View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13381_high_27 (Length: 203)

Name: NF13381_high_27
Description: NF13381
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13381_high_27
NF13381_high_27
[»] chr1 (86 HSPs)
chr1 (13-185)||(30780248-30780420)
chr1 (35-121)||(39711158-39711244)
chr1 (126-185)||(31490227-31490286)
chr1 (35-121)||(17606394-17606480)
chr1 (126-184)||(25248459-25248517)
chr1 (16-121)||(34749292-34749397)
chr1 (45-121)||(16294163-16294239)
chr1 (126-185)||(23816205-23816264)
chr1 (126-185)||(50078696-50078755)
chr1 (126-184)||(25251182-25251240)
chr1 (126-184)||(31424923-31424981)
chr1 (126-185)||(14097875-14097935)
chr1 (128-184)||(47451948-47452004)
chr1 (126-185)||(2949139-2949198)
chr1 (126-185)||(4131282-4131341)
chr1 (43-122)||(8292889-8292968)
chr1 (126-185)||(9240994-9241053)
chr1 (126-185)||(17324389-17324448)
chr1 (126-184)||(13215399-13215457)
chr1 (126-180)||(18307424-18307478)
chr1 (64-121)||(4907048-4907105)
chr1 (64-121)||(20995903-20995960)
chr1 (126-179)||(25860315-25860368)
chr1 (64-121)||(39826136-39826193)
chr1 (126-182)||(50076583-50076639)
chr1 (126-185)||(3579490-3579549)
chr1 (126-185)||(47906586-47906645)
chr1 (126-185)||(50248477-50248536)
chr1 (43-121)||(4907176-4907254)
chr1 (126-184)||(6995601-6995659)
chr1 (35-121)||(24467714-24467800)
chr1 (43-121)||(33628904-33628982)
chr1 (126-179)||(41647235-41647289)
chr1 (64-121)||(8293042-8293099)
chr1 (126-178)||(12302418-12302471)
chr1 (64-121)||(13229966-13230023)
chr1 (64-121)||(34749223-34749280)
chr1 (64-121)||(39711307-39711364)
chr1 (64-121)||(39970732-39970789)
chr1 (126-185)||(27336844-27336904)
chr1 (126-185)||(27339035-27339095)
chr1 (126-185)||(28206972-28207032)
chr1 (65-121)||(29696794-29696850)
chr1 (45-121)||(43539433-43539509)
chr1 (126-185)||(50307449-50307509)
chr1 (126-185)||(11457382-11457441)
chr1 (43-121)||(13229818-13229896)
chr1 (127-185)||(15916706-15916762)
chr1 (127-185)||(17319203-17319261)
chr1 (35-121)||(18462371-18462457)
chr1 (43-121)||(20995755-20995833)
chr1 (43-121)||(48072047-48072125)
chr1 (64-121)||(7473878-7473935)
chr1 (64-121)||(24467862-24467919)
chr1 (64-121)||(42510100-42510157)
chr1 (64-121)||(48072196-48072253)
chr1 (64-121)||(52058097-52058154)
chr1 (126-185)||(9459336-9459393)
chr1 (126-185)||(9463163-9463220)
chr1 (126-185)||(13447175-13447232)
chr1 (126-185)||(13762158-13762215)
chr1 (126-185)||(15294736-15294793)
chr1 (126-185)||(15823864-15823924)
chr1 (126-185)||(28841001-28841058)
chr1 (126-185)||(28842816-28842873)
chr1 (126-170)||(28998172-28998216)
chr1 (126-170)||(29003888-29003932)
chr1 (89-121)||(39826206-39826238)
chr1 (126-185)||(51750361-51750418)
chr1 (126-157)||(6756841-6756872)
chr1 (126-185)||(18800482-18800539)
chr1 (126-173)||(18839903-18839950)
chr1 (58-121)||(42510243-42510306)
chr1 (59-121)||(7474018-7474080)
chr1 (71-121)||(18342261-18342311)
chr1 (43-121)||(30299317-30299395)
chr1 (126-185)||(38925388-38925449)
chr1 (127-185)||(39932398-39932454)
chr1 (64-121)||(17606543-17606600)
chr1 (64-121)||(18462519-18462576)
chr1 (64-113)||(30299466-30299515)
chr1 (64-121)||(43539582-43539639)
chr1 (152-185)||(51752715-51752748)
chr1 (126-185)||(2510244-2510301)
chr1 (126-170)||(39462836-39462880)
chr1 (126-185)||(46431607-46431664)
[»] scaffold0005 (2 HSPs)
scaffold0005 (126-185)||(50338-50397)
scaffold0005 (126-185)||(52337-52396)
[»] chr8 (59 HSPs)
chr8 (126-185)||(14808132-14808191)
chr8 (43-121)||(10108456-10108534)
chr8 (126-179)||(181848-181901)
chr8 (64-121)||(7689758-7689815)
chr8 (126-178)||(14419102-14419154)
chr8 (45-121)||(21144721-21144797)
chr8 (126-185)||(30480408-30480467)
chr8 (126-185)||(36865910-36865969)
chr8 (43-121)||(14820380-14820458)
chr8 (126-184)||(15068353-15068411)
chr8 (126-184)||(15073083-15073141)
chr8 (43-121)||(42605839-42605917)
chr8 (64-121)||(10108605-10108662)
chr8 (64-121)||(14820529-14820586)
chr8 (64-121)||(26532869-26532926)
chr8 (126-183)||(37214171-37214228)
chr8 (64-121)||(43851750-43851807)
chr8 (125-185)||(25952890-25952950)
chr8 (126-185)||(35872361-35872420)
chr8 (43-105)||(2583422-2583484)
chr8 (55-121)||(5554955-5555021)
chr8 (43-121)||(21148150-21148228)
chr8 (64-121)||(21148023-21148080)
chr8 (64-121)||(26136920-26136977)
chr8 (64-121)||(30789593-30789650)
chr8 (128-185)||(33541315-33541372)
chr8 (61-121)||(5555101-5555161)
chr8 (45-121)||(22494471-22494546)
chr8 (126-185)||(13858394-13858451)
chr8 (126-184)||(27827363-27827419)
chr8 (126-185)||(28251470-28251529)
chr8 (126-185)||(41383035-41383094)
chr8 (67-113)||(17622981-17623027)
chr8 (43-121)||(17623101-17623179)
chr8 (35-121)||(30789713-30789799)
chr8 (35-121)||(42113190-42113276)
chr8 (64-121)||(14767593-14767650)
chr8 (126-182)||(43079980-43080034)
chr8 (126-185)||(3883495-3883552)
chr8 (135-179)||(14477630-14477674)
chr8 (126-185)||(15809596-15809653)
chr8 (126-185)||(28283121-28283178)
chr8 (126-185)||(41385117-41385177)
chr8 (126-185)||(43530493-43530550)
chr8 (89-121)||(43851820-43851852)
chr8 (126-185)||(44721221-44721278)
chr8 (126-157)||(1225536-1225567)
chr8 (126-184)||(27829674-27829730)
chr8 (126-183)||(3874371-3874426)
chr8 (43-121)||(14767721-14767799)
chr8 (43-121)||(26136771-26136849)
chr8 (64-106)||(42113085-42113127)
chr8 (43-121)||(43481528-43481606)
chr8 (64-121)||(2583555-2583612)
chr8 (126-182)||(43082351-43082405)
chr8 (89-121)||(7689713-7689745)
chr8 (126-174)||(27911450-27911497)
chr8 (126-174)||(27957869-27957916)
chr8 (127-185)||(32339688-32339745)
[»] chr4 (81 HSPs)
chr4 (126-185)||(6133206-6133265)
chr4 (126-185)||(14787334-14787393)
chr4 (126-185)||(14789333-14789392)
chr4 (126-185)||(24879361-24879420)
chr4 (126-184)||(49088925-49088983)
chr4 (128-185)||(22802637-22802694)
chr4 (126-183)||(27499417-27499474)
chr4 (64-121)||(38574054-38574111)
chr4 (126-185)||(2891661-2891720)
chr4 (126-185)||(4215672-4215731)
chr4 (126-184)||(33415395-33415454)
chr4 (126-185)||(36919489-36919548)
chr4 (126-185)||(36921398-36921457)
chr4 (126-185)||(47563128-47563187)
chr4 (43-121)||(3018098-3018176)
chr4 (43-121)||(4355967-4356045)
chr4 (126-184)||(37312985-37313043)
chr4 (64-121)||(9516696-9516753)
chr4 (64-121)||(13132027-13132084)
chr4 (64-121)||(46046510-46046567)
chr4 (128-184)||(22800766-22800822)
chr4 (41-121)||(37012919-37012999)
chr4 (126-185)||(16453677-16453736)
chr4 (126-185)||(24446562-24446621)
chr4 (126-173)||(36380717-36380764)
chr4 (126-185)||(38928084-38928143)
chr4 (126-185)||(48486690-48486749)
chr4 (35-121)||(3273708-3273794)
chr4 (126-184)||(5101285-5101343)
chr4 (43-121)||(9396785-9396863)
chr4 (24-121)||(18667375-18667473)
chr4 (16-121)||(26252354-26252460)
chr4 (43-121)||(34064196-34064274)
chr4 (127-185)||(40091320-40091378)
chr4 (43-121)||(46046638-46046716)
chr4 (64-121)||(3273855-3273912)
chr4 (64-121)||(4356116-4356173)
chr4 (64-113)||(7819249-7819298)
chr4 (126-179)||(24889167-24889220)
chr4 (64-121)||(31090147-31090204)
chr4 (64-121)||(31944185-31944242)
chr4 (64-121)||(37012793-37012850)
chr4 (41-121)||(13132153-13132233)
chr4 (126-185)||(22044291-22044348)
chr4 (126-185)||(22046586-22046643)
chr4 (126-185)||(36378660-36378718)
chr4 (43-121)||(15640801-15640879)
chr4 (43-121)||(18713046-18713124)
chr4 (126-185)||(24880823-24880884)
chr4 (126-185)||(40637445-40637506)
chr4 (20-121)||(48580056-48580158)
chr4 (68-121)||(9619218-9619271)
chr4 (127-179)||(13547524-13547577)
chr4 (64-121)||(26252472-26252529)
chr4 (21-121)||(38574159-38574260)
chr4 (64-121)||(48259986-48260043)
chr4 (126-185)||(9148611-9148668)
chr4 (126-185)||(28454054-28454110)
chr4 (126-185)||(37089272-37089329)
chr4 (126-185)||(51015621-51015678)
chr4 (126-170)||(52942406-52942450)
chr4 (127-185)||(5198781-5198837)
chr4 (127-185)||(9174045-9174101)
chr4 (126-185)||(17662150-17662209)
chr4 (127-185)||(31849498-31849554)
chr4 (35-121)||(9619066-9619151)
chr4 (64-121)||(3018247-3018304)
chr4 (64-121)||(9396934-9396991)
chr4 (64-121)||(15640950-15641007)
chr4 (127-184)||(18409254-18409309)
chr4 (64-121)||(18713195-18713252)
chr4 (68-121)||(35376367-35376420)
chr4 (126-182)||(47210699-47210753)
chr4 (67-120)||(50462634-50462687)
chr4 (126-185)||(2484773-2484830)
chr4 (126-185)||(5635376-5635433)
chr4 (89-121)||(7819204-7819236)
chr4 (89-121)||(9396889-9396921)
chr4 (126-185)||(18709063-18709120)
chr4 (89-121)||(38574124-38574156)
chr4 (89-121)||(46046580-46046612)
[»] chr7 (71 HSPs)
chr7 (126-184)||(26804836-26804894)
chr7 (126-185)||(22251490-22251549)
chr7 (126-185)||(42330906-42330965)
chr7 (21-121)||(38879915-38880016)
chr7 (64-121)||(48672365-48672422)
chr7 (126-185)||(21678387-21678446)
chr7 (126-185)||(42223481-42223540)
chr7 (43-121)||(1250420-1250498)
chr7 (126-184)||(13099378-13099436)
chr7 (64-121)||(12006626-12006683)
chr7 (64-121)||(23704896-23704953)
chr7 (64-121)||(25772449-25772506)
chr7 (16-121)||(25772518-25772623)
chr7 (64-121)||(38879810-38879867)
chr7 (126-185)||(9679384-9679444)
chr7 (65-121)||(28218265-28218321)
chr7 (126-185)||(21680353-21680412)
chr7 (126-185)||(37412027-37412086)
chr7 (126-185)||(39145891-39145950)
chr7 (126-184)||(44724902-44724961)
chr7 (126-184)||(443923-443981)
chr7 (127-185)||(4295841-4295899)
chr7 (59-121)||(16995285-16995347)
chr7 (126-184)||(27306137-27306195)
chr7 (64-113)||(10409609-10409658)
chr7 (64-121)||(20419622-20419679)
chr7 (64-121)||(20458777-20458834)
chr7 (64-121)||(24195031-24195088)
chr7 (64-121)||(41600044-41600101)
chr7 (64-121)||(44816921-44816978)
chr7 (126-185)||(1850313-1850370)
chr7 (126-174)||(11355584-11355632)
chr7 (126-185)||(26295769-26295826)
chr7 (126-185)||(28487885-28487942)
chr7 (126-185)||(48457985-48458042)
chr7 (126-185)||(31434953-31435012)
chr7 (127-185)||(43253416-43253472)
chr7 (43-121)||(6465940-6466018)
chr7 (124-185)||(16296933-16296991)
chr7 (43-121)||(31851453-31851531)
chr7 (127-179)||(9681146-9681199)
chr7 (126-179)||(21592055-21592107)
chr7 (64-121)||(23383586-23383643)
chr7 (64-121)||(31851325-31851382)
chr7 (24-113)||(48648424-48648513)
chr7 (126-185)||(3036056-3036113)
chr7 (126-185)||(7471880-7471937)
chr7 (126-185)||(9027093-9027150)
chr7 (126-185)||(11759459-11759516)
chr7 (126-185)||(20297694-20297751)
chr7 (126-185)||(20299792-20299849)
chr7 (126-185)||(21990475-21990535)
chr7 (126-185)||(38394318-38394375)
chr7 (126-185)||(7188862-7188918)
chr7 (126-184)||(18345873-18345929)
chr7 (127-185)||(40946663-40946719)
chr7 (35-113)||(7658175-7658253)
chr7 (43-121)||(20458905-20458983)
chr7 (64-113)||(1250300-1250349)
chr7 (126-182)||(7351554-7351608)
chr7 (126-185)||(35961-36018)
chr7 (126-185)||(44896-44953)
chr7 (126-185)||(7469922-7469979)
chr7 (89-121)||(10409564-10409596)
chr7 (89-121)||(12006696-12006728)
chr7 (89-121)||(20419692-20419724)
chr7 (45-121)||(23383716-23383792)
chr7 (126-185)||(28485897-28485954)
chr7 (126-185)||(40836643-40836700)
chr7 (89-121)||(41600114-41600146)
chr7 (89-121)||(48672435-48672467)
[»] chr5 (75 HSPs)
chr5 (35-121)||(7126123-7126209)
chr5 (126-185)||(2724208-2724267)
chr5 (126-185)||(17073202-17073261)
chr5 (126-185)||(17818395-17818454)
chr5 (126-185)||(26098191-26098250)
chr5 (126-185)||(41585640-41585699)
chr5 (35-121)||(17762368-17762454)
chr5 (126-184)||(18509223-18509281)
chr5 (126-184)||(40221844-40221902)
chr5 (126-185)||(6756807-6756866)
chr5 (126-185)||(12555818-12555877)
chr5 (126-185)||(20043304-20043363)
chr5 (126-185)||(20045301-20045360)
chr5 (13-76)||(20947058-20947121)
chr5 (130-185)||(34530619-34530674)
chr5 (43-121)||(14143987-14144065)
chr5 (16-121)||(14411783-14411889)
chr5 (126-184)||(18511117-18511175)
chr5 (55-121)||(24074389-24074455)
chr5 (126-184)||(26098046-26098104)
chr5 (43-121)||(29444892-29444970)
chr5 (64-121)||(993833-993890)
chr5 (64-121)||(24074537-24074594)
chr5 (126-179)||(39397916-39397969)
chr5 (126-174)||(24127171-24127219)
chr5 (126-185)||(1189512-1189571)
chr5 (126-185)||(36208888-36208947)
chr5 (24-121)||(4919184-4919282)
chr5 (126-176)||(18596960-18597010)
chr5 (126-184)||(21289074-21289132)
chr5 (64-121)||(4919076-4919133)
chr5 (64-121)||(6817208-6817265)
chr5 (64-121)||(7126003-7126060)
chr5 (128-185)||(10474228-10474285)
chr5 (64-121)||(20709298-20709355)
chr5 (64-121)||(23979136-23979193)
chr5 (68-121)||(24837255-24837308)
chr5 (126-182)||(31465896-31465953)
chr5 (126-185)||(2175223-2175280)
chr5 (41-113)||(24650911-24650983)
chr5 (126-185)||(10587137-10587194)
chr5 (43-121)||(6817335-6817413)
chr5 (43-121)||(18336554-18336632)
chr5 (126-184)||(25904418-25904476)
chr5 (43-121)||(27159171-27159249)
chr5 (55-121)||(31799866-31799932)
chr5 (64-121)||(14144136-14144193)
chr5 (127-185)||(21948348-21948408)
chr5 (64-121)||(24650786-24650843)
chr5 (64-121)||(30512373-30512430)
chr5 (64-121)||(30552713-30552770)
chr5 (126-183)||(37705689-37705746)
chr5 (64-121)||(41001439-41001496)
chr5 (126-170)||(2818253-2818297)
chr5 (126-185)||(4236950-4237007)
chr5 (126-174)||(6745385-6745433)
chr5 (126-185)||(6747621-6747683)
chr5 (43-103)||(22571291-22571351)
chr5 (126-185)||(25804346-25804403)
chr5 (126-185)||(38882410-38882467)
chr5 (126-185)||(38960031-38960088)
chr5 (126-185)||(39798352-39798409)
chr5 (126-185)||(658263-658322)
chr5 (126-185)||(16776476-16776534)
chr5 (126-185)||(18469331-18469388)
chr5 (126-179)||(2954729-2954783)
chr5 (124-185)||(20054149-20054207)
chr5 (43-121)||(24837383-24837461)
chr5 (64-121)||(27159076-27159133)
chr5 (126-182)||(39854801-39854858)
chr5 (126-170)||(20505765-20505809)
chr5 (89-121)||(24837325-24837357)
chr5 (126-185)||(25921373-25921430)
chr5 (126-185)||(31543056-31543113)
chr5 (126-185)||(36402230-36402290)
[»] chr3 (93 HSPs)
chr3 (126-184)||(1313702-1313760)
chr3 (126-184)||(53917567-53917625)
chr3 (126-185)||(27635558-27635617)
chr3 (126-185)||(47148798-47148857)
chr3 (126-185)||(48361571-48361630)
chr3 (126-184)||(12267880-12267938)
chr3 (43-121)||(14161957-14162035)
chr3 (126-184)||(43423369-43423427)
chr3 (43-121)||(52552902-52552980)
chr3 (126-184)||(53915399-53915457)
chr3 (64-121)||(14171672-14171729)
chr3 (126-185)||(28181299-28181358)
chr3 (126-185)||(54691476-54691535)
chr3 (43-121)||(5800691-5800769)
chr3 (126-184)||(8183040-8183098)
chr3 (126-184)||(43421321-43421379)
chr3 (126-184)||(51943668-51943726)
chr3 (127-181)||(53468360-53468414)
chr3 (126-182)||(6484653-6484710)
chr3 (64-121)||(30500127-30500184)
chr3 (126-179)||(32263947-32264000)
chr3 (64-121)||(45003731-45003788)
chr3 (64-121)||(49986763-49986820)
chr3 (133-185)||(1626586-1626638)
chr3 (126-174)||(3307055-3307103)
chr3 (126-185)||(32219382-32219442)
chr3 (126-185)||(6232094-6232153)
chr3 (126-185)||(36012124-36012183)
chr3 (126-185)||(47701577-47701636)
chr3 (126-185)||(53591478-53591537)
chr3 (64-121)||(4204794-4204851)
chr3 (43-120)||(4204922-4204999)
chr3 (126-179)||(4308188-4308241)
chr3 (64-121)||(9267061-9267118)
chr3 (64-121)||(19112851-19112908)
chr3 (64-121)||(20853782-20853839)
chr3 (64-121)||(33372640-33372696)
chr3 (64-121)||(35995764-35995821)
chr3 (64-121)||(52552778-52552835)
chr3 (126-185)||(3314980-3315040)
chr3 (126-182)||(3859812-3859867)
chr3 (126-185)||(10084287-10084344)
chr3 (126-185)||(10191210-10191267)
chr3 (45-121)||(14262252-14262328)
chr3 (126-185)||(18096800-18096860)
chr3 (126-185)||(18162960-18163020)
chr3 (45-121)||(38283636-38283712)
chr3 (61-121)||(43572623-43572683)
chr3 (126-182)||(45883238-45883294)
chr3 (126-185)||(880356-880415)
chr3 (126-185)||(5926669-5926727)
chr3 (126-185)||(15781174-15781233)
chr3 (127-185)||(24980007-24980066)
chr3 (126-185)||(27101082-27101141)
chr3 (126-187)||(25533727-25533786)
chr3 (64-121)||(14262122-14262179)
chr3 (64-121)||(15328695-15328752)
chr3 (64-121)||(16722226-16722283)
chr3 (64-121)||(17465454-17465511)
chr3 (64-121)||(21633131-21633188)
chr3 (64-121)||(38283785-38283842)
chr3 (126-186)||(4666809-4666869)
chr3 (126-185)||(5191953-5192010)
chr3 (126-185)||(10955925-10955982)
chr3 (126-185)||(18099070-18099130)
chr3 (89-121)||(33372596-33372628)
chr3 (126-174)||(39715761-39715809)
chr3 (126-185)||(41849355-41849412)
chr3 (89-121)||(45003686-45003718)
chr3 (126-185)||(880145-880204)
chr3 (126-185)||(9604506-9604565)
chr3 (126-185)||(23633746-23633803)
chr3 (126-185)||(43228588-43228646)
chr3 (43-121)||(15328546-15328624)
chr3 (43-121)||(16722077-16722155)
chr3 (43-121)||(19112979-19113057)
chr3 (43-121)||(20853910-20853988)
chr3 (43-121)||(21632982-21633060)
chr3 (126-179)||(25688066-25688120)
chr3 (127-185)||(26720850-26720906)
chr3 (43-121)||(30500255-30500333)
chr3 (55-121)||(35995904-35995970)
chr3 (43-121)||(45003582-45003660)
chr3 (64-121)||(5800840-5800897)
chr3 (126-183)||(5886499-5886555)
chr3 (126-183)||(5899972-5900028)
chr3 (64-121)||(14162106-14162163)
chr3 (126-185)||(456210-456267)
chr3 (126-185)||(458587-458644)
chr3 (126-185)||(1321781-1321838)
chr3 (126-185)||(10958221-10958278)
chr3 (89-121)||(17465524-17465556)
chr3 (89-121)||(47575428-47575460)
[»] chr2 (58 HSPs)
chr2 (43-121)||(33290135-33290213)
chr2 (16-121)||(26236213-26236318)
chr2 (45-121)||(13284624-13284700)
chr2 (126-185)||(42923411-42923471)
chr2 (126-185)||(7462850-7462909)
chr2 (126-185)||(19007931-19007990)
chr2 (126-181)||(28196926-28196981)
chr2 (126-184)||(22407360-22407418)
chr2 (35-120)||(20498832-20498917)
chr2 (126-185)||(3022463-3022522)
chr2 (126-185)||(22707656-22707715)
chr2 (126-185)||(28459097-28459156)
chr2 (126-184)||(17849408-17849466)
chr2 (43-121)||(22263405-22263483)
chr2 (43-121)||(23854880-23854958)
chr2 (43-121)||(26560768-26560846)
chr2 (64-121)||(15106302-15106359)
chr2 (64-113)||(17850680-17850729)
chr2 (64-121)||(22263277-22263334)
chr2 (126-182)||(34979497-34979553)
chr2 (126-185)||(14837559-14837618)
chr2 (126-185)||(38020371-38020430)
chr2 (127-185)||(5375250-5375308)
chr2 (126-184)||(22287242-22287300)
chr2 (43-121)||(42670933-42671011)
chr2 (64-121)||(17463326-17463383)
chr2 (64-121)||(19251705-19251762)
chr2 (64-121)||(23806187-23806244)
chr2 (64-121)||(26560640-26560697)
chr2 (64-121)||(30390545-30390602)
chr2 (126-175)||(44288982-44289031)
chr2 (126-186)||(6264052-6264112)
chr2 (126-186)||(15539433-15539493)
chr2 (126-185)||(6258722-6258781)
chr2 (126-185)||(22162929-22162988)
chr2 (126-178)||(23871107-23871161)
chr2 (43-113)||(23806046-23806116)
chr2 (35-121)||(39878188-39878274)
chr2 (64-121)||(26136052-26136109)
chr2 (64-121)||(26236330-26236387)
chr2 (134-174)||(11739492-11739532)
chr2 (66-122)||(12418960-12419016)
chr2 (66-122)||(12431020-12431076)
chr2 (126-185)||(13909945-13910002)
chr2 (43-107)||(17463191-17463255)
chr2 (126-185)||(21520594-21520654)
chr2 (126-185)||(24162123-24162180)
chr2 (126-185)||(45279901-45279958)
chr2 (66-121)||(30959909-30959964)
chr2 (43-121)||(26135903-26135981)
chr2 (126-180)||(38414092-38414146)
chr2 (75-121)||(42670805-42670851)
chr2 (64-121)||(13284494-13284551)
chr2 (89-121)||(15106257-15106289)
chr2 (89-121)||(17850742-17850774)
chr2 (126-185)||(17897156-17897212)
chr2 (89-121)||(26560710-26560742)
chr2 (126-185)||(27105095-27105152)
[»] scaffold0131 (1 HSPs)
scaffold0131 (126-185)||(14289-14348)
[»] chr6 (36 HSPs)
