa 25910322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 38 - 156
Target Start/End: Original strand, 19649600 - 19649718
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    ||||||||||| |||||||| |||||||  |||| | ||||||||  |||||||| || | | |||||||||||||||| |||| |||||||| | || |    
T  19649600 aagaaacatttgacttttttgattcattgaataattgatgtatttagtctatattttagaccgaatacatcaattactcaatgaatctaaaaaatcaaat 19649699  T
Q  138 ttttcttataaataggacc 156  Q
     |||||| |||||||||||    
T  19649700 gtttcttgtaaataggacc 19649718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 35099073 - 35099195
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| ||||||||||||||||| |||  |||||| ||||||||| ||||||||||| |  | ||| || |||||| | || | | ||||| || |    
T  35099073 tataagaaatatttaacttttttaatttattgtataaatgatgtatttggtctatattctagacaagatatattaattacacaataaatttaaaaggtca 35099172  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  35099173 actttttcttataaataggaccg 35099195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 45010768 - 45010890
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||| |||  |||||| |||| | || ||||||||||| |  | |||||||||||| || || | |||||||| |||    
T  45010768 tataagaaatatttgacttttttgatttattgtataaatgatgtttgtggtctatattctaaactagatacatcaattattcaataaatctaaaaaatta 45010867  T
Q  135 attttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||    
T  45010868 attttctcttataaataggaccg 45010890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 8266361 - 8266263
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| |||||||  ||||||||||| ||||   |||||| || |  ||||||||||||||||| |||| ||||||||||||    
T  8266361 tataagaaacatttgacttttttgattcattgtataaataatgtgtttg--gtatattttagataaaatacatcaattactcaatgaatctaaaaagtta 8266264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 35 - 152
Target Start/End: Original strand, 20028489 - 20028604
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| ||||||||| |||||| ||||||| ||||||||||||||||||||||  ||| || || ||||| || |||| ||| ||||||||    
T  20028489 tataaaaaatatttgactttttta-ttcatttcataaatgatgtatttgatctatattctatcccaagtatattaattattcaatgaatct-aaaagtta 20028586  T
Q  135 attttttcttataaatag 152  Q
      ||||||||||||||||    
T  20028587 gctttttcttataaatag 20028604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 151
Target Start/End: Complemental strand, 52865066 - 52864965
Alignment:
Q  50 acttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaa 149  Q
    |||||||| ||||||| ||||||| || |||||  |||||||| || |  | ||||||||||||||| |||| ||||||||||||| ||||||| |||||    
T  52865066 acttttttgattcattgcataaatgatatatttagtctatattttagataagatacatcaattactcaatgaatctaaaaagttaaatttttctcataaa 52864967  T
Q  150 ta 151  Q
    ||    
T  52864966 ta 52864965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 36985286 - 36985164
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    |||||||||  ||| |||||||| ||||||| ||||||||||||||||  ||||||||||| ||||| |||||| |||||  | || | ||| |||| ||    
T  36985286 tataagaaatttttgacttttttgattcattgcataaataatgtatttagtctatattcta-aacaagatacattaattatacaataaatcttaaaaatt 36985188  T
Q  134 aattttttcttataaataggaccg 157  Q
    ||  ||||||||||||||||||||    
T  36985187 aacattttcttataaataggaccg 36985164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 37010725 - 37010603
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtt 133  Q
    |||||||||  ||| |||||||| ||||||| ||||||||||||||||  ||||||||||| ||||| |||||| |||||  | || | ||| |||| ||    
T  37010725 tataagaaatttttgacttttttgattcattgcataaataatgtatttagtctatattcta-aacaagatacattaattatacaataaatcttaaaaatt 37010627  T
Q  134 aattttttcttataaataggaccg 157  Q
    ||  ||||||||||||||||||||    
T  37010626 aacattttcttataaataggaccg 37010603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 44518166 - 44518047
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||  ||| |||||||| |||||||   ||||| ||||||||| |||||||| || |  | |||||| |||||||| |||| |||||||||| |    
T  44518166 tataagaaaactttgacttttttgattcattgtctaaatgatgtatttggtctatattttagacaagatacattaattactcaatgaatctaaaaagtca 44518067  T
Q  135 attttttcttataaatagga 154  Q
    |  |||||||||||||||||    
T  44518066 aagttttcttataaatagga 44518047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 53357313 - 53357431
Alignment:
Q  41 aaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattact-ctatgagtctaaaaagttaatttt 139  Q
    ||||||||| ||||||||||| ||| ||||||| || |||||| ||||||||||| |  | ||| |||||||||| | || | |||||||||| ||| ||    
