View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13374_low_22 (Length: 233)
Name: NF13374_low_22
Description: NF13374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13374_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 210
Target Start/End: Original strand, 52858654 - 52858846
Alignment:
| Q |
18 |
agagtcatcagagaaataatgttgtcccgttccaggaagaaggcgtgatcctcctatgatggcatccaccgtggtgttgaggagagagctaggtgctgaa |
117 |
Q |
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| T |
52858654 |
agagtcatcagagaaataatgttgtcccgttccaggaagaaggcgtgatcctcctatgatggcatccaccgtggtgttgaggagagagctaggtgctgaa |
52858753 |
T |
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| Q |
118 |
ccataccttgtgagacccgtttgactgatggagctctgttgttgctgagacgaagaggaagaagaagaagccgatgaggaaggtggacgatac |
210 |
Q |
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| T |
52858754 |
ccataccttgtgagacccgtttgactgatggagctctgttgttgctgagacgaagaggaagaagaagaagccgatgaggaaggtggacgatac |
52858846 |
T |
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