View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13375_high_17 (Length: 355)
Name: NF13375_high_17
Description: NF13375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13375_high_17 |
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Alignment Details
Target: chr7 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 10 - 336
Target Start/End: Original strand, 35485066 - 35485393
Alignment:
| Q |
10 |
aagaatatttcaaaaatcaaactgaacaatttttctctgttcaattgattctctgaggaagataaatataaatagagctgcttgagctataaggttttca |
109 |
Q |
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| T |
35485066 |
aagaatatttcaaaaatcaaactgaacaatttttctctgttcaattgattctctgaggaagataaatataaatagagctgcttgagctataaggttttca |
35485165 |
T |
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| Q |
110 |
ctaccttgcatagaaacaccactaactaaccctaaacttatctcaaaaagaattattgagcttgttagaacaataagtgaatagttgatatttttagggg |
209 |
Q |
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| T |
35485166 |
ctaccttgcatagaaacaccactaactaaccctaaacttatctcaaaaagaattattgagcttgttagaacaataagtgaatagttgatatttttagggg |
35485265 |
T |
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| Q |
210 |
aataaacagttgaattgtt-agtgtgaaccacaatcatctgttatttgattatttatttaggttaatcacaacnnnnnnnnnnnnnnaagcgaaatagta |
308 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
35485266 |
aataaacagttgaattgttaagtgtgaaccacaatcatctgttatttgattatttatttaggttaatcacaactttttaatttttttaagcgaaatagta |
35485365 |
T |
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| Q |
309 |
ataaaattaaaataaaaagggaacaaag |
336 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
35485366 |
ataaaattaaaataaaaagggaacaaag |
35485393 |
T |
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