View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13379_low_3 (Length: 217)

Name: NF13379_low_3
Description: NF13379
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13379_low_3
NF13379_low_3
[»] chr6 (13 HSPs)
chr6 (19-200)||(16838335-16838516)
chr6 (19-200)||(17070160-17070341)
chr6 (19-200)||(16797823-16798004)
chr6 (19-169)||(16867362-16867512)
chr6 (19-200)||(16658663-16658844)
chr6 (19-200)||(16781756-16781937)
chr6 (19-200)||(16988111-16988283)
chr6 (19-192)||(18872518-18872691)
chr6 (19-200)||(18793947-18794128)
chr6 (19-200)||(18587028-18587209)
chr6 (19-152)||(16788619-16788752)
chr6 (19-200)||(18870033-18870214)
chr6 (19-127)||(18805589-18805697)
[»] chr3 (2 HSPs)
chr3 (19-200)||(38938682-38938863)
chr3 (19-201)||(7052585-7052767)
[»] scaffold0256 (1 HSPs)
scaffold0256 (19-200)||(9801-9982)
[»] scaffold0133 (2 HSPs)
scaffold0133 (19-200)||(9158-9339)
scaffold0133 (19-200)||(13506-13687)
[»] scaffold0144 (1 HSPs)
scaffold0144 (19-199)||(38141-38321)
[»] scaffold0511 (1 HSPs)
scaffold0511 (19-200)||(10013-10194)
[»] scaffold0230 (1 HSPs)
scaffold0230 (19-200)||(5333-5514)
[»] chr8 (1 HSPs)
chr8 (19-136)||(13378748-13378868)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 9e-94; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 16838335 - 16838516
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16838335 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttgccttcatgtgcttttgaagttattgaacattc 16838434  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  16838435 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacattgcttgttatctgcttc 16838516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 17070160 - 17070341
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17070160 tcatcctctttccaatgttgcgatgagccaaaatcttcattggatggaaacgggtgatgcacttgttgccttcatgtgcttttgaagttattgaacattc 17070259  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17070260 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 17070341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 16797823 - 16798004
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  16797823 tcatcctctttccaatgttgcgacgagccaaaattttcattggatgaaaacgggtgatgcacttgttgccttcatgtgcttttgaagttattgaacattc 16797922  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  16797923 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccatttttgcacaacatcgcttgttatctgcttc 16798004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 19 - 169
Target Start/End: Complemental strand, 16867512 - 16867362
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||| || |||| |||||||||||||||||||||||    
T  16867512 tcatcctctttccaatgttgcgacgagccaaaatcttcataggatggaaactagtgatgcacttgttgcctccatgcgcttttgaagttattgaacattc 16867413  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagcca 169  Q
    |||||||||||||||||||||||||||||| ||||||| ||| ||||||||    
T  16867412 atccaatatatcatcaagtacataagcagcgtcacccagtttttgcagcca 16867362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 16658663 - 16658844
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||| ||||  ||||||||||||||| || ||||||||||||||||||||||||||||    
T  16658663 tcatcctctttccaatgttacgacgagccaaaatcttcataggatgaaaactagtgatgcacttgttgcctccatgtgcttttgaagttattgaacattc 16658762  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||| |   |||||| |||| ||||||| ||||||    
T  16658763 atccaatatatcatcaagtacataagcagcgtcacccagtttttgcagccagttcctcacaagatcgtttgttatttgcttc 16658844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 16781756 - 16781937
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||| |  ||||||||||| | ||||||||||||||    
T  16781756 tcatcctctttccaatgttgcgacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgcttttaaggttattgaacattc 16781855  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
     ||||||||||||||||| |||||||||||||||| || || ||| | ||| | ||||||| ||||  ||||||| ||||||    
T  16781856 gtccaatatatcatcaagcacataagcagcatcacgcagttgctgtaaccactctttcacagcatcatttgttatttgcttc 16781937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 16988111 - 16988283
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||||||||  |||         ||| || ||||||||||||| |||||||| |||||    
T  16988111 tcatcctcttcccaatgttgcgatgagccaaaatcttcataggatggaaactagtg---------ttgtctccatgtgcttttgaggttattgagcattc 16988201  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    ||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||| ||||||||| ||||||    
T  16988202 atccaatatatcatcaagtacataagcagcatcagacagtttctgcagccattgtttcacaacattgcttgttatttgcttc 16988283  T

