View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13361_high_4 (Length: 460)
Name: NF13361_high_4
Description: NF13361
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13361_high_4 |
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Alignment Details
Target: chr3 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 19 - 450
Target Start/End: Original strand, 26454898 - 26455329
Alignment:
| Q |
19 |
gtttcttggctcaccttcagctccttaagattgttttgtgtggatttcatgaacttgcccataatctcatctaacttaaagggtttcctttaatgctagt |
118 |
Q |
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| T |
26454898 |
gtttcttggctcaccttcagctccttaagattgttttgtgtggatttcatgaacttgcccataatctcatctaacttaaagggtttcctttaatgctagt |
26454997 |
T |
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| Q |
119 |
tgggtggaggtacttgtgtttgatttagaaagttgttgcaccacttcatattatgatgattttttcttgcattaatgtaggtgttaaaaaatgggttgcc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26454998 |
tgggtggaggtacttgtgtttgatttagaaagttgttgcaccacttcatattatgatgattttttcttgcattaatgtaggtgttaaaaaatgggttgcc |
26455097 |
T |
|
| Q |
219 |
tctcttgtaatcaccacgtagttggcttcctcagttgtatcttcaacaatgccttccttgttctatttcccataattacacttccatacttttgtttgtt |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26455098 |
tctcttgtaatcaccacgtagttggcttcctcagttgtatcttcaacaatgccttacttgttctatttcccataattacacttccatacttttgtttgtt |
26455197 |
T |
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| Q |
319 |
gtgacttggaacaatggcttcctcagttgcatcttcagtttaacttcttggtgagagtcacgaattgggaagccatagggttgtggttgaccataaaagt |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26455198 |
gtgacttggaacaatggcttcctcagttgcatcttcagtttaacttcttggtgagagtcacgaattgggaagccatagggttgtggttgaccataaaagt |
26455297 |
T |
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| Q |
419 |
tctataggcatccagctccaaaacttcctatg |
450 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
26455298 |
tctataggcatccagctccaaaacttcctatg |
26455329 |
T |
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