chr6 (127-185)||(15367380-15367438)
chr6 (16-121)||(32017691-32017796)
chr6 (64-121)||(33637763-33637820)
chr6 (126-185)||(15346694-15346753)
chr6 (126-181)||(25480228-25480283)
chr6 (126-180)||(3631849-3631903)
chr6 (126-184)||(24338356-24338414)
chr6 (43-121)||(30618048-30618126)
chr6 (126-184)||(30728730-30728788)
chr6 (64-121)||(18500400-18500457)
chr6 (64-121)||(24732173-24732230)
chr6 (64-121)||(33714573-33714630)
chr6 (126-185)||(3394717-3394777)
chr6 (126-185)||(3629771-3629831)
chr6 (126-185)||(11982931-11982990)
chr6 (126-184)||(1069624-1069682)
chr6 (43-121)||(9481268-9481346)
chr6 (126-179)||(9020279-9020332)
chr6 (64-121)||(9854122-9854179)
chr6 (64-121)||(14680968-14681025)
chr6 (127-185)||(4816130-4816186)
chr6 (43-121)||(10321945-10322023)
chr6 (43-113)||(14681096-14681166)
chr6 (16-113)||(33637653-33637751)
chr6 (64-121)||(10321816-10321873)
chr6 (68-121)||(26385364-26385417)
chr6 (64-121)||(32017622-32017679)
chr6 (126-185)||(3233627-3233687)
chr6 (126-185)||(14507076-14507133)
chr6 (127-185)||(20915256-20915312)
chr6 (55-121)||(2299535-2299601)
chr6 (35-84)||(3230069-3230118)
chr6 (64-121)||(9481417-9481474)
chr6 (89-121)||(3230019-3230051)
chr6 (126-185)||(28241221-28241278)
chr6 (21-76)||(33714678-33714734)
[»] scaffold0361 (1 HSPs)
scaffold0361 (64-121)||(4798-4855)
[»] scaffold0045 (1 HSPs)
scaffold0045 (126-185)||(85553-85613)
[»] scaffold0141 (1 HSPs)
scaffold0141 (64-113)||(8557-8606)
[»] scaffold0011 (1 HSPs)
scaffold0011 (126-184)||(35919-35978)
[»] scaffold0809 (1 HSPs)
scaffold0809 (55-121)||(1496-1562)
[»] scaffold1674 (1 HSPs)
scaffold1674 (126-185)||(1351-1408)
[»] scaffold0370 (1 HSPs)
scaffold0370 (127-185)||(1352-1408)
[»] scaffold0031 (1 HSPs)
scaffold0031 (126-180)||(79511-79566)
[»] scaffold0185 (2 HSPs)
scaffold0185 (43-121)||(4083-4161)
scaffold0185 (89-121)||(4025-4057)
[»] scaffold0176 (1 HSPs)
scaffold0176 (59-121)||(15862-15924)
[»] scaffold0154 (1 HSPs)
scaffold0154 (126-174)||(11387-11435)
[»] scaffold0127 (1 HSPs)
scaffold0127 (130-185)||(12774-12827)
[»] scaffold0038 (1 HSPs)
scaffold0038 (126-185)||(41383-41440)
[»] scaffold0004 (1 HSPs)
scaffold0004 (126-170)||(80185-80229)


Alignment Details
Target: chr1 (Bit Score: 133; Significance: 2e-69; HSPs: 86)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 13 - 185
Target Start/End: Original strand, 30780248 - 30780420
Alignment:
Q  13 gtgaaatgagagaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaa 112  Q
    |||||| ||| || ||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||    
T  30780248 gtgaaacgagggatcaaaagttgaggaatatgaaattacaatgacgtaatttatacagattctgctgacgtgattgaatgaaggatcaaaagtggaggaa 30780347  T
Q  113 tatgaaatttatcgttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  30780348 tatgaaatttatcgttttctacttttgatttgtgtttataattgtttcatacactttgttttggttgcttgat 30780420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 39711244 - 39711158
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||| || || |||||| |||||||||| ||||||||||||    
T  39711244 gaggaatatgaaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaatt 39711158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 31490227 - 31490286
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  31490227 gttttctacttttgacttgtgtttataattgtttcatacactttattttggttgcttgat 31490286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 17606480 - 17606394
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  |||||||||||| ||||||||||||||||| |  ||||||||| |||||||||| ||||||||||||    
T  17606480 gaggaatatgaaattacagggacgtaatttatacagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaatt 17606394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 25248517 - 25248459
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  25248517 gttttctacttttgacttttgtttataattgtttcatacactttgttttggttgcttga 25248459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 34749292 - 34749397
Alignment:
Q  16 aaatgagagaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatat 115  Q
    ||||||| |||||||||| ||||| | ||||||||||  || ||||||||||||||||||||||||||| || || |||| | |||||||||| |||| |    
T  34749292 aaatgagggaccaaaagtggaggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatct 34749391  T
Q  116 gaaatt 121  Q
    ||||||    
T  34749392 gaaatt 34749397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 16294163 - 16294239
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  ||||||||||||| ||||||||||||| ||||| ||| ||||| |||||||||||||||||||||||    
T  16294163 aaattacagggacgtaatttatgtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaatt 16294239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 23816205 - 23816264
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  23816205 gttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgat 23816264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50078755 - 50078696
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  50078755 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 50078696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 25251240 - 25251182
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  25251240 gttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttga 25251182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 31424981 - 31424923
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  31424981 gttttctacttttgacttgtgtttataattgtcccatacattttgttatggttgcttga 31424923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 14097935 - 14097875
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  14097935 gttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttgat 14097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 47451948 - 47452004
Alignment:
Q  128 tttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  47451948 tttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 47452004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 2949198 - 2949139
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  |||||||||| |||||||||||||||    
T  2949198 gttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgat 2949139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 4131341 - 4131282
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  4131341 gttttctatttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 4131282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 122
Target Start/End: Complemental strand, 8292968 - 8292889
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaattt 122  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||| | |||||||||| |||||||||||||    
T  8292968 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaattt 8292889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9241053 - 9240994
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||  |||| ||||||||||| |||||||||||||||||||||||||||    
T  9241053 gttttctacttttggtttgtatttataattgtttcatacactttgttttggttgcttgat 9240994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 17324389 - 17324448
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||| | |||||||||||||| ||||||||||||    
T  17324389 gttttctacttttggcttgtgtttataattttttcatacactttgttatggttgcttgat 17324448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 13215399 - 13215457
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||| ||||    
T  13215399 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttga 13215457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 18307424 - 18307478
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgc 180  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  18307424 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgc 18307478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 4907105 - 4907048
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||    
T  4907105 tatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 4907048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 20995903 - 20995960
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  20995903 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaatt 20995960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 25860368 - 25860315
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  25860368 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttg 25860315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 39826193 - 39826136
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||||    
T  39826193 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaatt 39826136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 50076639 - 50076583
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||| |||||||    
T  50076639 gttttctacttttaacttgtgtttataattgttccatacactttgttttagttgctt 50076583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 3579549 - 3579490
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  |||||||||| |||||||||| ||||    
T  3579549 gttttctacttttggcttgtgtttataattgttccatacactttattttggttgcctgat 3579490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 47906586 - 47906645
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||| ||||||||||||||    
T  47906586 gttttctacttttggcttgtgattataattgttccatacactttggtttggttgcttgat 47906645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50248536 - 50248477
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||| ||||||| |||||| ||||||||||  ||||||||||||||||||||||||||    
T  50248536 gttttcaacttttggcttgtggttataattgttccatacactttgttttggttgcttgat 50248477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 4907176 - 4907254
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||||| |||||||| |  || |||||| |||||||||| |||| |||||||    
T  4907176 tgaaattacagggacgtaatttatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 4907254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 6995659 - 6995601
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||| ||||  |||||||||||||||| ||||||||    
T  6995659 gttttctacttttggcttgtgtttatagttgttccatacactttgttttgattgcttga 6995601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 24467800 - 24467714
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| |||||||||||| ||||||||||||||||||||||  |||| || |  || |||||| |||||||||| |||| |||||||    
T  24467800 gaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaatt 24467714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 33628904 - 33628982
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||| ||||||||| |||||||||||||||| || || |||||| |||||||||| |||| |||||||    
T  33628904 tgaaattacagggacataatttatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaatt 33628982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 41647235 - 41647289
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttg 179  Q
    |||||||||||||||||||||||||||||| | |||||||||||| |||||||||    
T  41647235 gttttctacttttgacttgtgtttataattatttcatacactttgattttggttg 41647289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 8293042 - 8293099
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| |||||| |||| |||||||||| |||||||||| ||||||||||||    
T  8293042 tatgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaatt 8293099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 12302471 - 12302418
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggtt 178  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||    
T  12302471 gttttctacttttgacttgtgtttataattgttccatacactttgattttggtt 12302418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 13229966 - 13230023
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||| ||||||||    
T  13229966 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaagatgaaatt 13230023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 34749280 - 34749223
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| |||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  34749280 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 34749223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 39711307 - 39711364
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| |||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  39711307 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 39711364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 39970789 - 39970732
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||||||||||| |||||||||| |||||||||| |||| |||||||    
T  39970789 tatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 39970732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 27336904 - 27336844
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  27336904 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 27336844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 27339095 - 27339035
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  27339095 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 27339035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 28207032 - 28206972
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  28207032 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 28206972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Original strand, 29696794 - 29696850
Alignment:
Q  65 atgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||| ||||||| |||||||||| |||||||||| |||| |||||||    
T  29696794 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 29696850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 43539509 - 43539433
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  |||||||||||||||||||||||||||||| |  || |||||| ||||||||||  ||||| |||||    
T  43539509 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaatt 43539433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50307509 - 50307449
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  50307509 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 50307449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 11457441 - 11457382
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||| ||||||  |||| |||||||||||||||| ||||    
T  11457441 gttttctacttttggcttgtgtttaaaattgttccatatactttgttttggttgcctgat 11457382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 13229896 - 13229818
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||| || |||| || |  || ||| ||||||||||||| ||||||||||||    
T  13229896 tgaaattacagggacgtaatttatgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaatatgaaatt 13229818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 15916706 - 15916762
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||    
T  15916706 ttttctacttttggcttgtgtttataact-tc-catacactttgttttggttgcttgat 15916762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 17319203 - 17319261
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||||||||||| | |  |||||||||||||||||||| |||||    
T  17319203 ttttctacttttggcttgtgtttataactattccatacactttgttttggttgtttgat 17319261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 18462457 - 18462371
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| |||||||||||| ||||||||||||||||||||||  |||| || |  || |||||| ||||| |||| |||| |||||||    
T  18462457 gaggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaatt 18462371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 20995833 - 20995755
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  ||  ||||| |||||||| | |||||| |||||    
T  20995833 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtgaaagaatataaaatt 20995755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 48072125 - 48072047
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| |||||||||| ||| |  || |||||| ||||||||||  |||||||||||    
T  48072125 tgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggagcaaaagtggaataatatgaaatt 48072047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 7473935 - 7473878
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||  |||||||||  ||||||||| |||||||||| ||||||||||||    
T  7473935 tatgcagattcttttgacgtggtgaaatgagggaccaaaagtggaagaatatgaaatt 7473878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 24467862 - 24467919
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| ||||||||||  ||||||||| |||||||||| |||| |||||||    
T  24467862 tatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaatt 24467919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 42510157 - 42510100
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||| |||||  |||||||||  ||||||||| ||||||||||||    
T  42510157 tatgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaatt 42510100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 48072196 - 48072253
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  |||||||   |||||||||| ||||||||||||    
T  48072196 tatgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaatt 48072253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 52058154 - 52058097
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||| |||||  ||||||||| |||||||||| |||| |||||||    
T  52058154 tatgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaatt 52058097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9459393 - 9459336
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  9459393 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 9459336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9463220 - 9463163
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  9463220 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 9463163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 13447232 - 13447175
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  13447232 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 13447175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 13762158 - 13762215
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  13762158 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 13762215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 15294793 - 15294736
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  15294793 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 15294736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15823864 - 15823924
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||| |||||||||| ||||    
T  15823864 gttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgat 15823924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 28841001 - 28841058
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  28841001 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 28841058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 28842816 - 28842873
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  28842816 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 28842873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 28998216 - 28998172
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||||||||| |||||||||||||||||  |||||||||||    
T  28998216 gttttctacttttggcttgtgtttataattgttccatacactttg 28998172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 29003932 - 29003888
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||||||||| |||||||||||||||||  |||||||||||    
