View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13367_low_6 (Length: 381)
Name: NF13367_low_6
Description: NF13367
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13367_low_6 |
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Alignment Details
Target: chr6 (Bit Score: 301; Significance: 1e-169; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 6 - 367
Target Start/End: Complemental strand, 16422355 - 16421994
Alignment:
| Q |
6 |
agaagcataggtaaatgtaaacaacaccgcattaacaccaaatactnnnnnnnctatatctaaagttaccaatcttccagaagtgacatcagcttaagtc |
105 |
Q |
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| T |
16422355 |
agaaacataagtaaatgtaaacaacaccgcattaataccaaatactaaaaaaactatatctaaagttaccaatcttccagaagtgacatcaacttaagtc |
16422256 |
T |
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| Q |
106 |
aactctttcgcaagtagatgagtgaactttgtgggaagataatctgcatttgatccataccgaaagaatgaatttcggtagtcttgtgcattatgttctt |
205 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16422255 |
aactctttcgcaagtagatgagtgaactttgtgggaagataatctgcatttgatccataccgaaagaatgaatttcggtagtcttgtgcattatgttctt |
16422156 |
T |
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| Q |
206 |
gtagtaaaattcgctgaggagggatgaattgaggatatatcaattcttgtccatgcatgttgcgaagctcaaataggaaaatgtgactattgacatacac |
305 |
Q |
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||||||||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
16422155 |
gtagtaaaattcgctgaggagtgatgaattgaggatacatcagttcttgtccatgcatgttgcgaacctcaaataggaaaatgtgactattgacatacac |
16422056 |
T |
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| Q |
306 |
caaggtcatctatgcatcttccaacatcttgtaaaaactcccaagaacttcccatacttttg |
367 |
Q |
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||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
16422055 |
caaggtcatttatgcatcttccaatatcttgtaaaaactcccaagaacttcccatacttttg |
16421994 |
T |
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