View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13374_low_5 (Length: 519)

Name: NF13374_low_5
Description: NF13374
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13374_low_5
NF13374_low_5
[»] chr1 (41 HSPs)
chr1 (10-503)||(30688861-30689360)
chr1 (124-209)||(30698046-30698132)
chr1 (261-355)||(52116766-52116860)
chr1 (275-352)||(40257399-40257476)
chr1 (259-329)||(24047085-24047155)
chr1 (260-353)||(9165179-9165272)
chr1 (259-322)||(17439947-17440010)
chr1 (274-356)||(17745254-17745336)
chr1 (260-326)||(43445989-43446055)
chr1 (271-359)||(19528322-19528410)
chr1 (260-352)||(31605832-31605924)
chr1 (260-352)||(51814494-51814586)
chr1 (259-314)||(6948060-6948115)
chr1 (286-329)||(10526846-10526889)
chr1 (260-347)||(36428717-36428804)
chr1 (260-311)||(45266875-45266926)
chr1 (260-353)||(15064961-15065057)
chr1 (256-350)||(33700753-33700847)
chr1 (282-323)||(12370192-12370233)
chr1 (274-331)||(15786318-15786375)
chr1 (259-355)||(50901578-50901674)
chr1 (266-354)||(15581132-15581219)
chr1 (259-351)||(44126396-44126488)
chr1 (147-197)||(30671281-30671332)
chr1 (274-329)||(31383796-31383851)
chr1 (258-352)||(2219972-2220066)
chr1 (260-354)||(16893392-16893486)
chr1 (259-329)||(25494052-25494122)
chr1 (274-352)||(36371470-36371548)
chr1 (286-352)||(45235389-45235455)
chr1 (260-329)||(8177166-8177235)
chr1 (281-329)||(1690082-1690130)
chr1 (276-352)||(6122794-6122870)
chr1 (260-352)||(8904414-8904506)
chr1 (272-352)||(16169974-16170054)
chr1 (271-323)||(17297013-17297065)
chr1 (266-310)||(26232351-26232395)
chr1 (156-203)||(30718563-30718611)
chr1 (288-352)||(31794276-31794340)
chr1 (257-329)||(42949273-42949344)
chr1 (260-352)||(46146251-46146343)
[»] chr5 (18 HSPs)
chr5 (260-352)||(16457810-16457902)
chr5 (260-329)||(30883182-30883251)
chr5 (259-354)||(29075779-29075874)
chr5 (259-352)||(21589288-21589381)
chr5 (286-354)||(8278285-8278353)
chr5 (274-329)||(16773830-16773885)
chr5 (274-348)||(12883844-12883918)
chr5 (264-325)||(84851-84912)
chr5 (259-352)||(30109292-30109384)
chr5 (286-330)||(4793098-4793142)
chr5 (260-352)||(14285161-14285253)
chr5 (260-352)||(21549121-21549213)
chr5 (274-354)||(25627055-25627135)
chr5 (292-355)||(15641808-15641871)
chr5 (286-355)||(14495815-14495884)
chr5 (260-329)||(34984829-34984898)
chr5 (260-352)||(26078035-26078127)
chr5 (265-353)||(31669014-31669101)
[»] chr8 (28 HSPs)
chr8 (259-352)||(16852340-16852433)
chr8 (260-350)||(2203494-2203584)
chr8 (259-352)||(968362-968455)
chr8 (260-352)||(28783060-28783152)
chr8 (259-351)||(29858032-29858124)
chr8 (261-352)||(19703472-19703563)
chr8 (259-329)||(6536543-6536613)
chr8 (259-352)||(8484999-8485092)
chr8 (274-355)||(23361647-23361728)
chr8 (260-352)||(26688865-26688957)
chr8 (259-329)||(40888824-40888894)
chr8 (260-357)||(18540293-18540390)
chr8 (274-350)||(3624582-3624658)
chr8 (262-354)||(6530805-6530896)
chr8 (281-353)||(23874387-23874459)
chr8 (260-352)||(30483868-30483960)
chr8 (257-329)||(35690045-35690117)
chr8 (271-326)||(3524396-3524451)
chr8 (271-314)||(36205233-36205276)
chr8 (286-352)||(5264544-5264610)
chr8 (286-352)||(6436565-6436631)
chr8 (276-354)||(11819774-11819852)
chr8 (259-305)||(28787479-28787525)
chr8 (259-352)||(18897166-18897259)
chr8 (276-353)||(27750729-27750806)
chr8 (260-353)||(33017213-33017306)
chr8 (257-329)||(15948030-15948102)
chr8 (286-318)||(35583633-35583665)
[»] chr4 (38 HSPs)
chr4 (260-352)||(55427184-55427276)
chr4 (260-354)||(19238561-19238655)
chr4 (258-352)||(51948480-51948574)
chr4 (259-352)||(21344817-21344909)
chr4 (259-352)||(39509070-39509163)
chr4 (260-355)||(37109335-37109430)
chr4 (260-328)||(23377980-23378048)
chr4 (259-329)||(30938202-30938272)
chr4 (260-354)||(46295095-46295189)
chr4 (272-353)||(47044716-47044797)
chr4 (281-329)||(17618304-17618352)
chr4 (274-329)||(13015450-13015505)
chr4 (259-305)||(7382044-7382090)
chr4 (260-326)||(32992638-32992704)
chr4 (259-353)||(33619205-33619299)
chr4 (260-353)||(5795393-5795486)
chr4 (260-329)||(7292782-7292851)
chr4 (260-329)||(49576878-49576947)
chr4 (259-327)||(2622378-2622446)
chr4 (272-352)||(37720210-37720290)
chr4 (260-324)||(46329192-46329256)
chr4 (260-352)||(51250506-51250598)
chr4 (274-329)||(7949452-7949507)
chr4 (281-352)||(24827825-24827896)
chr4 (260-354)||(8325363-8325457)
chr4 (275-329)||(13901765-13901819)
chr4 (257-327)||(37274440-37274510)
chr4 (260-326)||(37980132-37980197)
chr4 (275-349)||(41346962-41347036)
chr4 (259-329)||(49262667-49262737)
chr4 (275-352)||(4483300-4483377)
chr4 (288-353)||(9241037-9241102)
chr4 (260-329)||(16581716-16581785)
chr4 (260-353)||(28635695-28635788)
chr4 (276-329)||(38869791-38869844)
chr4 (260-353)||(44865333-44865426)
chr4 (276-352)||(8030204-8030280)
chr4 (257-297)||(22096589-22096629)
[»] chr2 (28 HSPs)
chr2 (257-352)||(7799016-7799111)
chr2 (257-352)||(19016031-19016126)
chr2 (259-352)||(39714992-39715085)
chr2 (260-352)||(37480075-37480167)
chr2 (259-329)||(21213792-21213862)
chr2 (260-352)||(42327379-42327471)
chr2 (260-326)||(30359680-30359745)
chr2 (261-326)||(12517738-12517803)
chr2 (259-352)||(29197359-29197452)
chr2 (260-352)||(26482093-26482184)
chr2 (272-352)||(29503271-29503351)
chr2 (260-313)||(17737608-17737661)
chr2 (260-352)||(42602554-42602646)
chr2 (260-355)||(41908622-41908717)
chr2 (274-328)||(4262300-4262354)
chr2 (257-327)||(33569839-33569909)
chr2 (281-351)||(37755976-37756046)
chr2 (260-353)||(16525177-16525269)
chr2 (260-329)||(30410533-30410602)
chr2 (277-318)||(30907629-30907670)
chr2 (260-353)||(40416374-40416467)
chr2 (276-329)||(42420292-42420345)
chr2 (276-317)||(42860383-42860424)
chr2 (260-352)||(42922414-42922507)
chr2 (260-352)||(3697384-3697475)
chr2 (268-304)||(4683255-4683291)
chr2 (281-329)||(28846714-28846762)
chr2 (293-329)||(41504953-41504989)
[»] chr7 (36 HSPs)
chr7 (260-356)||(22760859-22760955)
chr7 (274-354)||(30442486-30442566)
chr7 (261-355)||(43590904-43590998)
chr7 (259-352)||(2446308-2446401)
chr7 (259-352)||(19553454-19553546)
chr7 (260-353)||(26459394-26459487)
chr7 (259-353)||(48771937-48772031)
chr7 (260-353)||(5579218-5579311)
chr7 (259-352)||(27776172-27776265)
chr7 (260-353)||(39631843-39631936)
chr7 (272-328)||(7499920-7499976)
chr7 (274-329)||(20335829-20335884)
chr7 (259-313)||(42711997-42712051)
chr7 (260-329)||(11720944-11721013)
chr7 (259-328)||(23552142-23552211)
chr7 (287-352)||(25590611-25590676)
chr7 (259-328)||(26703149-26703218)
chr7 (259-352)||(38374582-38374675)
chr7 (285-353)||(25021344-25021412)
chr7 (259-354)||(3280469-3280563)
chr7 (274-329)||(7721392-7721447)
chr7 (260-327)||(17040996-17041063)
chr7 (274-329)||(17113818-17113873)
chr7 (278-329)||(28236583-28236634)
chr7 (274-329)||(43215207-43215262)
chr7 (259-330)||(49050474-49050545)
chr7 (295-349)||(20952168-20952222)
chr7 (286-352)||(23301612-23301678)
chr7 (272-329)||(15905670-15905726)
chr7 (257-326)||(22035424-22035493)
chr7 (259-352)||(30579335-30579428)
chr7 (281-353)||(7801179-7801251)
chr7 (286-350)||(21854550-21854614)
chr7 (286-350)||(29385753-29385817)
chr7 (260-352)||(31835192-31835284)
chr7 (259-311)||(37473655-37473707)
[»] scaffold0258 (1 HSPs)
scaffold0258 (274-352)||(15321-15399)
[»] chr6 (22 HSPs)
chr6 (286-352)||(31623001-31623067)
chr6 (274-352)||(33549104-33549182)
chr6 (260-352)||(12188287-12188379)
chr6 (260-352)||(24334009-24334101)
chr6 (261-352)||(21418470-21418561)
chr6 (259-352)||(12234490-12234583)
chr6 (257-353)||(12633008-12633104)
chr6 (259-354)||(30127398-30127493)
chr6 (267-329)||(10338165-10338227)
chr6 (257-329)||(346554-346625)
chr6 (260-303)||(8597731-8597774)
chr6 (274-313)||(15951300-15951339)
chr6 (286-352)||(3172778-3172844)
chr6 (259-329)||(24641173-24641243)
chr6 (274-332)||(34786452-34786510)
chr6 (286-351)||(6758432-6758497)
chr6 (274-311)||(9626073-9626110)
chr6 (259-328)||(16405109-16405178)
chr6 (257-305)||(13441104-13441152)
chr6 (272-352)||(14557962-14558042)
chr6 (274-326)||(24507534-24507586)
chr6 (258-350)||(32613122-32613214)
[»] chr3 (37 HSPs)
chr3 (259-352)||(8051214-8051307)
chr3 (260-354)||(40063617-40063711)
chr3 (259-329)||(47454600-47454670)
chr3 (274-327)||(10445137-10445190)
chr3 (260-325)||(44743839-44743904)
chr3 (260-329)||(47236955-47237024)
chr3 (260-353)||(51903862-51903955)
chr3 (260-352)||(31520589-31520681)
chr3 (260-352)||(37788449-37788541)
chr3 (274-352)||(10499107-10499185)
chr3 (286-352)||(21960551-21960617)
chr3 (260-329)||(4844495-4844564)
chr3 (260-329)||(4870191-4870260)
chr3 (261-354)||(14339608-14339701)
chr3 (259-352)||(36720381-36720474)
chr3 (260-329)||(53412968-53413037)
chr3 (257-349)||(30510180-30510272)
chr3 (276-352)||(53956384-53956460)
chr3 (281-352)||(9557320-9557391)
chr3 (271-326)||(16900676-16900731)
chr3 (274-329)||(28531056-28531111)
chr3 (270-313)||(33861728-33861771)
chr3 (266-317)||(35111215-35111266)
chr3 (259-329)||(2667885-2667955)
chr3 (259-329)||(12761535-12761605)
chr3 (259-353)||(14186647-14186740)
chr3 (260-318)||(20501730-20501788)
chr3 (290-328)||(27259185-27259223)
chr3 (259-329)||(32651421-32651491)
chr3 (260-329)||(8853783-8853852)
chr3 (307-352)||(9832497-9832542)
chr3 (260-352)||(5499391-5499483)
chr3 (256-352)||(16354872-16354968)
chr3 (260-352)||(26871488-26871580)
chr3 (260-352)||(27093345-27093437)
chr3 (260-352)||(30232330-30232422)
chr3 (261-329)||(47279389-47279457)
[»] scaffold0002 (1 HSPs)
scaffold0002 (256-329)||(94951-95024)
[»] scaffold0291 (1 HSPs)
scaffold0291 (268-352)||(2462-2546)
[»] scaffold0118 (1 HSPs)
scaffold0118 (274-354)||(41631-41711)
[»] scaffold0299 (1 HSPs)
scaffold0299 (274-329)||(11551-11606)
[»] scaffold0180 (1 HSPs)
scaffold0180 (274-329)||(19960-20015)
[»] scaffold0009 (1 HSPs)
scaffold0009 (275-353)||(19846-19924)
[»] scaffold0074 (1 HSPs)
scaffold0074 (274-331)||(45757-45814)
[»] scaffold0032 (1 HSPs)
scaffold0032 (259-352)||(112282-112375)
[»] scaffold0368 (1 HSPs)
scaffold0368 (257-329)||(14946-15017)
[»] scaffold0337 (1 HSPs)
scaffold0337 (274-326)||(1779-1831)
[»] scaffold0065 (1 HSPs)
scaffold0065 (274-326)||(12215-12267)
[»] scaffold0039 (1 HSPs)
scaffold0039 (257-305)||(92263-92311)


Alignment Details
Target: chr1 (Bit Score: 412; Significance: 0; HSPs: 41)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 412; E-Value: 0
Query Start/End: Original strand, 10 - 503
Target Start/End: Complemental strand, 30689360 - 30688861
Alignment:
Q  10 acatcatcacttaatccgcttcagcatattgtttaggttttgaccaattatttttcctaaatgagaaacaaaatttgagctcaaaagagtac------ta 103  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||      ||    
T  30689360 acatcatcacttaatccgcttcagcatattgtttaggttttgtccaattatttttcctaaatgagaaacaaaatttgagctcaaaagagtacgagtagta 30689261  T
Q  104 gtattcatttaacatataaaaacatgacaagtaccttaatgcaaatagacagtattaagacaaagtcatacatttagggcatacaatgtgccaacacata 203  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  30689260 gtattcattgaacatataaaaacatgacaagtaccttaatgcaaatagacagtattaagacaaagacatacatttaggacatacaatgtgccaacacata 30689161  T
Q  204 cccttaaacatgcccttgaaaaatctacctagttctccaaattctttttgttccttaaattggcactggggagaattgaacatgagacctcgaggaggag 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30689160 cccttaaacatgcccttgaaaaatctacctagttctccaaattcttactgttccttaaattggcactggggagaattgaacatgagacctcaaggaggag 30689061  T
Q  304 caaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaattcttattgttccgtataagagtgagccatgaagtgtgaaataataata 403  Q
    |||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30689060 caaactcccaggtcctaagccaataccatcagggcaacctaagtgggttaattcttattgttccgtataagagtgagccatgaagtgtgaaataataata 30688961  T
Q  404 ctcaggcaggnnnnnnngtgtgtgaaattcaagtgtgagccatgaagtcctatattagttcataaccttaattagtgaaggagacaataagagtgaaatt 503  Q
    ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30688960 ctcaggcaggtttttttgtgtgtgaaattcaagtgtgagccatgaagtcctatattagttcataaccttaattagtgaaagagacaataagagtgaaatt 30688861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 30698132 - 30698046
Alignment:
