View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13375_low_4 (Length: 681)
Name: NF13375_low_4
Description: NF13375
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13375_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 430 - 673
Target Start/End: Original strand, 47851806 - 47852049
Alignment:
| Q |
430 |
ctaaaattgaaagataaacaatctctcatacaataagaaatatagcgcagaagatgaaaatgatgtatgatacgactttaatttttctgaaaacttcaac |
529 |
Q |
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| T |
47851806 |
ctaaaattgaaagataaacaatctctcatacaataagaaatatagcgcagaagatgaaaatgatgtatgatacgactttaatttttctgaaaacttcaac |
47851905 |
T |
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| Q |
530 |
attaaaaattctttcggtnnnnnnnnntcaactaacaataacttaatgaaagactattcatatttattatgtatatatcagaaagattggtcgtaattca |
629 |
Q |
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| T |
47851906 |
attaaaaattctttcggtaaaaaaaaatcaactaacaataacttaatgaaagactattcatatttattatgtatatatcagaaagattggtcgtaattca |
47852005 |
T |
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| Q |
630 |
gatagaaaccagaaagcaacaaaatgcagaatgttgatgatgtc |
673 |
Q |
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| T |
47852006 |
gatagaaaccagaaagcaacaaaatgcagaatgtttatgatgtc |
47852049 |
T |
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