T  53357313 aaacattta-cttttttaatttattgcataaatgatatatttggtctatattctagacaagatagatcaattactccaataaatctaaaaagtcaatgtt 53357411  T
Q  140 ttcttataaataggaccgtt 159  Q
    |||||| |||||||||||||    
T  53357412 ttcttacaaataggaccgtt 53357431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 5177851 - 5177905
Alignment:
Q  103 tacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    ||||||||||| |  |||| |||||||||||||||||||||||||||||||||||    
T  5177851 tacatcaattattgaatgaatctaaaaagttaattttttcttataaataggaccg 5177905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 152
Target Start/End: Complemental strand, 49885512 - 49885392
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| ||| | |  |||| | ||||||||| ||||| ||||| |  | |||||||||||| |  |||| ||||||||    
T  49885512 tatatataagaaacaatttacttttttgattaagtggataattgatgtatttggtctat-ttctagactagatacatcaattattgaatgaatctaaaaa 49885414  T
Q  131 gttaattttttcttataaatag 152  Q
     |||||||||||||||||||||    
T  49885413 attaattttttcttataaatag 49885392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 25954040 - 25954135
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||||||  ||| ||||||||||||||||  |||||| || |||||||||||||||||| |  | |||||| |||||||| |||| | ||||||    
T  25954040 tataagaaatgtttgacttttttaattcattatataaatgatatatttgatctatattctagacaagatacattaattactcaatgaatttaaaaa 25954135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 157
Target Start/End: Complemental strand, 40460443 - 40460353
Alignment:
Q  68 ataaataatgtatttgatctatattctataacaa-atacatc-aattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||| ||||||||| |||||||| || ||||| ||||||  |||||| | |||| ||||||||||||||||||||||||||||| |||||    
T  40460443 ataaatgatgtatttggtctatatttta-aacaagatacatttaattacacaatgaatctaaaaagttaattttttcttataaataagaccg 40460353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 33808328 - 33808449
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||| ||| |||| | |||||| ||| ||| |||||||||| || ||| || ||||||||   ||||||||||||||| || || | | |||||||| |    
T  33808328 tataaaaaatatttgattttttttatttattgcataaataatatacttggtcaatattctaatccaaatacatcaattattcaattaatttaaaaagtca 33808427  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  33808428 a-tttttcttataaataggaccg 33808449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 35 - 92
Target Start/End: Original strand, 13622505 - 13622562
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatatt 92  Q
    |||||||||||||| ||||||||| |||||| ||||||| || |||||| ||||||||    
T  13622505 tataagaaacatttgacttttttagttcattgcataaatgatatatttggtctatatt 13622562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 9197099 - 9197159
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    ||||||||| |||| |||||||| ||||||| ||||||| ||||||||  |||||||||||    
T  9197099 tataagaaatatttgacttttttgattcattgcataaatgatgtattttgtctatattcta 9197159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 38 - 157
Target Start/End: Original strand, 28406488 - 28406607
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatt 137  Q
    |||||||| || |||||||  |||| ||  |||| ||||||||||| ||||||||||| | |   ||||| ||||| || ||||  ||||||||| ||||    
T  28406488 aagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattcaatgaacctaaaaagtcaatt 28406587  T
Q  138 ttttcttataaataggaccg 157  Q
     |||||| ||||||||||||    
T  28406588 gtttcttgtaaataggaccg 28406607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 43449088 - 43448969
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| | ||||||  ||||||  |||||| ||||||||| | |||||  || |  | ||| ||||||||||| |||| |||||||| | |    
T  43449088 tataagaaatatttgatttttttggttcattgtataaatgatgtatttggtttatatcatagacaagatatatcaattactcaatgaatctaaaaaatca 43448989  T
Q  135 attttttcttataaatagga 154  Q
    | ||||||||||||||||||    
T  43448988 actttttcttataaatagga 43448969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 53442037 - 53441915
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| | || ||||||| ||||||||  |||| ||||||| ||| | || | | |||| ||||||||||| |||  | |||| || ||||||| |    
T  53442037 tataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatgaatcaaaaaagtaa 53441938  T
Q  135 attttttcttataaataggaccg 157  Q
    | | |||||||||||||||||||    
T  53441937 aatgtttcttataaataggaccg 53441915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 134
Target Start/End: Complemental strand, 2544586 - 2544489