Q  124 aacatgacaagtaccttaatgcaaatagacagtattaagacaaagtcat-acatttagggcatacaatgtgccaacacataccctta 209  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| |||| ||||||||||||||||||||||    
T  30698132 aacatgacaagtaccttaatgcaaatagacagtatttagacaaagacatcacatttaggacataaaatgtgccaacacataccctta 30698046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 261 - 355
Target Start/End: Original strand, 52116766 - 52116860
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    |||||||||| ||||||||||||| |||||| | ||||||||||| ||||||| |||| |||||||||| | | || |||||||| |||||||||    
T  52116766 aattggcactagggagaattgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggttaat 52116860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 275 - 352
Target Start/End: Complemental strand, 40257476 - 40257399
Alignment:
Q  275 agaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| |||||||||||||||||||| |||||||||||  |||||||||| | | || |||||||||||||||    
T  40257476 agaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 40257399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 24047085 - 24047155
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||||||||||||| |||| ||| |||||||||||||||| ||||||| |||  ||||||||||    
T  24047085 taaattggcactggggagaatcgaacttgaaacctcgaggaggagcacactcccaagtctcaagccaatac 24047155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 9165179 - 9165272
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||  | ||||||||||| |||||| | ||||||||||| |||||||||||| |||||||||| |   || ||||||||||||||||    
T  9165179 aaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 9165272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 322
Target Start/End: Complemental strand, 17440010 - 17439947
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaag 322  Q
    ||||||| |||||| ||||||  |||||||||||||||||||||||| |||||||| |||||||    
T  17440010 taaattgacactggagagaatcaaacatgagacctcgaggaggagcacactcccagatcctaag 17439947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 274 - 356
Target Start/End: Original strand, 17745254 - 17745336
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaatt 356  Q
    |||||| ||||||||||||||||||||||||| || | ||||||| |||||||||| |   || ||||||||||| |||||||    
T  17745254 gagaatcgaacatgagacctcgaggaggagcacacgctcaggtcccaagccaataccactaggccaacccaagtgcgttaatt 17745336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 43446055 - 43445989
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||||||| ||||||||| ||||||||||||| ||||||||||| ||||| ||| || |||||||    
T  43446055 aaattggcaccggggagaatcgaacatgagaccttgaggaggagcacactccaaggacccaagccaa 43445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 19528322 - 19528410
Alignment:
Q  271 ggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaattctt 359  Q
    ||||||||| |||| |||||||| ||||||||||| ||||  || ||| |||||||||| | | || ||||||||||||||| ||||||    
T  19528322 ggggagaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggttgattctt 19528410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 31605832 - 31605924
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| ||||||||| |||| |||||||| ||||||||||| ||| | |||||| ||||||| || ||| || ||||  |||||||||    
T  31605832 aaattggcaccggggagaatcgaacttgagaccttgaggaggagcacacttcaaggtcccaagccaacaccatcaggccaacataagtgggtt 31605924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 51814586 - 51814494
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| || |||||| |||| |||||||| ||||||||||| |||| ||| ||  ||| |||||| ||| || |||||||||||||||    
T  51814586 aaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaagtcaataccatcaggccaacccaagtgggtt 51814494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 314
Target Start/End: Original strand, 6948060 - 6948115
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccag 314  Q
    ||||||| ||| || ||||||||||||||||||||||||||| |||| ||||||||    
T  6948060 taaattgacaccggtgagaattgaacatgagacctcgaggagcagcacactcccag 6948115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 329
Target Start/End: Complemental strand, 10526889 - 10526846
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||| |||||||||||||||||||||||| ||||||||||    
T  10526889 tgagaccttgaggaggagcaaactcccaggtcccaagccaatac 10526846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 347
Target Start/End: Complemental strand, 36428804 - 36428717
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagt 347  Q
    |||||||||| |||||||||  |||||||||||| ||||||||||| ||||| |||| | ||||||| || | | || ||||||||||    
T  36428804 aaattggcaccggggagaatcaaacatgagaccttgaggaggagcatactccaaggtaccaagccaacaccacccggccaacccaagt 36428717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 260 - 311
Target Start/End: Complemental strand, 45266926 - 45266875
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcc 311  Q
    |||||||||| ||||||||| |||| |||||||| |||||||||||||||||    
T  45266926 aaattggcaccggggagaatcgaacctgagaccttgaggaggagcaaactcc 45266875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 15065057 - 15064961
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcct---aagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||| ||| ||||| |||||||| |||||||| ||||| ||||| |||| ||||||||   |||||||||  ||| || ||||||||||||||||    
T  15065057 aaattgacaccggggaaaattgaacctgagaccttgaggatgagcacactctcaggtcctaagaagccaatatcatcaggccaacccaagtgggtta 15064961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 256 - 350
Target Start/End: Original strand, 33700753 - 33700847
Alignment:
Q  256 ccttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtggg 350  Q
    ||||||||||||||  | |||||| |||| |||||||| ||||||||||| |||||||| | | |||||||||| |   || |||||||||||||    
T  33700753 ccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggccaacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 323
Target Start/End: Complemental strand, 12370233 - 12370192
Alignment:
Q  282 aacatgagacctcgaggaggagcaaactcccaggtcctaagc 323  Q
    |||||||||||||||||||||||| |||||||||||| ||||    
T  12370233 aacatgagacctcgaggaggagcacactcccaggtcccaagc 12370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 331
Target Start/End: Original strand, 15786318 - 15786375
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatacta 331  Q
    |||||| |||| |||||||| ||||||||||| |||||||| ||| ||||||||||||    
T  15786318 gagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatacta 15786375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 355
Target Start/End: Complemental strand, 50901674 - 50901578
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa-tactatcggggcaacccaagtgggttaat 355  Q
    ||||||||||||| | ||||| |||  |||||||||||||||||||| ||| |||||||| ||||||| ||| |   || ||||||||||||||||||    
T  50901674 taaattggcactgag-agaatcgaatttgagacctcgaggaggagcacactaccaggtcccaagccaattaccactaggccaacccaagtgggttaat 50901578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 354
Target Start/End: Original strand, 15581132 - 15581219
Alignment:
Q  266 gcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||| |||||||||||||| ||||||||  || ||||||| ||||| |||||| ||||||| || | | || |||||||||||||||||    
T  15581132 gcaccggggagaattgaacctgagacctttag-aggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggttaa 15581219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 351
Target Start/End: Complemental strand, 44126488 - 44126396
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggt 351  Q
    |||||||||||| | ||||||  ||  |||||||||| ||||||||| |||||||||||| | | |||||| | | || ||||||||||||||    
T  44126488 taaattggcactagagagaatcaaatctgagacctcgtggaggagcacactcccaggtcccaggtcaataccaccaggccaacccaagtgggt 44126396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 197
Target Start/End: Complemental strand, 30671332 - 30671281
Alignment:
Q  147 aatagacagtattaagacaaagtcata-catttagggcatacaatgtgccaa 197  Q
    |||||||||||||||||||||| |||| |||||||| ||| |||||||||||    
T  30671332 aatagacagtattaagacaaagacatagcatttaggacattcaatgtgccaa 30671281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 31383796 - 31383851
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| ||||||| | |||||||||| |||||||||||| ||||||||||    
T  31383796 gagaatcgaacctgagaccccaaggaggagcacactcccaggtcccaagccaatac 31383851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 2220066 - 2219972
Alignment:
Q  258 ttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| || ||| |||||| |||| ||||||||||||||| |||| |||  ||||| | |||||||||| | | |  |||||||||||||||    
T  2220066 ttaaattgacattggagagaatcgaacctgagacctcgaggagaagcacactttcaggttccaagccaataccaccagaacaacccaagtgggtt 2219972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 16893486 - 16893392
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||| ||| || || ||| |||| |||||||||||||||||| | |||||||  ||  |||||||||| | | || |||||||||||||||||    
T  16893486 aaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaagccaataccaacaggtcaacccaagtgggttaa 16893392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 25494052 - 25494122
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||| |||| |||||||  ||||  |||||||||||||| |||||||||| || ||| ||||||||||    
T  25494052 taaattgtcactagggagaagcgaactcgagacctcgaggagaagcaaactcctagatcccaagccaatac 25494122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 36371548 - 36371470
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||| | |||||| ||||||||||| |||||||||| | |||||||||| |   || |||||||||||||||    
T  36371548 gagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 36371470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 45235389 - 45235455
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||| |||||||||||||| ||||||| |||| || ||||||| ||| |  |||||||||||||||    
T  45235389 tgagatctcgaggaggagcacactcccaagtcccaaaccaataccatcagaccaacccaagtgggtt 45235455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 8177166 - 8177235
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||  | |||||| |||| ||| |||| ||||||||||| |||||||| ||| ||||||||||    
T  8177166 aaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatcccaagccaatac 8177235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 1690082 - 1690130
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||| ||||||||| ||||||| || |||||||||||| ||||||||||    
T  1690082 gaacttgagacctcaaggaggaacagactcccaggtcccaagccaatac 1690130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 6122870 - 6122794
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||| |||| |||||||| ||||||||||| ||||||| |||| ||||| |||| |   ||||||||||| ||||||    
T  6122870 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggtt 6122794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 8904506 - 8904414
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  | |||||| |||| |||||||| ||||||||||| |||| ||  ||| ||| ||||||||   || |||||||||||||||    
T  8904506 aaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactcacatatcccaagtcaatactactaggccaacccaagtgggtt 8904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 16169974 - 16170054
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| |||| ||| |||| |||||||| || |||||||||||| ||| |||||| | | ||  ||||||||||||||    
T  16169974 gggagaatcgaacctgaaaccttgaggaggaacacactcccaggtcccaagtcaataccaccaggctaacccaagtgggtt 16170054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 323
Target Start/End: Complemental strand, 17297065 - 17297013
Alignment:
Q  271 ggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagc 323  Q
    |||||||||  |||||||||||| ||||||||||| ||||| |||||| ||||    
T  17297065 ggggagaatcaaacatgagaccttgaggaggagcacactccaaggtcccaagc 17297013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 310
Target Start/End: Original strand, 26232351 - 26232395
Alignment:
Q  266 gcactggggagaattgaacatgagacctcgaggaggagcaaactc 310  Q
    ||||||| ||||||||||| ||||||||| |||||||||| ||||    
T  26232351 gcactggagagaattgaacctgagacctcaaggaggagcacactc 26232395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 203
Target Start/End: Complemental strand, 30718611 - 30718563
Alignment:
Q  156 tattaagacaaagtcata-catttagggcatacaatgtgccaacacata 203  Q
    ||||||||||||| |||| |||||||| ||||||||||||||| |||||    
T  30718611 tattaagacaaagacataacatttaggacatacaatgtgccaatacata 30718563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 288 - 352
Target Start/End: Original strand, 31794276 - 31794340
Alignment:
Q  288 agacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| ||||||||||| ||||||| |||| |||||||||| |   || |||||||||||||||    
T  31794276 agaccttgaggaggagcacactcccaagtcccaagccaataccactaggccaacccaagtgggtt 31794340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 42949273 - 42949344
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||| ||| || ||||||  || ||||||||||||||||||||| ||||| ||||  |||||||||||    
T  42949273 cttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcctaggt-ttaagccaatac 42949344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 46146251 - 46146343
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| | ||| |||||||| |||||| | || | |||||| | |||||| ||| |||| ||||| |||||  |||||||||||||||    
T  46146251 aaattggcaccgaggaaaattgaacctgagactttgaaggggagcacattcccagatcccaagctaataccatcggaccaacccaagtgggtt 46146343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 3e-21; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 16457902 - 16457810
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||| ||||| |||||| |||||||||| | | || ||||| |||||||||    
T  16457902 aaattggcaccggggagaattgaacatgagaccttgaggaggagcacactccaaggtcccaagccaataccaccaggccaacctaagtgggtt 16457810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 30883182 - 30883251
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||||| ||||||||||| |||||||| ||||||||||| |||||||||||| ||||||||||    
T  30883182 aaattgacactggtgagaattgaacttgagaccttgaggaggagcacactcccaggtcccaagccaatac 30883251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 29075874 - 29075779
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||||||||  | |||||| |||||||||| |||||||||||||| |||||||| ||| |||||||||| |   ||  ||||||||||||||||    
T  29075874 taaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggttaa 29075779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 21589381 - 21589288
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||  | | |||| |||| |||||| |||||||| |||| |||||||||||| |||||||||| | | || |||||||||||||||    
T  21589381 taaattggcaccagagggaatcgaacctgagacatcgaggagtagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 21589288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 354
Target Start/End: Original strand, 8278285 - 8278353
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    ||||| |||||||||||||| ||||||| |||| |||||||||| ||| |  |||||||||||||||||    
T  8278285 tgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggttaa 8278353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 16773885 - 16773830
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||||||||||||||| |||||||||||| ||| ||||||    
T  16773885 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaatac 16773830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 348
Target Start/End: Complemental strand, 12883918 - 12883844
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtg 348  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||| || | ||||| ||| || ||| |||||||    
T  12883918 gagaattgaacatgagacctcaaggaggagcacactcccagatcccaacctaataccatcaggtcaatccaagtg 12883844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 84912 - 84851
Alignment:
Q  264 tggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagcca 325  Q
    |||||| ||||||||| |||| |||||||| ||||||||||| |||||||| ||| ||||||    
T  84912 tggcaccggggagaatcgaacttgagaccttgaggaggagcacactcccagatcccaagcca 84851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 30109292 - 30109384
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||| |||| |||| |||| ||||||||| |||||||||| |||||||||||  |||||||||| | |  | |||||||||||||||    
T  30109292 taaattagcaccgggg-gaatcgaacctgagacctcaaggaggagcacactcccaggtcacaagccaataccaccaagccaacccaagtgggtt 30109384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 330
Target Start/End: Original strand, 4793098 - 4793142
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatact 330  Q
    |||||||||||||||||||| |||||||||||| || ||||||||    
T  4793098 tgagacctcgaggaggagcacactcccaggtcccaaaccaatact 4793142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 14285253 - 14285161
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  | |||||| |||| |||||||| ||||||||||| |||||||||| | |||||||| | |   || |||||||||||||||    
T  14285253 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggttccaagccaattccactcggccaacccaagtgggtt 14285161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 21549121 - 21549213
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| | || ||| |||| |||||| |  |||||||||| |||||||||||| |||||||||| |   || |||||||||||||||    
T  21549121 aaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 25627135 - 25627055
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||| |||| |||||||| ||||||||||| ||||||| || | |||||||||| |   || |||||||||||||||||    
T  25627135 gagaatcgaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggttaa 25627055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 292 - 355
Target Start/End: Original strand, 15641808 - 15641871
Alignment:
Q  292 ctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    |||||||| ||||| |||||||||||| ||| |||||| |||||| ||||| |||||| |||||    
T  15641808 ctcgaggacgagcacactcccaggtcccaagtcaataccatcgggccaaccaaagtggattaat 15641871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 355
Target Start/End: Original strand, 14495815 - 14495884
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||| | | |  |||||||| |||||||||    
T  14495815 tgagacctcgaggaggagcacactcccagatcccaagtcaataccaccagaccaacccaaatgggttaat 14495884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 34984898 - 34984829
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||  | |||||| |||| | |||||| ||||||||||| |||||||||| | ||||||||||    
T  34984898 aaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggttccaagccaatac 34984829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 26078035 - 26078127
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| | |||||| |||| |||||||| || ||| |||| ||||||| |||| || ||||||| |   || |||||||||||||||    
T  26078035 aaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 353
Target Start/End: Original strand, 31669014 - 31669101
Alignment:
Q  265 ggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||| ||||||||| |||| | |||||| ||| ||||||| ||||| |||||| ||||||| || ||| |  ||||||||||||||||    
T  31669014 ggcaccggggagaatcgaacctaagaccttgag-aggagcagactccaaggtcccaagccaacaccatcagaccaacccaagtgggtta 31669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 16852433 - 16852340
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||||  ||||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| |   || |||||||||||||||    
T  16852433 taaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 16852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 2203584 - 2203494
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtggg 350  Q
    |||||||||| |||||||||||| | |||||||| ||||||||||| |||||||||||| |||||||||| |   || |||||||||||||    
T  2203584 aaattggcaccggggagaattgaccctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 2203494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 968455 - 968362
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  || |||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| | | || |||| ||||||||||    
T  968455 taaattggcatcggagagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccaggccaactcaagtgggtt 968362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 28783152 - 28783060
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| | ||||||| ||||||||||||| ||||||||||| |||||||||||  |||||||||| | |  | |||||||||||||||    
T  28783152 aaattggcaccgaggagaatcgaacatgagaccttgaggaggagcacactcccaggtctcaagccaataccaccaagccaacccaagtgggtt 28783060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 351
Target Start/End: Original strand, 29858032 - 29858124
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggt 351  Q
    ||||||||||| | || |||| |||| |||||||||||||||||||| |||||| ||||| |||||||||| | | || ||| ||||||||||    
T  29858032 taaattggcaccgaggggaatcgaacctgagacctcgaggaggagcacactccctggtcccaagccaataccaccaggccaatccaagtgggt 29858124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 352
Target Start/End: Original strand, 19703472 - 19703563
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||| |||| |||||||| |||| |||||||| ||||||||||| |||| ||||||| |||||||||| |   || |||||||||||||||    
T  19703472 aattgacactagggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggtt 19703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 6536613 - 6536543
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||||  | ||||||||||| |||||||| ||||||||||| ||||| |||||| ||||||||||    
T  6536613 taaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatac 6536543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 8485092 - 8484999
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| || |||||| ||| |||||||||| | |||||||| |||| ||||||| |||| ||||| | | || |||||||||||||||    
T  8485092 taaattggcaccggagagaatcgaaaatgagacctcaaagaggagcacactcacaggtcccaagcaaataccaccaggccaacccaagtgggtt 8484999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 23361647 - 23361728
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    ||||||||||| |||||||| ||||||||||| |||||||  ||| ||| |||||| | | || ||||||||||||||||||    
T  23361647 gagaattgaacctgagaccttgaggaggagcacactcccatatcccaagtcaataccaccaggtcaacccaagtgggttaat 23361728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 26688957 - 26688865
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||| || |||| ||||| |||||||| ||||||||||| ||||| |||||| ||||||| || | | || |||||||||||||||    
T  26688957 aaattgacactaggaagaactgaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26688865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 40888894 - 40888824
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||| | |||||||||||||| | |||| |||||||||||||||||  ||| | ||||||||||    
T  40888894 taaattggcacagaggagaattgaacataaaaccttgaggaggagcaaactccagggttccaagccaatac 40888824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 357
Target Start/End: Complemental strand, 18540390 - 18540293
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaattc 357  Q
    ||||||||||  | |||||| |||| |||||||| |||||| || | |||||||||||| |||||||||| |   || ||||||||||||||| ||||    
T  18540390 aaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactaggccaacccaagtgggttcattc 18540293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 350
Target Start/End: Complemental strand, 3624658 - 3624582
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtggg 350  Q
    |||||| |||| |||||||| || |||||||| |||||||||||| |||||||||| |   || |||||||||||||    
T  3624658 gagaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 354
Target Start/End: Complemental strand, 6530896 - 6530805
Alignment:
Q  262 attggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||||| ||||||||| |||| |||||| | ||| ||||||| ||||| |||||| ||||||| || | | || |||||||||||||||||    
T  6530896 attggcaccggggagaatcgaacctgagacattgag-aggagcacactcctaggtcccaagccaacaccaccaggccaacccaagtgggttaa 6530805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 353
Target Start/End: Original strand, 23874387 - 23874459
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||| |||||||||||||||| ||| | |||||||||| |||||||||| |   || ||||||||||||||||    
T  23874387 gaacctgagacctcgaggaggcgcagattcccaggtcccaagccaataccactaggccaacccaagtgggtta 23874459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 30483868 - 30483960
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  | ||||||||||| ||||||   ||||||||||| |||||||  ||| |||||||||| |  ||| |||||||||||||||    
