View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1335_low_38 (Length: 270)

Name: NF1335_low_38
Description: NF1335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1335_low_38
NF1335_low_38
[»] chr8 (67 HSPs)
chr8 (54-270)||(17841699-17841916)
chr8 (54-270)||(40779978-40780195)
chr8 (54-269)||(32064744-32064961)
chr8 (54-269)||(6108083-6108299)
chr8 (55-270)||(35353041-35353257)
chr8 (58-270)||(8453837-8454049)
chr8 (54-268)||(42754893-42755108)
chr8 (54-270)||(26041962-26042182)
chr8 (54-270)||(15187559-15187776)
chr8 (54-270)||(37985905-37986121)
chr8 (55-270)||(34665382-34665597)
chr8 (55-270)||(20091650-20091866)
chr8 (54-270)||(1645813-1646031)
chr8 (55-270)||(32393858-32394073)
chr8 (60-269)||(25581089-25581299)
chr8 (55-215)||(24211458-24211618)
chr8 (85-270)||(3596890-3597076)
chr8 (56-270)||(14128865-14129075)
chr8 (54-269)||(39772652-39772867)
chr8 (54-215)||(31347687-31347848)
chr8 (54-215)||(41819683-41819844)
chr8 (54-215)||(7017770-7017931)
chr8 (56-210)||(27782027-27782181)
chr8 (65-215)||(7021988-7022138)
chr8 (54-215)||(24844764-24844924)
chr8 (55-215)||(27835358-27835518)
chr8 (55-215)||(30834960-30835111)
chr8 (85-215)||(3890522-3890651)
chr8 (102-270)||(10044390-10044564)
chr8 (63-131)||(38016979-38017047)
chr8 (85-183)||(15972814-15972912)
chr8 (168-259)||(38017047-38017137)
chr8 (153-269)||(30055615-30055731)
chr8 (55-127)||(37132651-37132723)
chr8 (59-134)||(3890413-3890488)
chr8 (224-270)||(24211221-24211267)
chr8 (59-132)||(1503642-1503714)
chr8 (59-132)||(17841649-17841721)
chr8 (59-132)||(20091600-20091672)
chr8 (59-132)||(26041912-26041984)
chr8 (59-132)||(34665575-34665647)
chr8 (59-132)||(37132479-37132552)
chr8 (59-132)||(40779928-40780000)
chr8 (85-136)||(3817914-3817965)
chr8 (59-132)||(6108032-6108104)
chr8 (59-132)||(10044542-10044614)
chr8 (59-132)||(14129053-14129125)
chr8 (67-132)||(30834862-30834927)
chr8 (59-132)||(31347575-31347647)
chr8 (59-132)||(37985855-37985927)
chr8 (230-270)||(1503692-1503732)
chr8 (66-134)||(35353233-35353300)
chr8 (59-134)||(30055708-30055782)
chr8 (55-135)||(30055543-30055616)
chr8 (149-269)||(37132531-37132647)
chr8 (59-132)||(24211171-24211243)
chr8 (59-132)||(25581038-25581110)
chr8 (59-132)||(32064940-32065012)
chr8 (59-132)||(42754841-42754913)
chr8 (67-118)||(1886621-1886672)
chr8 (77-132)||(8454027-8454082)
chr8 (67-134)||(24844667-24844734)
chr8 (85-132)||(41819592-41819639)
chr8 (236-270)||(31347625-31347659)
chr8 (59-132)||(1645763-1645835)
chr8 (59-132)||(15187754-15187826)
chr8 (232-269)||(41819618-41819655)
[»] chr3 (60 HSPs)
chr3 (54-270)||(3137263-3137480)
chr3 (54-270)||(2754716-2754935)
chr3 (55-257)||(3456064-3456267)
chr3 (55-270)||(6041884-6042093)
chr3 (54-270)||(33113792-33114010)
chr3 (54-269)||(3574376-3574593)
chr3 (54-266)||(37522052-37522265)
chr3 (54-270)||(22426194-22426410)
chr3 (55-268)||(37216904-37217118)
chr3 (55-215)||(30385011-30385171)
chr3 (54-206)||(34482824-34482976)
chr3 (55-269)||(48160905-48161121)
chr3 (55-269)||(19650750-19650965)
chr3 (55-270)||(8320431-8320649)
chr3 (54-260)||(11347267-11347475)
chr3 (54-215)||(42297352-42297514)
chr3 (55-269)||(33145713-33145927)
chr3 (93-270)||(3089455-3089635)
chr3 (55-215)||(8361950-8362110)
chr3 (53-269)||(36864883-36865094)
chr3 (56-215)||(9796934-9797093)
chr3 (111-269)||(42297920-42298077)
chr3 (67-215)||(47738117-47738265)
chr3 (54-215)||(24343546-24343707)
chr3 (54-269)||(33839530-33839750)
chr3 (85-215)||(41883128-41883258)
chr3 (55-215)||(41224233-41224393)
chr3 (66-181)||(42921154-42921269)
chr3 (127-215)||(40327897-40327985)
chr3 (179-270)||(30385525-30385616)
chr3 (54-160)||(26612784-26612890)
chr3 (59-132)||(40328025-40328098)
chr3 (224-270)||(34482737-34482783)
chr3 (59-132)||(3137213-3137285)
chr3 (59-132)||(34482687-34482759)
chr3 (59-132)||(36864831-36864904)
chr3 (67-132)||(47738305-47738370)
chr3 (64-132)||(33839729-33839797)
chr3 (59-132)||(8361838-8361910)
chr3 (59-132)||(30385594-30385666)
chr3 (59-132)||(33113988-33114060)
chr3 (59-132)||(33145906-33145978)
chr3 (59-132)||(37522247-37522319)
chr3 (59-132)||(41224428-41224500)
chr3 (224-270)||(26612916-26612962)
chr3 (59-132)||(6042071-6042143)
chr3 (59-132)||(8320381-8320453)
chr3 (59-132)||(9796828-9796900)
chr3 (59-132)||(22426144-22426216)
chr3 (67-132)||(26612940-26613005)
chr3 (59-132)||(37216852-37216924)
chr3 (59-132)||(42921319-42921392)
chr3 (112-266)||(46918959-46919106)
chr3 (67-132)||(46919088-46919153)
chr3 (58-92)||(40327878-40327912)
chr3 (224-270)||(47738281-47738327)
chr3 (59-132)||(3089613-3089685)
chr3 (59-132)||(19650699-19650771)
chr3 (67-132)||(24343743-24343808)
chr3 (54-83)||(47402633-47402662)
[»] chr5 (37 HSPs)
chr5 (54-270)||(4892201-4892418)
chr5 (55-270)||(25398238-25398454)
chr5 (55-270)||(33584178-33584394)
chr5 (54-270)||(6043361-6043577)
chr5 (54-269)||(3362777-3362994)
chr5 (55-270)||(3521856-3522071)
chr5 (55-270)||(4433857-4434072)
chr5 (55-270)||(12850801-12851018)
chr5 (54-270)||(38899575-38899792)
chr5 (55-270)||(11360980-11361196)
chr5 (54-270)||(14138667-14138883)
chr5 (54-270)||(8145374-8145589)
chr5 (54-270)||(2477635-2477852)
chr5 (55-270)||(37321642-37321859)
chr5 (55-270)||(22912906-22913119)
chr5 (55-211)||(17545594-17545750)
chr5 (85-215)||(31640845-31640975)
chr5 (55-182)||(12614671-12614798)
chr5 (59-215)||(27481830-27481982)
chr5 (59-132)||(4892396-4892468)
chr5 (59-132)||(22912856-22912928)
chr5 (59-132)||(33584128-33584200)
chr5 (67-123)||(10458409-10458465)
chr5 (224-270)||(12614587-12614633)
chr5 (59-132)||(3521806-3521878)
chr5 (59-132)||(6043311-6043383)
chr5 (59-132)||(8145567-8145639)
chr5 (59-132)||(12850996-12851068)
chr5 (59-132)||(25398432-25398504)
chr5 (146-215)||(36880228-36880297)
chr5 (59-132)||(38899524-38899597)
chr5 (59-132)||(12614536-12614609)
chr5 (59-132)||(14138861-14138933)
chr5 (59-132)||(37321592-37321664)
chr5 (59-132)||(3362973-3363045)
chr5 (95-132)||(13664753-13664790)
chr5 (72-133)||(27482016-27482077)
[»] chr2 (34 HSPs)
chr2 (54-270)||(23267911-23268128)
chr2 (55-270)||(33380207-33380423)
chr2 (54-266)||(7475361-7475574)
chr2 (54-270)||(35160756-35160975)
chr2 (56-269)||(10661888-10662103)
chr2 (54-269)||(9293425-9293642)
chr2 (58-269)||(31174685-31174896)
chr2 (55-270)||(21936081-21936298)
chr2 (54-270)||(13354845-13355064)
chr2 (85-269)||(3989106-3989291)
chr2 (54-215)||(14941272-14941432)
chr2 (54-215)||(43330911-43331072)
chr2 (57-215)||(21393593-21393751)
chr2 (54-216)||(27847631-27847793)
chr2 (55-215)||(9723405-9723565)
chr2 (67-212)||(22591494-22591639)
chr2 (65-215)||(16767377-16767527)
chr2 (127-215)||(40262641-40262729)
chr2 (59-133)||(22592905-22592979)
chr2 (59-132)||(33380401-33380473)
chr2 (59-132)||(35160953-35161025)
chr2 (95-171)||(37335753-37335829)
chr2 (59-132)||(9293374-9293446)
chr2 (59-132)||(10662082-10662154)
chr2 (59-132)||(23267861-23267933)
chr2 (94-132)||(34320990-34321028)
chr2 (59-132)||(7475307-7475379)
chr2 (67-132)||(9723600-9723665)
chr2 (59-132)||(21393485-21393556)
chr2 (59-132)||(43331106-43331178)
chr2 (234-268)||(43331092-43331126)
chr2 (59-132)||(13355042-13355114)
chr2 (224-269)||(16767312-16767357)
chr2 (234-270)||(34321006-34321042)
[»] chr1 (48 HSPs)
chr1 (54-270)||(19015403-19015620)
chr1 (55-270)||(36966557-36966773)
chr1 (55-269)||(37821684-37821899)
chr1 (55-269)||(44094698-44094912)
chr1 (55-260)||(6883487-6883693)
chr1 (54-270)||(41876291-41876508)
chr1 (55-270)||(40214988-40215204)
chr1 (54-270)||(25463675-25463892)
chr1 (55-270)||(9910140-9910358)
chr1 (58-269)||(3559620-3559832)
chr1 (55-270)||(51737510-51737721)
chr1 (54-269)||(25973413-25973622)
chr1 (54-270)||(18404441-18404664)
chr1 (54-215)||(40273701-40273862)
chr1 (54-215)||(27523160-27523323)
chr1 (55-215)||(32000172-32000332)
chr1 (54-172)||(16045746-16045864)
chr1 (55-215)||(44690934-44691094)
chr1 (59-212)||(33786543-33786695)
chr1 (128-270)||(20304979-20305123)
chr1 (54-171)||(34519757-34519874)
chr1 (131-215)||(52329345-52329428)
chr1 (85-268)||(10167430-10167613)
chr1 (67-131)||(44690828-44690892)
chr1 (59-132)||(19015598-19015670)
chr1 (59-132)||(32000065-32000137)
chr1 (59-132)||(33786430-33786502)
chr1 (59-132)||(40273902-40273974)
chr1 (59-132)||(51737699-51737771)
chr1 (59-132)||(6883681-6883753)
chr1 (67-132)||(9910098-9910162)
chr1 (59-132)||(20304929-20305001)
chr1 (59-132)||(37821633-37821705)
chr1 (59-132)||(40215182-40215254)
chr1 (59-132)||(41876241-41876313)
chr1 (59-128)||(52064376-52064445)
chr1 (59-134)||(27523054-27523129)
chr1 (127-215)||(51621002-51621086)
chr1 (59-132)||(25463870-25463942)
chr1 (59-132)||(25973601-25973673)
chr1 (95-132)||(52329469-52329506)
chr1 (54-92)||(51620979-51621017)
chr1 (59-132)||(18404642-18404714)
chr1 (67-132)||(19722906-19722970)
chr1 (54-82)||(9389275-9389303)
chr1 (234-270)||(32000115-32000151)
chr1 (234-270)||(33786480-33786516)
chr1 (234-270)||(40273888-40273924)
[»] chr4 (54 HSPs)
chr4 (54-268)||(47290065-47290280)
chr4 (54-270)||(31078668-31078885)
chr4 (54-270)||(36073349-36073565)
chr4 (50-270)||(53123025-53123247)
chr4 (54-270)||(44893425-44893642)
chr4 (54-269)||(24128238-24128454)
chr4 (55-270)||(46441844-46442060)
chr4 (55-270)||(49387736-49387953)
chr4 (55-270)||(36072947-36073167)
chr4 (54-270)||(44893062-44893280)
chr4 (55-270)||(2624837-2625053)
chr4 (53-270)||(4751444-4751663)
chr4 (56-270)||(7744961-7745176)
chr4 (54-255)||(50156442-50156644)
chr4 (54-270)||(10442636-10442855)
chr4 (55-270)||(22199261-22199475)
chr4 (54-269)||(21802170-21802388)
chr4 (85-270)||(9088900-9089086)
chr4 (54-266)||(23964317-23964531)
chr4 (54-270)||(33530533-33530754)
chr4 (54-269)||(37934792-37935007)
chr4 (87-259)||(17655462-17655635)
chr4 (54-215)||(24392666-24392827)
chr4 (61-213)||(42671675-42671827)
chr4 (85-269)||(30563239-30563424)
chr4 (101-215)||(37219671-37219785)
chr4 (68-213)||(36073650-36073795)
chr4 (72-215)||(44744452-44744594)
chr4 (127-215)||(9111337-9111425)
chr4 (99-170)||(11314184-11314255)
chr4 (59-129)||(25063373-25063443)
chr4 (59-132)||(36073543-36073615)
chr4 (67-132)||(37219825-37219890)
chr4 (59-132)||(46442038-46442110)
chr4 (59-131)||(11314050-11314122)
chr4 (59-132)||(9089064-9089136)
chr4 (59-132)||(10442586-10442658)
chr4 (59-132)||(21802119-21802191)
chr4 (59-132)||(44893012-44893084)
chr4 (59-132)||(44893620-44893692)
chr4 (59-132)||(47290260-47290332)
chr4 (59-132)||(53123225-53123297)
chr4 (59-132)||(22199453-22199525)
chr4 (59-132)||(31078618-31078690)
chr4 (59-132)||(36073145-36073217)
chr4 (67-132)||(42671862-42671927)
chr4 (87-132)||(49387713-49387758)
chr4 (59-132)||(4751641-4751713)
chr4 (67-132)||(7744919-7744983)
chr4 (59-132)||(17655624-17655697)
chr4 (59-132)||(24128433-24128505)
chr4 (59-132)||(24392868-24392940)
chr4 (59-132)||(33530483-33530555)
chr4 (67-132)||(50156386-50156449)
[»] scaffold0204 (1 HSPs)
scaffold0204 (54-270)||(4395-4612)
[»] scaffold0085 (2 HSPs)
scaffold0085 (55-270)||(47850-48065)
scaffold0085 (59-132)||(48043-48115)
[»] scaffold0471 (2 HSPs)
scaffold0471 (54-269)||(12841-13057)
scaffold0471 (59-132)||(13036-13108)
[»] chr6 (35 HSPs)
chr6 (54-270)||(33696695-33696913)
chr6 (54-269)||(33695176-33695393)
chr6 (55-268)||(17175872-17176086)
chr6 (54-270)||(18365423-18365639)
chr6 (54-270)||(18370687-18370903)
chr6 (54-270)||(23290930-23291150)
chr6 (54-269)||(28675147-28675363)
chr6 (55-270)||(6031589-6031806)
chr6 (55-250)||(25986930-25987126)
chr6 (66-269)||(32702216-32702420)
chr6 (55-269)||(17705319-17705530)
chr6 (54-270)||(6127274-6127493)
chr6 (54-256)||(9752109-9752310)
chr6 (54-270)||(2309272-2309489)
chr6 (61-215)||(11548494-11548647)
chr6 (58-255)||(8515591-8515787)
chr6 (52-134)||(18889683-18889764)
chr6 (166-270)||(18889493-18889597)
chr6 (59-132)||(29693639-29693712)
chr6 (159-215)||(29693542-29693598)
chr6 (59-132)||(11548388-11548460)
chr6 (59-132)||(28675342-28675414)
chr6 (95-132)||(2309257-2309294)
chr6 (59-132)||(17175820-17175892)
chr6 (59-132)||(32702399-32702471)
chr6 (59-132)||(33696891-33696963)
chr6 (59-122)||(34238886-34238948)
chr6 (67-132)||(582534-582600)
chr6 (88-118)||(18889593-18889623)
chr6 (67-132)||(6031547-6031611)
chr6 (59-132)||(17705268-17705339)
chr6 (59-132)||(18365373-18365445)
chr6 (59-132)||(18370637-18370709)
chr6 (95-132)||(18889478-18889515)
chr6 (234-270)||(11548438-11548474)
[»] scaffold0096 (1 HSPs)
scaffold0096 (54-268)||(41010-41224)
[»] chr7 (39 HSPs)
chr7 (54-270)||(45637711-45637927)
chr7 (55-270)||(48880776-48880992)
chr7 (55-270)||(3961979-3962194)
chr7 (55-270)||(4974584-4974800)
chr7 (55-270)||(42611811-42612027)
chr7 (55-270)||(24394972-24395187)
chr7 (55-216)||(25167754-25167915)
chr7 (54-211)||(35444557-35444714)
chr7 (55-270)||(34482835-34483054)
chr7 (54-270)||(15329272-15329490)
chr7 (54-269)||(15577697-15577916)
chr7 (85-270)||(30848599-30848785)
chr7 (55-255)||(20009963-20010162)
chr7 (54-215)||(37476985-37477146)
chr7 (54-215)||(18036977-18037138)
chr7 (59-269)||(29737143-29737359)
chr7 (55-211)||(15238382-15238538)
chr7 (54-268)||(42696082-42696297)
chr7 (58-215)||(36790371-36790528)
chr7 (85-204)||(40880708-40880827)
chr7 (224-270)||(35876414-35876460)
chr7 (59-132)||(25167655-25167727)
chr7 (224-269)||(35445567-35445612)
chr7 (59-132)||(4974534-4974606)
chr7 (67-132)||(42696277-42696342)
chr7 (59-132)||(48880726-48880798)
chr7 (59-132)||(3962172-3962244)
chr7 (59-132)||(24395165-24395237)
chr7 (67-132)||(29737338-29737403)
chr7 (59-132)||(30848763-30848835)
chr7 (67-132)||(34483032-34483096)
chr7 (59-132)||(35445591-35445663)
chr7 (59-132)||(37476879-37476951)
chr7 (59-132)||(45637905-45637977)
chr7 (59-132)||(15329468-15329540)
chr7 (59-132)||(15577646-15577718)
chr7 (59-132)||(18037171-18037243)
chr7 (59-132)||(42612005-42612077)
chr7 (234-270)||(37476929-37476965)
[»] scaffold0178 (2 HSPs)
scaffold0178 (55-270)||(11621-11837)
scaffold0178 (67-132)||(11815-11879)
[»] scaffold0228 (5 HSPs)
scaffold0228 (66-270)||(25947-26152)
scaffold0228 (66-270)||(15995-16200)
scaffold0228 (66-257)||(8413-8605)
scaffold0228 (59-132)||(26130-26202)
scaffold0228 (59-132)||(16178-16250)
[»] scaffold0665 (1 HSPs)
scaffold0665 (56-215)||(3069-3223)
[»] scaffold0041 (1 HSPs)
scaffold0041 (85-204)||(85456-85575)


Alignment Details
Target: chr8 (Bit Score: 177; Significance: 2e-95; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 17841916 - 17841699
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17841916 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 17841817  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  17841816 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 17841717  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  17841716 taaaggtgattattgtgc 17841699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 40780195 - 40779978
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40780195 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 40780096  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||        |||||||||||||||||||||||||||||    
T  40780095 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 40779996  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  40779995 taaaggtgattattgtgc 40779978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 32064744 - 32064961
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32064744 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataattctgaaa 32064843  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc--nnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||         ||||||||||||||||||||||||||||    
T  32064844 ttaatgttaaccaataaaatctcagcctggccggaaatcatgggctgatgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaat 32064943  T
Q  252 ctaaaggtgtttattgtg 269  Q
    ||||||||| ||||||||    
T  32064944 ctaaaggtgattattgtg 32064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 6108299 - 6108083
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6108299 agagcaatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 6108200  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  6108199 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttctttttatgaaagattaataaatgagactgaaatc 6108100  T
Q  253 taaaggtgtttattgtg 269  Q
    |||||||| ||||||||    
T  6108099 taaaggtgattattgtg 6108083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 35353041 - 35353257
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35353041 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaataatcatgaaat 35353140  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||        ||||||||||||||||||||| | |||| |    
T  35353141 taatgttaaccaataaaatctcagcctggccggaaatcatgaggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagattaaaattt 35353240  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  35353241 aaaggtgattattgtgc 35353257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 58 - 270
Target Start/End: Original strand, 8453837 - 8454049
Alignment:
Q  58 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaa 157  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||||||    
T  8453837 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatcacccttagattttatcaagaaatagtcctgaaattaa 8453936  T
Q  158 tgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaag 257  Q
    ||| |  ||||||||||||||||||||||||||| |||| ||| |||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  8453937 tgtaacacaataaaatctcagcctggccggaaattatggtgtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatctaaag 8454036  T
Q  258 gtgtttattgtgc 270  Q
    ||| |||||||||    
T  8454037 gtgattattgtgc 8454049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 54 - 268
Target Start/End: Complemental strand, 42755108 - 42754893
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  42755108 agagcaatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcatgaaa 42755009  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| |        |||||||||||||||||||||||||||||    
T  42755008 ttaatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatc 42754909  T
Q  253 taaaggtgtttattgt 268  Q
    |||||||| |||||||    
T  42754908 taaaggtgattattgt 42754893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 26042182 - 26041962
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttt---atcaagaaataatcctg 150  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||| |||||    
T  26042182 agagcaatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagatttttttatcaagaaatagtcctg 26042083  T
Q  151 aaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaa 249  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||    
T  26042082 aaattaatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaa 26041983  T
Q  250 atctaaaggtgtttattgtgc 270  Q
    ||||||||||| |||||||||    
T  26041982 atctaaaggtgattattgtgc 26041962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 15187559 - 15187776
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  15187559 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaa 15187658  T
Q  154 ttaatgttaaccaataaaatctc-agcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||||||||        |||||||||||||||||||||||||||||    
T  15187659 ttaatgttagccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatc 15187758  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  15187759 taaaggtgattattgtgc 15187776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 37986121 - 37985905
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  37986121 agagtaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 37986022  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||| ||||||||||||||        |||||||||||||||||| |||||||||||    
T  37986021 ttaatgctagccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgggactgaaatct 37985922  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  37985921 aaaggtgattattgtgc 37985905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 34665382 - 34665597
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  34665382 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 34665481  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| |||||||||||||||| |||||| ||||||||| ||| ||||||||||||||        ||||||| |||||||||||||||||||||||    
T  34665482 taatgttagccaataaaatctcagcttggccgaaaatcatggagtggtgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatcta 34665581  T
Q  255 aaggtgtttattgtgc 270  Q
    | |||| |||||||||    
T  34665582 agggtgattattgtgc 34665597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 20091866 - 20091650
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  20091866 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatcgtcctgaaat 20091767  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||| |        ||||||| ||||||||||||||||||||||    
T  20091766 taatgttagccaataaaatctcagcctagccggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatct 20091667  T
Q  254 aaaggtgtttattgtgc 270  Q
    || |||| |||||||||    
T  20091666 aagggtgattattgtgc 20091650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 1646031 - 1645813
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||    
T  1646031 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 1645932  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||| | |||||||||||||||||| |||||||||||||||| |||||||||||||  |        ||||||||||||||||||||||||||||    
T  1645931 ttaatgttagctaataaaatctcagcctggtcggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaat 1645832  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||||||| |||||||||    
T  1645831 ctaaaggtgattattgtgc 1645813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 32393858 - 32394073
