View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13366_high_32 (Length: 270)
Name: NF13366_high_32
Description: NF13366
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13366_high_32 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 34479268 - 34479026
Alignment:
| Q |
18 |
agaagataccataaaatactaacaacactaatgtcatgaactctataatcggttggattgtttgtcatatgggatatatataattgcacattattacata |
117 |
Q |
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| T |
34479268 |
agaagataccataaaatactaacaacactaatgtcatgaactctataatcggttggattgtttgtcatatgggatatatataattgcacattattacata |
34479169 |
T |
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| Q |
118 |
agaaagtgatgcaccatttgactttagcaatcagttactctcacacaaagttgaccatataatgacaaccataatgctatcagaatcccttaatttaatt |
217 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34479168 |
agaaagtgatgcaccatttgactttagcaatcagtaactctcacacaaagttgaccatataatgacaaccataatgctatcagaatcccttaatttaatt |
34479069 |
T |
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| Q |
218 |
acaataatgcacttcaaatttaaaaacttgtggtactgatgat |
260 |
Q |
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| T |
34479068 |
acaataatgcacttcaaatttaaaaacttgtggtacttatgat |
34479026 |
T |
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