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaa-atacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||| || |||||||  |||||||  |||| | ||||||||| |||||| | |||||||| |||||||||||| || ||||  |||||||||||    
T  2544586 aagaaacaattgactttttagattcattgtataagtgatgtatttggtctataatttataacaagatacatcaattattcaatgaacctaaaaagtta 2544489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 48593276 - 48593151
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||| ||||||||  ||| |||||  |||||||  |||| | ||||||||| ||||||||||| | |  |||||||||||| || |||  ||||||||    
T  48593276 tatatacaagaaacaagtaattttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattcaatgtatctaaaaa 48593177  T
Q  131 gttaattttttcttataaataggacc 156  Q
    || | || ||||||||  ||||||||    
T  48593176 gtcacttgtttcttatgtataggacc 48593151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 53 - 149
Target Start/End: Complemental strand, 29290890 - 29290794
Alignment:
Q  53 tttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaa 149  Q
    |||||||||||||  |||| | ||||||||  |||||| | || | || |||||||| ||  || |||| |||||||||| ||||||||||||||||    
T  29290890 tttttaattcattgaataacttatgtatttagtctataatatagatcagatacatcagttgttcaatgaatctaaaaagtgaattttttcttataaa 29290794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 157
Target Start/End: Complemental strand, 50354323 - 50354276
Alignment:
Q  109 aattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||||| |||| ||||||  |||||||||||||||||||||||||||    
T  50354323 aattactcaatgaatctaaat-gttaattttttcttataaataggaccg 50354276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 38394558 - 38394439
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| |||| |||||||| ||| ||||| ||||| || |||| |||||||||| |    
T  38394558 tataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctaaaaagtca 38394459  T
Q  135 attttttcttataaatagga 154  Q
    ||||||||||||||||||||    
T  38394458 attttttcttataaatagga 38394439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 21488301 - 21488420
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||||||||||| ||||||||||||||||| ||||||||||| |  |||||||| ||||||   |||||| |||||| |||    
T  21488301 tataagaaatatttgacttttttaattcattgcataaataatgtatttggtctatattctagacaaaatacattaattacataatgagtttaaaaaatta 21488400  T
Q  135 attttttcttataaatagga 154  Q
    | ||||||||||||||||||    
T  21488401 actttttcttataaatagga 21488420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 13789750 - 13789872
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| ||||||||| |||| |||||||| ||| ||||| ||||| || |||| ||| |||||| |    
T  13789750 tataagaaacattttacttttttgattcattgcataaatgatgtatttggtctacattctataccaagtacattaattattcaatgaatctgaaaagtca 13789849  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||| ||||    
T  13789850 actttttcttataaatagaaccg 13789872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 5002158 - 5002277
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||| ||| ||||||| |||||||||||||||||| || |  | ||||||||||||||| || | |||||||||| |    
T  5002158 tataagaaacatttgacttttttgattaattgcataaatgatgtatttgatctatattttagacaagatacatcaattactcaataaatctaaaaagtaa 5002257  T
Q  135 attttttcttataaatagga 154  Q
    |  |||||||||||||||||    
T  5002258 aaattttcttataaatagga 5002277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 35 - 154
Target Start/End: Complemental strand, 18473605 - 18473486
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| |||||||  |||||| ||| ||||||||||||||||| |  | ||||||||||||||| |||| |||||||||| |    
T  18473605 tataagaaacatttgacttttttgattcattgtataaatgatgcatttgatctatattctagacaagatacatcaattactcaatgaatctaaaaagtca 18473506  T
Q  135 attttttcttataaatagga 154  Q
    | ||| ||| ||||||||||    
T  18473505 aatttctctcataaatagga 18473486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 30 - 129
Target Start/End: Original strand, 919655 - 919754
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    ||||||||| |||| |||| |||||||| |||||||| |||||| ||||||||| |||||||||||||  | ||||||||||||||| |||| |||||||    
T  919655 atatatataggaaatatttgacttttttgattcattcaataaatgatgtatttggtctatattctatactagatacatcaattactcaatgaatctaaaa 919754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 29299488 - 29299365
Alignment:
Q  35 tataagaaacatttaactttttt-aattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtt 133  Q
    |||||||||||||| |||||||| ||||||||  |||||| ||||||| | |||||||| || |  |||||||||||| |||| |||| |||||||| |     