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  32393858 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaat 32393957  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| ||||||||||||||| || |||| ||||||||||||| | ||||||||||||        |||||||||||||||||||||||||||||||    
T  32393958 taatgttagccaataaaatctcagtctagccgaaaatcatggggtggtaggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 32394057  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  32394058 aaggtgattattgtgc 32394073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 60 - 269
Target Start/End: Complemental strand, 25581299 - 25581089
Alignment:
Q  60 atgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatg 159  Q
    ||||||||||||||||||| ||||   |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatcacctttagattttatcaagaaatagtcctgaaattaatg 25581200  T
Q  160 ttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaagg 258  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||||||    
T  25581199 ttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagg 25581100  T
Q  259 tgtttattgtg 269  Q
    || ||||||||    
T  25581099 tgattattgtg 25581089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 24211618 - 24211458
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| || ||||||    
T  24211618 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatcacccttaaattttatcaagaaatagtcttgaaat 24211519  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24211518 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtat 24211458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 85 - 270
Target Start/End: Complemental strand, 3597076 - 3596890
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |    
T  3597076 tcaagaaagtttcaagaatgacatggcagaataattacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctgac 3596977  T
Q  185 cggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  3596976 cggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 3596890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 56 - 270
Target Start/End: Original strand, 14128865 - 14129075
Alignment:
Q  56 agcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatt 155  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  14128865 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaatt 14128964  T
Q  156 aatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    ||||||| |||||||||||||||||     | ||||||| ||||| ||||||||||||| |        |||||||||||||||||||||||||||||||    
T  14128965 aatgttagccaataaaatctcagcc-----gaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatcta 14129059  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  14129060 aaggtgattattgtgc 14129075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 39772867 - 39772652
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  39772867 agagcaatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaaaaaatagtcttgaaa 39772768  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||| |||||||||||||||||  ||||||||||||||| || ||||||||||||| |        |||||||||||||||| || |||||||||    
T  39772767 ttaatgttagccaataaaatctcagcc-agccggaaatcatgggatggtgggtgttatgtattttttttttatgaaagattaataaacgaaactgaaatc 39772669  T
Q  253 taaaggtgtttattgtg 269  Q
    |||||||| ||||||||    
T  39772668 taaaggtgattattgtg 39772652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 31347848 - 31347687
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  31347848 agagcaatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaa 31347749  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||||||||||| | | |||| |||||||||||||  ||||||||||||||    
T  31347748 ttaatgttagccaataaaatctctgtcgggccagaaatcatggggtagtgggtgttatgtat 31347687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 41819844 - 41819683
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| |||||||  ||| |||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  41819844 agagcaatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatcacccttagattttatcaagaaattgtcctgaaa 41819745  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||| || |||||||||||    
T  41819744 ttaatgttagccaataaaatctcagcccggccggaaatcatggggtggtgtgtgttatgtat 41819683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 7017931 - 7017770
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||| |||||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||  | || |||    
T  7017931 agagcaatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatcatccttagattttatcaagaaattgtactaaaa 7017832  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||||||||||| | | ||||||||||||||||||| ||||||||||||||    
T  7017831 ttaatgttagccaataaaatctctgtcgggccggaaatcatggggtggtgggtgttatgtat 7017770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 56 - 210
Target Start/End: Complemental strand, 27782181 - 27782027
Alignment:
Q  56 agcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatt 155  Q
    |||||||||||||||||||||| ||||| ||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||  || |||||||    
T  27782181 agcaatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatcacccttagattttatcaagaaattgtcttgaaatt 27782082  T
Q  156 aatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgtta 210  Q
    ||||||| |||||||||||| || ||||||||||||||| ||||| |||||||||    
T  27782081 aatgttagccaataaaatcttagtctggccggaaatcattgggtggtgggtgtta 27782027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 7021988 - 7022138
Alignment:
Q  65 atatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaac 164  Q
    ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  | | ||||||||||||| |    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatcacccttagattttatcaagaaattgtaccgaaattaatgttagc 7022087  T
Q  165 caataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||  | | ||||||||||||||||||| ||||||||||||||    
T  7022088 caataaaatctatgtcgggccggaaatcatggggtggtgggtgttatgtat 7022138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 24844924 - 24844764
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||| ||||||| ||||||||||| ||||| | ||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||  ||| ||||    
T  24844924 agagaaatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatgaca-aataatcacccttagattttatcaagaaattgtcccgaaa 24844826  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| |||||||||||||| ||||   ||||||||| ||||| ||||||||||||||    
T  24844825 ttaatgttagccaataaaatctcatcctgattggaaatcatagggtggtgggtgttatgtat 24844764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 27835518 - 27835358
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||| |||||| || | ||||||| |||||||||||||||| | |||||||| ||||||||||||| || ||||  || | ||||    
T  27835518 gagcaatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatcatccttagattttattaaaaaattgtcttcaaat 27835419  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||| |||||||||||||||||| | ||||||||||||| || ||||||||||||||    
T  27835418 taatgttagccaataaaatctcagcctagacggaaatcatgggatggtgggtgttatgtat 27835358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 30835111 - 30834960
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||| |||||||||||||||||||| || | |||||| |||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||    
T  30835111 gagcaatgttatatatcaagaaagattttatcgaaaaaatt-caagaatgacatggcagaataatcaccctttgattttatcaagaaattgtcctgaaat 30835013  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||  |||||||||||||        ||||||||||||||| ||||||||||||||    
T  30835012 taatgttagtcaataaaatctca--------ggaaatcatggggtggtgggtgttatgtat 30834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 3890651 - 3890522
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  ||  ||||||||||||| |||||||||||||| | ||||    
T  3890651 tcaagaaaaattcaagaatgacatggcagaataatcacc-ttagattttatcaagaaattgtctcgaaattaatgttagccaataaaatctcatcatggc 3890553  T
Q  185 cggaaatcatggggtgatgggtgttatgtat 215  Q
     | ||||||||||||| ||||||||||||||    
T  3890552 tgaaaatcatggggtggtgggtgttatgtat 3890522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 270
Target Start/End: Original strand, 10044390 - 10044564
Alignment:
Q  102 atgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtga 201  Q
    |||||||| ||||||||||| ||||| |||||||||||||||| |  || ||||||||||| ||||||||||||||  |||| |||||||||||| |||     
T  10044390 atgacatgacagaataatcatccttaaattttatcaagaaatagttttggaattaatgttagccaataaaatctcaatctggtcggaaatcatggagtgg 10044489  T
Q  202 tgggtgttatgta------tcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||| |||||||||      |        ||||||||||||||||||||| ||||||||||||||| |||||||||    
T  10044490 tggttgttatgtatttttttttttttttatgaaagattaataaatgagattgaaatctaaaggtgattattgtgc 10044564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 131
Target Start/End: Original strand, 38016979 - 38017047
Alignment:
Q  63 ctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatt 131  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttggatt 38017047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 15972912 - 15972814
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctgg 183  Q
    ||||||||  || |||||||||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||||| |||||||||||| |||||||    
T  15972912 tcaagaaagattgaagaatgacatgacagaataatcacccttagattttatcaagaaattgttctgaatttaatgttagccaataaaatctaagcctgg 15972814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 38017047 - 38017137
Alignment:
Q  168 taaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggt 259  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  38017047 taaaatctcagcctggccggaaatcatggggtggtgggtgttatgtat-tttttttttgaaagattaataaatgagactgaaatctaaaggt 38017137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 153 - 269
Target Start/End: Original strand, 30055615 - 30055731
Alignment:
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||| ||||||||| |        ||||||| ||||||||||||||| ||||    
T  30055615 attaatgttagccaataaaatctcagc-tggccggaaatcatggggtggtggatgttatgtattttttttttatgaaaggttaataaatgagactaaaat 30055713  T
Q  252 ctaaaggtgtttattgtg 269  Q
    |||| |||| ||||||||    
T  30055714 ctaagggtgattattgtg 30055731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 37132723 - 37132651
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaccctta 127  Q
    ||||||||||||||||||| ||| ||||| ||||||||| || |||||||||||||||||||||||| |||||    
T  37132723 gagcaatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatcatcctta 37132651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 3890413 - 3890488
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 134  Q
    ||||||| |||||||||| |||||| ||||||||  ||||||||||| ||||||||||||||||| ||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatcaccattagatttta 3890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 24211267 - 24211221
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  24211267 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 24211221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 1503642 - 1503714
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 1503714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 17841649 - 17841721
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 17841721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 20091600 - 20091672
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||||||||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagattt 20091672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 26041912 - 26041984
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 26041984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 34665647 - 34665575
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||||||||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacccttagattt 34665575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 37132479 - 37132552
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| ||||||||  |||| |||||||||| || |||||||||||||||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatcacccttagattt 37132552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 40779928 - 40780000
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 40780000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 136
Target Start/End: Complemental strand, 3817965 - 3817914
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatc 136  Q
    ||||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  3817965 tcaagaaaaattcaagaattacatgacagaataatcacccttagattttatc 3817914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 6108032 - 6108104
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  6108032 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagattt 6108104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 10044614 - 10044542
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 10044542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 14129125 - 14129053
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacctttagattt 14129053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 30834862 - 30834927
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| ||||||||  || |||||||||||| |||||||| |||||||||||||    
T  30834862 atatcaagaatgattttatcaagaaagattaaagaatgacatgacagaataaccacccttagattt 30834927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 31347575 - 31347647
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||| ||||||||    
T  31347575 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatggcacaataatcacctttagattt 31347647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 37985855 - 37985927
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 37985927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 270
Target Start/End: Complemental strand, 1503732 - 1503692
Alignment:
Q  230 gattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  1503732 gattaataaatgagactgaaatctaaaggtgattattgtgc 1503692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 134
Target Start/End: Complemental strand, 35353300 - 35353233
Alignment:
Q  66 tatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 134  Q
    ||||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||| ||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaatttta 35353233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Complemental strand, 30055782 - 30055708
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 134  Q
    ||||||| |||| ||||| |||||| | ||||||  ||||||||||||||| || |||||||||||||||||||||    
T  30055782 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagatttta 30055708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 30055543 - 30055616
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttat 135  Q
    ||||||||||||||| |||| |||||||| |||| ||||||||||       ||||||||||||||||||||| |||||||    
T  30055543 gagcaatgctatataccaaggaagattttatcaaaaaaatttcaa-------atggcagaataatcacccttaaattttat 30055616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 269
Target Start/End: Complemental strand, 37132647 - 37132531
Alignment:
Q  149 tgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactga 248  Q
    |||||||||||||| ||||||||||||||| |||   ||||||||||||||    |||||||||| |         |||||| ||||||||| |||||||    
T  37132647 tgaaattaatgttagccaataaaatctcagtctgattggaaatcatggggt----ggtgttatgtttttttttttttgaaaggttaataaataagactga 37132552  T
Q  249 aatctaaaggtgtttattgtg 269  Q
    ||||||| |||| ||||||||    
T  37132551 aatctaagggtgattattgtg 37132531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 24211171 - 24211243
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||||||| |||||||||| ||||||||    
T  24211171 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 24211243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 25581038 - 25581110
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||  || |||||||||| ||||||||    
T  25581038 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacataacacaataatcacctttagattt 25581110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 32065012 - 32064940
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||||||| || |||||||||| ||||||||    
T  32065012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataatcacctttagattt 32064940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 42754841 - 42754913
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||| | |||||||||| ||||||||    
T  42754841 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggtacaataatcacctttagattt 42754913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 118
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataa 118  Q
    |||||||||| |||||| ||||||||  |||||||||||| |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 8454082 - 8454027
Alignment:
Q  77 agattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||||  ||||| | |||||||||||||||||| |||||||||| ||||||||    
T  8454082 agatttttataagaagaattcaagaatgacatggcacaataatcacctttagattt 8454027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 24844667 - 24844734
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 134  Q
    ||||||| || |||||| ||||||||  || ||||||| ||||||| ||||||||| |||||||||||    
T  24844667 atatcaataatgattttatcaagaaagatttaagaatggcatggcaaaataatcactcttagatttta 24844734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 132
Target Start/End: Original strand, 41819592 - 41819639
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||||  ||||||||||||||| || |||||||||||||||||||    
T  41819592 tcaagaaagattcaagaatgacatgacacaataatcacccttagattt 41819639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 270
Target Start/End: Complemental strand, 31347659 - 31347625
Alignment:
Q  236 taaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||||||||||||||| |||||||||    
T  31347659 taaatgagactgaaatctaaaggtgattattgtgc 31347625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 1645763 - 1645835
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||    |||||||||||||||| |||||||||| ||||||||    
T  1645763 aatgctagatatcaagaatgattttat-aagaaagaaccaagaatgacatggcacaataatcacctttagattt 1645835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 15187826 - 15187754
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||| ||| |||||||||| ||||||||    
T  15187826 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagattt 15187754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 232 - 269
Target Start/End: Complemental strand, 41819655 - 41819618
Alignment:
Q  232 ttaataaatgagactgaaatctaaaggtgtttattgtg 269  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  41819655 ttaataaatgagactgaaatctaagggtgattattgtg 41819618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 2e-95; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 3137480 - 3137263
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  3137480 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaa 3137381  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||    
T  3137380 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatc 3137281  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  3137280 taaaggtgattattgtgc 3137263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 2754716 - 2754935
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  2754716 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacctttagattttatcaagaaatagtcctgaaa 2754815  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta---tcnnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||   |        |||||||||||||||||||||||||||    
T  2754816 ttaatgttaaccaataaaatctcagcctgaccggaaatcatggggtagtgggtgttatgtattttttttttttatgaaagattaataaatgagactgaaa 2754915  T
Q  251 tctaaaggtgtttattgtgc 270  Q
    | |||||||| |||||||||    
T  2754916 tttaaaggtgattattgtgc 2754935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 55 - 257
Target Start/End: Original strand, 3456064 - 3456267
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||| |||    
T  3456064 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctggaat 3456163  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||||    
T  3456164 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 3456263  T
Q  254 aaag 257  Q
    ||||    
T  3456264 aaag 3456267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 6041884 - 6042093
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  6041884 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaat 6041983  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||| |||||| | |        |||||| ||||||||||||||||||||||||    
T  6041984 taatgttagccaataaaatctcagcctgaccggaaatcatggggtggtggttgttattttt------ttatgaaaaattaataaatgagactgaaatcta 6042077  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  6042078 aaggtgattattgtgc 6042093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 33113792 - 33114010
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33113792 agagcaatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 33113891  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||||  |        ||||||||||||||||||||| ||||||    
T  33113892 ttaatgttagccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaat 33113991  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||||||| |||||||||    
T  33113992 ctaaaggtgattattgtgc 33114010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 3574593 - 3574376
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctg-aa 152  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  3574593 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 3574494  T
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||    
T  3574493 attaatgttagccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaat 3574394  T
Q  252 ctaaaggtgtttattgtg 269  Q
