View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13362_low_3 (Length: 209)
Name: NF13362_low_3
Description: NF13362
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13362_low_3 |
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Alignment Details
Target: chr3 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 47045095 - 47045273
Alignment:
| Q |
17 |
catatcatgaatctggcaatagctttgttgtttcaattaaagttgcccaaatatttttggttttatgcaaccacccatgatgattagcatgaaaaattat |
116 |
Q |
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| T |
47045095 |
catatcatgaatctggcaatagctttgttgtttcaattaaagttgcccaaatatttttggttttatgcaaccacccatgttgattagcatgaaaaattat |
47045194 |
T |
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| Q |
117 |
cctcattgttttgttaaggaagggtataagtagtcaatttcagattactccttgtttaccccttgtgaatggtactgatt |
196 |
Q |
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| T |
47045195 |
cctcattg-tttgttaaggaagggtataagtagtcaatttcagattactccttgtttaccccttgtgaatggtactgatt |
47045273 |
T |
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