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Target: chr6; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 19 - 192
Target Start/End: Complemental strand, 18872691 - 18872518
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| |  |||||||||||||||||| | ||||||||||||||||| ||||||||| || ||||||||||||| ||||||| ||| ||    
T  18872691 tcatcctctttccaatatcccgacgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatc 18872592  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgtta 192  Q
    |||||||||||||||||| ||||| ||| |||||  ||  ||||||||||| | ||||||||||  ||||||||    
T  18872591 atccaatatatcatcaagaacataggcaacatcagtcagcttctgcagccaatctttcacaacacggcttgtta 18872518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 18794128 - 18793947
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| || | |||||||||||||||| | ||||| ||||||||||| ||||||||| || ||||||||||||| ||||||| ||| ||    
T  18794128 tcatcctctttccaatattcctacgagccaaaatcttcttaggatgtaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatc 18794029  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||| ||||| ||| |||||   |  ||||||||||| | ||||||||||  ||||||||| ||||||    
T  18794028 atccaatatatcatcaagaacataggcaacatcagttagcttctgcagccaatctttcacaacacggcttgttatttgcttc 18793947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 18587209 - 18587028
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| |  | ||||||||||||| || | ||||||||||||||||| ||||||||| || |||||||||||||  |||||| ||| ||    
T  18587209 tcatcctctttccaatatccctacgagccaaaatcatcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgattttattgtacaatc 18587110  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||| ||||| ||||||||| |||||  ||  ||||||||||| | ||||||||||  ||||||||| ||||||    
T  18587109 atccaatatatcgtcaagaacataagcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttatttgcttc 18587028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 16788619 - 16788752
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    ||||||||||||||| ||  ||  |||||||||||||| | ||| ||||||||||||||||||||||| || ||||||||||||| ||||||||||||||    
T  16788619 tcatcctctttccaacgtcacgctgagccaaaatcttcttaggaaggaaacgggtgatgcacttgttgtctccatgtgcttttgatgttattgaacattc 16788718  T
Q  119 atccaatatatcatcaagtacataagcagcatca 152  Q
     ||||||| ||||||||| |||| ||||||||||    
T  16788719 gtccaataaatcatcaagaacatgagcagcatca 16788752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 18870214 - 18870033
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| |  | ||||||||||||| || | |||||||||| |||||| ||||||||| || |||||||||||||  |||||| ||| ||    
T  18870214 tcatcctctttccaatatccctacgagccaaaatcatcttaggatggaaactggtgatccacttgttgtctccatgtgcttttgattttattgtacaatc 18870115  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||| ||||||||| |||||  ||  ||||||||||| | ||||||||||  ||| ||||| ||||||    
T  18870114 atccaatatatcatcaagaacataagcaacatcagtcagcttctgcagccaatctttcacaacacggctcgttatttgcttc 18870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 19 - 127
Target Start/End: Complemental strand, 18805697 - 18805589
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| |  |||||||||||||||||| | ||||||||||||||||| ||||||||| || ||||||||||||| ||||||| ||| ||    
T  18805697 tcatcctctttccaatatcccgacgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatc 18805598  T
Q  119 atccaatat 127  Q
    |||||||||    
T  18805597 atccaatat 18805589  T

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Target: chr3 (Bit Score: 118; Significance: 2e-60; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 19 - 200
Target Start/End: Complemental strand, 38938863 - 38938682
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||| ||||||||| |  ||||||||||| | ||||||||||||||    
T  38938863 tcatcctctttccaatgttgcgacgagccaaaatcttcagaggatggaaacgagtgatccacttgttgtcgccatgtgcttttaaggttattgaacattc 38938764  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||| | ||||||||||| |||||| || ||||||    
T  38938763 atccaatatatcatcaagtacataagcaacatcacgcaatttctgcagccagtctttcacaacatggcttgtaatttgcttc 38938682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 19 - 201
Target Start/End: Complemental strand, 7052767 - 7052585
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    ||||||||||||||||||  || ||||||||||||||| | ||||||||||||||||| ||||||||| || ||   | |||||| ||||||||||||||    
T  7052767 tcatcctctttccaatgtcacgccgagccaaaatcttcttaggatggaaacgggtgatccacttgttgtctccacagggttttgatgttattgaacattc 7052668  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttca 201  Q
     ||||||||||||||||| |||| |||||||||| |||  ||||||||||| | ||| ||| ||| |||||| || |||||||    
T  7052667 gtccaatatatcatcaagaacatgagcagcatcagccagcttctgcagccaatcttttacagcatggcttgtaatttgcttca 7052585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 9801 - 9982
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||| |  ||||||||||| | ||||||||||||||    
T  9801 tcatcctctttccaatgttgcgacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgcttttaaggttattgaacattc 9900  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||| |||||||||||||||| || || ||| ||||| | ||| ||| ||||| ||||||| ||||||    
T  9901 atccaatatatcatcaagcacataagcagcatcacgcagttgctgtagccactctttgacagcatcgtttgttatttgcttc 9982  T