    ||| ||||| ||||||||    
T  3574393 ctagaggtgattattgtg 3574376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 54 - 266
Target Start/End: Original strand, 37522052 - 37522265
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||| |||||||| || |||||    
T  37522052 agagcaatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatcaccctaagattttataaagaaatagtcatgaaa 37522151  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  37522152 ttaatgttaaccaataaaatctcaacctggccggaaattatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 37522251  T
Q  253 taaaggtgtttatt 266  Q
    |||||||| |||||    
T  37522252 taaaggtgattatt 37522265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 22426410 - 22426194
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| ||||||| |||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  22426410 agagcaatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 22426311  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| |||||||||| |||| ||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  22426310 ttaatgttagccaataaaatttcagtctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 22426211  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||| ||| |||||||||    
T  22426210 aaatgtgattattgtgc 22426194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 268
Target Start/End: Complemental strand, 37217118 - 37216904
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||    
T  37217118 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcatgaaat 37217019  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||||||||||||||||||||| || | ||||||| ||||| ||||||||||||| |        ||||||||||||||||||||||||||||||    
T  37217018 taatgttaaccaataaaatctcagccttgctgaaaatcatagggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 37216919  T
Q  254 aaaggtgtttattgt 268  Q
    ||||||| |||||||    
T  37216918 aaaggtgattattgt 37216904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 30385011 - 30385171
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  30385011 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatcacccttatattttatcaagaaatagtcctgaaat 30385110  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  30385111 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtat 30385171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 34482976 - 34482824
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||    
T  34482976 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatcacccttagattttatcaagaaatagtcctgaaa 34482877  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34482876 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggt 34482824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 48160905 - 48161121
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  48160905 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 48161004  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||| ||| |||||||||||||||||| |||||||| ||||||||| |||||||||||||  |        |||||| ||||||||||||||||||||||    
T  48161005 taatattagccaataaaatctcagcctagccggaaaccatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagactgaaatc 48161104  T
Q  253 taaaggtgtttattgtg 269  Q
    |||||||| ||||||||    
T  48161105 taaaggtgattattgtg 48161121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 55 - 269
Target Start/End: Complemental strand, 19650965 - 19650750
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctg-aaa 153  Q
    |||||||| ||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| | || || |||    
T  19650965 gagcaatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcaccattagattttatcaagaaacagtcttgaaaa 19650866  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| || ||||||||||||| |||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  19650865 ttaatgttagccgataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 19650766  T
Q  254 aaaggtgtttattgtg 269  Q
    ||||||| ||||||||    
T  19650765 aaaggtgattattgtg 19650750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 8320649 - 8320431
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||| |||||||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||| |||||||||||||||| || ||||||    
T  8320649 gagcaatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatcacccttaaattttatcaagaaatagtcttgaaat 8320550  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcat-ggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||| |||||||||||||||||||||| |||||||| |||||  |||||||||||||  |        ||||||||||||||||||||||||||||    
T  8320549 taatgttagccaataaaatctcagcctggccagaaatcatgggggtagtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaat 8320450  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||||||| |||||||||    
T  8320449 ctaaaggtgattattgtgc 8320431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 54 - 260
Target Start/End: Original strand, 11347267 - 11347475
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||    
T  11347267 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataataacccttagattttatcaggaaatagtcctgaaa 11347366  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||| |||||||||||||||  ||||  |||||||||||||| |||||||||||||  |        |||||| |||||||||||||| ||||||    
T  11347367 ttaatgttagccaataaaatctcagagtggctagaaatcatggggtggtgggtgttatgtatttttttttttatgaaaaattaataaatgagattgaaat 11347466  T
Q  252 ctaaaggtg 260  Q
    |||||||||    
T  11347467 ctaaaggtg 11347475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 42297352 - 42297514
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggc-agaataatcacccttagattttatcaagaaataatcctgaa 152  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||||||||| | ||||||||||||||||||||||||||||||||| | |||||    
T  42297352 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgactagaataatcacccttagattttatcaagaaatagttctgaa 42297451  T
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  42297452 attaatgttagccaataaaatctcagcctgaccggaaatcatggggtggtggatgttatgtat 42297514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 33145713 - 33145927
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| | || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  33145713 gagcaatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaat 33145811  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| ||||||||||||||||||| |||||||| ||| |||| |||||| |||||| |        ||||||| ||||||||| ||||||||||||    
T  33145812 taatgttagccaataaaatctcagcctgaccggaaattatgaggtggtgggtggtatgtattttttttttatgaaaggttaataaataagactgaaatct 33145911  T
Q  254 aaaggtgtttattgtg 269  Q
    || |||| ||||||||    
T  33145912 aagggtgattattgtg 33145927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 93 - 270
Target Start/End: Original strand, 3089455 - 3089635
Alignment:
Q  93 atttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatc 192  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||| ||||||||||||    
T  3089455 attttaagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaattaatgttagccaataaaatctcagcttggccggaaatc 3089554  T
Q  193 atggggtgatgggtgttatg---tatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||| |||||| ||||   |||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  3089555 atggggtggtgggtgctatgtattatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 3089635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 8362110 - 8361950
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||| |   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  8362110 gagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaat 8362011  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||| ||||||||||||| | | ||||||||||||||||||| ||||||| ||||||    
T  8362010 taatgttagccaataaaatctctgtcgggccggaaatcatggggtggtgggtgtcatgtat 8361950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 53 - 269
Target Start/End: Complemental strand, 36865094 - 36864883
Alignment:
Q  53 cagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaa 152  Q
    |||||||||||||||||| ||| |||||||| | |||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||| |||||||    
T  36865094 cagagcaatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatcacccttaggttttatcaaaaaatagtcctgaa 36864995  T
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||| |||||| |||||||    |||||||||||||||| || ||||||||||||||        ||||||  |||||||||||||||||||||    
T  36864994 attaatgttagccaatagaatctca----ggccggaaatcatgggatggtgggtgttatgtat-tttttatatgaaatgttaataaatgagactgaaatc 36864900  T
Q  253 taaaggtgtttattgtg 269  Q
    ||| |||| ||||||||    
T  36864899 taagggtgattattgtg 36864883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 56 - 215
Target Start/End: Complemental strand, 9797093 - 9796934
Alignment:
Q  56 agcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatt 155  Q
    ||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  | || |||||    
T  9797093 agcaatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtacttaaatt 9796994  T
Q  156 aatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||| ||||||||||||| | | ||||| ||||||||||||| ||||| ||||||||    
T  9796993 aatgttagccaataaaatctctgtcgggccgaaaatcatggggtggtgggtcttatgtat 9796934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 111 - 269
Target Start/End: Original strand, 42297920 - 42298077
Alignment:
Q  111 cagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgtta 210  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| | | |||||    
T  42297920 cagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagtctggccggaaatcatggggtggtagatgtta 42298019  T
Q  211 tgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtg 269  Q
    |||||        ||||||| |||||||||||||||||||||||| |||| ||||||||    
T  42298020 tgtat-tttttttatgaaaggttaataaatgagactgaaatctaagggtggttattgtg 42298077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 215
Target Start/End: Original strand, 47738117 - 47738265
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacca 166  Q
    ||||||||||||||||| ||||||||  ||||||||||| ||||||||||||| ||| ||||||||||| || ||||  ||||||||||||||||| |||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataattacctttagattttataaaaaaattgtcctgaaattaatgttagcca 47738216  T
Q  167 ataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||| || |||||||||||||| ||||||||||||||    
T  47738217 ataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgtat 47738265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 24343546 - 24343707
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||| |||||||||||| ||||||||| ||||| | | | |||||||||||||||| ||||||||||||||||||||  | | ||||    
T  24343546 agagcaatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatcactcttagattttatcaagaaattgttccgaaa 24343645  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| |||||||||||||| |||| ||| ||||||| ||||| ||||||||||||||    
T  24343646 ttaatgttagccaataaaatctcatcctgaccgaaaatcatcgggtggtgggtgttatgtat 24343707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 33839530 - 33839750
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| ||||||| |||||||||||| |||| |||| || |||||| ||||| ||||||||||||| |||||||||||||||||||  |  |||||    
T  33839530 agagcaatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatcaccattagattttatcaagaaattgttttgaaa 33839629  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-----tcnnnnnnnatgaaagattaataaatgagactga 248  Q
    ||||||||| ||||||||||||||  ||||||| ||||||||||||| | |||||||||||     ||       ||||||| |||||||||||||||||    
T  33839630 ttaatgttagccaataaaatctcaatctggccgtaaatcatggggtggtaggtgttatgtattttttctttttttatgaaaggttaataaatgagactga 33839729  T
Q  249 aatctaaaggtgtttattgtg 269  Q
    ||| ||| |||| ||||||||    
T  33839730 aatttaagggtgattattgtg 33839750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 41883258 - 41883128
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  ||| |||||||||||||  |||||||||||||| |||||    
T  41883258 tcaagaaaaattcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtcccgaaattaatgttagtcaataaaatctcagactggc 41883159  T
Q  185 cggaaatcatggggtgatgggtgttatgtat 215  Q
      |||||||||||||| ||||||||||||||    
T  41883158 tagaaatcatggggtggtgggtgttatgtat 41883128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 41224233 - 41224393
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||  ||||||| |||||||  |  ||||||    
T  41224233 gagcactgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaattatcacccttgaattttattaagaaattgtattgaaat 41224332  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||| | ||||||||||| |   || |||||||||||||||| ||||||||||||||    
T  41224333 taatgttagctaataaaatctctgttgggtcggaaatcatggggtggtgggtgttatgtat 41224393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 181
Target Start/End: Original strand, 42921154 - 42921269
Alignment:
Q  66 tatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacc 165  Q
    |||||||||||||||||| |||||||||||| |||||||||||| | |||| ||  || |||||||||||||||||||  ||||||| ||||||||| ||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatgaccgaatgattgcctttagattttatcaagaaattgtcctgaatttaatgttagcc 42921253  T
Q  166 aataaaatctcagcct 181  Q
    ||||||||||||||||    
T  42921254 aataaaatctcagcct 42921269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 40327897 - 40327985
Alignment:
Q  127 agattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  40327897 agattttatcaagaaattgtcctgaaattaatgttagccaataaaatctcaacctggccggaaatcatagggtggtgggtgttatgtat 40327985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 179 - 270
Target Start/End: Original strand, 30385525 - 30385616
Alignment:
Q  179 cctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||||||||    
T  30385525 cctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 30385616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 26612784 - 26612890
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||  |||||||||| ||||||||| | || |||| |||||||||||||||||||||||| ||   ||||||||||| || ||||| |||| |||    
T  26612784 agagcaatattatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataaccatttttagattttattaaaaaatagtccttaaa 26612883  T
Q  154 ttaatgt 160  Q
    |||||||    
T  26612884 ttaatgt 26612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 40328098 - 40328025
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| ||||||||  ||||||||||||||| || |||||||||||||||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagattt 40328025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 34482783 - 34482737
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  34482783 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 34482737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 3137213 - 3137285
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 3137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 34482687 - 34482759
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 34482759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 36864831 - 36864904
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| |||| |||  ||||||||||||||| || |||||||||||||||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatcacccttagattt 36864904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 47738370 - 47738305
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| ||||||||  |||||||||||||||||| |||||||| ||||||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatcatccttagattt 47738305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 64 - 132
Target Start/End: Complemental strand, 33839797 - 33839729
Alignment:
Q  64 tatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||||||||| |||||| ||||||||  ||||||||||||||| || |||||||||||||| ||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttaaattt 33839729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 8361838 - 8361910
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  ||||||||||||||| || |||||||||||||||||||    
T  8361838 aatgctagatatcaagaatgatttat-caagaaatattcaagaatgacatgacacaataatcacccttagattt 8361910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 30385666 - 30385594
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 30385594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 33114060 - 33113988
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 33113988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 33145978 - 33145906
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||||||||||||||    
T  33145978 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 33145906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 37522319 - 37522247
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatcacctttagattt 37522247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 41224500 - 41224428
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||||||| ||||    
T  41224500 aatgctagatatcaagaatgatttat-caagaaatattcaagaatgacatggcacaataatcacccttaaattt 41224428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 26612916 - 26612962
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||| |||||||||||||||||||||||| |||| |||||||||    
T  26612916 atgaaaggttaataaatgagactgaaatctaagggtgattattgtgc 26612962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 6042143 - 6042071
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||||||| |||||||||| ||||||||    
T  6042143 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 6042071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 8320381 - 8320453
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| ||||||| || |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  8320381 aatgctagatatcaataatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 8320453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 9796828 - 9796900
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  ||||||||||||||| || ||||||||| |||||||||    
T  9796828 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatgtcacaataatcactcttagattt 9796900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 22426144 - 22426216
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||  ||||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacatttagattt 22426216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 26613005 - 26612940
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| || |||||| | ||||||  ||||||||| |||||||| |||||||||||||||||||    
T  26613005 atatcaataatgattttattaagaaagattcaagaataacatggcacaataatcacccttagattt 26612940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 37216852 - 37216924
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||| | |||||||||| ||||||||    
T  37216852 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagattt 37216924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 42921392 - 42921319
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||| ||||| |||||| ||||||||  || ||||||||||||||| || ||||||||||| ||||    
T  42921392 aatgctagatattaagaatgattttatcaagaaatatttaagaatgacatggcacaacaatcacccttaaattt 42921319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 112 - 266
Target Start/End: Original strand, 46918959 - 46919106
Alignment:
Q  112 agaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttat 211  Q
    |||||||| ||| |||||||||||||||||||  ||  ||||||||||||| | |||||||| |     |||| ||||||||||||||| ||| ||||||    
T  46918959 agaataattacctttagattttatcaagaaattgtctcgaaattaatgttagcaaataaaatgt-----tggctggaaatcatggggtggtggatgttat 46919053  T
Q  212 gtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttatt 266  Q
     |||        |||| |||||||||||| |||| |||||||| ||||| |||||    
T  46919054 atat--atatttatgatagattaataaataagaccgaaatctagaggtgattatt 46919106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 46919153 - 46919088
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| |||| |||  ||||| |||||||||||||||||||||||  |||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatcacctctagattt 46919088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 92
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  58 caatgctatatatcaagaaagattttttcaagaaa 92  Q
    |||||||||||||||||||||||||| ||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 47738281 - 47738327
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||| |||||||||||||||||||||||| | || |||||||||    
T  47738281 atgaaaggttaataaatgagactgaaatctaaggatgattattgtgc 47738327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 3089685 - 3089613
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |  ||||||||||||||| |||||||||| ||||||||    
T  3089685 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagattt 3089613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 19650699 - 19650771
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | ||||||||||||| || |||||||||| ||||||||    
T  19650699 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgacacaataatcacctttagattt 19650771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 24343808 - 24343743
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| |||| |||  |||||||||||||||  |  ||||||||||||||||||    
T  24343808 atatcaagaatgattttatcaaaaaagattcaagaatgacatgatatgataatcacccttagattt 24343743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 83
Target Start/End: Complemental strand, 47402662 - 47402633
Alignment:
Q  54 agagcaatgctatatatcaagaaagatttt 83  Q
    ||||||||||||||||||||||||||||||    
T  47402662 agagcaatgctatatatcaagaaagatttt 47402633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 173; Significance: 4e-93; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 4892201 - 4892418