T  29299488 tataagaaacatttgacttttttgaattcattgtataaatgatgtattcggtctatattttagacaaaatacatcaatcactcaatgaatctaaaaaatc 29299389  T
Q  134 aattttttcttataaataggaccg 157  Q
    || |||||||||||||||||||||    
T  29299388 aaatttttcttataaataggaccg 29299365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 156
Target Start/End: Complemental strand, 33478237 - 33478114
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| || ||||| ||||||| ||||||| |||||||||  |||||||||| |  | ||||||||||||||| |||| |||||||| | |    
T  33478237 tataagaaacatttgacatttttgattcattgcataaatgatgtatttggcctatattctagacgagatacatcaattactcaatgaatctaaaaattca 33478138  T
Q  135 a--ttttttcttataaataggacc 156  Q
    |  |||||||||||||| ||||||    
T  33478137 aatttttttcttataaaaaggacc 33478114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 52 - 149
Target Start/End: Original strand, 3814006 - 3814103
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaa 149  Q
    |||||| ||| ||| ||||||||||||||||  ||||||||||||| ||| ||||| ||||| || | || |||||||||| ||||||||||||||||    
T  3814006 tttttttatttattgcataaataatgtatttagtctatattctataccaagtacattaattattcaacgaatctaaaaagtcaattttttcttataaa 3814103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 157
Target Start/End: Complemental strand, 11932119 - 11931977
Alignment:
Q  14 tacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatta 113  Q
    ||||||||||||| |||| || |  |||||||||||| |||||| ||| |||  |||||| ||||||||| |||||||| || |  | |||||| |||||    
T  11932119 tacttcctccggtcctatttaaa--agaaacatttaatttttttgatttattatataaatgatgtatttggtctatattttagacaagatacattaatta 11932022  T
Q  114 ctctatgagtctaaaaagttaa-ttttttcttataaataggaccg 157  Q
    | | |||| |||||||||| || ||||||||||||||||||||||    
T  11932021 cacaatgaatctaaaaagtcaatttttttcttataaataggaccg 11931977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 13664959 - 13665024
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    |||| |||||||||||||| |||||||||||| ||| ||||||| |||||||||||||||||||||    
T  13664959 atatttataagaaacatttgacttttttaattaattgcataaatgatgtatttgatctatattcta 13665024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 151
Target Start/End: Complemental strand, 22102043 - 22101922
Alignment:
Q  30 atatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||| ||||||||| |||| |||||||| ||| |||  ||||||||||||||||||||||||| || |  | |||||| |||||| | |||| |||||||    
T  22102043 atatttataagaaatatttgacttttttgatttattgtataaataatgtatttgatctatattttagacaagatacattaattacacaatgaatctaaaa 22101944  T
Q  130 agttaattttttcttataaata 151  Q
    | | || |||||||||||||||    
T  22101943 aatcaaatttttcttataaata 22101922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 34297192 - 34297314
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||||||||||| ||||||| ||||| |||||||||||| || |  | | ||||||||||||  |||| |||||||||| |    
T  34297192 tataagaaatatttgacttttttaattcattgcataaatgatgtaattgatctatattttagacaagacacatcaattacttaatgaatctaaaaagtca 34297291  T
Q  135 at---tttttcttataaatagga 154  Q
    ||   ||||| ||||||||||||    
T  34297292 atttattttttttataaatagga 34297314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 51 - 157
Target Start/End: Complemental strand, 39239909 - 39239802
Alignment:
Q  51 cttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaa-ttttttcttataaa 149  Q
    ||||||| ||||||| |||||||||| |||||||||||||||| |||  | |||||| |||||| | |||| |||||||||  || ||||||||||||||    
T  39239909 ctttttttattcattgcataaataatatatttgatctatattcaatacaagatacattaattacacaatgaatctaaaaagacaatttttttcttataaa 39239810  T
Q  150 taggaccg 157  Q
    ||| ||||    
T  39239809 tagaaccg 39239802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 154
Target Start/End: Original strand, 14913141 - 14913243
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||| ||||||| | | ||||||||||||| |||||||| |||| |||||| || |||||||| |||| | |||||| | || |||||||||||||||    
T  14913141 ttttttgattcattgcctgaataatgtatttggtctatattttatatcaaatatattaattactcaatgaatttaaaaaatcaaatttttcttataaata 14913240  T
Q  152 gga 154  Q
    |||    
T  14913241 gga 14913243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 27488480 - 27488355
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||| |||  | || |||||| ||||| |||||    | |||||||||||| |  |||| ||||||||    
T  27488480 tatatataagaaacaatttacttttttgattcattcaatagttgatatatttggtctat-ttctaggctagatacatcaattattgaatgaatctaaaaa 27488382  T
