View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13372_high_3 (Length: 344)
Name: NF13372_high_3
Description: NF13372
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13372_high_3 |
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Alignment Details
Target: chr8 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 25 - 326
Target Start/End: Original strand, 7476750 - 7477049
Alignment:
| Q |
25 |
gcatgggacattattccttcaccttaaatattttttattttnnnnnnnnggtatgcatgtttttattagaggacatgtaattgacacatcaactaataat |
124 |
Q |
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| T |
7476750 |
gcatgggacattattccttcaccttaaatatttt--attttaaaaaaa-ggtatgcatgtttttattagaggacatgtaattgacacatcaactaataat |
7476846 |
T |
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| Q |
125 |
gaatgcaagaattgccgcgttgccattaaagaattcaagaaataaaatatggtgtcgaataagatcaacacatgcatgttat-aaactctaatggcagca |
223 |
Q |
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| T |
7476847 |
gaatgcaagaattgccgcgttgccattaaagaattcaagaaataaaatatggtgtcgaataagatcaacacatgcatgttataaaactctaatggcagca |
7476946 |
T |
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| Q |
224 |
tataatattcccaaatgatcgtaacagtgatagagatgccaaagtctaatatgacataagatcatttgtttttatcaataagtattaattaattagttag |
323 |
Q |
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| T |
7476947 |
tataatattcccaaatgatcgtaacagtgatagagatgccaaagtctaatatgacataagatcatttgtttttatcaataagtattaattaattagttag |
7477046 |
T |
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