T  30483868 aaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 35690045 - 35690117
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||| |||  | |||||| |||| |||||||| |||||||||||||| ||||| ||| ||||||||||    
T  35690045 cttaaattgacaccagagagaatcgaacctgagaccttgaggaggagcaaacacccagatcccaagccaatac 35690117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 3524396 - 3524451
Alignment:
Q  271 ggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||||||||||| | |||||| ||||||||||| ||||| |||||| |||||||    
T  3524396 ggggagaattgaacctaagaccttgaggaggagcacactccaaggtcccaagccaa 3524451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 36205276 - 36205233
Alignment:
Q  271 ggggagaattgaacatgagacctcgaggaggagcaaactcccag 314  Q
    ||||||||| ||||||||||||| ||||||||||| ||||||||    
T  36205276 ggggagaatcgaacatgagaccttgaggaggagcacactcccag 36205233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 5264610 - 5264544
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||||||||||| | |||||||| | |||||||||| |   || |||||||||||||||    
T  5264610 tgagacctcgaggaggagcacattcccaggttccaagccaataccactaggccaacccaagtgggtt 5264544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 6436565 - 6436631
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| | ||||||||| ||||| | |||| |||||||||| | | ||||||||||||||||||    
T  6436565 tgagaccttgcggaggagcacactcctaagtcccaagccaataccaccagggcaacccaagtgggtt 6436631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 11819852 - 11819774
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||| |||| |||||||| ||||||||||| ||||||| |||| ||||| |||| |   ||||||||||| ||||||||    
T  11819852 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaacccaaatgggttaa 11819774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 305
Target Start/End: Original strand, 28787479 - 28787525
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagca 305  Q
    |||||||||||||||||||||  ||| |||||||| |||||||||||    
T  28787479 taaattggcactggggagaatcaaacctgagaccttgaggaggagca 28787525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 18897259 - 18897166
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||  || ||||| ||||||||||||| ||||||||||| ||||  |||||| || |||| || |   || |||||||||||||||    
T  18897259 taaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggccaacccaagtgggtt 18897166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 353
Target Start/End: Complemental strand, 27750806 - 27750729
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||| |||| |||||||| ||||||||||| ||||||| |||| ||||| |||| |   ||||||||||| |||||||    
T  27750806 gaatcgaacctgagaccttgaggaggagcacactcccaagtcccaagcctataccacgagggcaacccaaatgggtta 27750729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 33017306 - 33017213
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||  | |||||| |||| |||||||| ||||||||||| ||| |||||| | |||||||||  |   || ||||||||||||||||    
T  33017306 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccaggttccaagccaatatgacaaggccaacccaagtgggtta 33017213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 15948030 - 15948102
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| || |||||| |||||| |||| |  ||| ||||||||||||| ||||||| |||| ||||||||||    
T  15948030 cttaaaatgacactggagagaatcgaacctatgacatcgaggaggagcatactcccaagtcccaagccaatac 15948102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 318
Target Start/End: Complemental strand, 35583665 - 35583633
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcc 318  Q
    |||||||||||||||||||||||||||| ||||    
T  35583665 tgagacctcgaggaggagcaaactcccaagtcc 35583633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 8e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 55427184 - 55427276
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| | ||||||| |||| |||||||||||| ||||||| |||||||||||| |||||||||| | | || |||||||||||||||    
T  55427184 aaattggcaccgcggagaatcgaacctgagacctcgagcaggagcagactcccaggtcccaagccaataccaccaggccaacccaagtgggtt 55427276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 19238561 - 19238655
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    ||||||| || ||||||||| ||||  ||||||||||||||||||| ||||||| |||| |||||||||| | | || |||||||||||||||||    
T  19238561 aaattggtaccggggagaatcgaacccgagacctcgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaagtgggttaa 19238655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 258 - 352
Target Start/End: Complemental strand, 51948574 - 51948480
Alignment:
Q  258 ttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| |||||| ||||||||||| |||||||||||||||| ||| ||||| || ||| ||| |||||||| | || |||||||||||||||    
T  51948574 ttaaattgacactggagagaattgaacctgagacctcgaggaggggcacactcctagatcccaagtcaatactaccaggacaacccaagtgggtt 51948480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 21344909 - 21344817
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||| ||||||||||||||||||||||||||| || |||||||| ||||| |||||| ||||||| |  ||| || |||||||||||||||    
T  21344909 taaattgacactggggagaattgaacatgagaccttga-gaggagcacactccaaggtcccaagccaacatcatcaggccaacccaagtgggtt 21344817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 39509163 - 39509070
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||| ||||||||||||| |||| |||||||||||||||||||| |||||||| ||| |||||| ||| ||  |  |||||||||||||||    
T  39509163 taaattgccactggggagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccattaccatgagaccaacccaagtgggtt 39509070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 37109335 - 37109430
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    ||||||||||  | |||||| |||| |||||||| ||||||||||| |||||||||||| |||||||||| |   || ||||||||||||||||||    
T  37109335 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggttaat 37109430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 328
Target Start/End: Complemental strand, 23378048 - 23377980
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    ||||||||||| | |||||| |||| |||||||| ||||||||||| |||||||||||| |||||||||    
T  23378048 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaata 23377980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 30938202 - 30938272
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||| ||||| || ||| || |||||||    
T  30938202 taaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaaccaatac 30938272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 46295189 - 46295095
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||||||| ||||||||| |||| |||||||| ||||||||||| ||||| | |||| ||||||| |||| | |  ||||| |||||||||||    
T  46295189 aaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactccaatgtcccaagccaacactaccagaccaacctaagtgggttaa 46295095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 353
Target Start/End: Complemental strand, 47044797 - 47044716
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| ||| ||| |||||| | | || ||| ||||||||||||    
T  47044797 gggagaatcgaacctgagacctcgaggaggagcaaactctcagatcccaagtcaataccaccaggccaatccaagtgggtta 47044716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 17618352 - 17618304
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||    
T  17618352 gaacatgagacctcgaggaggagcacactcccaggtctcaagccaatac 17618304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 13015505 - 13015450
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| ||||||||||| ||||||||||||| ||||||| |||| ||||||||||    
T  13015505 gagaatcgaacatgagacttcgaggaggagcacactcccaagtcccaagccaatac 13015450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 305
Target Start/End: Complemental strand, 7382090 - 7382044
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagca 305  Q
    |||||||||||||||||||||||||| ||||||||||| | ||||||    
T  7382090 taaattggcactggggagaattgaacctgagacctcgacgcggagca 7382044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 32992704 - 32992638
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||| ||| ||||||||| |||| |||||||| ||||||||||| ||||| |||||| |||||||    
T  32992704 aaattgacaccggggagaatcgaacttgagaccttgaggaggagcacactccaaggtcccaagccaa 32992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 33619299 - 33619205
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||| |  |||||| |||| | ||||||| ||||||| ||  ||||||| |||||||||||||| | |  ||||||||||||||||||    
T  33619299 taaattggcaccgaagagaatcgaacctaagacctcaaggaggaccacgctcccagatcctaagccaataccaccaaggcaacccaagtgggtta 33619205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 5795393 - 5795486
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||||||||||||  ||| |||||||| ||||||||||| ||||| |||| | ||| ||| || | | |  ||||||||||||||||    
T  5795393 aaattggcactggggagaatcaaacctgagaccttgaggaggagcatactccaaggtgccaagtcaacaccaccagaccaacccaagtgggtta 5795486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 7292782 - 7292851
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||| | |||||| |||| |||||| | ||||||||||| |||||||||| | ||||||||||    
T  7292782 aaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccaggttccaagccaatac 7292851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 49576878 - 49576947
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| || ||| |||||| |||| |||||||| ||||||||||| ||||||| |||| ||||||||||    
T  49576878 aaattgacattggagagaatcgaacctgagaccttgaggaggagcacactcccaagtccaaagccaatac 49576947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 2622378 - 2622446
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaat 327  Q
    |||||||||||  | |||||| |||| |||||| | ||||||||||| |||||||||||| ||||||||    
T  2622378 taaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccaggtcccaagccaat 2622446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 352
Target Start/End: Original strand, 37720210 - 37720290
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| |||| || ||||| ||||||| ||| |||||||||||| |||||||||  | | || |||||||||||||||    
T  37720210 gggagaatcgaacctgggaccttgaggaggggcacactcccaggtcccaagccaataacaccaggccaacccaagtgggtt 37720290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 324
Target Start/End: Complemental strand, 46329256 - 46329192
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagcc 324  Q
    |||||||||| ||| ||||| |||| ||| |||| ||||||||||| |||||||||||| |||||    
T  46329256 aaattggcaccgggaagaatcgaacctgataccttgaggaggagcacactcccaggtcccaagcc 46329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 51250506 - 51250598
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| || | |||| |||| ||||| || |||| |||||| |||||||| ||| |||||||||| | | || |||||||||||||||    
T  51250506 aaattggcaccggagggaatcgaacttgagatcttgaggcggagcacactcccagatcccaagccaataccaccaggccaacccaagtgggtt 51250598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 7949452 - 7949507
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||| ||||||||||| ||||| |||||| ||||||||||    
T  7949452 gagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 7949507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 24827896 - 24827825
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||| |||||||||||||||||||  |||||||||||| ||| |||||| | |||  ||||| |||||||||    
T  24827896 gaacctgagacctcgaggaggagcgcactcccaggtcccaagtcaataccaccggaccaaccaaagtgggtt 24827825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 354
Target Start/End: Original strand, 8325363 - 8325457
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||| ||| ||||||||| |||| | |||||| ||||| ||||| ||||| |||||  ||||||| || | |||  |||||||||||||||||    
T  8325363 aaattgacaccggggagaatcgaacctaagaccttgaggatgagcacactccaaggtctcaagccaacaccaccggcccaacccaagtgggttaa 8325457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 13901819 - 13901765
Alignment:
Q  275 agaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| ||||||||| ||||||| || |||||||||||  ||||||||||    
T  13901819 agaattgaacttgagacctcaaggaggaacacactcccaggtctcaagccaatac 13901765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 37274440 - 37274510
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaat 327  Q