T  29003932 gttttctacttttggcttgtgtttataattgttccatacactttg 29003888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 39826206 - 39826238
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||||||||||    
T  39826206 aatgagggatcaaaagtggaggaatatgaaatt 39826238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 51750361 - 51750418
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  51750361 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 51750418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 157
Target Start/End: Original strand, 6756841 - 6756872
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgt 157  Q
    ||||||||||||||||||||||||||||||||    
T  6756841 gttttctacttttgacttgtgtttataattgt 6756872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 18800539 - 18800482
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||| | || |||||||||||||||| |||||||||    
T  18800539 gttttctacttttggcttgtgtttataact-tc-catacactttgttttgattgcttgat 18800482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 18839903 - 18839950
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttt 173  Q
    |||||||| ||||| |||||||||||||||||  ||||||||||||||    
T  18839903 gttttctagttttggcttgtgtttataattgttccatacactttgttt 18839950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 58 - 121
Target Start/End: Original strand, 42510243 - 42510306
Alignment:
Q  58 gtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||||| |  |||||||||  | ||||||| |||| |||||||    
T  42510243 gtaatttatgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctgaaatt 42510306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 7474018 - 7474080
Alignment:
Q  59 taatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| |||| | |||||| ||| ||||| ||||||| ||||||||| |||||    
T  7474018 taatttatgcagattttgctcaagtggttaaataagggaccaaaagtagaggaatatcaaatt 7474080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 121
Target Start/End: Original strand, 18342261 - 18342311
Alignment:
Q  71 attctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||| ||||||| ||||||||||  ||||||||| ||||||||||||    
T  18342261 attctgcttacgtggtggaatgagggactaaaagtggaagaatatgaaatt 18342311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 30299395 - 30299317
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||| |||||||| |||| || |  || ||| || |||||||||| ||||||||||||    
T  30299395 tgaaattacagggacgtaatttatggagattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaatt 30299317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 38925449 - 38925388
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg--ttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||| |||  |||||||||||  |||||||||| ||||    
T  38925449 gttttctacttttggcttgtgtttataaatgttccatacactttgatttttggttgcctgat 38925388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 39932398 - 39932454
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||||| | || ||||||||||||||||||||||||||    
T  39932398 ttttctacttttggcttgtatttataact-tc-catacactttgttttggttgcttgat 39932454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 17606543 - 17606600
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| ||| |||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  17606543 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 17606600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 18462519 - 18462576
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| |||||||||  |||||| || |||||||||| |||| |||||||    
T  18462519 tatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaatt 18462576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 30299466 - 30299515
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    |||||||||||| || ||||||| |||||||||| |||||||||| ||||    
T  30299466 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaat 30299515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 43539582 - 43539639
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| ||||||||||| |||| ||||| ||||| |||| |||| |||||||    
T  43539582 tatgcagattcggctgacgtggtggaataagggaccaaaactggaagaatttgaaatt 43539639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 152 - 185
Target Start/End: Original strand, 51752715 - 51752748
Alignment:
Q  152 aattgtctcatacactttgttttggttgcttgat 185  Q
    |||||| |||||||||||||||||||||||||||    
T  51752715 aattgtttcatacactttgttttggttgcttgat 51752748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 2510301 - 2510244
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||| ||||||||||| ||||  |||||  ||||||||||||||| ||||||||||    
T  2510301 gttttctatttttgacttgttttta--attgttccatacactttgttttcgttgcttgat 2510244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 39462836 - 39462880
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||| ||||| |||||||||||||||||  |||||||||||    
T  39462836 gttttctaattttggcttgtgtttataattgttccatacactttg 39462880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 46431664 - 46431607
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||| ||||||||||||||||||||    
T  46431664 gttttctacttttggcttgtattta--attgttccatacgctttgttttggttgcttgat 46431607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 50338 - 50397
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  50338 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgat 50397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 52337 - 52396
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  52337 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgat 52396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 14808132 - 14808191
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  14808132 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgat 14808191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 10108534 - 10108456
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||||||||    
T  10108534 tgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 10108456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 181848 - 181901
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||    
T  181848 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttg 181901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 7689758 - 7689815
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  7689758 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaatt 7689815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 126 - 178
Target Start/End: Complemental strand, 14419154 - 14419102
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggtt 178  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  14419154 gttttctacttttgacttgtgtttataattgttccatacactttgttttggtt 14419102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 21144721 - 21144797
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  ||||||||||||||||||||||||||||||||| ||| |||||  |||| ||||||||| |||||||    
T  21144721 aaattacagggacgtaatttatgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaatt 21144797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 30480467 - 30480408
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| |||||||||||  ||||||||||||||||||||||||||    
T  30480467 gttttctacttttggcttgtatttataattgttccatacactttgttttggttgcttgat 30480408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 36865910 - 36865969
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||    
T  36865910 gttttctacttttggcttttgtttataattgttccatacactttgttttggttgcttgat 36865969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 14820458 - 14820380
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||| ||| |  || |||||| |||||||||| ||||||||||||    
T  14820458 tgaaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 14820380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 15068353 - 15068411
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||||||||| |||||||  |||||||||||||||||||||||||    
T  15068353 gttttctacttttggcttgtgtttgtaattgttccatacactttgttttggttgcttga 15068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 15073083 - 15073141
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||| ||||||||    
T  15073083 gttttctacttttggcttgtgtttataattgttccatacactttgttttgattgcttga 15073141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 42605917 - 42605839
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| ||||| |||||||| || || |||||| |||||||||| ||||||||||||    
T  42605917 tgaaattacagggacgtaatttatgcatattctactgacgtgattaaaggagggaccaaaagtggaagaatatgaaatt 42605839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 10108605 - 10108662
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  10108605 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaatt 10108662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 14820529 - 14820586
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  14820529 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaatt 14820586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 26532926 - 26532869
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||||||||||||||||||||  ||| |||||||    
T  26532926 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaatt 26532869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 37214228 - 37214171
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttg 183  Q
    |||||||||||||| |||||||||||||||||   |||||||||||||||||||||||    
T  37214228 gttttctacttttggcttgtgtttataattgttctatacactttgttttggttgcttg 37214171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 43851807 - 43851750
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||| |||| |||||||    
T  43851807 tatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaatt 43851750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 25952890 - 25952950
Alignment:
Q  125 cgttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||  |||||||||||||||  ||||||||||| |||||||||||||||    
T  25952890 cgttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgat 25952950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 35872420 - 35872361
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||| |  |||||||||| |||||||||||||||    
T  35872420 gttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgat 35872361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 105
Target Start/End: Complemental strand, 2583484 - 2583422
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagt 105  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || ||||||||||||||    
T  2583484 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggatcaaaagt 2583422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 5555021 - 5554955
Alignment:
Q  55 gacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||||||| |  ||  ||||| |||||||||| ||||||||||||    
T  5555021 gacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaatt 5554955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 21148150 - 21148228
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||||||||||| || |  || ||||||  ||||||||| ||||||||||||    
T  21148150 tgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaatt 21148228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 21148080 - 21148023
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  21148080 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 21148023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 26136920 - 26136977
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| |||| |||||||    
T  26136920 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 26136977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 30789650 - 30789593
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||| |||||||  ||||||||||||||||||||||||| |||||||    
T  30789650 tatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaatt 30789593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 33541372 - 33541315
Alignment:
Q  128 tttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||| |||||||||||||||||  |||||||||| ||||| |||||||||    
T  33541372 tttctacttttggcttgtgtttataattgttccatacactttattttgattgcttgat 33541315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 5555101 - 5555161
Alignment:
Q  61 atttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| ||||||| |||| |||| ||||| |||||||||| ||||||||||||    
T  5555101 atttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaatt 5555161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 22494546 - 22494471
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  |||||||||||||||||||||||||||||| || || || ||| ||||| |||| ||||||||||||    
T  22494546 aaattacagggacgtaatttatgcagattctgctgacgtgatt-aaagaaggaccaaaaatggaagaatatgaaatt 22494471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 13858451 - 13858394
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||    
T  13858451 gttttctacttttggcttgtgtttataact-tc-catacactttgttttggttgcttgat 13858394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 27827363 - 27827419
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||||||||| ||||  |||||  |||||||||||||||||||||||||    
T  27827363 gttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttga 27827419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 28251529 - 28251470
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||| || |||||| ||||||||||  ||||||||||||||||||||| ||||    
T  28251529 gttttctacttgtggcttgtgattataattgttccatacactttgttttggttgcctgat 28251470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41383035 - 41383094
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||| || |||||||||||||||||  |||| ||||||||||| |||||||||    
T  41383035 gttttctacttctggcttgtgtttataattgttccataaactttgttttgattgcttgat 41383094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 67 - 113
Target Start/End: Complemental strand, 17623027 - 17622981
Alignment:
Q  67 gcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    |||||||||||||||||||| |||||||||| |||||||||| ||||    
T  17623027 gcagattctgctgacgtggtggaatgagggaccaaaagtggaagaat 17622981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 17623101 - 17623179
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||| |||||||||||||||||||||||||| |  || ||| || |||||||||| |||| |||||||    
T  17623101 tgaaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaatt 17623179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 30789713 - 30789799
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  ||||||||| ||||||||| |||||||||| |  || || ||| |||||||||| |||| |||||||    
T  30789713 gaggaatatgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaatt 30789799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 42113190 - 42113276
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  ||| ||||||||||||| | ||||||| || |  || ||||||||||||||||| |||| |||||||    
T  42113190 gaggaatatgaaattacagggacataatttatgcagaatttgctgacatgatgaaaggagggatcaaaagtggaagaatttgaaatt 42113276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 14767650 - 14767593
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||  ||| |||||||    
T  14767650 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaatt 14767593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 43079980 - 43080034
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    |||||||||||||||||||| |||||||   | ||||||||||||||||||||||||    
T  43079980 gttttctacttttgacttgtatttataa--ctttcatacactttgttttggttgctt 43080034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 3883552 - 3883495
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  3883552 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 3883495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 14477630 - 14477674
Alignment:
Q  135 ttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    ||||| ||||||||||| ||||| |||||||||||||||||||||    
T  14477630 ttttggcttgtgtttatgattgtttcatacactttgttttggttg 14477674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15809596 - 15809653
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||| ||||| ||||| ||||  ||||| |||||||||||||||||||||||||||    
T  15809596 gttttctatttttgccttgtattta--attgtttcatacactttgttttggttgcttgat 15809653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 28283178 - 28283121
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| |||||  || | |||||||||||||||||||||||||||    
T  28283178 gttttctacttttggcttgtatttat--ttttttcatacactttgttttggttgcttgat 28283121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41385117 - 41385177
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacac-tttgttttggttgcttgat 185  Q
    ||||| |||||||| |||||||||||||||||  ||||||| ||||||||||||| |||||    
T  41385117 gttttatacttttggcttgtgtttataattgttccatacacttttgttttggttgtttgat 41385177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 43530493 - 43530550
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  43530493 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 43530550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 43851820 - 43851852
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||||||||||    
T  43851820 aatgagggatcaaaagtggaggaatatgaaatt 43851852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 44721221 - 44721278
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||| ||||  ||| |  ||||||||||||||||||||||||||    
T  44721221 gttttctacttttgacttgtattta--attattccatacactttgttttggttgcttgat 44721278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 157
Target Start/End: Original strand, 1225536 - 1225567
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgt 157  Q
    ||||||||||||||||||||||||||||||||    
T  1225536 gttttctacttttgacttgtgtttataattgt 1225567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 27829674 - 27829730
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||||||| | ||||  |||||  |||||||||||||||||||||||||    
T  27829674 gttttctacttttgacttatattta--attgttccatacactttgttttggttgcttga 27829730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 3874371 - 3874426
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttg 183  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||    
T  3874371 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttg 3874426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 14767721 - 14767799
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||| ||||||| |  || ||||||   ||| |||| ||||||||||||    
T  14767721 tgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaatt 14767799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 26136849 - 26136771
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||| ||||||| || |  || |||| ||||||| |||| |||| |||||||    
T  26136849 tgaaattacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaatcaaaattggaagaatctgaaatt 26136771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 42113127 - 42113085
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtg 106  Q
    |||||||||||||||||||||||  ||||||||| ||||||||    
T  42113127 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtg 42113085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 43481528 - 43481606
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||| |||||||||| || || ||  || ||| |||||| |||| |||||||    
T  43481528 tgaaattacaaggacgtaatttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaatt 43481606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 2583555 - 2583612
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| ||||| ||||| |||||||| | |||||||||| |||| |||||||    
T  2583555 tatgcagattcggctgatgtggtggaatgaggaaccaaaagtggaagaatctgaaatt 2583612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 43082351 - 43082405
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    |||||||||||||| ||||| ||||||| | ||  ||||||||||||||||||||||    
T  43082351 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgctt 43082405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 7689745 - 7689713
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  7689745 aatgagggatcaaaagtggaggaatctgaaatt 7689713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 27911450 - 27911497
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||| ||||||||||||||||| ||  ||||||||||||    
T  27911450 gttttctacttttggcttgtgtttataattgt-tccaacactttgtttt 27911497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 27957869 - 27957916
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||| ||||||||||||||||| ||  ||||||||||||    
T  27957869 gttttctacttttggcttgtgtttataattgt-tccaacactttgtttt 27957916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 32339688 - 32339745
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||||||||||||| ||  |||||||  ||||||||||| |||||||||||||||    
T  32339688 ttttctacttttgacttgtatt--taattgttccatacactttgattttggttgcttgat 32339745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 6133206 - 6133265
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  6133206 gttttctacttttgacttgtgtttataattgtttcatacactttgtttcggttgcttgat 6133265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 14787393 - 14787334
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  14787393 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgat 14787334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 14789392 - 14789333
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  14789392 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttgat 14789333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 24879361 - 24879420
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  24879361 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 24879420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 49088925 - 49088983
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  49088925 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 49088983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 22802694 - 22802637
Alignment:
Q  128 tttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  22802694 tttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 22802637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 27499417 - 27499474
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttg 183  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  27499417 gttttctacttttgacttgtgtttataattgttccataaactttgttttggttgcttg 27499474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 38574111 - 38574054
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  38574111 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 38574054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 2891661 - 2891720
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  |||||||||| |||||||||||||||    
T  2891661 gttttctacttttggcttgtgtttataattgttccatacactttattttggttgcttgat 2891720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 4215672 - 4215731
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||| ||||||||||    
T  4215672 gttttctacttttggcttgtgattataattgtttcatacactttgtttttgttgcttgat 4215731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 33415454 - 33415395
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||    
T  33415454 gttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttga 33415395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 36919548 - 36919489
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||    
T  36919548 gttttctacttttgacttgtgtttataattgttccatacactttattttggttgcctgat 36919489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 36921457 - 36921398
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| ||||||||||| |||||||||| ||||    
T  36921457 gttttctacttttggcttgtgtttataattgtttcatacactttattttggttgcctgat 36921398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 47563128 - 47563187
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||| |||||||||||||  ||||||||||||||||||||||||||    
T  47563128 gttttctacttttggcttatgtttataattgttccatacactttgttttggttgcttgat 47563187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 3018176 - 3018098
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  | |||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||||||||    
T  3018176 tgaaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 3018098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 4356045 - 4355967
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||| ||||| |  ||||||||| |||||||| | ||||||||||||    
T  4356045 tgaaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaatt 4355967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 37313043 - 37312985
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||| || |||||||||| ||||||||||||||||||||||||||    
T  37313043 gttttctacttttggcttatgattataattgtttcatacactttgttttggttgcttga 37312985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 9516753 - 9516696
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  9516753 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 9516696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 13132084 - 13132027
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||    
T  13132084 tatgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaatt 13132027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 46046567 - 46046510
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| || ||||||| ||||||||||||||||||||| ||||||||||||    
T  46046567 tatgcagattctactaacgtggtggaatgagggatcaaaagtggaagaatatgaaatt 46046510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 22800822 - 22800766
Alignment:
Q  128 tttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||| |||||||||||||||||  |||| ||||||||||||||||||||    
T  22800822 tttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttga 22800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 37012919 - 37012999
Alignment:
Q  41 tatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||  ||||||||||||||||||| |||||||||| |  || ||| || |||||||||| ||||||||||||    
T  37012919 tatgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaatt 37012999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 16453677 - 16453736
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| |||||| ||| |||||||||||||||||||||| ||||    
T  16453677 gttttctacttttggcttgtgattataactgtttcatacactttgttttggttgcctgat 16453736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24446621 - 24446562
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||| |  |||||||||| |||||||||||||||    
T  24446621 gttttctacttttggcttgtgtttataatttttccatacactttattttggttgcttgat 24446562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 36380717 - 36380764
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttt 173  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||    
T  36380717 gttttctacttttggcttgtgtttataattgtttcatacactttgttt 36380764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 38928143 - 38928084
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| |||||| |||  ||||||||||||||||||||||||||    
T  38928143 gttttctacttttggcttgtgattataactgttccatacactttgttttggttgcttgat 38928084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 48486690 - 48486749
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||| ||||||||||| ||||||||||    
T  48486690 gttttctacttttggcttgtgtttataattgttccattcactttgttttagttgcttgat 48486749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 3273794 - 3273708
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  |||||||||||||||||||||  |||| || |  || |||||| |||||||||| ||||||||||||    
T  3273794 gaggaatatgaaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaatt 3273708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 5101285 - 5101343
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||| | |||| |||||||||||||||||  |||||||||||||||||||||||||    
T  5101285 gttttctccctttggcttgtgtttataattgttccatacactttgttttggttgcttga 5101343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 9396863 - 9396785
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| ||||||||||  ||| |||||||    
T  9396863 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaatt 9396785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 121
Target Start/End: Complemental strand, 18667473 - 18667375
Alignment:
Q  24 gaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| |||| | ||||||||||  ||||||||||||||||||| || ||||||| |  || |||||| ||||||||||  |||||||||||    
T  18667473 gaccaaaagttggaggaatctgaaattacagggacgtaatttatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaacaatatgaaatt 18667375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26252460 - 26252354
Alignment:
Q  16 aaatgagagaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaata 114  Q
    ||||||| |||||||||| | |||| | ||||||||||  |||||||||||||||||||||| |||| || |  || |||||| |||||||||| ||||     
T  26252460 aaatgagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatc 26252361  T
Q  115 tgaaatt 121  Q
    |||||||    
T  26252360 tgaaatt 26252354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 34064196 - 34064274
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  ||  ||||| |||||||||| |||| |||||||    
T  34064196 tgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaatt 34064274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 40091378 - 40091320
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||||||||||||| |  |||||||||| |||||||||||||||    
T  40091378 ttttctacttttggcttgtgtttataattattccatacactttattttggttgcttgat 40091320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 46046638 - 46046716
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||| ||||||||| |||||||||| |  || ||||||||||||||||| |||| |||||||    
T  46046638 tgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaatt 46046716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 3273855 - 3273912
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| ||||||||||  |||||||||||||||||||| |||| |||||||    
T  3273855 tatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaatt 3273912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 4356116 - 4356173
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  4356116 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaatt 4356173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 7819249 - 7819298
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  7819249 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaat 7819298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 24889167 - 24889220
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||||    
T  24889167 gttttctacttttggcttgtgattataattgttccatacactttgttttggttg 24889220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 31090204 - 31090147
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| |||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  31090204 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 31090147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 31944185 - 31944242
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||| ||||||||||||    
T  31944185 tatgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaatt 31944242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 37012850 - 37012793
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  37012850 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 37012793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 13132153 - 13132233
Alignment:
Q  41 tatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||  ||||||||||||||||||||||||||  || |  ||  ||||| |||||||||| ||||||||||||    
T  13132153 tatgaaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaatatgaaatt 13132233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 22044348 - 22044291
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||||||    
T  22044348 gttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgat 22044291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 22046643 - 22046586
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||| ||||  |||||  ||||||||||||||||||||||||||    
T  22046643 gttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgat 22046586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 36378660 - 36378718
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||   |||||||||||||||| |||||||||||| ||||||||||||||    
T  36378660 gttttctacttttcgtttgtgtttataattgtttcatacactttg-tttggttgcttgat 36378718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 15640879 - 15640801
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| |||||||||| ||| |  || |||||| |||||||| | ||||||||||||    
T  15640879 tgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaatt 15640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 18713124 - 18713046
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||| |||||||||| |  || |||||| ||||| ||||  |||||||||||    
T  18713124 tgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaatt 18713046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 24880823 - 24880884
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactt--tgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  | |||||||  |||||||||||||||||    
T  24880823 gttttctacttttggcttgtgtttataattgttccgtacactttgtgttttggttgcttgat 24880884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 40637445 - 40637506
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg--ttttggttgcttgat 185  Q
    |||||||||||||| |||||| ||||||||||  |||||||||||  |||||||||||||||    
T  40637445 gttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgat 40637506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 48580056 - 48580158
Alignment:
Q  20 gagagaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaa 118  Q
    |||||||||||||| | |||| | ||||||||||  ||||||||||||||| |||||||| | ||| |  || |||||| ||||||||||  ||||||||    
T  48580056 gagagaccaaaagtgggaggaatttgaaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaa 48580155  T
Q  119 att 121  Q
    |||    
T  48580156 att 48580158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 9619218 - 9619271
Alignment:
Q  68 cagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| ||||||| |||||| ||| |||||||||| ||||||||||||    
T  9619218 cagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaatt 9619271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 13547524 - 13547577
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttg 179  Q
    ||||||||||||| |||||||||||||||||  ||||||||||| |||||||||    
T  13547524 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttg 13547577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 26252472 - 26252529
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| |||| || ||||| |||| |||||||||| ||||||||||||    
T  26252472 tatgcagattctgcttacgtagtggaatgggggaccaaaagtggaagaatatgaaatt 26252529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 38574159 - 38574260
Alignment:
Q  21 agagaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaa 119  Q
    ||||||||||||| | |||| | ||||||||||  |||| |||| ||||||||| || ||||||| |  || |||||| |||||||||| ||||||||||    
T  38574159 agagaccaaaagtgggaggaatctgaaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaa 38574258  T
Q  120 tt 121  Q
    ||    
T  38574259 tt 38574260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 48259986 - 48260043
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||||||||| | ||||||| ||||||||||||| |||| |||||||    
T  48259986 tatgcagattatgctgacgtgatggaatgagcgatcaaaagtggaagaatttgaaatt 48260043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 9148611 - 9148668
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  9148611 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 9148668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 28454054 - 28454110
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||||  || ||||||||||||||| ||||||    
T  28454054 gttttctacttttg-cttgtgtttataattgtc--atccactttgttttggtttcttgat 28454110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 37089329 - 37089272
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  37089329 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 37089272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 51015621 - 51015678
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  51015621 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 51015678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 52942450 - 52942406
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||||||||| |||||||||||||||||  |||||||||||    
T  52942450 gttttctacttttggcttgtgtttataattgttccatacactttg 52942406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 5198781 - 5198837
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  5198781 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 5198837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 9174101 - 9174045
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||  ||| | |||||||||||||||||||||||||||    
T  9174101 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgat 9174045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 17662209 - 17662150
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| | |||| ||||||||||  ||||||||||| |||| |||||||||    
T  17662209 gttttctacttttggcatgtgattataattgttccatacactttggtttgattgcttgat 17662150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 31849554 - 31849498
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  31849554 ttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 31849498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 9619151 - 9619066
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  |||||| ||||||||||||||| |||| || |  || |||||| |||||||||| |||| |||||||    
T  9619151 gaggaatatgaaattacagggacgta-tttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaatt 9619066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 3018247 - 3018304
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||||||||||| |||| ||||| |||||||||  |||| |||||||    
T  3018247 tatgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaatt 3018304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 9396934 - 9396991
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||| | |||||| ||  |||||||||| |||| |||||||    
T  9396934 tatgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaatt 9396991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 15640950 - 15641007