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Target: scaffold0133 (Bit Score: 94; Significance: 5e-46; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 9158 - 9339
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||| | |||||||    ||||||||||| | ||||||||||||||    
T  9158 tcatcctctttccaatgttgcgacgaaccaaaatcttcataggatggaaacgagtgatccgcttgttgttaccatgtgcttttaaggttattgaacattc 9257  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||| |||||||||||||||| || || ||| ||||| | ||| ||| ||||| ||||||| ||||||    
T  9258 atccaatatatcatcaagcacataagcagcatcacgcagttgctgtagccactctttgacagcatcgtttgttatttgcttc 9339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 13506 - 13687
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||| |  |||||||| || | ||||||||||||||    
T  13506 tcatcctctttccaatgttgcgacgagccaaaatcttcataggatggaaacgagtgatccgcttgttgtcgccatgtgctcttaaggttattgaacattc 13605  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||  |||||||||||||||  || || ||| ||||| | ||| ||| ||||| ||||||| ||||||    
T  13606 atccaatatatcatcaatcacataagcagcatcaatcagttgctgtagccactctttgacagcatcgtttgttatttgcttc 13687  T

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Target: scaffold0144 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 19 - 199
Target Start/End: Original strand, 38141 - 38321
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||||||||||| ||||||||||||||  ||||||||||  ||||||||||||| | || | |||| |||| | ||||||||||||||    
T  38141 tcatcctctttccaatgttgcgacaagccaaaatcttcacaggatggaaactagtgatgcacttgtcgtctccgtgtggttttaaggttattgaacattc 38240  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgctt 199  Q
    ||||||||||||||||||||||||||||| |||||| | || ||| ||||| | ||||||  ||||| ||||||| |||||    
T  38241 atccaatatatcatcaagtacataagcagaatcaccgagttgctgtagccactctttcacggcatcgtttgttatttgctt 38321  T

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Target: scaffold0511 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0511
Description:

Target: scaffold0511; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 10013 - 10194
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| |  | |||||||||||||||| | ||||| ||||||||||| ||||||||| || ||||||||||||| ||||||| ||| ||    
T  10013 tcatcctctttccaatatgccaacgagccaaaatcttcttaggatgaaaacgggtgatccacttgttgtctccatgtgcttttgatgttattgtacaatc 10112  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||||||||| ||||| ||| |||||   |  ||||||||||| | ||||||||||  ||||||||| ||||||    
T  10113 atccaatatatcatcaagaacataggcaacatcagttagcttctgcagccaatctttcacaacacggcttgttatttgcttc 10194  T

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Target: scaffold0230 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 200
Target Start/End: Original strand, 5333 - 5514
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttcatgtgcttttgaagttattgaacattc 118  Q
    |||||||||||||||| |  | ||||||||||||| || | ||||||||||||||||| ||||||||| || |||||||||||||  |||||| ||| ||    
T  5333 tcatcctctttccaatatccctacgagccaaaatcatcttaggatggaaacgggtgatccacttgttgtctccatgtgcttttgattttattgtacaatc 5432  T
Q  119 atccaatatatcatcaagtacataagcagcatcacccaatttctgcagccattgtttcacaacatcgcttgttatctgcttc 200  Q
    |||||||||||| ||||| ||||||||| |||||  ||  ||||||||||| | ||||||||||  ||||||||| ||||||    
T  5433 atccaatatatcgtcaagaacataagcaacatcagtcagcttctgcagccaatctttcacaacacggcttgttatttgcttc 5514  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 136
Target Start/End: Original strand, 13378748 - 13378868
Alignment:
Q  19 tcatcctctttccaatgttgcgacgagccaaaatcttcattggatggaaacgggtgatgcacttgttggcttc---atgtgcttttgaagttattgaaca 115  Q
    ||||||||||||||||    || ||||||||||||||| | ||||||||||| ||||| ||||||| | | ||   ||||||||| ||  |||| ||| |    
T  13378748 tcatcctctttccaatacctcggcgagccaaaatcttcttaggatggaaacgagtgatccacttgtcgtcgtctccatgtgctttggatcttatcgaata 13378847  T
Q  116 ttcatccaatatatcatcaag 136  Q
    ||| || ||||||||||||||    
T  13378848 ttcgtctaatatatcatcaag 13378868  T

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