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4892201 agagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 4892300  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  4892301 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttcttttaatgaaagattaataaatgagactgaaatc 4892400  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  4892401 taaaggtgattattgtgc 4892418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 25398238 - 25398454
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  25398238 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 25398337  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  25398338 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 25398437  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  25398438 aaaggtgattattgtgc 25398454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 33584394 - 33584178
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  33584394 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaat 33584295  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  33584294 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 33584195  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  33584194 aaaggtgattattgtgc 33584178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 6043577 - 6043361
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||    
T  6043577 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatcacccttagattttatcaagaaatagtgctgaaa 6043478  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  6043477 ttaatattaaccaataaaatctcagcctggccggaaatcatggggtgttgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 6043378  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  6043377 aaaggtgattattgtgc 6043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 3362777 - 3362994
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  3362777 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaa 3362876  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc--nnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||||    
T  3362877 ttaatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaat 3362976  T
Q  252 ctaaaggtgtttattgtg 269  Q
    ||||||||| ||||||||    
T  3362977 ctaaaggtggttattgtg 3362994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 3522071 - 3521856
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||||||    
T  3522071 gagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatcaccattagattttatcaagaaatagttctgaaat 3521972  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    ||||||||||||||||||||| ||  |||||||||||||||||||| |||||||||||||||       |||||||||||||||||||||||||||||||    
T  3521971 taatgttaaccaataaaatcttagtttggccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatcta 3521872  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  3521871 aaggtgattattgtgc 3521856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 4434072 - 4433857
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  4434072 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagttctgaaat 4433973  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||        ||||||||||||||||| |||||||||||||    
T  4433972 taatgttaaccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgtatttttttttatgaaagattaataaataagactgaaatcta 4433873  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  4433872 aaggtgattattgtgc 4433857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 12850801 - 12851018
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  12850801 gagcaatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 12850900  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |        |||||||||||||||||||||||||||||    
T  12850901 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaatc 12851000  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  12851001 taaaggtggttattgtgc 12851018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 38899792 - 38899575
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  38899792 agagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaa 38899693  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| ||||        |||||||||||||||||||||||||||||    
T  38899692 ttaatgttaaccaataaaatctcagtctggccgaaaatcatggggtggtgggtgttatatatcttttttttatgaaagattaataaatgagactgaaatc 38899593  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  38899592 taaaggtggttattgtgc 38899575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 11361196 - 11360980
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11361196 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 11361097  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||| ||| ||||||||    
T  11361096 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttgtatgaaagattaataaattagattgaaatct 11360997  T
Q  254 aaaggtgtttattgtgc 270  Q
    |||| || |||||||||    
T  11360996 aaagatgattattgtgc 11360980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 14138667 - 14138883
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  14138667 agagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatcacccttaaattttatcaagaaatagtcctgaaa 14138766  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| |||||||||||||||||||  |||||||||||||||| ||||||||||||||        ||||||||||||||||||||| ||||||||    
T  14138767 ttaatgttagccaataaaatctcagcctgatcggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatct 14138866  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  14138867 aaaggtgattattgtgc 14138883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 8145374 - 8145589
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  8145374 agaggaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 8145473  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
     |||||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  8145474 ctaatgttagccaataaaatctcagcctggtcggaaatcat-gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 8145572  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  8145573 aaaggtgattattgtgc 8145589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 2477635 - 2477852
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  2477635 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 2477734  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||| |||||||||||    
T  2477735 ttaatgttagtcaataaaatttcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatc 2477834  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| | |||||||    
T  2477835 taaaggtgatcattgtgc 2477852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 37321859 - 37321642
Alignment:
Q  55 gagcaatgctatatatc-aagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||| || |||||    
T  37321859 gagcaatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttaaattttatcaataaatagtcttgaaa 37321760  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||| ||||||||||||||| || |||||||||||||||||| ||||||||||||| |        |||||||||||||||||||||||||||||    
T  37321759 ttaatgttagccaataaaatctcagtctagccggaaatcatggggtggtgggtgttatgtattttttatttatgaaagattaataaatgagactgaaatc 37321660  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  37321659 taaaggtgattattgtgc 37321642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 22913119 - 22912906
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | |||||||    
T  22913119 gagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaat 22913020  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| ||||||||||||| | | |||| |||||||||||||| ||| ||||||||||        |||| |||  |||||||||||||||||||||    
T  22913019 taatgttagccaataaaatctctgtcgggccagaaatcatggggtggtggatgttatgtatttttttttatgagaga--aataaatgagactgaaatcta 22912922  T
Q  255 aaggtgtttattgtgc 270  Q
    | |||| |||||||||    
T  22912921 agggtgattattgtgc 22912906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 211
Target Start/End: Complemental strand, 17545750 - 17545594
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||    
T  17545750 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaat 17545651  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttat 211  Q
    ||||||||  |||||||||||| | | ||||||||||||||||||| ||||||||||    
T  17545650 taatgttagtcaataaaatctctgtcgggccggaaatcatggggtggtgggtgttat 17545594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 31640975 - 31640845
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    ||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||  || |||||||||||||| |||||||||||||||||||||    
T  31640975 tcaagaaagattcaagaatgacatggcagaataaccacccttagattttatcaagaaattgtcatgaaattaatgttagccaataaaatctcagcctggc 31640876  T
Q  185 cggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||| ||||||||||||||    
T  31640875 cggaaatcatggggtggtgggtgttatgtat 31640845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 55 - 182
Target Start/End: Complemental strand, 12614798 - 12614671
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||| ||||| ||||||||  ||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||    
T  12614798 gagcaatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatcacccttagattttatcaagaaattgtcctgaaat 12614699  T
Q  155 taatgttaaccaataaaatctcagcctg 182  Q
    |||||||| |||||||||||||||||||    
T  12614698 taatgttagccaataaaatctcagcctg 12614671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 59 - 215
Target Start/End: Original strand, 27481830 - 27481982
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaat 158  Q
    |||||||| ||| |||||||||||| ||||||||| ||||||||||||||||   |||||||||  |||| |||||| |||||||  ||  |||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg---aataatcacatttag-ttttatgaagaaattgtcacgaaattaat 27481925  T
Q  159 gttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||| |||||||||| ||| ||| | |||||||||||||||| ||||||||||||||    
T  27481926 gttagccaataaaatttcatcctagtcggaaatcatggggtggtgggtgttatgtat 27481982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 4892468 - 4892396
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 4892396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 22912856 - 22912928
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||||||||||||    
T  22912856 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatggcacaataatcacccttagattt 22912928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 33584128 - 33584200
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 33584200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 10458409 - 10458465
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacc 123  Q
    ||||||||||| ||||| ||||||||| |||||||||||||||||| ||||||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatcacc 10458465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 224 - 270
Target Start/End: Complemental strand, 12614633 - 12614587
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  12614633 atgaaaggttaataaatgagactgaaatctaaaggtgattattgtgc 12614587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 3521806 - 3521878
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 3521878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 6043311 - 6043383
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 6043383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 8145639 - 8145567
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 8145567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 12851068 - 12850996
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| ||||| |||| ||||||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagattt 12850996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 25398504 - 25398432
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||| |||||||||||| |||||||||| ||||||||    
T  25398504 aatgctagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatcacctttagattt 25398432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 146 - 215
Target Start/End: Complemental strand, 36880297 - 36880228
Alignment:
Q  146 tcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||||||||||| |||||||||| |||| |||| ||||||| ||||| || ||| ||||||||||    
T  36880297 tcctgaaattaatgttagccaataaaatttcagtctggtcggaaattatgggatggtggatgttatgtat 36880228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 38899524 - 38899597
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | || |||| |||||||||||||||||| ||||| |||| ||||||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataaccacctttagattt 38899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 12614536 - 12614609
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||| | |||||| |||| |||  || ||||||||||||||| |||||||||| ||||||||    
T  12614536 aatgctagatatcaagtatgattttatcaaaaaagatttaagaatgacatggcacaataatcacctttagattt 12614609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 14138933 - 14138861
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||| ||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  14138933 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 14138861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 37321592 - 37321664
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||| |||||| |||||||||| ||||||||    
T  37321592 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgaaatggcacaataatcacctttagattt 37321664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 3363045 - 3362973
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||||||| || ||||| |||| ||||||||    
T  3363045 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataaccacctttagattt 3362973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 13664790 - 13664753
Alignment:
Q  95 ttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||||||||  |||||||||||||||||||||    
T  13664790 ttcaagaatgacatgatagaataatcacccttagattt 13664753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 72 - 133
Target Start/End: Complemental strand, 27482077 - 27482016
Alignment:
Q  72 aagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttt 133  Q
    ||||| |||||| |||| |||  ||||||||||||||  ||||||||||||| |||||||||    
T  27482077 aagaatgattttatcaaaaaagattcaagaatgacataacagaataatcacctttagatttt 27482016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 4e-93; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 23268128 - 23267911
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23268128 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 23268029  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  23268028 ttaatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 23267929  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  23267928 taaaggtgattattgtgc 23267911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 33380207 - 33380423
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  33380207 gagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatcacccttagattttatcaagaaatagtcctgaaat 33380306  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  33380307 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatctttttttaatgaaagattaataaatgagactgaaatct 33380406  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  33380407 aaaggtgattattgtgc 33380423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 54 - 266
Target Start/End: Complemental strand, 7475574 - 7475361
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  7475574 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatcacccttagattttatcaagaaatagtcctgaaa 7475475  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  7475474 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 7475375  T
Q  253 taaaggtgtttatt 266  Q
    |||||||| |||||    
T  7475374 taaaggtgattatt 7475361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 35160756 - 35160975
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35160756 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 35160855  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc---nnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||          |||||||||||||||||||||||||||    
T  35160856 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttttatgaaagattaataaatgagactgaaa 35160955  T
Q  251 tctaaaggtgtttattgtgc 270  Q
    |||||||||| |||||||||    
T  35160956 tctaaaggtgattattgtgc 35160975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 56 - 269
Target Start/End: Original strand, 10661888 - 10662103
Alignment:
Q  56 agcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatt 155  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  10661888 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaatt 10661987  T
Q  156 aatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc--nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||         ||||||||||||||||||||||||||||||    
T  10661988 aatgttaaccaataaaatctcagcctggccggaaatcatagggtggtgggtgttatgtatctttttttttatgaaagattaataaatgagactgaaatct 10662087  T
Q  254 aaaggtgtttattgtg 269  Q
    ||||||| ||||||||    
T  10662088 aaaggtgattattgtg 10662103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 9293642 - 9293425
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  9293642 agagcaatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaa 9293543  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||  |        ||||||||||||||||||||||||||||    
T  9293542 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaat 9293443  T
Q  252 ctaaaggtgtttattgtg 269  Q
    |||| |||| ||||||||    
T  9293442 ctaagggtgattattgtg 9293425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 58 - 269
Target Start/End: Complemental strand, 31174896 - 31174685
Alignment:
Q  58 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaa 157  Q
    ||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31174896 caatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaa 31174797  T
Q  158 tgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaag 257  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||| ||||||||||||||        ||||||||||||||||||||| ||||||||||||    
T  31174796 tgttagccaataaaatctcagtctgaccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagattgaaatctaaag 31174697  T
Q  258 gtgtttattgtg 269  Q
    | ||||||||||    
T  31174696 gagtttattgtg 31174685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 21936081 - 21936298
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||    
T  21936081 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 21936180  T
Q  155 taatgttaaccaataaaatctc-agcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||| |||||||||    
T  21936181 taatgttagccaataaaatctctagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgaaactgaaatc 21936280  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  21936281 taaaggtgattattgtgc 21936298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 13354845 - 13355064
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| || |||||    
T  13354845 agagcaatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataattacccttagattttatcaagaaatagtcttgaaa 13354944  T
Q  154 ttaatgttaaccaataaaatctc-agcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    ||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||||||  |        |||||||||||||||||||||||||||    
T  13354945 ttaatgttagccaataaaatctctagcctggccggaaatcatggagtggtgggtgttatgtatttttttttttatgaaagattaataaatgagactgaaa 13355044  T
Q  251 tctaaaggtgtttattgtgc 270  Q
    |||||| ||| |||||||||    
T  13355045 tctaaaagtgattattgtgc 13355064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 85 - 269
Target Start/End: Original strand, 3989106 - 3989291
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||| |||||    
T  3989106 tcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaattaatgttagccaataaaatctcagtctggc 3989205  T
Q  185 cggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtg 269  Q
    |||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||||||||||  ||||||||    
T  3989206 cggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatctaaaggttattattgtg 3989291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 14941432 - 14941272
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  14941432 agagcaatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaa 14941333  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||| |||||||||||||||| ||||||||| |||| ||||||||||||||    
T  14941332 ttaatgttagccaat-aaatctcagcctggccagaaatcatgaggtggtgggtgttatgtat 14941272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 43330911 - 43331072
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||    
T  43330911 agagcaatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgaaa 43331010  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| |||||||||| || | | ||||||||||||||||||| ||||||||||||||    
T  43331011 ttaatgttagccaataaaatttctgtcgggccggaaatcatggggtggtgggtgttatgtat 43331072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 57 - 215
Target Start/End: Complemental strand, 21393751 - 21393593
Alignment:
Q  57 gcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatta 156  Q
    ||||||||||||||||||||| ||||| ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||  | |||||||||    
T  21393751 gcaatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatcacccttagattttatcaagaaattgtactgaaatta 21393652  T
Q  157 atgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||||||  | | ||||||||||||||||||| ||||||||||||||    
T  21393651 atgttaaccaataaaatctatgtcgggccggaaatcatggggtggtgggtgttatgtat 21393593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 54 - 216
Target Start/End: Original strand, 27847631 - 27847793
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||| ||||| |||||||||||| | ||||||  ||||||||||||||| ||||||||||||| |||||||||||||| ||||  ||||||||    
T  27847631 agagcaatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatcaccgttagattttatcaaaaaattgtcctgaaa 27847730  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc 216  Q