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| ||||||||||||||||  ||||||| | |||||||||| |||| |||||||    
T  15640950 tatgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaatt 15641007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 18409309 - 18409254
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||| |||||| |||||| | || |||||||||||||||||||||||||    
T  18409309 ttttctacttttgtcttgtgattataact-tc-catacactttgttttggttgcttga 18409254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 18713195 - 18713252
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||| |||||||||||||||||| |||| ||||| ||||| |||| |||| |||||||    
T  18713195 tatgtagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaatt 18713252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 121
Target Start/End: Original strand, 35376367 - 35376420
Alignment:
Q  68 cagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| |||||||||||| |||||||||| |||||||||| || | |||||||    
T  35376367 cagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaatt 35376420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 47210753 - 47210699
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||||||||||||||||    
T  47210753 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgctt 47210699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 50462634 - 50462687
Alignment:
Q  67 gcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaat 120  Q
    ||||||||||||||| || || | |||||||||||||||||| |||| ||||||    
T  50462634 gcagattctgctgacatgttttagtgagggatcaaaagtggaagaatctgaaat 50462687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 2484830 - 2484773
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||| |||||||||||||||    
T  2484830 gttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgat 2484773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5635433 - 5635376
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||||||||||||| |||||    
T  5635433 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgattgat 5635376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 7819236 - 7819204
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  7819236 aatgagggaccaaaagtggaggaatatgaaatt 7819204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 9396921 - 9396889
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  9396921 aatgagggaccaaaagtggaggaatatgaaatt 9396889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 18709120 - 18709063
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||| ||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  18709120 gttttctactattggcttgtatttataactttc--atacactttgttttggttgcttgat 18709063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 38574124 - 38574156
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  38574124 aatgagggaccaaaagtggaggaatatgaaatt 38574156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 46046580 - 46046612
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  46046580 aatgagggatcaaaagtggaggaatctgaaatt 46046612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 26804836 - 26804894
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  26804836 gttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttga 26804894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 22251549 - 22251490
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  22251549 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttgat 22251490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 42330965 - 42330906
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  42330965 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 42330906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 38879915 - 38880016
Alignment:
Q  21 agagaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaa 119  Q
    ||||||||||||| | |||| ||||||||||||  |||||||||||||||||||||| |||| ||||  || |||||| |||||||||| |||| |||||    
T  38879915 agagaccaaaagtgggaggaatatgaaattacagggacgtaatttatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaa 38880014  T
Q  120 tt 121  Q
    ||    
T  38880015 tt 38880016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 48672422 - 48672365
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  48672422 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaatt 48672365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 21678387 - 21678446
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  | ||||||||||||||||||||||||    
T  21678387 gttttctacttttggcttgtgtttataattgttccttacactttgttttggttgcttgat 21678446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 42223481 - 42223540
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| | ||||||||| |||||||||||||||    
T  42223481 gttttctacttttgccttgtgtttataattgttttatacactttattttggttgcttgat 42223540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 1250420 - 1250498
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||||| |||||||| |  || |||||| |||||||||| ||||||||||||    
T  1250420 tgaaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 1250498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 13099436 - 13099378
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||| ||||    
T  13099436 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttga 13099378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 12006683 - 12006626
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| |||||||    
T  12006683 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaatt 12006626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 23704896 - 23704953
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  23704896 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 23704953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 25772506 - 25772449
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  25772506 tatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatgaaatt 25772449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 25772518 - 25772623
Alignment:
Q  16 aaatgagagaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatat 115  Q
    ||||||| |||||||||| ||||| | ||||||||||  |||||||||||||||||||||| |||| || |  || |||||| ||||||| || |||| |    
T  25772518 aaatgagggaccaaaagtggaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatct 25772617  T
Q  116 gaaatt 121  Q
    ||||||    
T  25772618 gaaatt 25772623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 38879867 - 38879810
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  38879867 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 38879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 9679384 - 9679444
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| ||||    
T  9679384 gttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgat 9679444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 28218321 - 28218265
Alignment:
Q  65 atgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||| |||||||||| |||||||||| |||| |||||||    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 28218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 21680353 - 21680412
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||| ||||| ||||    
T  21680353 gttttctacttttggcttgtgtttataattgttccatacactttgtttttgttgcatgat 21680412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 37412086 - 37412027
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||| ||||| |||||| ||||||||||  ||||||||||||||||||||||||||    
T  37412086 gttttctagttttggcttgtgattataattgttccatacactttgttttggttgcttgat 37412027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 39145950 - 39145891
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||  |||||||||||||||| | ||||| |||||||||||||||||||    
T  39145950 gttttctacttttggtttgtgtttataattgtttaatacaatttgttttggttgcttgat 39145891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 44724902 - 44724961
Alignment:
Q  126 gttttctacttttgacttgtgtttataat-tgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||| |||  |||||||||||||||||||||||||    
T  44724902 gttttctacttttggcttgtgtttataatatgttccatacactttgttttggttgcttga 44724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 443923 - 443981
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||| ||||||||||   ||||||||||||||||||||||||    
T  443923 gttttctacttttggcttgtgattataattgttcaatacactttgttttggttgcttga 443981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 4295899 - 4295841
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||||||||| |||||   |||||||||||||||||||||||||    
T  4295899 ttttctacttttggcttgtgtttattattgttctatacactttgttttggttgcttgat 4295841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 121
Target Start/End: Complemental strand, 16995347 - 16995285
Alignment:
Q  59 taatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| |||||||||||||||||||||| ||||| |||| |||||||||| |||| |||||||    
T  16995347 taattgatgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaatt 16995285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 27306195 - 27306137
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||| |||||| |||||| ||||||||||  |||||||||||||||||||||||||    
T  27306195 gttttcttcttttggcttgtgattataattgttccatacactttgttttggttgcttga 27306137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 10409609 - 10409658
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||    
T  10409609 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaat 10409658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20419679 - 20419622
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| ||||| |||| ||||||||||||    
T  20419679 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaatt 20419622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20458834 - 20458777
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| |||| |||||||    
T  20458834 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 20458777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 24195031 - 24195088
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||| | |||||||||| |||||||||| ||||||||||||    
T  24195031 tatgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaatt 24195088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 41600101 - 41600044
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||| |||| |||||||    
T  41600101 tatgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaatt 41600044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 44816978 - 44816921
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| |||| |||||||    
T  44816978 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 44816921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 1850313 - 1850370
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||||||    
T  1850313 gttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgat 1850370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 11355584 - 11355632
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||    
T  11355584 gttttctacttttggcttgtgtttataattgttccatacactttgtttt 11355632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 26295769 - 26295826
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||  | ||||||||||||||||| |||||||||    
T  26295769 gttttctacttttggcttgtgtttataat--tttcatacactttgttttgattgcttgat 26295826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 28487885 - 28487942
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||| ||||  |||||  ||||||||||||||||||||||||||    
T  28487885 gttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgat 28487942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 48457985 - 48458042
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||| ||||  |||||  ||||||||||||||||||||||||||    
T  48457985 gttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgat 48458042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 31435012 - 31434953
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  | |||||||| ||||| |||||||||    
T  31435012 gttttctacttttggcttgtgtttataattgttccttacactttattttgattgcttgat 31434953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 43253472 - 43253416
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||| ||||  |||||  ||||||||||||||||||||||||||    
T  43253472 ttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgat 43253416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 6466018 - 6465940
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||| ||||||||||||||||| |||||||| |  || |||||| |||||||||| |||| |||||||    
T  6466018 tgaaattacagggacataatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 6465940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 16296991 - 16296933
Alignment:
Q  124 tcgttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||| ||||||||||||||||||  |  ||||||||||||||||||||||    
T  16296991 tcgttttctacttttg-cttgtgtttataattgtc--agccactttgttttggttgcttgat 16296933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 31851453 - 31851531
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| |||||||||| ||| |  || ||| || |||||||||| ||||||||||||    
T  31851453 tgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatgaaatt 31851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 9681146 - 9681199
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttg 179  Q
    ||||||||||||| |||||||||||||||||  ||||||||||| |||||||||    
T  9681146 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttg 9681199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 21592107 - 21592055
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| |||||||||||||||||  |||||||||| |||||||||    
T  21592107 gttttctacttttggcttgtgtttataattgttccatacacttt-ttttggttg 21592055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 23383643 - 23383586
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| ||||||||||  |||| |||| ||||||||||||    
T  23383643 tatgcagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaatt 23383586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 31851382 - 31851325
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  || ||| |||||||||||||  |||||||||||    
T  31851382 tatgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaatt 31851325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 48648424 - 48648513
Alignment:
Q  24 gaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    |||||||| | ||||| | ||||||||||  |||||||||||||||||||||| ||||||| |  || |||||| || ||||||| ||||    
T  48648424 gaccaaaattggaggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaat 48648513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3036056 - 3036113
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  3036056 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 3036113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 7471937 - 7471880
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  7471937 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 7471880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9027150 - 9027093
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  9027150 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 9027093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 11759459 - 11759516
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  11759459 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 11759516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20297694 - 20297751
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  20297694 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 20297751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20299792 - 20299849
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  20299792 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 20299849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 21990475 - 21990535
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||| ||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  21990475 gtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 21990535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 38394318 - 38394375
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  38394318 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 38394375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 7188862 - 7188918
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||    
T  7188862 gttttctacttttg-cttgtgtttataact-tc-catacactttgttttggttgcttgat 7188918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 18345873 - 18345929
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||||||||||||||||||    
T  18345873 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttga 18345929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 40946663 - 40946719
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||| ||||| ||||| ||||  ||||| |||||||||||||||||||||||||||    
T  40946663 ttttctatttttggcttgtattta--attgtttcatacactttgttttggttgcttgat 40946719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 113
Target Start/End: Original strand, 7658175 - 7658253
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||| ||||||||||||  ||| ||||||||||||||| |||||||||| |  || ||| || |||||||||| ||||    
T  7658175 gaggaatatgaaattacagggacataatttatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaat 7658253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 20458905 - 20458983
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| |||||| |||| || |  || |||||| |||||||||| |||| |||||||    
T  20458905 tgaaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggagggaccaaaagtggaagaatctgaaatt 20458983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 1250349 - 1250300
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||| ||||||||||| ||||||| || |||||||||| ||||    
T  1250349 tatgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaat 1250300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 7351608 - 7351554
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    |||||||||||||| ||||| ||||||| | ||  ||||||||||||||||||||||    
T  7351608 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgctt 7351554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 35961 - 36018
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||  |||| ||||  |||||  ||||||||||||||||||||||||||    
T  35961 gttttctacttttggtttgtattta--attgttccatacactttgttttggttgcttgat 36018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 44896 - 44953
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||  ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  44896 gttttctactttttgcttgtattta--attgttccatacactttgttttggttgcttgat 44953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 7469979 - 7469922
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||| ||||||||||    
T  7469979 gttttctacttttggcttgtattta--attgttccatacactttgttttagttgcttgat 7469922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 10409596 - 10409564
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  10409596 aatgagggatcaaaagtggaggaatctgaaatt 10409564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 12006696 - 12006728
