View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13380_low_15 (Length: 293)
Name: NF13380_low_15
Description: NF13380
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13380_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 283
Target Start/End: Original strand, 40076876 - 40077143
Alignment:
| Q |
16 |
caccatggacaaaccagtgaaaaattgggacgagaagcgtaaagaatggctacttcaccatccttcattcgtggtcggagcaagcgaaaagatacttgtt |
115 |
Q |
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| T |
40076876 |
caccatggacaaaccagtgaaaaattgggacgagaagcgtaaagaatggctacttcaccatccttcattcgtggtcggagcaagcgaaaagatacttgtt |
40076975 |
T |
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| Q |
116 |
ataaccggttcacaacctacaaagtgtgacaacccgattggcgaccaccttttactgcggttctttaaaaacaaggttgattattgtcgtatacacaacc |
215 |
Q |
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| T |
40076976 |
ataacgggttcacaacctacaaagtgtgacaacccgattggcgaccaccttttactgcggttctttaaaaacaaggttgattattgtcgtatacacaacc |
40077075 |
T |
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| Q |
216 |
acgacataatctacaacaatgcattgttgcacccaaaaatggacacttattgggccaagtatcctatg |
283 |
Q |
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||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |
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| T |
40077076 |
acgacataatctacaacaatgcattgttggacccgaaaatggacacttattgggccaagtatcctatg |
40077143 |
T |
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