    |||||||||  |||||||||||||||||| || |||||||||||||| |||||||||||||||    
T  27847731 ttaatgttagtcaataaaatctcagcctgaccagaaatcatggggtggtgggtgttatgtatc 27847793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 9723405 - 9723565
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||||||| |||||||||||| | ||||||  || |||||||||||| ||||||||||||||||| |||||||||||||||  ||| |||||    
T  9723405 gagcaatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccgaaat 9723504  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||| | ||||||||||||||||  ||||||||||||||||| ||||||||||||||    
T  9723505 taatgttagctaataaaatctcagcctcaccggaaatcatggggtggtgggtgttatgtat 9723565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 67 - 212
Target Start/End: Original strand, 22591494 - 22591639
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacca 166  Q
    ||||||||||||||||| | || |||| ||||||||||| |||||||||||||| |||||| ||||||| |||||||  ||||||||||||||||| |||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatcccccttaaattttattaagaaattgtcctgaaattaatgttagcca 22591593  T
Q  167 ataaaatctcagcctggccggaaatcatggggtgatgggtgttatg 212  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||    
T  22591594 ataaaatctcagcctagcaggaaatcatggggtggtgggtattatg 22591639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 16767527 - 16767377
Alignment:
Q  65 atatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaac 164  Q
    ||||||||||| ||||||| | || ||||  | |||||| | | || ||||||||||| |||| ||||||||||||||| |||||||||||||||||| |    
T  16767527 atatatcaagagagattttataaaaaaaaaattaagaataatacggtagaataatcactcttaaattttatcaagaaattatcctgaaattaatgttagc 16767428  T
Q  165 caataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  16767427 caataaaatctcagtctggccggaaatcatagggtggtgggtgttatgtat 16767377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 215
Target Start/End: Complemental strand, 40262729 - 40262641
Alignment:
Q  127 agattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||||  ||| ||||||||| ||| |||||||||||||| |||| |||||||| |||||||| ||||||||||||||    
T  40262729 agattttatcaagaaattgtcccgaaattaatattagccaataaaatctcaccctgaccggaaattatggggtggtgggtgttatgtat 40262641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 22592979 - 22592905
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttt 133  Q
    ||||||| |||||||||| |||||| ||||||||  ||||||||||||||| || ||||||||||||||||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatcacccttagatttt 22592905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 33380473 - 33380401
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 33380401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 35161025 - 35160953
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 35160953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 95 - 171
Target Start/End: Original strand, 37335753 - 37335829
Alignment:
Q  95 ttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaa 171  Q
    ||||||||||||||||||||||||||||  ||||||| |||||| ||||  | |||| |||||||||| ||||||||    
T  37335753 ttcaagaatgacatggcagaataatcacttttagattgtatcaaaaaattgttctgatattaatgttagccaataaa 37335829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 9293374 - 9293446
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||||||||||||||    
T  9293374 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 9293446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 10662154 - 10662082
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  10662154 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagattt 10662082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 23267861 - 23267933
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 23267933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 132
Target Start/End: Original strand, 34320990 - 34321028
Alignment:
Q  94 tttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  34320990 tttcaagaatgacatggcacaataatcacccttagattt 34321028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 7475307 - 7475379
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| ||| || |||||||||| ||||||||    
T  7475307 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacataataatcacctttagattt 7475379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 9723665 - 9723600
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||  ||||||||  || |||||||||||| ||||||||||||| ||||||||    
T  9723665 atatcaagaatgatttgatcaagaaatatttaagaatgacatgacagaataatcacctttagattt 9723600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 21393485 - 21393556
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||||| ||||||||||||| || |||||||||||||| ||||    
T  21393485 aatgctagatatcaagaatgatttat-caagaaaatt-caagaatgacatgacacaataatcacccttaaattt 21393556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 43331178 - 43331106
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||| | |||||||||| ||||||||    
T  43331178 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatggtacaataatcacctttagattt 43331106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 234 - 268
Target Start/End: Original strand, 43331092 - 43331126
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgt 268  Q
    ||||||||||||||||||||||||||| |||||||    
T  43331092 aataaatgagactgaaatctaaaggtgattattgt 43331126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 13355114 - 13355042
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||||||| |||||||||  ||||||||    
T  13355114 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacttttagattt 13355042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 269
Target Start/End: Complemental strand, 16767357 - 16767312
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtg 269  Q
    ||||||| ||||||||||||||||||||||||  ||| ||||||||    
T  16767357 atgaaaggttaataaatgagactgaaatctaagagtgattattgtg 16767312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 34321042 - 34321006
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| |||| |||||||||    
T  34321042 aataaatgagactgaaatctaagggtgattattgtgc 34321006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 173; Significance: 4e-93; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 19015403 - 19015620
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  19015403 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 19015502  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  19015503 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatc 19015602  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  19015603 taaaggtgattattgtgc 19015620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 36966773 - 36966557
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  36966773 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 36966674  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  36966673 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 36966574  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  36966573 aaaggtgattattgtgc 36966557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 55 - 269
Target Start/End: Complemental strand, 37821899 - 37821684
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  37821899 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 37821800  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  37821799 taatgttaaccaataaaatctcagcctggccgaaaatcatggggtgttgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 37821700  T
Q  254 aaaggtgtttattgtg 269  Q
    ||||||| ||||||||    
T  37821699 aaaggtgattattgtg 37821684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 55 - 269
Target Start/End: Original strand, 44094698 - 44094912
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44094698 gagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 44094797  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  44094798 taatgttagccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatttttctttatgaaagattaataaatgagactgaaatcta 44094897  T
Q  255 aaggtgtttattgtg 269  Q
    |||||| ||||||||    
T  44094898 aaggtgattattgtg 44094912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 55 - 260
Target Start/End: Original strand, 6883487 - 6883693
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6883487 gagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 6883586  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  6883587 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 6883686  T
Q  254 aaaggtg 260  Q
    |||||||    
T  6883687 aaaggtg 6883693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 41876508 - 41876291
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  41876508 agagcaatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatcacccttaggttttatcaagaaatagtcctgaaa 41876409  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  41876408 ttaatgttaaccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 41876309  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  41876308 taaaggtgattattgtgc 41876291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 40214988 - 40215204
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  40214988 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 40215087  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |        |||||| |||||||||||||||||||||||    
T  40215088 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagactgaaatct 40215187  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  40215188 aaaggtgattattgtgc 40215204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 25463675 - 25463892
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  25463675 agagcaatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 25463774  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||| |||||    
T  25463775 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagacttaaatc 25463874  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  25463875 taaaggtgattattgtgc 25463892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 9910358 - 9910140
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||    
T  9910358 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcaaccttagattttatcaagaaatagtcctgaaat 9910259  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc---nnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||| |||          ||||||||||||||||| || |||||||    
T  9910258 taatgttaaccaataaaatctcagtatggccggaaatcatggggtggtgggtgttatgcatcttttttttttatgaaagattaataaataagtctgaaat 9910159  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||||||| |||||||||    
T  9910158 ctaaaggtgattattgtgc 9910140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 58 - 269
Target Start/End: Original strand, 3559620 - 3559832
Alignment:
Q  58 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaa 157  Q
    |||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||    
T  3559620 caatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaattaa 3559719  T
Q  158 tgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgtt-atgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaa 256  Q
    ||||| |||||||||||||||||||| |||||||||||||||| |||||||| ||||||        |||||||||||||||||||||||||||| ||||    
T  3559720 tgttagccaataaaatctcagcctgggcggaaatcatggggtggtgggtgttaatgtatttttttttatgaaagattaataaatgagactgaaatataaa 3559819  T
Q  257 ggtgtttattgtg 269  Q
    |||| ||||||||    
T  3559820 ggtgattattgtg 3559832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 51737510 - 51737721
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||     ||||||||||||| |||||||| | ||||||||||||||||||| |||||||||||||||| |||||||||    
T  51737510 gagcaatgctatatatcaagaaag-----ttcaagaaaattttaagaatgataaggcagaataatcacccttaaattttatcaagaaatagtcctgaaat 51737604  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  51737605 taatgttaaccaataaaatctcagcctgaccgaaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 51737704  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  51737705 aaaggtgattattgtgc 51737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 25973413 - 25973622
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  25973413 agagcaatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatcacccttagattttatcaagaaataatcctgaaa 25973511  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| ||||||||||||    ||||||| ||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||| |    
T  25973512 ttaatgttagccaataaaatct----ctggccgaaaatcatggggtggtgggtgttatgtat-tttttttatgaaagattaataaatgagactgaaattt 25973606  T
Q  254 aaaggtgtttattgtg 269  Q
    ||||||| ||||||||    
T  25973607 aaaggtgattattgtg 25973622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 18404441 - 18404664
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||    
T  18404441 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatcacctttagattttatcaagaaatagtcctgaaa 18404540  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatg-------tatcnnnnnnnatgaaagattaataaatgagact 246  Q
    ||||||||| |||||||||||||||  ||| |||||||||| ||||| |||||||||||       |||        |||||||||||||||||||||||    
T  18404541 ttaatgttagccaataaaatctcagtttggtcggaaatcatagggtggtgggtgttatgtattttttattttattttatgaaagattaataaatgagact 18404640  T
Q  247 gaaatctaaaggtgtttattgtgc 270  Q
    |||||||||| ||| |||||||||    
T  18404641 gaaatctaaatgtgattattgtgc 18404664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 40273701 - 40273862
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||||||| |||||||  | ||||||    
T  40273701 agagcaatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatcacccttagattttattaagaaattgtactgaaa 40273800  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||||||||||| | | ||||||||||||||||||| ||||||||||||||    
T  40273801 ttaatgttagccaataaaatctctgtcgggccggaaatcatggggtggtgggtgttatgtat 40273862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 27523323 - 27523160
Alignment:
Q  54 agagcaatgctatata--tcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctga 151  Q
    ||||||||||||||||  |||||||  ||||| ||||||||| || |||||||||||| ||||||||||||||||| |||||||||||||||  ||| ||    
T  27523323 agagcaatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatcacccttaaattttatcaagaaattgtcccga 27523224  T
Q  152 aattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  27523223 aattaatgttagccaataaaatctcatcctggccggaaatcatggggtgatgggtgttatgtat 27523160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 32000332 - 32000172
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||  | |||||||    
T  32000332 gagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataaccacccttagattttatcaagaaattgtactgaaat 32000233  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||| ||||||||||||  | |  |||||||||||||||||| ||||||||||||||    
T  32000232 taatgttagccaataaaatctatgtcgagccggaaatcatggggtggtgggtgttatgtat 32000172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 16045864 - 16045746
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  16045864 agagtaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatattcttgaaa 16045765  T
Q  154 ttaatgttaaccaataaaa 172  Q
    ||||||||| |||||||||    
T  16045764 ttaatgttagccaataaaa 16045746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 55 - 215
Target Start/End: Complemental strand, 44691094 - 44690934
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||| | |||||||||||||||||| | || |||  ||||||||| ||||||||||||||| || |||||||||||||||||||| ||||  ||||    
T  44691094 gagcaatgttgtatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataataactcttagattttatcaagaaattatcccaaaat 44690995  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  44690994 taatgttagccaataaaatctcagtctggccggaaatcatggggtgttgggtgttatgtat 44690934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 59 - 212
Target Start/End: Complemental strand, 33786695 - 33786543
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaat 158  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||||||| |||||||||||||||  | |||||||||||    
T  33786695 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatggcacaataatcacccttaaattttatcaagaaattgtactgaaattaat 33786597  T
Q  159 gttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatg 212  Q
    |||| ||||||||||||| | | ||||||||||||||||||| ||| |||||||    
T  33786596 gttagccaataaaatctctgtcgggccggaaatcatggggtggtggatgttatg 33786543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 128 - 270
Target Start/End: Complemental strand, 20305123 - 20304979
Alignment:
Q  128 gattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnat 225  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||| || |||||||||||||  |        ||    
T  20305123 gattttatcaagaaataatcctgaaattaatgttagccaataaaatctcagcttggccgaaaatcatgggatggtgggtgttatgtatttttttttttat 20305024  T
Q  226 gaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||| |||||||||||||||||||||||||| |||||||||    
T  20305023 gaaagattgataaatgagactgaaatctaaaggtgattattgtgc 20304979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 34519757 - 34519874
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| | ||||||  ||||| |||| ||| | |||||||||  |||||||||||||||| ||||  ||||||||    
T  34519757 agagcaatgctatatatcaagaaagattttattaagaaagattcaaaaatgccatagaagaataatcgaccttagattttatcaaaaaattgtcctgaaa 34519856  T
Q  154 ttaatgttaaccaataaa 171  Q
    ||||||||| ||||||||    
T  34519857 ttaatgttagccaataaa 34519874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 215
Target Start/End: Original strand, 52329345 - 52329428
Alignment:
Q  131 tttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||| | | | |||||||||||||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||    
T  52329345 tttatcaagaaagagttccgaaattaatgttaaccaataaaatctcagcctggccagaaatcat-gggtggtaggtgttatgtat 52329428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 85 - 268
Target Start/End: Original strand, 10167430 - 10167613
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    ||||||||  || ||||||||||||  ||||||||||   |||||||||||||| ||||  || | |||||||||||| |||||||||| |  | ||| |    
T  10167430 tcaagaaagatttaagaatgacatgatagaataatcatttttagattttatcaaaaaattgtctttaaattaatgttagccaataaaattttggtctgac 10167529  T
Q  185 cggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgt 268  Q
    ||||||| ||||  || || ||||| |||||        |||||| |||||||||| ||||||||||||||||||| |||||||    
T  10167530 cggaaattatggtttggtgtgtgttgtgtatttttttttatgaaaaattaataaataagactgaaatctaaaggtgattattgt 10167613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 67 - 131
Target Start/End: Original strand, 44690828 - 44690892
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatt 131  Q
    ||||||| || |||||| ||||||||  |||||||||||||||||||||||||||||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatcacccttagatt 44690892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 19015670 - 19015598
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 19015598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 32000065 - 32000137
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||||||||||||    
T  32000065 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatggcacaataatcacccttagattt 32000137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 33786430 - 33786502
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||||||||||||    
T  33786430 aatgctagatatcaagaatgatttat-caagaaagattcaagaatgacatggcacaataatcacccttagattt 33786502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 40273974 - 40273902
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  |||||||||||||||||| |||||||||||||||||||    
T  40273974 aatgctagatatcaagaatgatttat-caagaaatattcaagaatgacatggcacaataatcacccttagattt 40273902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 51737771 - 51737699
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 51737699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 6883753 - 6883681
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||| ||||| ||||||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataatattcacctttagattt 6883681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 9910098 - 9910162
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 9910162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 20304929 - 20305001
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 20305001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 37821633 - 37821705
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||    
T  37821633 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttagattt 37821705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 40215254 - 40215182
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 40215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 41876241 - 41876313
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||| ||| |||||||||| ||||||||    
T  41876241 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatagcacaataatcacctttagattt 41876313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 52064376 - 52064445
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttag 128  Q
    ||||||| ||||||| || |||||| ||||||||  ||||||||||||||| ||||||| ||||||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaatattcacccttag 52064445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 134
Target Start/End: Original strand, 27523054 - 27523129
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 134  Q
    |||| ||||||||||||| |||||| ||||||||  |||||||||   |||||||| ||||||||||| |||||||    
T  27523054 aatgttatatatcaagaatgattttatcaagaaagattcaagaatcgtatggcagattaatcaccctttgatttta 27523129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 51621002 - 51621086
Alignment:
Q  127 agattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| |||||||| ||| |||||||||||||  |||||||||||||    |  |||||||||||||||| ||| ||||||||||    
T  51621002 agattttattaagaaatagtccagaaattaatgttagtcaataaaatctca----gatcggaaatcatggggtggtggatgttatgtat 51621086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 25463942 - 25463870
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||||||| |||||||||| ||||||||    
T  25463942 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 25463870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 25973673 - 25973601
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||||| ||| ||||    
T  25973673 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataatcacctttaaattt 25973601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Complemental strand, 52329506 - 52329469
Alignment:
Q  95 ttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||||||| |||||||||||||||||||||||    
T  52329506 ttcaagaatgacatagcagaataatcacccttagattt 52329469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 92
Target Start/End: Original strand, 51620979 - 51621017
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaa 92  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  51620979 agagcaatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 18404714 - 18404642
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||  ||||||||    
T  18404714 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacatttagattt 18404642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 19722906 - 19722970
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||||| ||||||||    
T  19722906 atatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacctttagattt 19722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 82
Target Start/End: Complemental strand, 9389303 - 9389275
Alignment:
Q  54 agagcaatgctatatatcaagaaagattt 82  Q
    |||||||||||||||||||||||||||||    
T  9389303 agagcaatgctatatatcaagaaagattt 9389275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 32000151 - 32000115
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| |||| |||||||||    
T  32000151 aataaatgagactgaaatctaagggtgattattgtgc 32000115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 33786516 - 33786480
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| |||| |||||||||    
T  33786516 aataaatgagactgaaatctaagggtgattattgtgc 33786480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Original strand, 40273888 - 40273924
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| |||| |||||||||    
T  40273888 aataaatgagactgaaatctaagggtgattattgtgc 40273924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 171; Significance: 7e-92; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 54 - 268
Target Start/End: Original strand, 47290065 - 47290280
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  47290065 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 47290164  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||| ||||||||||||||||||||    
T  47290165 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagaataataaatgagactgaaatc 47290264  T
Q  253 taaaggtgtttattgt 268  Q
    |||||||| |||||||    
T  47290265 taaaggtgattattgt 47290280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 31078885 - 31078668
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  31078885 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 31078786  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||| |||||||    
T  31078785 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcttttttttatgaaagattaataaatgagattgaaatc 31078686  T
Q  253 taaaggtgtttattgtgc 270  Q
    ||||| || |||||||||    
T  31078685 taaagatgattattgtgc 31078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 36073349 - 36073565
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  36073349 agaggaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatattcatgaaa 36073448  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||       ||||||||||||||||||||||||||||||    
T  36073449 ttaatgttaaccaataaaatctcagcctgaccggaaatcatggggtggtgggtgttatgtatctttttttatgaaagattaataaatgagactgaaatct 36073548  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  36073549 aaaggtgattattgtgc 36073565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 50 - 270
Target Start/End: Original strand, 53123025 - 53123247
Alignment:
Q  50 tgccagagcaatgctatatatcaagaaagattttttcaa-gaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcc 148  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  53123025 tgccagagcaatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcc 53123124  T
Q  149 tgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactg 247  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||    
T  53123125 tgaaattaatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactg 53123224  T
Q  248 aaatctaaaggtgtttattgtgc 270  Q
    |||||||||| || |||||||||    
T  53123225 aaatctaaagatgattattgtgc 53123247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 44893425 - 44893642
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  44893425 agagcaatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 44893524  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||        |||||||||||||||||||||||||||||    
T  44893525 ttaatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 44893624  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  44893625 taaaggtgattattgtgc 44893642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 24128238 - 24128454
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  24128238 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaa 24128337  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||        |||||||||||||||||||||||||||||    
T  24128338 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 24128437  T
Q  253 taaaggtgtttattgtg 269  Q
    |||||||  ||||||||    
T  24128438 taaaggtaattattgtg 24128454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 46441844 - 46442060
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  46441844 gagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatcacccttagattttatcaagaaatagtcctgaaat 46441943  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||||||||||||||    
T  46441944 taatgttaaccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatct 46442043  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  46442044 aaaggtgattattgtgc 46442060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 49387953 - 49387736
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49387953 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 49387854  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc--nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||         |||||||||||||||||||||||||||||    
T  49387853 taatgttaaccaataaaatctcagcctagccggaaatcatggggtggtggatgttatgtatctttttttttatgaaagattaataaatgagactgaaatc 49387754  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  49387753 taaaggtgattattgtgc 49387736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 36072947 - 36073167
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  36072947 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaaat 36073046  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-----nnnnnnnatgaaagattaataaatgagactgaa 249  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||            ||||||||||||||||||||||||||    
T  36073047 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttttttatgaaagattaataaatgagactgaa 36073146  T
Q  250 atctaaaggtgtttattgtgc 270  Q
    ||||||||||| |||||||||    
T  36073147 atctaaaggtggttattgtgc 36073167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 44893280 - 44893062
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaa-tttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaa 152  Q
    ||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  44893280 agagcaatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaa 44893181  T
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||        ||||||||||||||||||||||||||||    
T  44893180 attaatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaat 44893081  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||||||| |||||||||    
T  44893080 ctaaaggtgattattgtgc 44893062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 2624837 - 2625053
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2624837 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatcacccttagattttatcaagaaataatcatgaaat 2624936  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |        ||||||||||||||||||||||||||||||    
T  2624937 taatgttaatcaataaaatctcagtctggccggaaatcatggagtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 2625036  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  2625037 aaaggtgattattgtgc 2625053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 53 - 270
Target Start/End: Original strand, 4751444 - 4751663
Alignment:
Q  53 cagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaa 152  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||    
T  4751444 cagagcaatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataaccacccttagattttatcaagaaatagtcctgaa 4751543  T
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||  |        |||||||||||||||||||||||||||    
T  4751544 attaatgttaaccaataaaatctcagtctggtcggaaatcatggggtggtgggtgttatgtattttcttttttatgaaagattaataaatgagactgaaa 4751643  T
Q  251 tctaaaggtgtttattgtgc 270  Q
    |||||||||| |||||||||    
T  4751644 tctaaaggtggttattgtgc 4751663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 56 - 270
Target Start/End: Complemental strand, 7745176 - 7744961
Alignment:
Q  56 agcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatt 155  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7745176 agcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaatt 7745077  T
Q  156 aatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |        |||||| |||||||||||||| |||||||||    
T  7745076 aatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaatattaataaatgagattgaaatcta 7744977  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  7744976 aaggtgattattgtgc 7744961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 54 - 255
Target Start/End: Complemental strand, 50156644 - 50156442
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || | |||    
T  50156644 agagcaatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcataaaa 50156545  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  50156544 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 50156445  T
Q  253 taa 255  Q
    |||    
T  50156444 taa 50156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 10442855 - 10442636
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10442855 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 10442756  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatg--tatcnnnnnnnatgaaagatt-aataaatgagactgaaa 250  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  | |         ||||||||| |||||||||||||||||    
T  10442755 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtttttttttttttttgaaagattaaataaatgagactgaaa 10442656  T
Q  251 tctaaaggtgtttattgtgc 270  Q
    |||||||||| |||||||||    
T  10442655 tctaaaggtgattattgtgc 10442636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 22199261 - 22199475
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||     
T  22199261 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcagccttagattttatcaagaaatagtcttgaaac 22199360  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  22199361 taatgttagccaataaaatctcagcctggccagaaatcat-gggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 22199459  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  22199460 aaggtgattattgtgc 22199475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 21802388 - 21802170
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  21802388 agagcaatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctgaaa 21802289  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatgg---ggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    ||||||||| ||||||||||||||| |||||||||||||||||   |||| ||||||||||||||        |||||||||||||||||||||||||||    
T  21802288 ttaatgttagccaataaaatctcagtctggccggaaatcatggggtggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaa 21802189  T
Q  251 tctaaaggtgtttattgtg 269  Q
    ||||| |||| ||||||||    
T  21802188 tctaagggtgattattgtg 21802170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 85 - 270
Target Start/End: Original strand, 9088900 - 9089086
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9088900 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagcctggc 9088999  T
Q  185 cggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||||||| || |||||||||    
T  9089000 cggaaatcatggggtggtgggtgttatgtatcttttttgtatgaaagattaataaatgagactgaaatctaaagatgattattgtgc 9089086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 266
Target Start/End: Complemental strand, 23964531 - 23964317
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  23964531 agagcaatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 23964432  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||||  |||||||||||||||||| |||||||||||| |||| |||||||||||||  |        ||||||||||||||||||||| ||||||    
T  23964431 ttaatgttagtcaataaaatctcagcctgaccggaaatcatgcggtggtgggtgttatgtatttttttttttatgaaagattaataaatgagattgaaat 23964332  T
Q  252 ctaaaggtgtttatt 266  Q
    |||||| || |||||    
T  23964331 ctaaagatgattatt 23964317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 33530754 - 33530533
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  33530754 agagcaatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 33530655  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat------cnnnnnnnatgaaagattaataaatgagactg 247  Q
     |||||||| |||||||||| |||||||||||||||||||| ||||| |||||||||||| |              ||||||||||||||||| ||||||    
T  33530654 ctaatgttagccaataaaatttcagcctggccggaaatcat-gggtggtgggtgttatgttttttttattttttttatgaaagattaataaataagactg 33530556  T
Q  248 aaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||| |||||||||    
T  33530555 aaatctaaaggtgattattgtgc 33530533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 37935007 - 37934792
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||    
T  37935007 agagcaatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaatactcacccttagattttatcaagaaattatcctgaaa 37934908  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||||||||||||||||||| |||| ||||||| ||||| || ||| ||||||||||        ||||||| ||||||||||||| ||||||||    
T  37934907 ttaatgttaaccaataaaatctcagtctggtcggaaattatgggatggtggttgttatgtatttttttttatgaaaggttaataaatgagattgaaatct 37934808  T
Q  254 aaaggtgtttattgtg 269  Q
    || |||| ||||||||    
T  37934807 aagggtgattattgtg 37934792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 87 - 259
Target Start/End: Original strand, 17655462 - 17655635
Alignment:
Q  87 aagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccg 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatgttagccaataaaatctcagcctggccg 17655561  T
Q  187 gaaatcatggggtgatgggtgt--tatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggt 259  Q
    ||||||||||| ||||||||||  |||||||        ||||||| ||||||||||||||||||||||||||||    
T  17655562 gaaatcatgggatgatgggtgttatatgtat-tttttttatgaaaggttaataaatgagactgaaatctaaaggt 17655635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 24392666 - 24392827
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||  | ||||||    
T  24392666 agagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatcacccttaaattttatcaagaaattgtactgaaa 24392765  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||  |||||||||||| | | ||||||||||||||||||||||||||||||||||    
T  24392766 ttaatgttagtcaataaaatctctgtcgggccggaaatcatggggtgatgggtgttatgtat 24392827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 42671675 - 42671827
Alignment:
Q  61 tgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgt 160  Q
    ||||||||||||| ||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatcacccttagattttatcaagaaattgtcctaaaattaatgt 42671774  T
Q  161 taaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgt 213  Q
    |||||||||||||||||   ||||||||||| ||||||||||| |||||||||    
T  42671775 taaccaataaaatctcaatttggccggaaattatggggtgatgagtgttatgt 42671827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 85 - 269
Target Start/End: Original strand, 30563239 - 30563424
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    ||||||||  ||||| ||||||| ||||||||| ||| | ||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||    
T  30563239 tcaagaaagattcaacaatgacacggcagaatagtcatctttagattttatcaagaaattatcctgcaattaatgttggccaataaaatctcagcctggc 30563338  T
Q  185 cggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtg 269  Q
    |||||||||||||||| ||||||||||||| |        ||||||| ||||||||| ||||||||||||||  ||| ||||||||    
T  30563339 cggaaatcatggggtggtgggtgttatgtattttttttttatgaaaggttaataaataagactgaaatctaagtgtgattattgtg 30563424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 101 - 215
Target Start/End: Original strand, 37219671 - 37219785
Alignment:
Q  101 aatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtg 200  Q
    |||||||||| | ||||||||| |||| |||||||||||||||  |||||||||||||||||  |||||||||||||| ||||||||||||||| |||||    
T  37219671 aatgacatggtaaaataatcactcttaaattttatcaagaaattgtcctgaaattaatgttagtcaataaaatctcagtctggccggaaatcattgggtg 37219770  T
Q  201 atgggtgttatgtat 215  Q
    |||| ||||||||||    
T  37219771 atggatgttatgtat 37219785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 213
Target Start/End: Complemental strand, 36073795 - 36073650
Alignment:
Q  68 tatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaa 167  Q
    |||||||||||||||| | ||||||  || |||||||||||| || |||||||||  ||||||||||| |||||||  |||| |||||||| ||| ||||    
T  36073795 tatcaagaaagattttatgaagaaagatttaagaatgacatgacaaaataatcacttttagattttatgaagaaattgtcctaaaattaatattagccaa 36073696  T
Q  168 taaaatctcagcctggccggaaatcatggggtgatgggtgttatgt 213  Q
    |||||||||||  |||||||||||||||||||| || |||||||||    
T  36073695 taaaatctcagtttggccggaaatcatggggtggtgcgtgttatgt 36073650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 44744452 - 44744594
Alignment:
Q  72 aagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaa 171  Q
    |||||||||||| | ||||||  || || |||||||||| |||||||||||||||| |||||||||| ||||  |||||||||| ||||||  | |||||    
T  44744452 aagaaagattttattaagaaatatttaaaaatgacatggtagaataatcacccttaaattttatcaaaaaattgtcctgaaattgatgttagtcgataaa 44744551  T
Q  172 atctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    || |||| ||||||||||||||| ||||| ||||||||||||||    
T  44744552 at-tcagtctggccggaaatcatagggtggtgggtgttatgtat 44744594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 215
Target Start/End: Original strand, 9111337 - 9111425
Alignment:
Q  127 agattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||||||||||||||||  ||  |||||||| ||||||||||||||| ||  |||||||| |||||||||||||||||||  |||||||    
T  9111337 agattttatcaagaaattgtctcgaaattaaagttaaccaataaaatttctacctggccgaaaatcatggggtgatgggttatatgtat 9111425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 11314255 - 11314184
Alignment:
Q  99 agaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataa 170  Q
    ||||||||||| ||||||||||| ||||||||| |||||||||||  | ||||||||||||||| |||||||    
T  11314255 agaatgacatgacagaataatcatccttagattatatcaagaaattgttctgaaattaatgttagccaataa 11314184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 25063373 - 25063443
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttaga 129  Q
    ||||||| |||||||||| |||||| ||||||||  |||||||||||||||| ||||||||||| ||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatcactcttaga 25063443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 36073615 - 36073543
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 36073543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 37219890 - 37219825
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| ||||||||  || |||||||||||||||||||||||| ||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatcatccttagattt 37219825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 46442110 - 46442038
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 46442038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 11314050 - 11314122
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatt 131  Q
    ||||||| |||||||||| |||||| ||||||||  | ||||||||||||| || ||||||||||||||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatcacccttagatt 11314122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 9089136 - 9089064
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  9089136 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagattt 9089064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 10442586 - 10442658
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 10442658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 21802119 - 21802191
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||||||||||||||    
T  21802119 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 21802191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 44893012 - 44893084
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 44893084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 44893692 - 44893620
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 44893620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 47290332 - 47290260
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||| | |||||||||| ||||||||    