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  12006696 aatgagggatcaaaagtggaggaatctgaaatt 12006728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 20419692 - 20419724
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  20419692 aatgagggaccaaaagtggaggaatatgaaatt 20419724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 23383716 - 23383792
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  |||||| ||||||||||||||| |||| || |  || |||||| |||| ||||| ||||||||||||    
T  23383716 aaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaatt 23383792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 28485897 - 28485954
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||| |||||||||||||||||||    
T  28485897 gttttctacttttggcttgtattta--attgttccatacattttgttttggttgcttgat 28485954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 40836700 - 40836643
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||||||||||||| |||||    
T  40836700 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgtttgat 40836643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 41600114 - 41600146
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  41600114 aatgagggatcaaaagtggaggaatctgaaatt 41600146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 48672435 - 48672467
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  48672435 aatgagggatcaaaagtggaggaatctgaaatt 48672467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 75)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 7126123 - 7126209
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  |||||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||||||||    
T  7126123 gaggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 7126209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 2724208 - 2724267
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  2724208 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 2724267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 17073202 - 17073261
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  17073202 gttttctacttttgacttgtgtttataattgttccatacactttgttttagttgcttgat 17073261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 17818454 - 17818395
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  17818454 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 17818395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 26098250 - 26098191
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  26098250 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 26098191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 41585699 - 41585640
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  41585699 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 41585640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 17762454 - 17762368
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  |||||||||||||||||||||||| ||||| || || |||||| |||||||||| |||| |||||||    
T  17762454 gaggaatatgaaattacagggacgtaatttatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaatt 17762368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 18509281 - 18509223
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||    
T  18509281 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgtttga 18509223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 40221844 - 40221902
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  40221844 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 40221902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 6756807 - 6756866
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||| |||| ||||    
T  6756807 gttttctacttttggcttgtgtttataattgtttcatacactttgttttgattgcctgat 6756866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 12555877 - 12555818
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| |||||||||| ||||||||||| |||||||||||||||    
T  12555877 gttttctacttttggcttgtgattataattgtttcatacactttattttggttgcttgat 12555818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20043304 - 20043363
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||| ||||||||    
T  20043304 gttttctacttttggcttgtgtttataattgttccatacactttgttttggctgcttgat 20043363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 20045301 - 20045360
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||| |||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  20045301 gttttttacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 20045360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 76
Target Start/End: Original strand, 20947058 - 20947121
Alignment:
Q  13 gtgaaatgagagaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctg 76  Q
    |||||||||| |||||||||| ||||| | |||||||||||||| |||||||||||||||||||    
T  20947058 gtgaaatgagtgaccaaaagtggaggaatctgaaattacattgaggtaatttatgcagattctg 20947121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 34530674 - 34530619
Alignment:
Q  130 tctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||    
T  34530674 tctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgat 34530619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 14144065 - 14143987
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||||| |||||||| |  ||||||| | |||||||||| ||||||||||||    
T  14144065 tgaaattacagggacgtaatttatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaatt 14143987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 14411889 - 14411783
Alignment:
Q  16 aaatgagagaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaata 114  Q
    ||||||| |||||||||| | |||| | ||||||||||  ||||||||||||||| |||||||||||||| |  || |||||| |||||||||| ||||     
T  14411889 aaatgagggaccaaaagtgggaggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatc 14411790  T
Q  115 tgaaatt 121  Q
    |||||||    
T  14411789 tgaaatt 14411783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 18511175 - 18511117
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||    
T  18511175 gttttctactttttgcttgtgtttataattgtttcatacactttgttttagttgcttga 18511117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 24074455 - 24074389
Alignment:
Q  55 gacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||||||||    
T  24074455 gacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 24074389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 26098046 - 26098104
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||    
T  26098046 gttttctacttttggctagtgtttataattgttccatacactttgttttggttgcttga 26098104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 29444970 - 29444892
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| ||||||| || ||||||||||||    
T  29444970 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaatt 29444892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 993890 - 993833
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  993890 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 993833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 24074537 - 24074594
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||    
T  24074537 tatgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaatt 24074594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 39397969 - 39397916
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||||    
T  39397969 gttttctacttttggcttgagtttataattgtttcatacactttgttttggttg 39397916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 24127171 - 24127219
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  24127171 gttttctacttttgacttatgtttataattgtttcatacactttgtttt 24127219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1189571 - 1189512
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  |||||| ||||||||||| |||||||    
T  1189571 gttttctacttttggcttgtgtttataattgttccatacattttgttttggtggcttgat 1189512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 36208888 - 36208947
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| ||||||||||   |||||||||||||||||||||||||    
T  36208888 gttttctacttttggcttgtgattataattgttctatacactttgttttggttgcttgat 36208947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 121
Target Start/End: Original strand, 4919184 - 4919282
Alignment:
Q  24 gaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| |||| ||||||||||||  ||||||||||||||| |||||| |||| || |  || |||||||||||||| || |||| |||||||    
T  4919184 gaccaaaagttggaggaatatgaaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggagggatcaaaagtagaagaatctgaaatt 4919282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 18596960 - 18597010
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttgg 176  Q
    ||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  18596960 gttttctacttttgacttgtgtttataattgttccatacactttattttgg 18597010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 21289074 - 21289132
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||||||||||| ||| |  |||||||||||||||||||||||||    
T  21289074 gttttctacttttggcttgtgtttattattcttccatacactttgttttggttgcttga 21289132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 4919133 - 4919076
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| |||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  4919133 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 4919076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 6817265 - 6817208
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  ||||||||| |||||||||| |||| |||||||    
T  6817265 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaatt 6817208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 7126060 - 7126003
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  7126060 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 7126003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 10474285 - 10474228
Alignment:
Q  128 tttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||  |||||||||||||||||  ||||||||||||||||||| ||||||    
T  10474285 tttctacttttcgcttgtgtttataattgttccatacactttgttttggttacttgat 10474228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20709355 - 20709298
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  ||||||||| |||||||||| |||| |||||||    
T  20709355 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaatt 20709298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 23979136 - 23979193
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  ||||||||| |||||||||| |||| |||||||    
T  23979136 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaatt 23979193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 24837308 - 24837255
Alignment:
Q  68 cagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  24837308 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 24837255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 31465953 - 31465896
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgctt 182  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||    
T  31465953 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgctt 31465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 2175223 - 2175280
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  ||||| |||||||||||||||||||||||||||    
T  2175223 gttttctacttttggcttgtattta--attgtttcatacactttgttttggttgcttgat 2175280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 113
Target Start/End: Original strand, 24650911 - 24650983
Alignment:
Q  41 tatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||||  || ||||||||||| ||||||||||||||| |  || ||||||||||||||||| ||||    
T  24650911 tatgaaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaat 24650983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 10587137 - 10587194
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||| ||||||| | || ||||||||||||||||||||||||||    
T  10587137 gttttctacttttgacttgtatttataact-tc-catacactttgttttggttgcttgat 10587194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 6817335 - 6817413
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| |||||||||| ||| |  || ||| || |||||||||| ||||||||||||    
T  6817335 tgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaatt 6817413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 18336632 - 18336554
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||| |||||||||| ||| |  || ||||||||||||| ||| |||| |||||||    
T  18336632 tgaaattacagggacgtaatttatgcaaattctgctgatgtgatgaaaggagggatcaaaagcggaagaatctgaaatt 18336554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 25904418 - 25904476
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||||  ||||||||||||||||  |||||||||||||||  ||||||||    
T  25904418 gttttctacttttggtttgtgtttataattgttccatacactttgttttcattgcttga 25904476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 27159171 - 27159249
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  ||  ||||| ||||| |||| |||||| |||||    
T  27159171 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaatt 27159249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 31799866 - 31799932
Alignment:
Q  55 gacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| |||||||||||||| |  || ||||||||||||| ||| |||| |||||||    
T  31799866 gacgtaatttatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaatt 31799932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 14144136 - 14144193
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| ||||||||| |||| ||||| |||||||||| |||| |||||||    
T  14144136 tatgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaatt 14144193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 21948348 - 21948408
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactt--tgttttggttgcttgat 185  Q
    ||||||||||||| |||||||||||||||||  |||||||||  | |||||||||||||||    
T  21948348 ttttctacttttggcttgtgtttataattgttccatacactttattttttggttgcttgat 21948408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 24650843 - 24650786
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||||||||||| |||||||  | |||||||||| ||||||||||||    
T  24650843 tatgcagattttgctgacgtggtggaatgagctaccaaaagtggaagaatatgaaatt 24650786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 30512430 - 30512373
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||  ||| |||||||    
T  30512430 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaatt 30512373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 30552770 - 30552713
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| ||||||||||  ||| |||||||    
T  30552770 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaatt 30552713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 37705746 - 37705689
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttg 183  Q
    |||||||||||||| ||||||||| ||||| |  |||| |||||||||||||||||||    
T  37705746 gttttctacttttggcttgtgtttttaattattccatatactttgttttggttgcttg 37705689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 41001496 - 41001439
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| || |||| |||||| ||| |||||||||| ||||||||||||    
T  41001496 tatgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaatt 41001439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 2818297 - 2818253
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||||||||| |||||||||||||||||  |||||||||||    
T  2818297 gttttctacttttggcttgtgtttataattgttccatacactttg 2818253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 4236950 - 4237007
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  4236950 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 4237007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 6745385 - 6745433
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||||||    
T  6745385 gttttcgacttttggcttgtgtttataattgttccatacactttgtttt 6745433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 6747621 - 6747683
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg---ttttggttgcttgat 185  Q
    |||||| ||||||| |||||||||||||||||  |||||||||||   |||||||||||||||    
T  6747621 gttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgat 6747683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 22571291 - 22571351
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaa 103  Q
    ||||||||||  ||||||||||||||||||| || |||||||||  ||||||||| |||||    
T  22571291 tgaaattacagggacgtaatttatgcagattttgttgacgtggtgaaatgagggagcaaaa 22571351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 25804346 - 25804403
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  25804346 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 25804403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 38882410 - 38882467
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  38882410 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 38882467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 38960088 - 38960031
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  38960088 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 38960031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 39798352 - 39798409
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  39798352 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 39798409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 658322 - 658263
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||| ||||||| |||||  | ||||||||||||||||||| ||||    
T  658322 gttttctacttttggcttatgtttattattgttccgtacactttgttttggttgcctgat 658263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 16776476 - 16776534
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| || |||||||| ||||||||||||||||| |||| ||||    
T  16776476 gttttctacttttggcttgtatt-ataattgtttcatacactttgttttgattgcctgat 16776534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 18469331 - 18469388
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | || ||||||||||||||||||||||||||    
T  18469331 gttttctacttttggcttgtatttataact-tc-catacactttgttttggttgcttgat 18469388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 2954729 - 2954783
Alignment:
Q  126 gttttctacttttgacttgtgttt-ataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| ||||||||  ||||||||  ||||||||||||||||||||    
T  2954729 gttttctacttttggcttgtgttacataattgttccatacactttgttttggttg 2954783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 20054149 - 20054207
Alignment:
Q  124 tcgttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||  |||||||||||| | ||  |||||||||||||||||||||||||    
T  20054149 tcgttttctacttttgt-ttgtgtttataactttc--atacactttgttttggttgcttgat 20054207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 24837383 - 24837461
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||| |||| || |  || |||||| ||||||| || |||| |||||||    
T  24837383 tgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggagcaaaagtagaagaatttgaaatt 24837461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 27159133 - 27159076
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||| ||||| |||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  27159133 tatgtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 27159076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 39854801 - 39854858
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacacttt-gttttggttgctt 182  Q
    ||||| |||||||| |||||||||||||||||  ||||||||||  ||||||||||||    