    |||||||| ||||  | |||||| |||| | |||||| ||||||||||| |||||||||||| ||||||||    
T  37274440 cttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccaggtcccaagccaat 37274510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 326
Target Start/End: Original strand, 37980132 - 37980197
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||| ||||||||||||| |||| |||||||| || |||||||| ||||| |||||| |||||||    
T  37980132 aaattgacactggggagaatcgaacctgagaccttga-gaggagcacactccaaggtcccaagccaa 37980197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 349
Target Start/End: Original strand, 41346962 - 41347036
Alignment:
Q  275 agaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgg 349  Q
    ||||| |||| |||||| ||||||||||||| |||||||| ||  || ||||||| ||| || ||||||||||||    
T  41346962 agaatcgaacctgagacttcgaggaggagcatactcccagatctcaaaccaataccatcaggccaacccaagtgg 41347036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 49262667 - 49262737
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||||||||||||| |||| ||||||||| |  ||||||| |||| || |||| |||| |||||    
T  49262667 taaattggcactggggagaatcgaacctgagacctcaacaaggagcacactctcaagtcccaagcgaatac 49262737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 352
Target Start/End: Original strand, 4483300 - 4483377
Alignment:
Q  275 agaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| |||||||| |||||||| || |||| ||||||| ||| ||||| |  | || |||||||||||||||    
T  4483300 agaattgaacctgagaccttgaggaggatcagactctcaggtcccaagtcaatattgacaggccaacccaagtgggtt 4483377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 288 - 353
Target Start/End: Original strand, 9241037 - 9241102
Alignment:
Q  288 agacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||||||| ||||||| ||| |||| ||| |||||||||| | | || ||||||||||||||||    
T  9241037 agacctcgagcaggagcacactaccagatcccaagccaataccaccaggccaacccaagtgggtta 9241102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 16581785 - 16581716
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||  | || ||| |||| |||||||| ||||||||||| |||||||||| | ||||||||||    
T  16581785 aaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccaggttccaagccaatac 16581716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 28635788 - 28635695
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||  | |||||| |||| | ||||||| |||||||||| |||||||| ||| ||| || ||| | | || ||||||||||||||||    
T  28635788 aaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatcccaagtcagtaccaccaggacaacccaagtgggtta 28635695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 38869844 - 38869791
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||| |||| |||||||| ||||||||||| |||||||| ||| ||||||||||    
T  38869844 gaatcgaacctgagaccttgaggaggagcacactcccagatcccaagccaatac 38869791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 44865426 - 44865333
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||||||| ||||||||| |||| | |||||| ||||||||||| ||  | ||| |  ||||||| || ||| || ||||||||||||||||    
T  44865426 aaattggcacaggggagaatcgaacctaagaccttgaggaggagcacacatcaaggactcaagccaacaccatcaggccaacccaagtgggtta 44865333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 8030204 - 8030280
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||| |||| |||||||| ||||||||||| ||||||| |||| ||||| |||| |   |||||| |||||||||||    
T  8030204 gaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagggcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 297
Target Start/End: Original strand, 22096589 - 22096629
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgag 297  Q
    |||||||||||||| |||||||| |||| ||||||||||||    
T  22096589 cttaaattggcactagggagaatcgaacctgagacctcgag 22096629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 352
Target Start/End: Original strand, 7799016 - 7799111
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||||||| |||||| |||  ||||| |||||||||||||| ||||||| |||| |||||||||| | | || |||||||||||||||    
T  7799016 cttaaattggcactggagagaatcgaatctgagatctcgaggaggagcacactcccaagtcccaagccaataccaccaggacaacccaagtgggtt 7799111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 257 - 352
Target Start/End: Complemental strand, 19016126 - 19016031
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||||| |||||||||  ||| |||||||||||||||||||| ||||||| |||  |||||||||| ||| |  |||||||||||||||    
T  19016126 cttaaattggcaccggggagaatcaaacttgagacctcgaggaggagcacactcccaagtctcaagccaataccatcagaccaacccaagtgggtt 19016031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 39715085 - 39714992
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||  ||||||||||| |||| |||||||||||||||||||| |||||||||||| ||| |||||| | |  | |||||||||||||||    
T  39715085 taaattggtgctggggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagtcaataccaccatgccaacccaagtgggtt 39714992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 37480167 - 37480075
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||| || ||||||||| |||| |||||||| ||||||||||| |||| ||||||| |||||||||| | | || |||||||||||||||    
T  37480167 aaattgggaccggggagaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggtt 37480075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 21213862 - 21213792
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||||| || |||||||||||| ||||||||||    
T  21213862 taaattggcaccggggagaatcgaacctgagacctcaaggaggaacacactcccaggtcccaagccaatac 21213792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 42327379 - 42327471
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| |  |||||| |||| |||||||| ||||||||||| |||||||||||| |||||||||| |   || |||||||||||||||    
T  42327379 aaattggcaccgaagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 326
Target Start/End: Complemental strand, 30359745 - 30359680
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||||||||||||||||| ||| ||||||||| ||||||||||| ||||| |||||| |||||||    
T  30359745 aaattggcactggggagaatcgaa-atgagaccttgaggaggagcacactccaaggtcccaagccaa 30359680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 12517738 - 12517803
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||||||  ||||||||  |||||||||||| ||||||||||||||||| |||||| |||||||    
T  12517738 aattggcaccagggagaatcaaacatgagaccttgaggaggagcaaactccaaggtcccaagccaa 12517803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 29197359 - 29197452
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| ||| ||||| ||||||||||| || |||||||||| ||||||| |||| ||| |||||| | |  | |||||||||||||||    
T  29197359 taaattggcaccgggaagaatcgaacatgagacatcaaggaggagcacactcccaagtcccaagtcaataccaccaagccaacccaagtgggtt 29197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 26482184 - 26482093
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||| ||||||| |||| |||||||| || |||||||| ||||| |||||| ||||||| || ||| || ||||| |||||||||    
T  26482184 aaattggcactgaggagaatcgaacctgagaccttga-gaggagcacactcctaggtcccaagccaacaccatcaggccaacctaagtgggtt 26482093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 29503351 - 29503271
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| |||| |||||||| ||||||||||| |||||||||||| || ||||||| |   || |||||||||||||||    
T  29503351 gggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggtt 29503271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 313
Target Start/End: Original strand, 17737608 - 17737661
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactccca 313  Q
    ||||||||||| |||| ||| ||||||||||||| ||||||||||| |||||||    
T  17737608 aaattggcactagggataatcgaacatgagaccttgaggaggagcacactccca 17737661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 42602646 - 42602554
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| || ||||||  ||| | |||||| ||| ||||||| |||||||||||| |||||||||| |   || |||||||||||||||    
T  42602646 aaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42602554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 41908622 - 41908717
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    |||||||||| ||||| ||| |||| |||||||| ||||||||||| ||||| |||||  || || | || | | || ||||||||||||||||||    
T  41908622 aaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccaggccaacccaagtgggttaat 41908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 328
Target Start/End: Original strand, 4262300 - 4262354
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    |||||| |||| |||||||| ||||||||||| ||| |||||||| |||||||||    
T  4262300 gagaatcgaacctgagaccttgaggaggagcacactgccaggtcccaagccaata 4262354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 257 - 327
Target Start/End: Original strand, 33569839 - 33569909
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaat 327  Q
    |||||||| ||||  | |||||| |||| |||||||||||||| ||||| ||| ||| |||||||||||||    
T  33569839 cttaaattagcaccagagagaatcgaacctgagacctcgaggaagagcacacttccaagtcctaagccaat 33569909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 351
Target Start/End: Original strand, 37755976 - 37756046
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggt 351  Q
    |||| |||||||||||| ||||||| | |||||||||| |||||||||| | |  | ||||||||||||||    
T  37755976 gaacttgagacctcgagtaggagcacattcccaggtcccaagccaataccaccaagccaacccaagtgggt 37756046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 16525269 - 16525177
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||||||| ||||||||| |||| |||||||| ||| ||  ||| ||||| | |||| ||||||| || ||| || ||||||||||||||||    
T  16525269 aaattggcaccggggagaatcgaacctgagaccttgag-agtcgcacactccaacgtcccaagccaacaccatcaggccaacccaagtgggtta 16525177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 30410533 - 30410602
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||  | || ||| ||||||||| ||| ||||||||||| ||||| |||||| ||||||||||    
T  30410533 aaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcctaggtcccaagccaatac 30410602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 318
Target Start/End: Original strand, 30907629 - 30907670
Alignment:
Q  277 aattgaacatgagacctcgaggaggagcaaactcccaggtcc 318  Q
    ||||||||||||||| ||||||||||||| ||||||| ||||    
T  30907629 aattgaacatgagacgtcgaggaggagcacactcccaagtcc 30907670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 40416374 - 40416467
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||  | |||||| |||| ||||||||  |||||||||| |||||||||| | ||| |||||| |   || ||||||||||||||||    
T  40416374 aaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccaggttccaagtcaataccactaggccaacccaagtgggtta 40416467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 329
Target Start/End: Complemental strand, 42420345 - 42420292
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||| ||||||||||||| ||| | ||||| |||| ||||||||||||||||||    
T  42420345 gaatcgaacatgagaccttgagtaagagcacactctcaggtcctaagccaatac 42420292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 317
Target Start/End: Complemental strand, 42860424 - 42860383
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtc 317  Q
    |||| |||| |||||||||||||||||||| |||||||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtc 42860383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 42922507 - 42922414
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctc-gaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  | |||||| |||| ||||||||  ||||||||||| |||||||||| | |||||||||| |   || |||||||||||||||    
T  42922507 aaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactaggccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 3697384 - 3697475
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| | ||||||| ||||  ||||||| ||| |||||||  |||| |||||| |||||||||| ||| |  |||||||||||||||    
T  3697384 aaattggcaccgaggagaatcgaaccagagaccttgag-aggagcactctccaaggtcccaagccaataccatcagaccaacccaagtgggtt 3697475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 268 - 304
Target Start/End: Complemental strand, 4683291 - 4683255
Alignment:
Q  268 actggggagaattgaacatgagacctcgaggaggagc 304  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  4683291 actggggagaattgaacttgagatctcgaggaggagc 4683255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 28846762 - 28846714