T  47290332 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggtacaataatcacctttagattt 47290260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 53123297 - 53123225
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagattt 53123225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 22199525 - 22199453
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||||||| |||||||||| ||||||||    
T  22199525 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatggcacaataatcacctttagattt 22199453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 31078618 - 31078690
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | || |||||| |||||||||||||||| |||||||| | ||||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaatt-caagaatgacatggcacaataatcatctttagattt 31078690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 36073217 - 36073145
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| ||||||| || |||||| | ||||||| |||||||||||||||||| ||||| |||| ||||||||    
T  36073217 aatgctagatatcaaaaatgattttat-aagaaaaattcaagaatgacatggcacaataaccacctttagattt 36073145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 42671927 - 42671862
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| ||||||||  ||||||||||||||| || ||||||||  |||||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatcattcttagattt 42671862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 87 - 132
Target Start/End: Original strand, 49387713 - 49387758
Alignment:
Q  87 aagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  49387713 aagaaaaattcaagaatgacatggcacaataatcacctttagattt 49387758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 4751713 - 4751641
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| ||||||||||  ||||| | ||||||| || ||||||||||||||| ||||| |||| ||||||||    
T  4751713 aatgctagatatcaagaataattttat-aagaaaaatttaagaatgacatggcacaataaccacctttagattt 4751641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 7744919 - 7744983
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||  |||||||||||||| ||| |||||||||| ||||||||    
T  7744919 atatcaagaatgattttat-aagaaagattcaagaatgacattgcacaataatcacctttagattt 7744983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 17655697 - 17655624
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||| ||||| |||||| ||||||||  || |||||||||||| || |||||| ||| ||||||||    
T  17655697 aatgctagatattaagaatgattttatcaagaaagatttaagaatgacatgacataataattacctttagattt 17655624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 24128505 - 24128433
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||||||| || |||||| ||| ||||||||    
T  24128505 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagattt 24128433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 24392940 - 24392868
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  || ||||||||||| ||| |||||||| ||||||||||    
T  24392940 aatgctagatatcaagaatgatttat-caagaaatatttaagaatgacatagcacaataatcatccttagattt 24392868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 33530483 - 33530555
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | || || ||  |||||||||||||||| |||||||||| ||||||||    
T  33530483 aatgctagatatcaagaatgattttataaaaaagatc-caagaatgacatggcacaataatcacctttagattt 33530555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 50156386 - 50156449
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||| ||||||||||||||| || |||||||| ||||||||||    
T  50156386 atatcaagaatgattttat-aagaaaaattcaagaatgacatgacataataatca-ccttagattt 50156449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 169; Significance: 1e-90; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 4395 - 4612
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4395 agagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 4494  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||        |||||||||||||||||||||||||||||    
T  4495 ttaatgttaaccaataaaatctcagcctggccgaaaatcatggggtggtgggtgttatgtatctgttttttatgaaagattaataaatgagactgaaatc 4594  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  4595 taaaggtgattattgtgc 4612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 167; Significance: 2e-89; HSPs: 2)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 47850 - 48065
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47850 gagcaatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 47949  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  47950 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatcta 48049  T
Q  255 aaggtgtttattgtgc 270  Q
    ||| || |||||||||    
T  48050 aagatgattattgtgc 48065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 48115 - 48043
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||| ||| |||||||| | ||||||||    
T  48115 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatagcacaataatcatctttagattt 48043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 164; Significance: 1e-87; HSPs: 2)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 12841 - 13057
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  12841 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaa 12940  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||        |||||||||||||||||||||||||||||    
T  12941 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtatcttttttttatgaaagattaataaatgagactgaaatc 13040  T
Q  253 taaaggtgtttattgtg 269  Q
    |||||||  ||||||||    
T  13041 taaaggtaattattgtg 13057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 13108 - 13036
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||||||| || |||||| ||| ||||||||    
T  13108 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatgacacaataattacctttagattt 13036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 33696695 - 33696913
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33696695 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 33696794  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||  |        ||||||||||||||||||||||||||||    
T  33696795 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaat 33696894  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||||||| |||||||||    
T  33696895 ctaaaggtgattattgtgc 33696913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 33695393 - 33695176
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  33695393 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 33695294  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||  |        ||||||||||||||||||||||||||||    
T  33695293 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtaattttttttttatgaaagattaataaatgagactgaaat 33695194  T
Q  252 ctaaaggtgtttattgtg 269  Q
    ||||||||| ||||||||    
T  33695193 ctaaaggtgattattgtg 33695176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 55 - 268
Target Start/End: Complemental strand, 17176086 - 17175872
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  17176086 gagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaataatcatgaaat 17175987  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| |        ||||||||||||||||||||||||||||||    
T  17175986 taatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 17175887  T
Q  254 aaaggtgtttattgt 268  Q
    ||||||| |||||||    
T  17175886 aaaggtgattattgt 17175872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 18365639 - 18365423
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  18365639 agagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaa 18365540  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||||        ||||||||||||||||||||||||||||||    
T  18365539 ttaatgttagccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 18365440  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  18365439 aaaggtgattattgtgc 18365423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 18370903 - 18370687
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||    
T  18370903 agagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttaaattttatcaagaaatagtcttgaaa 18370804  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||||        ||||||||||||||||||||||||||||||    
T  18370803 ttaatgttagccaataaaatctcatcctggccggaaatcatggggtagtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 18370704  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  18370703 aaaggtgattattgtgc 18370687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 23291150 - 23290930
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  23291150 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaa 23291051  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat----cnnnnnnnatgaaagattaataaatgagactgaa 249  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||            ||||||||||||||||||||||||||    
T  23291050 ttaatgttaaccaataaaatctcagcctggccagaaatcatggggtgatgggtgttatgtattttcttttttttatgaaagattaataaatgagactgaa 23290951  T
Q  250 atctaaaggtgtttattgtgc 270  Q
    ||||||||||  |||||||||    
T  23290950 atctaaaggtaattattgtgc 23290930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 54 - 269
Target Start/End: Original strand, 28675147 - 28675363
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||  ||||||||    
T  28675147 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatcacccttagattttatcaagaaattgtcctgaaa 28675246  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||| |||| |||||||| |        ||||||| |||||||||||||||||||||    
T  28675247 ttaatgttagctaataaaatctcagcctggccggaaatcatggggtggtgggggttatgtattttttatttatgaaaggttaataaatgagactgaaatc 28675346  T
Q  253 taaaggtgtttattgtg 269  Q
    ||| |||| ||||||||    
T  28675347 taagggtgattattgtg 28675363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 6031806 - 6031589
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||  |||| ||||||| |||||||||||| ||||||||||||||||| |||||||||||||||| || ||||||    
T  6031806 gagcaatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaat 6031707  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||  |        || ||||||||||||||||||||||||||    
T  6031706 taatgttaaccaataaaatcccagcctggccggaaatcatggggtggtgggtgttatgtatttttttttttataaaagattaataaatgagactgaaatc 6031607  T
Q  253 taaaggtgtttattgtgc 270  Q
    |||||||| |||||||||    
T  6031606 taaaggtgattattgtgc 6031589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 55 - 250
Target Start/End: Original strand, 25986930 - 25987126
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||| |||||||||||||||| |||||||||    
T  25986930 gagcaatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatcactcttaaattttatcaagaaatagtcctgaaat 25987029  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||        ||||||||||| |||||||||||||||    
T  25987030 taatgttaaccaataaaatctcagtctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattagtaaatgagactgaaa 25987126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 66 - 269
Target Start/End: Original strand, 32702216 - 32702420
Alignment:
Q  66 tatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacc 165  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatcacccttagattttatcaagaaatagtcctgaaattaatattaacc 32702315  T
Q  166 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgttta 264  Q
    |||||||||| || || |||||||||||||||||| ||||| |||||||||        ||||||||||||||||||||||||||||||||||||  |||    
T  32702316 aataaaatctgagtctagccggaaatcatggggtggtgggtcttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtaatta 32702415  T
Q  265 ttgtg 269  Q
    |||||    
T  32702416 ttgtg 32702420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 55 - 269
Target Start/End: Complemental strand, 17705530 - 17705319
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  17705530 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttagattttatcaagaaattgtcctgaaat 17705431  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||         ||||||| ||||||||||||||||||||||     
T  17705430 taatgttagccaataaaatctcagtctggccggaaatcatgggatggtgggtgttatgta--attttttatgaaaggttaataaatgagactgaaatct- 17705334  T
Q  255 aaggtgtttattgtg 269  Q
    |||||| ||||||||    
T  17705333 aaggtgattattgtg 17705319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 6127274 - 6127493
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctg-aa 152  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || || ||    
T  6127274 agagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 6127373  T
Q  153 attaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta--tcnnnnnnnatgaaagattaataaatgagactgaaa 250  Q
    |||||||||| |||||||||| ||||  ||||| |||||||||||||| |||||||||||||  |        |||||||||||||||||||||||||||    
T  6127374 attaatgttagccaataaaatatcagtttggccagaaatcatggggtggtgggtgttatgtatttttttttatatgaaagattaataaatgagactgaaa 6127473  T
Q  251 tctaaaggtgtttattgtgc 270  Q
    |||||| ||| |||||||||    
T  6127474 tctaaaagtgattattgtgc 6127493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 54 - 256
Target Start/End: Complemental strand, 9752310 - 9752109
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||| | || | |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||  ||||||||    
T  9752310 agagcaatgttatatatcaagaaaaaattat-caagaaaaattcaagaatgatatggcagaataatcacccttagattttattaagaaattgtcctgaaa 9752212  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| ||||||||||||||||||||||    
T  9752211 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatttttttttatgaaaggttaataaatgagactgaaatct 9752112  T
Q  254 aaa 256  Q
    |||    
T  9752111 aaa 9752109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 54 - 270
Target Start/End: Complemental strand, 2309489 - 2309272
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| |||| |   ||| ||||||| ||||||||||||||||||||||||||||||||||||||  ||||||||    
T  2309489 agagcaatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatcacccttagattttatcaagaaattgtcctgaaa 2309390  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||  ||||||||||||| |        ||||||| |||||||||||||||||||||    
T  2309389 ttaatgttagccaataaaatctcagcttggccggaaatcatggggttgtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatc 2309290  T
Q  253 taaaggtgtttattgtgc 270  Q
    ||| |||| |||||||||    
T  2309289 taagggtgattattgtgc 2309272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 11548647 - 11548494
Alignment:
Q  61 tgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgt 160  Q
    ||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  | |||| ||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatcacccttagattttatcaagaaattgtactgatattaatgt 11548548  T
Q  161 taaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    || ||||||||||||| | | ||||||||||||||||||| ||||||||||||||    
T  11548547 tagccaataaaatctctgtcgggccggaaatcatggggtg-tgggtgttatgtat 11548494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 58 - 255
Target Start/End: Complemental strand, 8515787 - 8515591
Alignment:
Q  58 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaa 157  Q
    |||||||||||||||||||||||||| |||||| |  || |||||||||||||||||||||||||  || ||||||||||||||||  ||| ||||||||    
T  8515787 caatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatcacattt-gattttatcaagaaattgtcccgaaattaa 8515689  T
Q  158 tgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaa 255  Q
    ||||| |||||||||||||||||||  |||||||||||||||| ||| ||||||||||        ||||||  ||||||||| ||||||||||||||    
T  8515688 tgttagccaataaaatctcagcctgatcggaaatcatggggtggtggatgttatgtatttttttttatgaaatgttaataaataagactgaaatctaa 8515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 18889764 - 18889683
Alignment:
Q  52 ccagagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagatttta 134  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  18889764 ccagagcaatgctatatatcaagaaagatttat-caagaaaatttcaagaatgacatggcagaataataacccttagatttta 18889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 18889597 - 18889493
Alignment:
Q  166 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttat 265  Q
    |||||||||||||||| |||||||||||||||||| ||||| ||||||||        ||||||||||||||||||||||||||||||||||||| ||||    
T  18889597 aataaaatctcagccttgccggaaatcatggggtggtgggttttatgtatttttttttatgaaagattaataaatgagactgaaatctaaaggtgattat 18889498  T
Q  266 tgtgc 270  Q
    |||||    
T  18889497 tgtgc 18889493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 29693712 - 29693639
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| ||||||||  || |||||||||||||||||||||| ||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatgacccttagattt 29693639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 215
Target Start/End: Original strand, 29693542 - 29693598
Alignment:
Q  159 gttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||||    
T  29693542 gttagccaataaaatctcagcctggccggaaatcatggggtggtggatgttatgtat 29693598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 11548388 - 11548460
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | ||||||   |||||||||||||||||| |||||||||||||||||||    
T  11548388 aatgctagatatcaagaatgatttat-caagaacgattcaagaatgacatggcacaataatcacccttagattt 11548460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 28675414 - 28675342
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||||||||||||||    
T  28675414 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatcacccttagattt 28675342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 2309257 - 2309294
Alignment:
Q  95 ttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||||||||||| |||||||||||||||||||    
T  2309257 ttcaagaatgacatggcacaataatcacccttagattt 2309294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 17175820 - 17175892
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |||||||||||||||| | |||||||||| ||||||||    
T  17175820 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggtacaataatcacctttagattt 17175892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 32702471 - 32702399
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||||||| || |||||| ||| ||||||||    
T  32702471 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatgacacaataattacctttagattt 32702399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 33696963 - 33696891
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  || ||||||||||||||| |||||||||| ||||||||    
T  33696963 aatgctagatatcaagaatgattttat-aagaaagatttaagaatgacatggcacaataatcacctttagattt 33696891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 34238886 - 34238948
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcac 122  Q
    ||||||| |||||||||| |||||| ||||||| ||| ||||||||||||| || |||||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaagatt-caagaatgacatgacacaataatcac 34238948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 582534 - 582600
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatgg-cagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||| || |||||||| |||| ||||||||||||| ||||||||    
T  582534 atatcaagaatgattttattaagaaaaatttaagaatgatatgggcagaataatcaccattagattt 582600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 118
Target Start/End: Complemental strand, 18889623 - 18889593
Alignment:
Q  88 agaaaatttcaagaatgacatggcagaataa 118  Q
    |||||||||||||||||||||||||||||||    
T  18889623 agaaaatttcaagaatgacatggcagaataa 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 6031547 - 6031611
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | || || |||| ||||||||||||||| |||||||||| ||||||||    
T  6031547 atatcaagaatgattttataaaaaagattt-aagaatgacatggcacaataatcacctttagattt 6031611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 17705268 - 17705339
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  ||||||||||||||| || |||||||| ||||||||||    
T  17705268 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatgacacaataatca-ccttagattt 17705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 18365373 - 18365445
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||| ||| |||||||||| ||||||||    
T  18365373 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagattt 18365445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 18370637 - 18370709
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||| ||| |||||||||| ||||||||    
T  18370637 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatagcacaataatcacctttagattt 18370709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 18889478 - 18889515
Alignment:
Q  95 ttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  18889478 ttcaagaatgacatggcacaataatcacctttagattt 18889515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 11548474 - 11548438
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| |||| |||||||||    
T  11548474 aataaatgagactgaaatctaagggtgattattgtgc 11548438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 54 - 268
Target Start/End: Original strand, 41010 - 41224
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  41010 agagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaa 41109  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||        ||||||||||||||||||||||||||||||    
T  41110 ttaatgttagccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatct 41209  T
Q  254 aaaggtgtttattgt 268  Q
    ||||||| |||||||    
T  41210 aaaggtgattattgt 41224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 160; Significance: 2e-85; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 45637711 - 45637927
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45637711 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaa 45637810  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||| || ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||        ||||||||||||||||||||||||||||||    