T  39854801 gttttttacttttggcttgtgtttataattgttccatacactttatttttggttgctt 39854858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 20505809 - 20505765
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||| ||||| |||||||||||||||||  |||||||||||    
T  20505809 gttttctagttttggcttgtgtttataattgttccatacactttg 20505765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 24837325 - 24837357
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  24837325 aatgagggatcaaaagtggaggaatctgaaatt 24837357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 25921430 - 25921373
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||| |||||||||||||||    
T  25921430 gttttctacttttggcttgtattta--attgttccatacactttattttggttgcttgat 25921373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 31543056 - 31543113
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||| ||||||||||||||||||||    
T  31543056 gttttctacttttggcttgtatttataactttc--atacgctttgttttggttgcttgat 31543113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 36402290 - 36402230
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||  |||||||||||||||||   |||||||||| |||||||||| ||||    
T  36402290 gttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgat 36402230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 2e-20; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 1313702 - 1313760
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1313702 gttttctacttttgacttgtgtttataattgttccatacactttgttttggttgcttga 1313760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 53917625 - 53917567
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  53917625 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgcttga 53917567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 27635617 - 27635558
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  27635617 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 27635558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 47148857 - 47148798
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||||    
T  47148857 gttttctacttttgacttgtgtttataattgttccatacactttgttttggttgtttgat 47148798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 48361630 - 48361571
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||||||    
T  48361630 gttttctacttttgacttgtgattataattgttccatacactttgttttggttgcttgat 48361571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 12267938 - 12267880
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  12267938 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 12267880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 14162035 - 14161957
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||||||||    
T  14162035 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 14161957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 43423427 - 43423369
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  43423427 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 43423369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 52552902 - 52552980
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| |||||||||| ||||||||||||    
T  52552902 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 52552980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 53915457 - 53915399
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||||    
T  53915457 gttttctacttttggcttgtgtttataattgtttcatacacttggttttggttgcttga 53915399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 14171729 - 14171672
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  14171729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaatt 14171672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 28181299 - 28181358
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||| |||||    
T  28181299 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgtttgat 28181358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 54691535 - 54691476
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||| ||||    
T  54691535 gttttctacttttggcttgtgtttataattgtttcatacattttgttttggttgcctgat 54691476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 5800769 - 5800691
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| ||||| |||| ||||||||||||    
T  5800769 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaatt 5800691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 8183098 - 8183040
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||||||||||||||||||||||  ||||||| || ||||||||||||||    
T  8183098 gttttctacttttgacttgtgtttataattgttccatacaccttattttggttgcttga 8183040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 43421379 - 43421321
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  43421379 gttttatacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 43421321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 51943668 - 51943726
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  || ||||||||||||||||||||||    
T  51943668 gttttctacttttggcttgtgtttataattgttccaaacactttgttttggttgcttga 51943726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 53468414 - 53468360
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgct 181  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| ||||    
T  53468414 ttttctacttttgacttgtgtttataattgttccatacactttgttttggctgct 53468360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 6484653 - 6484710
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgctt 182  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||    
T  6484653 gttttctacttttgacttgtgtttataattgttccatacactttgattttggttgctt 6484710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 30500184 - 30500127
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  30500184 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaatt 30500127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 32264000 - 32263947
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  32264000 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttg 32263947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 45003731 - 45003788
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  45003731 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 45003788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 49986763 - 49986820
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  49986763 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 49986820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 1626638 - 1626586
Alignment:
Q  133 acttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  1626638 acttttgacttgtgtttataattgttccatacactttgtttttgttgcttgat 1626586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 3307055 - 3307103
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  3307055 gttttctacttttggcttgtgtttataattgtttcatacactttgtttt 3307103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 32219382 - 32219442
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||    
T  32219382 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttgat 32219442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 6232094 - 6232153
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||| || |||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  6232094 gttttttatttttgacttgtgtttataattgttccatacactttattttggttgcttgat 6232153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 36012124 - 36012183
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||  |||||||||||||||||  |||||||||||||||||||| |||||    
T  36012124 gttttctacttttcgcttgtgtttataattgttccatacactttgttttggttgtttgat 36012183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 47701636 - 47701577
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||| ||||||||  ||||||||||||||| ||||||||||    
T  47701636 gttttctacttttggcttgtgttcataattgttccatacactttgttttcgttgcttgat 47701577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 53591478 - 53591537
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||| |||||||||| |||||||||||||  |||||| |||||||||||||||||||    
T  53591478 gttttctgcttttgacttatgtttataattgttccatacattttgttttggttgcttgat 53591537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 4204851 - 4204794
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  ||||||||| |||||||||| |||| |||||||    
T  4204851 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaatt 4204794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 4204922 - 4204999
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaat 120  Q
    |||||||| || || |||||||||||||||||| |||||||| |  || ||||||||||||||||| |||| ||||||    
T  4204922 tgaaattatatggatgtaatttatgcagattctactgacgtgataaaaagagggatcaaaagtggaagaatctgaaat 4204999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 4308241 - 4308188
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||||||||||||    
T  4308241 gttttctacttttggcttgtgattataattgttccatacactttgttttggttg 4308188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 9267118 - 9267061
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||| | |||||||||| |||||||||| ||||||||||||    
T  9267118 tatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaatt 9267061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 19112908 - 19112851
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||    
T  19112908 tatgcagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaatt 19112851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 20853839 - 20853782
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| || ||||||| |||||||||| |||||||||| ||||||||||||    
T  20853839 tatgcagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 20853782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 33372640 - 33372696
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||| |||||||    
T  33372640 tatgcagattctgctgacgtggtggaatg-gggatcaaaagtggaagaatctgaaatt 33372696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 35995821 - 35995764
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| |||| |||||||    
T  35995821 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 35995764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 52552835 - 52552778
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||| |||| |||| |||||||||||||||| |||| |||||||    
T  52552835 tatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaatt 52552778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3314980 - 3315040
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||| |||| |||||||||||||||||  ||||||||||| |||||||||||||||    
T  3314980 gttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgat 3315040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 3859812 - 3859867
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    |||||||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||    
T  3859812 gttttctacttttggcttgtattt-taattgtttcatacactttgttttggttgctt 3859867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 10084344 - 10084287
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||| ||||||||||||||||||||||||||    
T  10084344 gttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgat 10084287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 10191267 - 10191210
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||| ||||||||||||||||||||||||||    
T  10191267 gttttctacttttggcttgtattta--attgtcccatacactttgttttggttgcttgat 10191210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 14262252 - 14262328
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  |||||||||||||||||||||||||||||| |  || ||||||  |||||||||  |||||||||||    
T  14262252 aaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaatt 14262328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 18096860 - 18096800
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  18096860 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 18096800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 18162960 - 18163020
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  18162960 gttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 18163020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 45 - 121
Target Start/End: Complemental strand, 38283712 - 38283636
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  ||||||| ||||| |||||||||||||||| |  || |||||||||||||||||  |||||||||||    
T  38283712 aaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaatt 38283636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 121
Target Start/End: Original strand, 43572623 - 43572683
Alignment:
Q  61 atttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||||||||||  ||||||||| |||||||||| |||| |||||||    
T  43572623 atttacgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaatt 43572683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 45883238 - 45883294
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    ||||||||||| || |||||| ||||||||||  |||||||||||||||||||||||    
T  45883238 gttttctacttctggcttgtgattataattgttccatacactttgttttggttgctt 45883294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 880415 - 880356
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||  ||||| |||||| |||  ||||||||||||||||||||||||||    
T  880415 gttttctacttttggtttgtgattataactgttccatacactttgttttggttgcttgat 880356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 5926727 - 5926669
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  | ||||||||||||||||| ||||||    
T  5926727 gttttctacttttg-cttgtgtttataattgttccttacactttgttttggttacttgat 5926669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15781174 - 15781233
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||||||||||||||||| |||  |||||||||| |||||  ||||||||    
T  15781174 gttttctacttttgacttgtgtttataactgttccatacactttattttgcctgcttgat 15781233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 24980007 - 24980066
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||||||| |||||||||||||||||  ||||||||||| |||||||||| ||||    
T  24980007 ttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgat 24980066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 27101141 - 27101082
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||  |||||| ||||||||||  ||||||||||||||||||||| ||||    
T  27101141 gttttctactttttgcttgtgattataattgttccatacactttgttttggttgcctgat 27101082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 25533727 - 25533786
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgatat 187  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||||    
T  25533727 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgatat 25533786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 14262179 - 14262122
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||| ||||| |||| ||||| |||||||||| |||| |||||||    
T  14262179 tatgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaatt 14262122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 15328695 - 15328752
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||  ||| |||||||    
T  15328695 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaatt 15328752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 16722226 - 16722283
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| || |||| |||| ||||| |||||||||| ||||||||||||    
T  16722226 tatgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaatt 16722283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 17465511 - 17465454
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| ||||||| |||||||| |||| |||| |||||||    
T  17465511 tatgcagattctgcttacgtggtggaatgagagatcaaaaatggaagaatctgaaatt 17465454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 21633131 - 21633188
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| || ||||||| |||||||||| |||||||||| |||| |||||||    
T  21633131 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaatt 21633188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 38283785 - 38283842
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||| |  ||| |||||||||||||||| |||| |||||||    
T  38283785 tatgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaatt 38283842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 4666809 - 4666869
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgata 186  Q
    ||||| ||||||||  |||| ||||||||||| ||||||||||| |||||||||| |||||    
T  4666809 gttttatacttttggtttgtttttataattgtttcatacactttattttggttgcatgata 4666869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 5191953 - 5192010
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  5191953 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 5192010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 10955982 - 10955925
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  10955982 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 10955925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 18099130 - 18099070
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||| ||||||  ||||||||||| |||| ||||||||||    
T  18099130 gttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgat 18099070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 33372628 - 33372596
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||||||||||    
T  33372628 aatgagggatcaaaagtggaggaatatgaaatt 33372596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 39715761 - 39715809
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||| |||||||||||||||||  |||||||||| ||||    
T  39715761 gttttctacttttggcttgtgtttataattgttccatacactttatttt 39715809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 41849355 - 41849412
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  41849355 gttttctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 41849412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 45003718 - 45003686
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||||||||||    
T  45003718 aatgagggatcaaaagtggaggaatatgaaatt 45003686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 880204 - 880145
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||  ||||| |||||| ||| ||||||||||||||||  |||||||||    
T  880204 gttttctacttttggtttgtgattataactgtttcatacactttgttttctttgcttgat 880145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 9604565 - 9604506
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||| ||||| | |||| |||||||||| |||||||||||| ||||||| ||||||    
T  9604565 gttttctatttttggcctgtgattataattgtttcatacactttggtttggttacttgat 9604506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 23633746 - 23633803
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||| || ||||||||||||| | || ||||||||||||||||||||||||||    
T  23633746 gttttctacttgtggcttgtgtttataaat-tc-catacactttgttttggttgcttgat 23633803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 43228588 - 43228646
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||| ||||| ||||| ||| |||||||  ||||||||||||||||||||||||||    
T  43228588 gttttctaattttggcttgtattt-taattgttccatacactttgttttggttgcttgat 43228646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 15328624 - 15328546
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||| ||||||| |  || ||||||   ||| |||| ||||||||||||    