Q  131 gttaattttttcttataaataggaccg 157  Q
     ||||||||||||||||||||||||||    
T  27488381 attaattttttcttataaataggaccg 27488355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 36434713 - 36434812
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||| ||||||| ||||||| || |||||| | |||||| || |  | ||||||||||||||  |||| ||||||||||||| |||||||||||||||    
T  36434713 tttttttattcattacataaatgatatatttggtttatattttagacaagatacatcaattacttaatgaatctaaaaagttaaatttttcttataaata 36434812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 32902786 - 32902908
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||| ||||| ||||| ||| |||  ||||||||| |||||  |||||||| |||| | |||| || ||||| || |||| | |||||||  |    
T  32902786 tataagaaacaattaacctttttgattaattgtataaataatatatttagtctatattatatatcgaatatattaattattcaatgaatttaaaaagaca 32902885  T
Q  135 attttttcttataaataggaccg 157  Q
    ||||||||||||||||| |||||    
T  32902886 attttttcttataaataagaccg 32902908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 1248960 - 1248899
Alignment:
Q  35 tataagaaacatttaactttttta-attcattccataaataatgtatttgatctatattcta 95  Q
    |||||||||||||||||||||||  |||||||  |||||| |||||||||||||||||||||    
T  1248960 tataagaaacatttaacttttttttattcatttgataaatgatgtatttgatctatattcta 1248899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 92
Target Start/End: Original strand, 18391520 - 18391573
Alignment:
Q  39 agaaacatttaacttttttaattcattccataaataatgtatttgatctatatt 92  Q
    |||| ||||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  18391520 agaagcatttgacttttttgattcattgcataaataatgtatttgatctatatt 18391573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 14723480 - 14723410
Alignment:
Q  71 aataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaatttttt 141  Q
    ||||||||||||| ||||||||||| |  | ||| ||||||||||| |||| | |||||||||||||||||    
T  14723480 aataatgtatttggtctatattctagattagatatatcaattactcaatgaatttaaaaagttaatttttt 14723410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 157
Target Start/End: Original strand, 29031051 - 29031176
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    ||||||||||||||| || |||||||| |||||||  |||  | ||||||||| ||||| |||||    |  ||||||||||  |  |||| ||||||||    
T  29031051 tatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattgttgaatgaatctaaaaa 29031149  T
Q  131 gttaattttttcttataaataggaccg 157  Q
    ||||| |||||||||||||||||||||    
T  29031150 gttaactttttcttataaataggaccg 29031176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 8235428 - 8235511
Alignment:
Q  68 ataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    |||||| ||||||||||| |||||| || | |||||| || ||||| || || | |||||||| | ||||||||||||||||||    
T  8235428 ataaatgatgtatttgatttatattatagaccaaatatattaattattcaataaatctaaaaaatcaattttttcttataaata 8235511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 155
Target Start/End: Original strand, 35349498 - 35349551
Alignment:
Q  102 atacatcaattactctatgagtctaaaaagttaattttttcttataaataggac 155  Q
    ||||||||||||||| |||| |||||||||| |||| ||| |||||||| ||||    
T  35349498 atacatcaattactcaatgaatctaaaaagtcaattattttttataaattggac 35349551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 36286077 - 36286174
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagt 132  Q
    ||||||||| | || | |||||| ||||||| ||||||| ||||| ||| ||||||||||| |    ||||||||||||||| || | ||||||||||    
T  36286077 tataagaaatacttgatttttttgattcattgcataaatgatgtagttggtctatattctagacatgatacatcaattactcaattaatctaaaaagt 36286174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 14221864 - 14221920
Alignment:
Q  36 ataagaaacatttaacttttttaattcattccataaataatgtatttgatctatatt 92  Q
    ||||||||||||| |||||||| ||| ||| ||||||| || |||||||| ||||||    
T  14221864 ataagaaacatttgacttttttgattaattgcataaatgatatatttgatttatatt 14221920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 156786 - 156908
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||||||||||||||||||||||| ||||||  || |||||| ||||||||||||| ||| ||||| |||||||| ||||  ||||||| |      
T  156786 tataagaaacatttaacttttttaattcattgcataaacgatatatttggtctatattctataccaagtacattaattactcaatgaaactaaaaaatct 156885  T
Q  135 attttttcttataaataggaccg 157  Q
    |||||||||||||||||||||||    
T  156886 attttttcttataaataggaccg 156908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 1532 - 1672
Alignment:
Q  14 tacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaatta 113  Q