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||| |||||| ||||||||||||| |||||||||||| ||| ||||||    
T  28846762 gaacctgagacatcgaggaggagcacactcccaggtcccaagtcaatac 28846714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 41504953 - 41504989
Alignment:
Q  293 tcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||||| |||||||||||| ||||||||||    
T  41504953 tcgaggaggagcatactcccaggtcccaagccaatac 41504989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 2e-16; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 260 - 356
Target Start/End: Complemental strand, 22760955 - 22760859
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaatt 356  Q
    |||||||||  ||||||||| |||| |||||||| ||||||||||| |||||||||||| ||| |||||| | | |  |||||||||||||||||||    
T  22760955 aaattggcatcggggagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagtcaataccaccagaccaacccaagtgggttaatt 22760859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 30442566 - 30442486
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||| |||| | |||||| |||||||||||||||||||||||| |||||||||| |  ||| |||||||||||||||||    
T  30442566 gagaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggttaa 30442486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 261 - 355
Target Start/End: Complemental strand, 43590998 - 43590904
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaat 355  Q
    |||||||||| |||||||| |||| |||||| | ||||||||||| ||||||| |||| |||||||||| | | || |||||||| |||||||||    
T  43590998 aattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggttaat 43590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 2446401 - 2446308
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||| ||||| || |||||| |||| ||||| |||||||||||||| ||||||| |||| |||||||||| ||| |  |||||||||||||||    
T  2446401 taaatcggcaccggagagaatcgaacttgagatctcgaggaggagcacactcccaagtcccaagccaataccatcagaccaacccaagtgggtt 2446308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 19553546 - 19553454
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| || |||||||||||||| | |||||| ||||||||||| |||||||||||| |||||||||| | | || ||||||||| |||||    
T  19553546 taaattggaaccggggagaattgaacctaagaccttgaggaggagcacactcccaggtcc-aagccaataccaccaggccaacccaagcgggtt 19553454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 26459394 - 26459487
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||  | |||||| |||| |||||||| ||||||||||| |||||||||||| |||||||||| |   || ||||||||||||||||    
T  26459394 aaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 26459487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 48772031 - 48771937
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||||| ||| |||| ||| |||| ||||||||| |||||||||| |||||||| ||| |||||||||| | |  | ||||||||||||||||    
T  48772031 taaattggtacttgggataatcgaacctgagacctcaaggaggagcacactcccagatcccaagccaataccaccaagccaacccaagtgggtta 48771937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 5579218 - 5579311
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||||||| ||||||| |  ||| |||||||| ||||||||||| ||||| |||||| ||||||| || | | || ||||||||||||||||    
T  5579218 aaattggcaccggggagagtcaaacctgagaccttgaggaggagcacactccaaggtcccaagccaacaccaccaggtcaacccaagtgggtta 5579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 27776265 - 27776172
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||| ||||||| |||||||| |||||| ||||||||||||| |||| || |||| ||||  |||| | | || |||||||||||||||    
T  27776265 taaattggcgctggggaaaattgaacctgagacttcgaggaggagcacactctcaagtcccaagcgtataccaccaggccaacccaagtgggtt 27776172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 353
Target Start/End: Complemental strand, 39631936 - 39631843
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||||  | |||||| |||| |||||||| ||||||||||  |||||||||||| |||||||||| |   || ||||||||||||||||    
T  39631936 aaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactaggccaacccaagtgggtta 39631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 7499920 - 7499976
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    |||||||| |||| ||||||||||| ||||||||||||| ||||||| |||||||||    
T  7499920 gggagaatcgaacctgagacctcgaagaggagcaaactctcaggtcccaagccaata 7499976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 20335829 - 20335884
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||||||||||||||| ||||||| |||| ||||||||||    
T  20335829 gagaatcgaacctgagacctcgaggaggagcacactcccaagtcccaagccaatac 20335884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 259 - 313
Target Start/End: Complemental strand, 42712051 - 42711997
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactccca 313  Q
    ||||||| |||| |||||||| ||||||||||||| ||||||||||| |||||||    
T  42712051 taaattgacactagggagaatcgaacatgagaccttgaggaggagcacactccca 42711997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 11720944 - 11721013
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||||||||||||| |||  ||| ||||  |||||||||| | |||||||||| ||||||||||    
T  11720944 aaattggcactggggagaatcgaatctgataccttaaggaggagcacattcccaggtcccaagccaatac 11721013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 23552211 - 23552142
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    |||||||||| | | |||||| |||| |||||||| ||||||||||| |||||||||||| ||| |||||    
T  23552211 taaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccaggtcccaagtcaata 23552142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 352
Target Start/End: Complemental strand, 25590676 - 25590611
Alignment:
Q  287 gagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||||||||||| |||||||| ||  |||||||||| | | || |||||||||||||||    
T  25590676 gagacctcgaggaggagcacactcccagatctcaagccaataccaacaggtcaacccaagtgggtt 25590611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 26703218 - 26703149
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    |||||||||| | |||| || ||||| |||||||||||| ||||||| |||||||| ||| |||||||||    
T  26703218 taaattggcattagggataaatgaacctgagacctcgagaaggagcacactcccagatcccaagccaata 26703149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 38374582 - 38374675
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| ||||||||| |||| | |||||| ||||||||||| ||||  |||||| ||||||| || | |  | |||||||||||||||    
T  38374582 taaattggcaccggggagaatcgaacctaagaccttgaggaggagcacactctaaggtcccaagccaacaccaccacgccaacccaagtgggtt 38374675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 285 - 353
Target Start/End: Original strand, 25021344 - 25021412
Alignment:
Q  285 atgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||| | ||||||||||| |||||||||||| |||||||||| |   || ||||||||||||||||    
T  25021344 atgagactttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtta 25021412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 354
Target Start/End: Original strand, 3280469 - 3280563
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    ||||||||||| ||||| ||| |||  |||||||| ||||||||||| |||| | ||||| |||||||||| | |  | |||||||||||||||||    
T  3280469 taaattggcaccggggataatcgaat-tgagaccttgaggaggagcacactctcgggtcccaagccaataccaccatgtcaacccaagtgggttaa 3280563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 7721447 - 7721392
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| ||||||||||||| ||||||||| | |||||||||||| || |||||||    
T  7721447 gagaatcgaacatgagaccttgaggaggagtacactcccaggtcccaaaccaatac 7721392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 327
Target Start/End: Original strand, 17040996 - 17041063
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaat 327  Q
    ||||||||||| | |||||| |||| |||||||| ||||||||||| ||| |||| ||| ||||||||    
T  17040996 aaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatcccaagccaat 17041063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 17113873 - 17113818
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||| |||||| |||| |||||||||| ||||||||||||    
T  17113873 gagaatcgaacttgagaccttgaggagaagcacactcccaggttctaagccaatac 17113818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 329
Target Start/End: Original strand, 28236583 - 28236634
Alignment:
Q  278 attgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||  ||||||||||||||||||  |||||||||||| ||||||||||    
T  28236583 attgaactagagacctcgaggaggagcgcactcccaggtcccaagccaatac 28236634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 43215262 - 43215207
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||| ||||||||||| ||||| |||||| ||||||||||    
T  43215262 gagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaatac 43215207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 330
Target Start/End: Original strand, 49050474 - 49050545
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatact 330  Q
    ||||||||||| ||||||||| |||| ||||||||| |||||||| | |||| ||| ||| |||| ||||||    
T  49050474 taaattggcaccggggagaatcgaacctgagacctcaaggaggagtacactcgcagatcccaagctaatact 49050545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 20952168 - 20952222
Alignment:
Q  295 gaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgg 349  Q
    ||||||||||| |||||||||||| || ||||||| ||| || ||||||||||||    
T  20952168 gaggaggagcacactcccaggtcccaaaccaataccatcaggtcaacccaagtgg 20952222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 23301612 - 23301678
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||| |||||||||| ||||||| |||| ||| |||||| | | || |||||||||||||||    
T  23301612 tgagacctcaaggaggagcacactcccaagtcccaagtcaataccaccaggccaacccaagtgggtt 23301678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 15905670 - 15905726
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||| |||| ||||||||  |||||||||| |||||||||||| ||||||||||    
T  15905670 gggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaatac 15905726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 326
Target Start/End: Complemental strand, 22035493 - 22035424
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    ||||||||| ||| || |||||| |||| || | ||||||||||||||| |||| ||||||| |||||||    
T  22035493 cttaaattgacacaggagagaatcgaacctgggtcctcgaggaggagcacactctcaggtcccaagccaa 22035424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 30579428 - 30579335
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||  | || ||| |||| |||||||| ||||||| | | |||||||||||  |||||||||| | | || |||||||||||||||    
T  30579428 taaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccaggccaacccaagtgggtt 30579335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 7801251 - 7801179
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||| |||||||| || |||||||| |||||||||||| ||| |||||| | | || ||| ||||||||||||    
T  7801251 gaacctgagaccttgaagaggagcacactcccaggtcccaagtcaataccaccaggccaaaccaagtgggtta 7801179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 350
Target Start/End: Complemental strand, 21854614 - 21854550
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtggg 350  Q
    |||||| | ||||||||||| |||||||| |||  ||||||||| ||| || |||||||||||||    
T  21854614 tgagactttgaggaggagcacactcccagatccctagccaataccatcaggccaacccaagtggg 21854550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 29385753 - 29385817
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtggg 350  Q
    |||||||| ||||||||||| ||||| | |||| ||||||| || ||| || |||||||||||||    
T  29385753 tgagaccttgaggaggagcacactccaaagtcccaagccaacaccatccggccaacccaagtggg 29385817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 31835284 - 31835192
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  |||| ||| |||| |||||||| ||||||||||| ||||| ||  || ||||||| || | | || |||||||||||||||    
T  31835284 aaattggcaccagggataatcgaacctgagaccttgaggaggagcacactccaagcacccaagccaacaccaccaggccaacccaagtgggtt 31835192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 311
Target Start/End: Complemental strand, 37473707 - 37473655
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcc 311  Q
