View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1335_low_62 (Length: 208)
Name: NF1335_low_62
Description: NF1335
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1335_low_62 |
 | |
|
| [»] scaffold0133 (3 HSPs) |
| | |
|
| [»] scaffold0144 (1 HSPs) |
| | |
|
| [»] scaffold0256 (1 HSPs) |
| | |
|
| [»] scaffold0230 (1 HSPs) |
| | |
|
| [»] scaffold0511 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0133 (Bit Score: 176; Significance: 5e-95; HSPs: 3)
Name: scaffold0133
Description:
Target: scaffold0133; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 8482 - 8295
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
8482 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctgtacaagcaa |
8383 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8382 |
cgaacatcaatggatttctgtactggaaagtgaattttggaatttgcctgaggttgattctatcatgtctgctttgagaataagctac |
8295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 17 - 195
Target Start/End: Complemental strand, 12824 - 12646
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | |
|
|
| T |
12824 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattaggaagcagtttgtgctttacaagtga |
12725 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgaga |
195 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
12724 |
cgaacatcaatggatttctgtactagaaagtgagttttggagtttacctgaggttgatcctatcatgtctgctttgaga |
12646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0133; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 204
Target Start/End: Complemental strand, 18028 - 17843
Alignment:
| Q |
19 |
gcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaacg |
118 |
Q |
| |
|
|||||||||| |||||||| || || ||||||||||||| |||||||||||||||||||| || || ||||| ||| | || |||||| ||| | | |
|
|
| T |
18028 |
gcagagcttgcagcaataggtaaggagatagtgagaaaatgcgtgggttcacctcttgctgccaaggttttgggaagccttctgcgctttaaaagtgagg |
17929 |
T |
|
| Q |
119 |
aacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
||||||||||| |||||||| |||||||||| |||||||||| |||||| | | |||| ||||||||||||||| ||| |||| |
|
|
| T |
17928 |
aacatcaatggctttctgtaaaggaaagtgaggtttggaatttatctgaggataaccctataatgtctgctttgagactaagctac |
17843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 141; Significance: 4e-74; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 17 - 193
Target Start/End: Complemental strand, 16797144 - 16796968
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |
|
|
| T |
16797144 |
gtgcagagcttgtggcaataggcaagaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagcagtttgcgctttacaagcga |
16797045 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttga |
193 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
16797044 |
cgaacatcaatggatttctgtactggaaagtgaattttggaatttacctcaggttgatcgtatcatgtctgctttga |
16796968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 16787942 - 16787755
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||| | |
|
|
| T |
16787942 |
gtgcagagcttgtggaaataggcaagaagttagtgagaaaatgtgtgggttcaactcttgctgctaaagtattgggaagcagtttgcgatttacaagcga |
16787843 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||| ||||||| ||| |||| |
|
|
| T |
16787842 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttaactgaggatgatcctatcatgtctgttttgagactaagctac |
16787755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 17069481 - 17069337
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||| | |
|
|
| T |
17069481 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
17069382 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaattt |
161 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
17069381 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaattt |
17069337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 17 - 161
Target Start/End: Original strand, 16868186 - 16868330
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||| | |
|
|
| T |
16868186 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
16868285 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaattt |
161 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
16868286 |
tgaacatcaatggacttctgtggtggaaagtgagttttggaattt |
16868330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 16987429 - 16987242
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||| |||||| || ||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||||||| | || | |
|
|
| T |
16987429 |