    ||||||||||||| |||| |||||||  ||||||| |||||||| |||| || ||||||| ||| |||||||||||| |||| | | |||||||||||||    
T  1532 tacttcctccggtcctatttatataa--aacatttgacttttttgattcgttgcataaatgatgcatttgatctatactctaga-ctaatacatcaatta 1628  T
Q  114 ctctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
     || |||| |||||||| |||||||||||||||||||| |||||    
T  1629 ttcaatgaatctaaaaaattaattttttcttataaataagaccg 1672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 6e-25; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 38 - 151
Target Start/End: Original strand, 12999776 - 12999890
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtct-aaaaagttaat 136  Q
    |||||||||||||||||||| ||||||| ||||||  ||||||||||||||||||||||| ||| ||||| |||||||| |||| ||| ||||||| ||     
T  12999776 aagaaacatttaacttttttgattcattgcataaaagatgtatttgatctatattctataccaagtacattaattactcaatgaatctgaaaaagtcaac 12999875  T
Q  137 tttttcttataaata 151  Q
    |||| ||||||||||    
T  12999876 ttttacttataaata 12999890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 35 - 150
Target Start/End: Complemental strand, 12450481 - 12450366
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||||||||||| ||||||| |||||||| ||||||||| || |  |||||||||||||| || |||| || |||||||||    
T  12450481 tataagaaatatttgacttttttaattcattgcataaatgatgtatttaatctatattttagataaaatacatcaattattcaatgaatccaaaaagtta 12450382  T
Q  135 attttttcttataaat 150  Q
    |   ||||||||||||    
T  12450381 aacatttcttataaat 12450366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 3065013 - 3064891
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||| |||| |||||||| ||||||| |||||||  |||||||| |||||||| ||||  | |||||| |||||  | |||| ||||||||| ||    
T  3065013 tataagaaatattttacttttttgattcattgcataaatggtgtatttggtctatattttatacaagatacattaattatacaatgaatctaaaaagata 3064914  T
Q  135 attttttcttataaataggaccg 157  Q
    |||||||||||||||||| ||||    
T  3064913 attttttcttataaatagaaccg 3064891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 17265739 - 17265861
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| | ||||||  ||||||||||| |  | ||||||||||||||| |||| | |||||| | |    
T  17265739 tataagaaacatttgacttttttgattcattgcataaatgacgtatttagtctatattctagacaagatacatcaattactcgatgaatttaaaaaatca 17265838  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  17265839 aatttttcttataaatatgaccg 17265861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 28630883 - 28630761
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    ||||||||||| || |||||||  ||||||| ||||||| ||||||||| |||||||| || |  | ||||||||||||||| |||| |  ||||||| |    
T  28630883 tataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaaaaaagtca 28630784  T
Q  135 attttttcttataaataggaccg 157  Q
    | |||||||||||||||||||||    
T  28630783 aatttttcttataaataggaccg 28630761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 30627953 - 30627831
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||| | ||||||| ||||||| ||||||||| |||||||| || |  | ||||||||||||||| || | | |||||| | |    
T  30627953 tataagaaacatttgacttttctgattcattgcataaatgatgtatttggtctatattttagacaagatacatcaattactcaataaatataaaaaatca 30627854  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||||||||||||||| |||||    
T  30627853 aatttttcttataaataagaccg 30627831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 155
Target Start/End: Original strand, 1158271 - 1158383
Alignment:
Q  43 acatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttc 142  Q
    ||||||||||||||  |||||||  |||| ||||||||| | ||||||||||| | ||||||||||||||| || |||  | |||||||| |||| ||||    
T  1158271 acatttaactttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattcaatgtatttaaaaagtcaattatttc 1158370  T
Q  143 ttataaataggac 155  Q
    || ||||||||||    
T  1158371 ttgtaaataggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 30895314 - 30895198
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||| |||||||| ||||||| ||||||| || |||||| ||||||||||||| ||| ||||| ||||   | |||| | |||||| | |    
T  30895314 tataagaaacatttgacttttttgattcattgcataaatgatatatttggtctatattctataccaagtacattaattgtccaatgaatttaaaaattca 30895215  T
Q  135 attttttcttataaata 151  Q
    | |||||||||||||||    
T  30895214 actttttcttataaata 30895198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 35 - 90
Target Start/End: Original strand, 21162418 - 21162473
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctata 90  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| || ||||||    
