View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13360_high_11 (Length: 202)
Name: NF13360_high_11
Description: NF13360
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13360_high_11 |
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Alignment Details
Target: chr5 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 47 - 185
Target Start/End: Original strand, 29092565 - 29092697
Alignment:
| Q |
47 |
tatcaattggattcccttatgagaaggttcagcaagacagttcttcttcaagttttatcttgccctttcaacttcaagtgacaatttttctcttagttgc |
146 |
Q |
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| T |
29092565 |
tatcaattggattcccttatgagaaggttcagcaagacagttcttcttcaagtattatcttgccct------ttcaagtgacaatttttctcttagttgc |
29092658 |
T |
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| Q |
147 |
cacaatctctatgttagtaccaaagacatgggcactgat |
185 |
Q |
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| T |
29092659 |
cacaatctctatgttagtaccaaagacatgggcactgat |
29092697 |
T |
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