gtgcagagcttgtggaaataggtaagaagttggtgagaaaatttgtgggttcacctcttgctgctaaagtattgggaagcagtttgcaacgtgaaactga |
16987330 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||| ||||||| |||||||||||| ||| |||| |
|
|
| T |
16987329 |
cgaacatcaatggatttctgtactggaaagtgagatttggaatttacctgaggatgatcctatcatttctgctttgagactaagctac |
16987242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 16657987 - 16657843
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||| | |
|
|
| T |
16657987 |
gtgcagatcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttacgctttaaaagcga |
16657888 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaattt |
161 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
16657887 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaattt |
16657843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 16837655 - 16837525
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||| | |
|
|
| T |
16837655 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
16837556 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagt |
147 |
Q |
| |
|
|||||||||||||||||||| |||||||| |
|
|
| T |
16837555 |
tgaacatcaatggatttctgtggtggaaagt |
16837525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 19 - 157
Target Start/End: Original strand, 18806384 - 18806522
Alignment:
| Q |
19 |
gcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaacg |
118 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| | || ||| |||| |||||| || | | |
|
|
| T |
18806384 |
gcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttcacctcttgccgcaaaagtactaggaagccttttgcgctttaaaactgagg |
18806483 |
T |
|
| Q |
119 |
aacatcaatggatttctgtactggaaagtgagttttgga |
157 |
Q |
| |
|
||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
18806484 |
aacatcaatggctttctgtaaaggaaagtaagttttgga |
18806522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 17 - 157
Target Start/End: Original strand, 18873376 - 18873516
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||| | || ||| |||| |||||| || | |
|
|
| T |
18873376 |
gtgcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttctcctcttgccgcaaaagtactaggaagccttttgcgctttaaaactga |
18873475 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttgga |
157 |
Q |
| |
|
|||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
18873476 |
ggaacatcaatggctttctgtaaaggaaagtaagttttgga |
18873516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 18 - 204
Target Start/End: Complemental strand, 16781073 - 16780887
Alignment:
| Q |
18 |
tgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaac |
117 |
Q |
| |
|
||||||||||| ||||||||||| || |||||| |||||||||||||||||| |||||||| || || ||||| ||| |||| |||||| || | |
|
|
| T |
16781073 |
tgcagagcttgcagcaataggcaaggagatagtgataaaatgtgtgggttcaccacttgctgccaaggttttgggaagccttttgcgctttaaaaatgag |
16780974 |
T |
|
| Q |
118 |
gaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| ||||||| || |||||| | | |||||||||||||||||||| ||| |||| |
|
|
| T |
16780973 |
gaacatcaatggctttctgtaaaggaaagtgagctttggaagttatctgaggataaccctatcatgtctgctttgagactaagctac |
16780887 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 87
Target Start/End: Complemental strand, 16843778 - 16843708
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagta |
87 |
Q |
| |
|
||||||| ||||| ||||||| || || |||| ||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
16843778 |
gtgcagaccttgtaacaataggtaaggagatagttagaaaatgtgtgggttcgcctcttgctgccaaagta |
16843708 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0144 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0144
Description:
Target: scaffold0144; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 17 - 161
Target Start/End: Complemental strand, 37465 - 37321
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||| | |
|
|
| T |
37465 |
gtgcagagcttgtggaaataggccaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggaagccttttgcgctttaaaagcga |
37366 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaattt |
161 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
37365 |
tgaacatcaatggatttctgtggtggaaagtgagttttggaattt |
37321 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 87; Significance: 7e-42; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 18 - 204
Target Start/End: Original strand, 38939546 - 38939732
Alignment:
| Q |
18 |
tgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaac |
117 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| ||| |||| |||||| ||| | |
|
|
| T |