T  21162418 tataagaaacatttaacttttttaattcattgcataaataatgtatatggtctata 21162473  T

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Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 157
Target Start/End: Original strand, 10283306 - 10283434
Alignment:
Q  29 tatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaa 128  Q
    ||||| ||||| ||| |||| |||||||| ||||||   |||||| ||||||||||| |||||| || |    ||||||||||||||| || | | ||||    
T  10283306 tatatttataaaaaatatttgacttttttgattcatggtataaatgatgtatttgatatatattttagacagtatacatcaattactcaataaatttaaa 10283405  T
Q  129 aagttaattttttcttataaataggaccg 157  Q
    || ||||||||| ||||||||||||||||    
T  10283406 aaattaatttttgcttataaataggaccg 10283434  T

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Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 137
Target Start/End: Complemental strand, 27909102 - 27909002
Alignment:
Q  38 aagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactcta-tgagtctaaaaagttaat 136  Q
    ||||||||||| ||||||||||||||||  |||| | |||||||||||||||||| || | |  ||||||||||||||| | ||| |||||||||| |||    
T  27909102 aagaaacatttgacttttttaattcattgaataattgatgtatttgatctatattttagaccggatacatcaattactcaattgaatctaaaaagtcaat 27909003  T
Q  137 t 137  Q
    |    
T  27909002 t 27909002  T

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Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 35 - 157
Target Start/End: Complemental strand, 2972294 - 2972172
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||  || ||||| ||||||| ||||||| ||||||||  |||||||| || |  | ||||| ||||||||| || | |||||||||| |    
T  2972294 tataagaaacattagacgtttttgattcattgcataaatgatgtattttgtctatattttagataagatacaccaattactcaataaatctaaaaagtca 2972195  T
Q  135 attttttcttataaataggaccg 157  Q
    | ||| ||||||||||| |||||    
T  2972194 aatttctcttataaataagaccg 2972172  T

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Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 157
Target Start/End: Original strand, 2230400 - 2230489
Alignment:
Q  68 ataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaataggaccg 157  Q
    |||||| ||||| ||| ||||||||||| |  | |||||| |||||||| |||| |||||||||| ||  ||||||||||||||||||||    
T  2230400 ataaatgatgtacttggtctatattctagacaagatacattaattactcaatgaatctaaaaagtcaaagttttcttataaataggaccg 2230489  T

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Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 154
Target Start/End: Original strand, 7257358 - 7257467
Alignment:
Q  45 atttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttctt 144  Q
    |||| |||||||| ||||||| |||||||||  |||||    |||||| |||| ||||||||| ||||| || |||| | |||||||| |||||| | ||    
T  7257358 atttgactttttttattcattgcataaataacttatttagcttatattatatatcaaatacattaattattcaatgaatttaaaaagtcaattttatttt 7257457  T
Q  145 ataaatagga 154  Q
    ||||||||||    
T  7257458 ataaatagga 7257467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 7649912 - 7649807
Alignment:
Q  52 ttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataaata 151  Q
    ||||| ||||||||  |||| | || |||||| | |||||| || | ||||||||||||||| || |||| ||||||||| ||||| ||| |||||||||    
T  7649912 tttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatcaattattcaatgaatctaaaaagataattatttattataaata 7649813  T
Q  152 ggaccg 157  Q
     |||||    
T  7649812 agaccg 7649807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 148
Target Start/End: Original strand, 16120995 - 16121092
Alignment:
Q  51 cttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttcttataa 148  Q
    |||||| ||||||||| |||||| ||||| ||| |||||||| |  | ||||||||||| ||| |  |||| ||||||||||| |||||| |||||||    
T  16120995 ctttttaaattcattcaataaatgatgtacttggtctatattattgaccaaatacatcatttatttaatgaatctaaaaagttgatttttgcttataa 16121092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 9077716 - 9077656
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    ||||||||| |||| |||||||| ||||||| ||||||| ||| ||||| |||||||||||    
T  9077716 tataagaaatatttgacttttttgattcattgcataaatgatgcatttggtctatattcta 9077656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 95
Target Start/End: Complemental strand, 8053005 - 8052926
Alignment:
Q  14 tacttcctccggtgctatatatataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    |||||||||||||   |||| ||||||||| |||| ||||||||||||||||  | |||||||||||||  ||| |||||||    
T  8053005 tacttcctccggtc--atatttataagaaatatttgacttttttaattcattgtacaaataatgtatttagtctttattcta 8052926  T