T  45637811 ttaatgctagccaataaaatctcagtctggccggaaatcatggggtggtggatgttatgtatttttttttatgaaagattaataaatgagactgaaatct 45637910  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  45637911 aaaggtgattattgtgc 45637927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 48880992 - 48880776
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  48880992 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcctgaaat 48880893  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||        ||||||||||||||||||| ||||||||||    
T  48880892 taatgttaaccaataaaatctcagcctggccggaaatcatggggtggtgggtgttatgtatcttttttttatgaaagattaataaatgaaactgaaatct 48880793  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||| ||| |||||||||    
T  48880792 aaatgtgattattgtgc 48880776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 3961979 - 3962194
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||| || ||||||    
T  3961979 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatcacccttaaattttatcaagaaatagtcttgaaat 3962078  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  3962079 taatgttagccaataaaatctcagcttggccggaaatcatggggtggtgggtgttatgtatttttttttatgaaagattaataaatgagactgaaatcta 3962178  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  3962179 aaggtgattattgtgc 3962194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 55 - 270
Target Start/End: Complemental strand, 4974800 - 4974584
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  4974800 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaattatcctgaaat 4974701  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| |||||||||||||||  ||||||||||||||| |||| ||||||||||||| |        ||||||| ||||||||||||||||||||||    
T  4974700 taatgttagccaataaaatctcagtttggccggaaatcatgaggtggtgggtgttatgtattttttttttatgaaaggttaataaatgagactgaaatct 4974601  T
Q  254 aaaggtgtttattgtgc 270  Q
    || |||| |||||||||    
T  4974600 aagggtgattattgtgc 4974584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 42611811 - 42612027
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  42611811 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaat 42611910  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||| |||||||||| |||| ||| ||||||||||||||||| ||||||||||||| |        ||||||||||||||||| ||||||||||||    
T  42611911 taatgttagccaataaaatttcagtctgaccggaaatcatggggtggtgggtgttatgtattttttttttatgaaagattaataaataagactgaaatct 42612010  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  42612011 aaaggtgattattgtgc 42612027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 24394972 - 24395187
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||  ||| |||||||||||||| ||||| | |||||||    
T  24394972 gagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataacaacctttagattttatcaaaaaatagttctgaaat 24395071  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||        |||||||||||||||||||||||||||||||    
T  24395072 taatgttagccaataaaatctcaacctggccggaaatcatggggtggtgggtgttatgtatttatttttatgaaagattaataaatgagactgaaatcta 24395171  T
Q  255 aaggtgtttattgtgc 270  Q
    |||||| |||||||||    
T  24395172 aaggtgattattgtgc 24395187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 25167915 - 25167754
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| | |||||||    
T  25167915 gagcaatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatcatccttagattttatcaagaaatagttctgaaat 25167816  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc 216  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25167815 taatgttaaccaataaaatctcagtctggccggaaatcatggggtgatgggtgttatgtatc 25167754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 54 - 211
Target Start/End: Original strand, 35444557 - 35444714
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  35444557 agagcaatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaa 35444656  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttat 211  Q
    ||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||    
T  35444657 ttaatgttaaccaataaaatctcagcctggccgaaaatcatgggatggtgggtgttat 35444714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 34482835 - 34483054
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34482835 gagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcctgaaat 34482934  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-----tcnnnnnnnatgaaagattaataaatgagactgaa 249  Q
    |||||||| ||||||||||||||| ||||||||||||||| ||||| |||||||||||||     |        ||||||||||||||||||||| ||||    
T  34482935 taatgttagccaataaaatctcagtctggccggaaatcat-gggtggtgggtgttatgtattttttttatttttatgaaagattaataaatgagattgaa 34483033  T
Q  250 atctaaaggtgtttattgtgc 270  Q
    ||||||||||| |||||||||    
T  34483034 atctaaaggtgattattgtgc 34483054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 54 - 270
Target Start/End: Original strand, 15329272 - 15329490
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||    
T  15329272 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcttgaaa 15329371  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgtta--tgtatcnnnnnnnatgaaagattaataaatgagactgaaat 251  Q
    |||||||||  |||||||||||||| ||||||||||||||||||||| || ||||||  | | |        ||||||||||||||||||||||||||||    
T  15329372 ttaatgttagtcaataaaatctcagactggccggaaatcatggggtggtgagtgttattttttttattttttatgaaagattaataaatgagactgaaat 15329471  T
Q  252 ctaaaggtgtttattgtgc 270  Q
    ||||| ||| |||||||||    
T  15329472 ctaaaagtgattattgtgc 15329490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 54 - 269
Target Start/End: Complemental strand, 15577916 - 15577697
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || |||||    
T  15577916 agagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagactttatcaagaaaaagtcttgaaa 15577817  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta----tcnnnnnnnatgaaagattaataaatgagactgaa 249  Q
    ||||||||| |||||| |||||||| |||||||||||||||||| || |||||||||||||    |        || |||||||||||||||||||||||    
T  15577816 ttaatgttagccaatataatctcagtctggccggaaatcatgggttggtgggtgttatgtatttttttttttttataaaagattaataaatgagactgaa 15577717  T
Q  250 atctaaaggtgtttattgtg 269  Q
    ||||||||||| ||||||||    
T  15577716 atctaaaggtgattattgtg 15577697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 85 - 270
Target Start/End: Original strand, 30848599 - 30848785
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  30848599 tcaagaaaattttaagaatgacatggcagaataatcatccttagattttatcaagaaatagtcctgaaattaatgttaaccaataaaatctcagtctggc 30848698  T
Q  185 cggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||| |  |||||||||||||||        |||||||||||||||||||||||||||| |||||||| |||||||||    
T  30848699 cggaaatcatgggatagtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatttaaaggtgattattgtgc 30848785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 55 - 255
Target Start/End: Complemental strand, 20010162 - 20009963
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||||||| ||||  |||||||||    
T  20010162 gagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacata-cagaataatcacccttagattttatcaaaaaattgtcctgaaat 20010064  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnnatgaaagattaataaatgagactgaaatcta 254  Q
    |||||||| |||||||||||||| ||||||||||||| ||||||| |||||||||||||||        || |||| ||||||||||||||| |||||||    
T  20010063 taatgttagccaataaaatctcaacctggccggaaattatggggttatgggtgttatgtattttttcttattaaaggttaataaatgagactaaaatcta 20009964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 54 - 215
Target Start/End: Complemental strand, 37477146 - 37476985
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    |||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||| ||||| |||||||||||||||  | ||||||    
T  37477146 agagcaatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatcatccttaaattttatcaagaaattgtactgaaa 37477047  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||||||||||| | | ||||||||||||||||||| ||||||||||||||    
T  37477046 ttaatgttagccaataaaatctctgtcgggccggaaatcatggggtggtgggtgttatgtat 37476985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 54 - 215
Target Start/End: Original strand, 18036977 - 18037138
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||||||| ||||  | ||||||    
T  18036977 agagcaatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatcacccttaaattttatcaaaaaattgtactgaaa 18037076  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||||| ||||||||||||| | | |||| |||||||||||||| ||||||||||||||    
T  18037077 ttaatgttagccaataaaatctctgtcgggccagaaatcatggggtggtgggtgttatgtat 18037138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 59 - 269
Target Start/End: Original strand, 29737143 - 29737359
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaat 158  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||  ||| |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatcacccttagattttattaagaaattgtcccgaaattaat 29737242  T
Q  159 gttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatcnnnnnnn------atgaaagattaataaatgagactgaaatc 252  Q
    |||| |||||||||||||| |||| ||||||||||||||||  |||| |||||||||              ||||||| |||||||||||||||||||||    
T  29737243 gttagccaataaaatctcaacctgaccggaaatcatggggtagtgggagttatgtatttttttttctttctatgaaaggttaataaatgagactgaaatc 29737342  T
Q  253 taaaggtgtttattgtg 269  Q
    ||| |||| ||||||||    
T  29737343 taagggtgattattgtg 29737359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 55 - 211
Target Start/End: Original strand, 15238382 - 15238538
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||  | |||||||    
T  15238382 gagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatcaccattagattttatcaagaaattgtactgaaat 15238481  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttat 211  Q
    ||||||||  |||||||||||| | | ||||||||||||||||||| ||||||||||    
T  15238482 taatgttagtcaataaaatctctgtcgggccggaaatcatggggtggtgggtgttat 15238538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 54 - 268
Target Start/End: Original strand, 42696082 - 42696297
Alignment:
Q  54 agagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaa 153  Q
    ||||||||| |||||||||||||||||||| | || ||  ||| ||||||||||| |||||||||||||||||| |||||||||||||||  ||||||||    
T  42696082 agagcaatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatcacccttatattttatcaagaaattgtcctgaaa 42696181  T
Q  154 ttaatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatc 252  Q
    |||||||||  ||||||||||||| ||||||||||||||| |||||| ||| ||||||||| |        ||||||  |||||||||||||||||||||    
T  42696182 ttaatgttagtcaataaaatctcaacctggccggaaatcaaggggtggtggatgttatgtattttttttttatgaaaagttaataaatgagactgaaatc 42696281  T
Q  253 taaaggtgtttattgt 268  Q
    ||| |||| |||||||    
T  42696282 taagggtgattattgt 42696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 58 - 215
Target Start/End: Complemental strand, 36790528 - 36790371
Alignment:
Q  58 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaa 157  Q
    ||||||||||||||||||||| |||| ||||||||| || |||||||||||||||||||||| ||||||| |||||||||||||||  | ||||||||||    
T  36790528 caatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataattacccttaaattttatcaagaaattgttctgaaattaa 36790429  T
Q  158 tgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||| ||||||||||||||| || |||| || |  | ||||| ||||||||||||||    
T  36790428 tgttagccaataaaatctcagtctagccgaaattttttgggtggtgggtgttatgtat 36790371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Complemental strand, 40880827 - 40880708
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    |||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||     
T  40880827 tcaagaaaaactcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctggt 40880728  T
Q  185 cggaaatcatggggtgatgg 204  Q
    || |||||||||||| ||||    
T  40880727 cgaaaatcatggggtcatgg 40880708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 270
Target Start/End: Original strand, 35876414 - 35876460
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  35876414 atgaaagattaataaatgagactgaaatctaaaggtgattattgtgc 35876460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 25167655 - 25167727
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 25167727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 224 - 269
Target Start/End: Original strand, 35445567 - 35445612
Alignment:
Q  224 atgaaagattaataaatgagactgaaatctaaaggtgtttattgtg 269  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||    
T  35445567 atgaaagattaataaatgagactgaaatctaaaggtgattattgtg 35445612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 4974534 - 4974606
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | || || ||| |||||||||||||||| |||||||||||||||||||    
T  4974534 aatgctagatatcaagaatgattttataaaaaagatt-caagaatgacatggcacaataatcacccttagattt 4974606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 42696342 - 42696277
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| || |||||| |||| |||| |||||||||||||||| | |||||||||||||||||||    
T  42696342 atatcaataatgattttatcaaaaaaaattcaagaatgacatggtacaataatcacccttagattt 42696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 48880726 - 48880798
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||  ||||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacatttagattt 48880798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 3962244 - 3962172
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | |||||||||||||||| |||||||||| ||||||||    
T  3962244 aatgctagatatcaagaatgattttat-aagaaatatccaagaatgacatggcacaataatcacctttagattt 3962172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 24395237 - 24395165
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | || || ||| |||||||||||||||| |||||||||| ||||||||    
T  24395237 aatgctagatatcaagaatgattttataaaaaagatt-caagaatgacatggcacaataatcacctttagattt 24395165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 29737403 - 29737338
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| ||||||||  || |||||| ||||| || |||||||||||||||||||    
T  29737403 atatcaagaatgattttatcaagaaagatttaagaataacatgtcacaataatcacccttagattt 29737338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 30848835 - 30848763
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| | |||| | ||||||| |||||||||||||||||| |||||||||| ||| ||||    
T  30848835 aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatcacctttaaattt 30848763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 34483096 - 34483032
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  34483096 atatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 34483032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 35445663 - 35445591
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| ||||||||||| ||| || |||||||||| ||||||||    
T  35445663 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgatatgacacaataatcacctttagattt 35445591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 37476879 - 37476951
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| ||||| | |||||||  || || |||||||||||| |||||||||||||||||||    
T  37476879 aatgctagatatcaagaatgatttat-caagaaagatttaataatgacatggcacaataatcacccttagattt 37476951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 45637977 - 45637905
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||| ||||| |||||| | ||||||  |||||||||||||||||| |||||||||| ||||||||    
T  45637977 aatgctagatattaagaatgattttat-aagaaagattcaagaatgacatggcacaataatcacctttagattt 45637905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 15329540 - 15329468
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||| ||||| |||||| | ||||||  |||||||||||||||||| |||||||||  ||||||||    
T  15329540 aatgctagatataaagaatgattttat-aagaaatattcaagaatgacatggcacaataatcacttttagattt 15329468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Original strand, 15577646 - 15577718
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  | ||||||||||||| || |||||||||| ||||||||    
T  15577646 aatgctagatatcaagaatgattttat-aagaaagatccaagaatgacatgtcacaataatcacctttagattt 15577718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 18037243 - 18037171
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| ||||||| || ||||| | |||||||  || ||||||||||||| | |||||||||||||||||||    
T  18037243 aatgctagatatcaacaatgatttat-caagaaagatttaagaatgacatggtacaataatcacccttagattt 18037171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 42612077 - 42612005
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||  |  ||||||||||||||| |||||||||| ||||||||    
T  42612077 aatgctagatatcaagaatgattttat-aagaaagatctaagaatgacatggcacaataatcacctttagattt 42612005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 37476965 - 37476929
Alignment:
Q  234 aataaatgagactgaaatctaaaggtgtttattgtgc 270  Q
    |||||||||||||||||||||| |||| |||||||||    
T  37476965 aataaatgagactgaaatctaagggtgattattgtgc 37476929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 152; Significance: 1e-80; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 55 - 270
Target Start/End: Original strand, 11621 - 11837
Alignment:
Q  55 gagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaat 154  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||||    
T  11621 gagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatcacccttagattttatcaagaaatagtcatgaaat 11720  T
Q  155 taatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgta-tcnnnnnnnatgaaagattaataaatgagactgaaatct 253  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||| |        ||||||||||||||||||||||||||||||    
T  11721 taatgttaaccaataaaatctcagcctggccgaaaatcatggggtggtgagtgttatgtattttttttttatgaaagattaataaatgagactgaaatct 11820  T
Q  254 aaaggtgtttattgtgc 270  Q
    ||||||| |||||||||    
T  11821 aaaggtgattattgtgc 11837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 132
Target Start/End: Complemental strand, 11879 - 11815
Alignment:
Q  67 atatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    |||||||||| |||||| | ||||||| || ||||||||||||||| |||||||||| ||||||||    
T  11879 atatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatcacctttagattt 11815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 149; Significance: 9e-79; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 66 - 270
Target Start/End: Original strand, 25947 - 26152
Alignment:
Q  66 tatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacc 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaacc 26046  T
Q  166 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgttta 264  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||||        ||||||||||||||||||||||||||||||||||||| |||    
T  26047 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaaggtgatta 26146  T
Q  265 ttgtgc 270  Q
    ||||||    
T  26147 ttgtgc 26152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 66 - 270
Target Start/End: Original strand, 15995 - 16200
Alignment:
Q  66 tatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacc 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaacc 16094  T
Q  166 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaaggtgttta 264  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||||        |||||||||||||||||||||||||||||||||| || |||    
T  16095 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaagatgatta 16194  T
Q  265 ttgtgc 270  Q
    ||||||    
T  16195 ttgtgc 16200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 66 - 257
Target Start/End: Original strand, 8413 - 8605
Alignment:
Q  66 tatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaacc 165  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaatagttctgaaattaatgttaacc 8512  T
Q  166 aataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtatc-nnnnnnnatgaaagattaataaatgagactgaaatctaaag 257  Q
    ||||||||||||| |||||||||||||||||| || |||||||||||||||        ||||||||||||||||||||||||||||||||||    
T  8513 aataaaatctcaggctggccggaaatcatgggatggtgggtgttatgtatcttttttttatgaaagattaataaatgagactgaaatctaaag 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 26202 - 26130
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||||| ||||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcacctttagattt 26130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 132
Target Start/End: Complemental strand, 16250 - 16178
Alignment:
Q  59 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattt 132  Q
    ||||||| |||||||||| |||||| | ||||||| |||||||||||||||||| |||||||| | ||||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatcatctttagattt 16178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 104; Significance: 6e-52; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 56 - 215
Target Start/End: Original strand, 3069 - 3223
Alignment:
Q  56 agcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaatt 155  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||    
T  3069 agcaatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatcacccttagattttatcaagaaatagtcttgaaatt 3168  T
Q  156 aatgttaaccaataaaatctcagcctggccggaaatcatggggtgatgggtgttatgtat 215  Q
    ||||||| |||||||||||||||||     | ||||||| ||||| ||||||||||||||    
T  3169 aatgttagccaataaaatctcagcc-----gaaaatcatagggtggtgggtgttatgtat 3223  T

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Target: scaffold0041 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 85456 - 85575
Alignment:
Q  85 tcaagaaaatttcaagaatgacatggcagaataatcacccttagattttatcaagaaataatcctgaaattaatgttaaccaataaaatctcagcctggc 184  Q
    |||||||||  |||||||||||||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||||| |||||||||||| |||||||     
T  85456 tcaagaaaaactcaagaatgacatggcagaataatcatccttaaattttatgaagaaattatcctgaaattaatgttagccaataaaatcttagcctggt 85555  T
Q  185 cggaaatcatggggtgatgg 204  Q
    || |||||||||||| ||||    
T  85556 cgaaaatcatggggtcatgg 85575  T

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