38939546 |
tgcagagcttgtagcaataggcaaggagatagtgagaaaatgtgtgggttcacctcttgctgccaaagtattgggaagccttttgcgctttaaaagtgag |
38939645 |
T |
|
| Q |
118 |
gaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| |||||||||| |||||| | | |||||||||||||||||||| ||| |||| |
|
|
| T |
38939646 |
gaacatcaatggttttctgtaaaggaaagtgagctttggaatttatctgaggataaccctatcatgtctgctttgagactaagctac |
38939732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 194
Target Start/End: Original strand, 7053453 - 7053629
Alignment:
| Q |
18 |
tgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaac |
117 |
Q |
| |
|
||||||||||| |||||||||| || ||||||||||||||||||||||||||||||| || |||||||| || ||| ||| | |||| | | | |
|
|
| T |
7053453 |
tgcagagcttgccacaataggcaaggagatagtgagaaaatgtgtgggttcacctcttgcagcaaaagtattaggaagccttttacgatttaaacgtgag |
7053552 |
T |
|
| Q |
118 |
gaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgag |
194 |
Q |
| |
|
||||||||||| ||||| || |||||| ||||||||||||| |||||| | || | ||||||||||||||||| |
|
|
| T |
7053553 |
aaacatcaatggctttctataaaggaaagcaagttttggaatttatctgaggataatccaatcatgtctgctttgag |
7053629 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0256 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0256
Description:
Target: scaffold0256; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 32 - 204
Target Start/End: Complemental strand, 9111 - 8939
Alignment:
| Q |
32 |
caataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaacgaacatcaatggat |
131 |
Q |
| |
|
|||||||||| || | |||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||| ||| | |||||||||||| | |
|
|
| T |
9111 |
caataggcaaggagattgtgagaaaatgtgtgggttcacctcttgctgccaaagtattgggaagtcttttgtgctttaaaagtgaggaacatcaatggct |
9012 |
T |
|
| Q |
132 |
ttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
||||| |||||||||| |||||||||| |||||| |||| |||||||||||||||||||| ||| |||| |
|
|
| T |
9011 |
ctctgtcaaggaaagtgagctttggaatttaactgaggatgatcctatcatgtctgctttgagactaagctac |
8939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 68; Significance: 1e-30; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 17 - 204
Target Start/End: Complemental strand, 13378066 - 13377879
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
|||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| || || ||||| ||| || | |||||| ||| | |
|
|
| T |
13378066 |
gtgcagagcttgcagcaataggcaaggagatagtgagaaaatgtgtgggttcacctcttgctgccaaggttttgggaagcctttcgcgctttaaaagtga |
13377967 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttggaatttgcctgaggttgattctatcatgtctgctttgagaataatctac |
204 |
Q |
| |
|
|||||||||||| |||||||| ||||||| || |||||||||| |||||| | | |||||||||||||||||||| ||| |||| |
|
|
| T |
13377966 |
ggaacatcaatggctttctgtaaaggaaagtaagctttggaatttatctgaggataaccctatcatgtctgctttgagactaagctac |
13377879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0230 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0230
Description:
Target: scaffold0230; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 4648 - 4507
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtag-cagtttgtgctttacaagca |
115 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| | || || | |||| |||||| ||| |
|
|
| T |
4648 |
gtgcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttcgcctcttgctgccaaagtactaggaagcctttttgcgctttaaaagtg |
4549 |
T |
|
| Q |
116 |
acgaacatcaatggatttctgtactggaaagtgagttttgga |
157 |
Q |
| |
|
| |||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
4548 |
aggaacatcaatggctttctgtaaaggaaagtaagttttgga |
4507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0511 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0511
Description:
Target: scaffold0511; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 17 - 157
Target Start/End: Complemental strand, 9328 - 9188
Alignment:
| Q |
17 |
gtgcagagcttgtggcaataggcaaaaagttagtgagaaaatgtgtgggttcacctcttgctgctaaagtattgggtagcagtttgtgctttacaagcaa |
116 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| || |||||| | || || |||| |||||| ||| | |
|
|
| T |
9328 |
gtgcagagcttgtggcaataggcaaggagttagtgagaaaatgtgtgggttcgcctcttgccgccaaagtactaggaagtcttttgcgctttaaaagtga |
9229 |
T |
|
| Q |
117 |
cgaacatcaatggatttctgtactggaaagtgagttttgga |
157 |
Q |
| |
|
|||||||||||| |||||||| ||| ||| ||||||||| |
|
|
| T |
9228 |
ggaacatcaatggctttctgtaaaggacagtaagttttgga |
9188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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