    ||||||| || | |||||||| |||| ||||||||| ||||||||||||||||    
T  37473707 taaattgacattagggagaatcgaacctgagacctcaaggaggagcaaactcc 37473655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 15321 - 15399
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| | | |  |||||||||||||||    
T  15321 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 15399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 31623001 - 31623067
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||||||||||| |||||||||||| |||||||||| | |||  |||||||||||||||    
T  31623001 tgagacctcgaggaggagcacactcccaggtcccaagccaataccaccggaccaacccaagtgggtt 31623067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 274 - 352
Target Start/End: Complemental strand, 33549182 - 33549104
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||| |||||||||||||||||||| |||||||||||| |||||||||| | | |  |||||||||||||||    
T  33549182 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggtt 33549104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 12188287 - 12188379
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| | |||||| |||| ||| |||| ||||||||||| |||||||||||| |||||||||| |   || |||||||||||||||    
T  12188287 aaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 12188379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 24334009 - 24334101
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| || ||||||||||| |||||||| ||||||||||| ||| | | |||| ||||||| || ||| || |||||||||||||||    
T  24334009 aaattggcaccggtgagaattgaacctgagaccttgaggaggagcatactgcaatgtcccaagccaacaccatccggccaacccaagtgggtt 24334101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 352
Target Start/End: Complemental strand, 21418561 - 21418470
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| |||||||| |||| |||||| | ||||||||||| ||||||| |||| |||||||||| | | || |||||||| ||||||    
T  21418561 aattggcactagggagaatcgaacttgagacatggaggaggagcacactcccaagtcccaagccaataccaccaggccaacccaactgggtt 21418470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 259 - 352
Target Start/End: Original strand, 12234490 - 12234583
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||| |||||| |||||| |||| ||||||||||||  |||||| |||||||||||| ||| |||||| | | || ||||| |||||||||    
T  12234490 taaattgacactggagagaatcgaacctgagacctcgagagggagcacactcccaggtcccaagtcaataccaccaggccaacctaagtgggtt 12234583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 257 - 353
Target Start/End: Complemental strand, 12633104 - 12633008
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||||| || ||| |||||| |||||||||| ||||| |||||||| |||||||  ||| ||| |||||  | |||| ||||||||||||||||    
T  12633104 cttaaattgacattggagagaatcgaacatgagatctcgaagaggagcacactcccaaatcccaagtcaatatcaccgggacaacccaagtgggtta 12633008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 354
Target Start/End: Complemental strand, 30127493 - 30127398
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    ||||||||||| ||  ||||| |||| ||||||||||| |||||||| ||||||||  || |||||||||| | | |  |||||||||||||||||    
T  30127493 taaattggcaccggaaagaatcgaacctgagacctcgaagaggagcacactcccagaccccaagccaataccaccagaccaacccaagtgggttaa 30127398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 329
Target Start/End: Original strand, 10338165 - 10338227
Alignment:
Q  267 cactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||| |||| |||| |||||||| ||||||||||| ||||| |||||| ||||||||||    
T  10338165 cactggggggaatcgaacctgagaccttgaggaggagcacactcctaggtcccaagccaatac 10338227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 329
Target Start/End: Complemental strand, 346625 - 346554
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||| ||| || |||||| |||||||||||||||||||| |||| ||| |||||||| ||| ||||||    
T  346625 cttaaattgacacgggtgagaatcgaacatgagacctcgaggagaagcacact-ccaggtcccaagtcaatac 346554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 303
Target Start/End: Original strand, 8597731 - 8597774
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggag 303  Q
    ||||||||||||| ||||||||||| |||||||| |||||||||    
T  8597731 aaattggcactggagagaattgaacttgagaccttgaggaggag 8597774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 313
Target Start/End: Original strand, 15951300 - 15951339
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactccca 313  Q
    |||||||||||||||||||| ||||||||||| |||||||    
T  15951300 gagaattgaacatgagaccttgaggaggagcacactccca 15951339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 286 - 352
Target Start/End: Original strand, 3172778 - 3172844
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| |||||||| |||||||||||| ||| |||||  ||||||  ||| ||||||||||    
T  3172778 tgagacctcgatgaggagcatactcccaggtcccaagtcaatatcatcgggctaactcaagtgggtt 3172844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 24641173 - 24641243
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| || ||||||| |||| | | |||||||||||||||| |||||||| ||| ||| ||||||    
T  24641173 taaattggcagtgaggagaatcgaaccttaaacctcgaggaggagcacactcccagatcccaagtcaatac 24641243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 274 - 332
Target Start/End: Original strand, 34786452 - 34786510
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactat 332  Q
    |||||| |||| |||||| ||||| ||||||| |||||||| ||| |||||||||||||    
T  34786452 gagaatcgaacttgagacttcgagaaggagcacactcccagatcccaagccaatactat 34786510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 286 - 351
Target Start/End: Original strand, 6758432 - 6758497
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggt 351  Q
    ||||||||||||| |||||| |||||||  |||||||||||||| | | || |||| |||||||||    
T  6758432 tgagacctcgaggtggagcacactcccaaatcctaagccaataccaccaggccaacacaagtgggt 6758497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 311
Target Start/End: Complemental strand, 9626110 - 9626073
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcc 311  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  9626110 gagaatcgaacatgagacctcgaggaggagcatactcc 9626073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 328
Target Start/End: Complemental strand, 16405178 - 16405109
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    ||||||| ||| || |||||| |||  ||||||||||||||| |||| |||||||||||| || ||||||    
T  16405178 taaattgacacaggtgagaatcgaaactgagacctcgaggagaagcacactcccaggtcccaaaccaata 16405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Complemental strand, 13441152 - 13441104
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagca 305  Q
    ||||||||||||||| | ||||| |||| |||||||||| |||||||||    
T  13441152 cttaaattggcactgagaagaatcgaacttgagacctcgtggaggagca 13441104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 352
Target Start/End: Complemental strand, 14558042 - 14557962
Alignment:
Q  272 gggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||| |||| |||||||  ||||||||||| ||| |||||||| ||||||| || | | |  |||||||||||||||    
T  14558042 gggagaatcgaacctgagacccggaggaggagcacacttccaggtcccaagccaacaccaccagaccaacccaagtgggtt 14557962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 326
Target Start/End: Original strand, 24507534 - 24507586
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||||||||   |||||| ||||||||||||||||| |||||| |||||||    
T  24507534 gagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaa 24507586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 32613122 - 32613214
Alignment:
Q  258 ttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtggg 350  Q
    |||||||| |||||  |||||| |||||||||| || ||| ||||||| ||||||||  || ||| |||||| | | || |||||||||||||    
T  32613122 ttaaattgacactgaagagaatcgaacatgagatcttgagaaggagcacactcccagaccccaagtcaataccaccaggccaacccaagtggg 32613214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 8051307 - 8051214
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| || | |||| |||| ||||||||||||||| |||| ||| |||||||| |||||||||| | | || |||||||||||||||    
T  8051307 taaattggcaccggagggaatcgaacttgagacctcgaggagaagcatactgccaggtcccaagccaataccaccaggccaacccaagtgggtt 8051214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 260 - 354
Target Start/End: Complemental strand, 40063711 - 40063617
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    ||||||||||||| |||||| |||| ||||||||  |||||||||| |||| ||| ||| ||||||||||||    | |||||||||||||||||    
T  40063711 aaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatcccaagccaatactactaagtcaacccaagtgggttaa 40063617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 47454600 - 47454670
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| |||||||||| |||| |||||||||||||||||||| ||||| || ||  ||||||||||    
T  47454600 taaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaagccaatac 47454670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 274 - 327
Target Start/End: Original strand, 10445137 - 10445190
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaat 327  Q
    |||||| |||| |||||||||||||||||||| |||||||||||| ||||||||    
T  10445137 gagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaat 10445190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 325
Target Start/End: Original strand, 44743839 - 44743904
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagcca 325  Q
    ||||||||||||| || ||| |||| |||||||||||||||||||| |||||||| ||| ||||||    
T  44743839 aaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatcccaagcca 44743904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 47236955 - 47237024
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| ||||||||| ||||||||||||| || |||||||| |||||| ||||| || |||||||    
T  47236955 aaattggcaccggggagaatcgaacatgagaccttgaagaggagcacactcccgggtcccaaaccaatac 47237024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 260 - 353
Target Start/End: Original strand, 51903862 - 51903955
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    |||||| ||| || |||||| |||| ||||||| |||||||||||| |||||||| ||| |||||||||| | | || ||||||| ||||||||    
T  51903862 aaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatcccaagccaataccaacaggtcaacccaggtgggtta 51903955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 31520589 - 31520681
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||||| ||||||  ||| | |||||||||||||||||| |||||||| ||| |||||||| | | | || |||||||||||||||    
T  31520589 aaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaacccaagtgggtt 31520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 37788449 - 37788541
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| | |||||| |||| |||||||| ||||||||||| ||||| |||| | ||| |||||| |  ||| |||||||||||||||    
T  37788449 aaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 274 - 352
Target Start/End: Original strand, 10499107 - 10499185
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||| ||||||||| |||| ||||| |||||||| ||| |||||||||| | | || |||||||||||||||    
T  10499107 gagaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggtt 10499185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 286 - 352
Target Start/End: Complemental strand, 21960617 - 21960551
Alignment:
Q  286 tgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||||||||||| |||| ||||||| |||||||||| | | | ||||||||| ||||||    
T  21960617 tgagacctcgaggaggagcacactctcaggtcccaagccaataccaccagcgcaacccaattgggtt 21960551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 4844495 - 4844564
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| || |||||| || | |||||||||||||||||||| |||||||| ||| ||| ||||||    
T  4844495 aaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatac 4844564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 4870191 - 4870260
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||||||| || |||||| || | |||||||||||||||||||| |||||||| ||| ||| ||||||    
T  4870191 aaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatcccaagtcaatac 4870260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 354
Target Start/End: Complemental strand, 14339701 - 14339608