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Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 148
Target Start/End: Complemental strand, 28863450 - 28863337
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||||||||| || ||| ||| ||| ||||||| ||||||||| | ||||||||| |  | |||||| |||||  | ||||  ||||||| | |    
T  28863450 tataagaaacatttaaattctttgatttattgcataaatgatgtatttggtttatattctagacaagatacataaattatacaatgaaactaaaaaatca 28863351  T
Q  135 attttttcttataa 148  Q
    ||||| ||||||||    
T  28863350 attttatcttataa 28863337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 92
Target Start/End: Complemental strand, 3046738 - 3046686
Alignment:
Q  40 gaaacatttaacttttttaattcattccataaataatgtatttgatctatatt 92  Q
    ||||||||| |||||||||||||||| | ||||| |||||| || ||||||||    
T  3046738 gaaacatttgacttttttaattcattacttaaatgatgtatgtggtctatatt 3046686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 30438808 - 30438760
Alignment:
Q  100 aaatacatcaattactctatgagtctaaaaagttaattttttcttataa 148  Q
    |||||||| ||||| ||||||| |||||||||| || ||||||||||||    
T  30438808 aaatacattaattattctatgaatctaaaaagtcaactttttcttataa 30438760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 31 - 157
Target Start/End: Complemental strand, 40280 - 40153
Alignment:
Q  31 tatatataagaaacatttaacttttttaattcattccataaa-taatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaa 129  Q
    |||||| || ||| |||| | ||||||||||||||||||||| | ||||||||| |||||||| |||| || |||||||||||||   |||| ||||||     
T  40280 tatatacaataaatatttgatttttttaattcattccataaaatgatgtatttggtctatattttatatcagatacatcaattacataatgaatctaaag 40181  T
Q  130 agttaattttttcttataaataggaccg 157  Q
    ||||||||||| ||||||||||| ||||    
T  40180 agttaatttttccttataaatagaaccg 40153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 151
Target Start/End: Complemental strand, 16659 - 16543
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagtta 134  Q
    |||||||||| ||| |||||||| |||||||  |||||||||||||||| |||||||||||    | || |||||||||||| |||| |  |||||||||    
T  16659 tataagaaacgtttgacttttttgattcattgtataaataatgtatttggtctatattctagtcaagatgcatcaattactcaatgaattaaaaaagtta 16560  T
Q  135 attttttcttataaata 151  Q
    | |||||||||||||||    
T  16559 aatttttcttataaata 16543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 2609 - 2539
Alignment:
Q  60 ttcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaa 130  Q
    |||||| ||||||  ||||||||||||||||||||||| ||||||||| |||||||| |||| ||||||||    
T  2609 ttcattgcataaacgatgtatttgatctatattctatatcaaatacattaattactcaatgaatctaaaaa 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 16677 - 16788
Alignment:
Q  43 acatttaacttttttaattcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagttaattttttc 142  Q
    |||||| |||||||| ||||||| ||||||  ||||||||| ||||||||||| |  | ||||||||||||||| |||| | |  ||||| || ||||||    
T  16677 acatttgacttttttgattcattgcataaaatatgtatttggtctatattctagacaagatacatcaattactcaatgaattt--aaagtcaa-tttttc 16773  T
Q  143 ttataaataggaccg 157  Q
    |||||||||||||||    
T  16774 ttataaataggaccg 16788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 157
Target Start/End: Original strand, 28105 - 28229
Alignment:
Q  35 tataagaaacatttaactttttta--attcattccataaataatgtatttgatctatattctataacaaatacatcaattactctatgagtctaaaaagt 132  Q
    ||||||||| |||||||||||||   ||||||| ||||||| |||||||||||||||||| || |  | ||| |||||||| || || | | | ||||||    
T  28105 tataagaaatatttaacttttttgtgattcattgcataaatgatgtatttgatctatattttagacaagatatatcaattattcaataaattttaaaagt 28204  T
Q  133 taattttttcttataaataggaccg 157  Q
     || ||||||||||| |||||||||    
T  28205 caaatttttcttatatataggaccg 28229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0778 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 5290 - 5351
Alignment:
Q  35 tataagaaacatttaacttttttaattcattccataaataatgtatttgatctatattctata 97  Q
    |||||||||||||| ||||||||| || ||| ||||||| ||||||||| |||||||||||||    
T  5290 tataagaaacatttgactttttta-ttgattgcataaattatgtatttggtctatattctata 5351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 1558 - 1507
Alignment:
Q  43 acatttaacttttttaattcattccataaataatgtatttgatctatattcta 95  Q
    |||||| |||||||| |||||| | |||||| |||||||||||||||||||||    
T  1558 acatttgacttttttgattcatgc-ataaatgatgtatttgatctatattcta 1507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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