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    |||||||||| |||||||| |||| |||||| | ||||||||||| |||||||  ||| |||||||||| | | || ||| |||| ||||||||    
T  14339701 aattggcactagggagaatcgaacctgagacattgaggaggagcacactcccaaatcccaagccaataccaccaggccaatccaactgggttaa 14339608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 36720474 - 36720381
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||| |||| | |||||| |||| ||| |||||||||||||||| |||||||  ||| |||||||||| | | |  |||||||||||||||    
T  36720474 taaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactcccatatcccaagccaataccaccagaccaacccaagtgggtt 36720381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 260 - 329
Target Start/End: Complemental strand, 53413037 - 53412968
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||  | ||||||||||| |||||||| ||||||||||| ||||||||||   ||||||||||    
T  53413037 aaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccaggttacaagccaatac 53412968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 257 - 349
Target Start/End: Original strand, 30510180 - 30510272
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgg 349  Q
    |||| |||| |||| | |||||| |||| |||||||||||| ||||||| ||||| |||||| |||||| ||| | | || ||||||||||||    
T  30510180 cttagattgacactagagagaatcgaacctgagacctcgagaaggagcatactcctaggtcccaagccagtaccaccaggacaacccaagtgg 30510272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 276 - 352
Target Start/End: Complemental strand, 53956460 - 53956384
Alignment:
Q  276 gaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||| |||||||||||||| || ||| ||| |||||| ||||| |||||||| | ||| || |||||||||||||||    
T  53956460 gaatcgaacatgagacctcaagaaggggcacactcccgggtcccaagccaatgccatcaggacaacccaagtgggtt 53956384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 352
Target Start/End: Complemental strand, 9557391 - 9557320
Alignment:
Q  281 gaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||| ||||| |||||||||||||| |||| ||| ||| |||||||||||||| || || | ||||||||||    
T  9557391 gaacctgagatctcgaggaggagcacactctcagatcccaagccaatactatcaggccagctcaagtgggtt 9557320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 326
Target Start/End: Original strand, 16900676 - 16900731
Alignment:
Q  271 ggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    ||||||||| ||||||||||||| || |||||||| ||||| |||||| |||||||    
T  16900676 ggggagaatcgaacatgagaccttgacgaggagcacactccaaggtcccaagccaa 16900731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 28531056 - 28531111
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||| | | |||||||||||||||||| |||||||| ||| ||||||||||    
T  28531056 gagaattgagcctaagacctcgaggaggagcatactcccagatcccaagccaatac 28531111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 313
Target Start/End: Original strand, 33861728 - 33861771
Alignment:
Q  270 tggggagaattgaacatgagacctcgaggaggagcaaactccca 313  Q
    |||||||||| |||||| |||||||||||||||||| |||||||    
T  33861728 tggggagaatcgaacattagacctcgaggaggagcacactccca 33861771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Complemental strand, 35111266 - 35111215
Alignment:
Q  266 gcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtc 317  Q
    ||||| |||| ||| ||||||||||||||||||| ||||| |||||||||||    
T  35111266 gcactagggaaaatcgaacatgagacctcgaggatgagcacactcccaggtc 35111215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 2667955 - 2667885
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||| |||| | || ||| |||| |||||||||||||| ||||| |||||||| ||| ||||||||||    
T  2667955 taaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatcccaagccaatac 2667885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 12761605 - 12761535
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||| ||||| ||| |||| ||||| ||| ||||||| || |||||||||||| ||| ||||||    
T  12761605 taaattggcaccggggaaaatcgaacctgagagctcaaggaggaacacactcccaggtcccaagtcaatac 12761535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 353
Target Start/End: Complemental strand, 14186740 - 14186647
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||||| ||| || |||||| |||| |||||||| ||||||||||| ||| |||||||| ||| |||||| |   || ||||||||||||||||    
T  14186740 taaattgacaccggagagaatcgaacctgagaccttgaggaggagcacact-ccaggtcccaagacaataccactaggccaacccaagtgggtta 14186647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 20501788 - 20501730
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcc 318  Q
    ||||||||||||| |||||| |||| ||||||||  |||||||||| |||| |||||||    
T  20501788 aaattggcactggagagaatcgaacctgagaccttaaggaggagcacactctcaggtcc 20501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 290 - 328
Target Start/End: Complemental strand, 27259223 - 27259185
Alignment:
Q  290 acctcgaggaggagcaaactcccaggtcctaagccaata 328  Q
    |||||||||||||||| |||||||||||| |||||||||    
T  27259223 acctcgaggaggagcacactcccaggtcccaagccaata 27259185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Original strand, 32651421 - 32651491
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||| |||| | |||||| |||  ||||| || ||||||||||| |||||||||||| ||||||||||    
T  32651421 taaattgacactagagagaatcgaatctgagatcttgaggaggagcacactcccaggtcccaagccaatac 32651491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 329
Target Start/End: Original strand, 8853783 - 8853852
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||   |||| || |||||||||||||| |||||||||| ||||||| |||| |||| |||||    
T  8853783 aaattggcaccaaggaggatcgaacatgagacctcaaggaggagcatactcccatgtcccaagctaatac 8853852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 352
Target Start/End: Complemental strand, 9832542 - 9832497
Alignment:
Q  307 actcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||| |||||||||| | |||| |||||||||||||||    
T  9832542 actcccaggtcccaagccaataccaccgggccaacccaagtgggtt 9832497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 5499391 - 5499483
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| ||||||||| |||| | ||||||  |||||||||| |||| ||| ||  ||| |||||| | | || |||||||||||||||    
T  5499391 aaattggcaccggggagaatagaaccttagaccttaaggaggagcacactctcagatctcaagtcaataccaccaggccaacccaagtgggtt 5499483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 352
Target Start/End: Original strand, 16354872 - 16354968
Alignment:
Q  256 ccttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||| |||||||  | |||||| |||| |||||||  ||||||||||| |||| ||||| | |||||||||| |   || |||||||||||||||    
T  16354872 ccttaatttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactaggccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 26871488 - 26871580
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||| |||| |||||  ||| | |||| | ||||||||| ||||||| |||||| ||||||| || | | || |||||||||||||||    
T  26871488 aaattggcattgggtagaatcaaacctcagactttgaggaggagaaaactccaaggtcccaagccaacaccaccaggccaacccaagtgggtt 26871580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Original strand, 27093345 - 27093437
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||  | ||||||  ||| |||||||| ||||||||||| ||||||| || | |||||||||| |   || |||||||||||||||    
T  27093345 aaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactaggccaacccaagtgggtt 27093437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 260 - 352
Target Start/End: Complemental strand, 30232422 - 30232330
Alignment:
Q  260 aaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||| || |||||| |||| |||||||  ||||||||||| | | |||| ||  || ||||||| | | ||||||||||||||||||    
T  30232422 aaattggcaccggagagaatggaacctgagaccatgaggaggagcacagttccagatcgcaaaccaataccaccagggcaacccaagtgggtt 30232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 47279389 - 47279457
Alignment:
Q  261 aattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||| ||| |||||| ||| |||||||||||||  |||||||||| |||||||| ||| |||| |||||    
T  47279389 aattagcattggggaaaatcgaacatgagaccttaaggaggagcacactcccagatcccaagcaaatac 47279457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 256 - 329
Target Start/End: Original strand, 94951 - 95024
Alignment:
Q  256 ccttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||||||||  | || |||||||| |||||||| ||||||||||| |||||||||| | ||||||||||    
T  94951 ccttaaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccaggttccaagccaatac 95024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 268 - 352
Target Start/End: Original strand, 2462 - 2546
Alignment:
Q  268 actggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    |||||||||||| |||| |||||||| ||||||||||| |||||||| ||| || ||||||| | |||  |||||||| ||||||    
T  2462 actggggagaatcgaacctgagaccttgaggaggagcacactcccagatccaaaaccaataccaccggaccaacccaaatgggtt 2546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 274 - 354
Target Start/End: Original strand, 41631 - 41711
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggttaa 354  Q
    ||||||||||| |||||||||||||||||||| |||| ||| ||  |||||||||| |   || |||||||||||||||||    
T  41631 gagaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggttaa 41711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 274 - 329
Target Start/End: Complemental strand, 11606 - 11551
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||||||||||||||| |||||||| ||| ||||||||||    
T  11606 gagaatcgaacctgagacctcgaggaggagcacactcccagatcccaagccaatac 11551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 274 - 329
Target Start/End: Original strand, 19960 - 20015
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    |||||| |||| |||||||| ||||||||||| |||||||||| | ||||||||||    
T  19960 gagaatcgaacctgagaccttgaggaggagcatactcccaggttccaagccaatac 20015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 353
Target Start/End: Original strand, 19846 - 19924
Alignment:
Q  275 agaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtta 353  Q
    ||||| |||| ||||||||| |||||||||| |||||||| ||| |||||||||| |||  | |||  |||||||||||    
T  19846 agaatcgaacttgagacctcaaggaggagcagactcccagatcccaagccaataccatcatgccaattcaagtgggtta 19924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 274 - 331
Target Start/End: Original strand, 45757 - 45814
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatacta 331  Q
    |||||| |||||||||||||| ||||||| || ||||| |||||| ||| ||||||||    
T  45757 gagaatcgaacatgagacctcaaggaggaacacactcctaggtcccaaggcaatacta 45814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 112375 - 112282
Alignment:
Q  259 taaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatactatcggggcaacccaagtgggtt 352  Q
    ||||||||||| || |||||| |||| | ||||||| | ||||| || |||||||| | | |||||||||| | | || |||||||||||||||    
T  112375 taaattggcaccggagagaatcgaacctcagacctcaaagaggaccacactcccagattccaagccaatacaaccaggccaacccaagtgggtt 112282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0368 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 329
Target Start/End: Original strand, 14946 - 15017
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaatac 329  Q
    ||||||||| ||| || ||||||  || ||||||||||||||||||||| ||||| ||||  |||||||||||    
T  14946 cttaaattgtcaccggagagaatcaaatatgagacctcgaggaggagcacactcctaggt-ttaagccaatac 15017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 1831 - 1779
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    |||||||||||   |||||| ||||||||||||||||| |||||| |||||||    
T  1831 gagaattgaaccctagaccttgaggaggagcaaactccaaggtcccaagccaa 1779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 274 - 326
Target Start/End: Complemental strand, 12267 - 12215
Alignment:
Q  274 gagaattgaacatgagacctcgaggaggagcaaactcccaggtcctaagccaa 326  Q
    ||||||| ||| | |||||| ||||||||||||||||| |||||| |||||||    
T  12267 gagaatttaactttagaccttgaggaggagcaaactccaaggtcccaagccaa 12215  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 257 - 305
Target Start/End: Original strand, 92263 - 92311
Alignment:
Q  257 cttaaattggcactggggagaattgaacatgagacctcgaggaggagca 305  Q
    |||||||||| ||| || | |||||||||||||| ||||||||||||||    
T  92263 cttaaattggaacttggaaaaattgaacatgagatctcgaggaggagca 92311  T

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