T  15328624 tgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaatt 15328546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 16722155 - 16722077
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||| |||||||||||||||||| |||| || |  ||  ||||| |||||||||| |||| |||||||    
T  16722155 tgaaattacagtgacataatttatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaatt 16722077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 19112979 - 19113057
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||| |||| || |  || |||||| ||||||| || |||| |||||||    
T  19112979 tgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatt 19113057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 20853910 - 20853988
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||| ||||||||||||||| || |||| || |  || |||||| |||||||||| |||| |||||||    
T  20853910 tgaaattacagtgacataatttatgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaatt 20853988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 21633060 - 21632982
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||| |||| || |  || |||||| |||||||| | |||| |||||||    
T  21633060 tgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaatt 21632982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 25688120 - 25688066
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttg 179  Q
    |||||||||||||| |||||||||| ||||||  ||||||||||| |||||||||    
T  25688120 gttttctacttttggcttgtgtttacaattgttccatacactttgattttggttg 25688066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 26720850 - 26720906
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||||| | || ||||||||||||||||||||||||||    
T  26720850 ttttctacttttggcttgtatttataact-tc-catacactttgttttggttgcttgat 26720906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 30500255 - 30500333
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  || |||||||||| ||||| |||||||||| |  || |||||| ||||||||||  |||||||||||    
T  30500255 tgaaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaatt 30500333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 35995904 - 35995970
Alignment:
Q  55 gacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||||| |  ||  ||||| |||||||||| |||| |||||||    
T  35995904 gacgtaatttatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaatt 35995970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 45003660 - 45003582
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||| ||||||||| ||||||| |  || ||||||  ||||||||| |||| |||||||    
T  45003660 tgaaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaatt 45003582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 5800840 - 5800897
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| ||| |||||| ||||| |||| ||||| |||||||||| ||||||||||||    
T  5800840 tatgcaaattttgctgaagtggtggaataagggaccaaaagtggaagaatatgaaatt 5800897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 5886499 - 5886555
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttg 183  Q
    |||||||||||||| |||||| |||||| |||  ||||||||||| ||||||||||||    
T  5886499 gttttctacttttggcttgtgattataactgttccatacactttg-tttggttgcttg 5886555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 5899972 - 5900028
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttg 183  Q
    |||||||||||||| |||||| |||||| |||  ||||||||||| ||||||||||||    
T  5899972 gttttctacttttggcttgtgattataactgttccatacactttg-tttggttgcttg 5900028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 14162106 - 14162163
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| ||| |||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  14162106 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 14162163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 456210 - 456267
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||| ||||||||||||||||||||    
T  456210 gttttctacttttggcttgtatttataactttc--atacgctttgttttggttgcttgat 456267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 458587 - 458644
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||||| | ||  |||| ||||||||||||||||||||    
T  458587 gttttctacttttggcttgtatttataactttc--atacgctttgttttggttgcttgat 458644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 1321781 - 1321838
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||| ||||    
T  1321781 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcctgat 1321838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 10958278 - 10958221
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||   |||||||||||||||||||||||||    
T  10958278 gttttctacttttggcttgtattta--attgttctatacactttgttttggttgcttgat 10958221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 17465524 - 17465556
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  17465524 aatgagggaccaaaagtggaggaatatgaaatt 17465556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 47575428 - 47575460
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  47575428 aatgagggatcaaaagtggaggaatttgaaatt 47575460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 2e-20; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 33290213 - 33290135
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||| |||||||||||||||||||||||||||| ||| ||||| ||||||||||||| |||||||||    
T  33290213 tgaaattacagggacgaaatttatgcagattctgctgacgtggttaaataagggaccaaaagtggaggagtatgaaatt 33290135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 26236318 - 26236213
Alignment:
Q  16 aaatgagagaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatat 115  Q
    ||||||| |||||||||| ||||| ||||||||||||  ||||||||||||||| |||||||||||||| |  || |||||| |||||||| | |||| |    
T  26236318 aaatgagggaccaaaagtggaggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatct 26236219  T
Q  116 gaaatt 121  Q
    ||||||    
T  26236218 gaaatt 26236213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 45 - 121
Target Start/End: Original strand, 13284624 - 13284700
Alignment:
Q  45 aaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||  ||||||||||||| |||||||| |||||||||| ||||||||| ||||||||||||||| |||||||    
T  13284624 aaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaatt 13284700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 42923471 - 42923411
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  42923471 gttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgat 42923411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 7462909 - 7462850
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||    
T  7462909 gttttctacttttggcttgtgattataattgtttcatacactttgttttggttgcttgat 7462850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 19007931 - 19007990
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  19007931 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 19007990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 28196926 - 28196981
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgct 181  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  28196926 gttttctacttttggcttgtgtttataattgtttcatacactttgttttggttgct 28196981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 22407418 - 22407360
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||    
T  22407418 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttga 22407360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 20498917 - 20498832
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaat 120  Q
    ||||| |||||||||| |||||||||||||||||||||||| |||||||| |  || |||||| |||||||||| |||| ||||||    
T  20498917 gaggaatatgaaattatattgacgtaatttatgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaat 20498832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3022463 - 3022522
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||| |||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  3022463 gttttctgcttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 3022522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 22707715 - 22707656
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||| || |||||||||||||||||  ||||||||||||||||||||||||||    
T  22707715 gttttctacttctgccttgtgtttataattgttccatacactttgttttggttgcttgat 22707656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 28459156 - 28459097
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||  ||||||||||||||||  ||||||||||||||||||||||||||    
T  28459156 gttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttgat 28459097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 17849408 - 17849466
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||| |||||||||| ||||||  |||||||||||||||||||||||||    
T  17849408 gttttctacttttggcttgtgtttaaaattgttccatacactttgttttggttgcttga 17849466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 22263405 - 22263483
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||||||||||||||||||| |||||||||| |  || |||||| |||||||||| ||||||||||||    
T  22263405 tgaaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaatt 22263483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 23854880 - 23854958
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| |||||||||| |||||| |||||    
T  23854880 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaatt 23854958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 26560768 - 26560846
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || ||| || |||||||||| ||||||||||||    
T  26560768 tgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaatt 26560846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 15106302 - 15106359
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||||||||||| ||||||||||||||||||||| |||| |||||||    
T  15106302 tatgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaatt 15106359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 17850729 - 17850680
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  17850729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaat 17850680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 22263334 - 22263277
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  22263334 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaatt 22263277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 34979553 - 34979497
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgctt 182  Q
    |||||||||||||||||| |||||||||||||  |||||||||| ||||||||||||    
T  34979553 gttttctacttttgacttatgtttataattgttccatacactttattttggttgctt 34979497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 14837559 - 14837618
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||| |||||||| |||||||||||||||||   |||||||||||||||||||||||||    
T  14837559 gttttatacttttggcttgtgtttataattgttctatacactttgttttggttgcttgat 14837618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 38020371 - 38020430
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||  |||||| ||||||||||  ||||||||||||||||||||||||||    
T  38020371 gttttctacttttagcttgtgattataattgttccatacactttgttttggttgcttgat 38020430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 5375308 - 5375250
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||| |||||||||||||| |||||||||||  |||||||||||||||| |||||||||    
T  5375308 ttttttacttttgacttgtatttataattgttccatacactttgttttgattgcttgat 5375250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 22287300 - 22287242
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||| |||||||||| |||||||||||  |||||||| ||||||||||||||||    
T  22287300 gttttctacgtttgacttgtttttataattgttccatacactatgttttggttgcttga 22287242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 42670933 - 42671011
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||   ||||||||||||||||||||||||||||| |  || |||||| ||||||||||  |||||||||||    
T  42670933 tgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaatt 42671011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 17463326 - 17463383
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| || |||| ||||||||||||||||||||| ||||||| ||||    
T  17463326 tatgcagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaatt 17463383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 19251705 - 19251762
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  ||||||||| | |||||||| ||||||||||||    
T  19251705 tatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaatt 19251762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 23806187 - 23806244
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| ||| |||||||||||| |||||||||| |||||||||| ||||||||||||    
T  23806187 tatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 23806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 26560697 - 26560640
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  26560697 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 26560640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 30390602 - 30390545
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| |||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  30390602 tatgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 30390545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 175
Target Start/End: Complemental strand, 44289031 - 44288982
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttg 175  Q
    |||||||||| ||| ||||||||||||||||| |||||||||||||||||    
T  44289031 gttttctactgttggcttgtgtttataattgtttcatacactttgttttg 44288982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 6264112 - 6264052
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgata 186  Q
    |||||||||||| | |||||||| ||||||||  ||||||||||||||||||||| |||||    
T  6264112 gttttctactttcggcttgtgttaataattgttccatacactttgttttggttgcctgata 6264052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 15539493 - 15539433
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgata 186  Q
    |||||||||||||  |||||||||||||||||   ||||||||||||||| ||||||||||    
T  15539493 gttttctactttttgcttgtgtttataattgttcaatacactttgttttgattgcttgata 15539433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 6258781 - 6258722
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||  |||||||||||||||||  || |||||||||||||||||| ||||    
T  6258781 gttttctacttttagcttgtgtttataattgttccagacactttgttttggttgcctgat 6258722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 22162988 - 22162929
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| |||||| |||  |||||| |||||||||||||||||||    
T  22162988 gttttctacttttggcttgtgcttataactgttccatacaatttgttttggttgcttgat 22162929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 23871107 - 23871161
Alignment:
Q  126 gttttctacttttgacttgtgtttataattg--tctcatacactttgttttggtt 178  Q
    |||||||||||||| ||||||||||||||||  | ||||||||||||||||||||    
T  23871107 gttttctacttttgccttgtgtttataattgtttttcatacactttgttttggtt 23871161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 23806116 - 23806046
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||  |||||||||||||| ||||||||||||||| |  || |||||| |||||||||| ||||    
T  23806116 tgaaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaat 23806046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 35 - 121
Target Start/End: Complemental strand, 39878274 - 39878188
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||| ||||||||||||  ||||||||||||||||||| ||||||| || |  || ||| || |||||||||| |||| |||||||    
T  39878274 gaggaatatgaaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaatt 39878188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 26136052 - 26136109
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||| | ||| ||| ||||||||||||| ||||||||||||    
T  26136052 tatgcagattctgcttacgtgatggaacgagagatcaaaagtggaagaatatgaaatt 26136109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 26236330 - 26236387
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| ||||| |||| |||| |||||||    
T  26236330 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaatt 26236387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 174
Target Start/End: Complemental strand, 11739532 - 11739492
Alignment:
Q  134 cttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||| ||||||||||| ||||||||||||||||    
T  11739532 cttttgacttgtatttataattgtttcatacactttgtttt 11739492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 12418960 - 12419016
Alignment:
Q  66 tgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaattt 122  Q
    |||||||||||||||| ||||| |||||||||  ||||||||||||||  |||||||    
T  12418960 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaattt 12419016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 122
Target Start/End: Original strand, 12431020 - 12431076
Alignment:
Q  66 tgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaattt 122  Q
    |||||||||||||||| ||||| |||||||||  ||||||||||||||  |||||||    
T  12431020 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaattt 12431076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 13910002 - 13909945
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  13910002 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 13909945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 107
Target Start/End: Complemental strand, 17463255 - 17463191
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtgg 107  Q
    ||||||||||  |||||||||||||||||||||| |||| || |  ||||||||| |||||||||    
T  17463255 tgaaattacagggacgtaatttatgcagattctgttgacttgatgaaatgagggaccaaaagtgg 17463191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 21520654 - 21520594
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacacttt-gttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||  |||||||||| ||||    
T  21520654 gttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgat 21520594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 24162180 - 24162123
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  ||||| ||||||||||| |||||||||||||||    
T  24162180 gttttctacttttggcttgtattta--attgtttcatacacttttttttggttgcttgat 24162123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 45279958 - 45279901
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  45279958 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 45279901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 66 - 121
Target Start/End: Original strand, 30959909 - 30959964
Alignment:
Q  66 tgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| ||  |||| || ||||||| ||||||||||||||||||||||    
T  30959909 tgcagattctgctaacagggttaaacgagggattaaaagtggaggaatatgaaatt 30959964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 26135981 - 26135903
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||| |||| || |  || |||||| ||||||| || |||| |||||||    
T  26135981 tgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaatt 26135903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 38414146 - 38414092
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgc 180  Q
    |||||||||||||  ||||||||||||||| |  ||||||||||||||| |||||    
T  38414146 gttttctacttttaccttgtgtttataattattccatacactttgttttcgttgc 38414092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 121
Target Start/End: Complemental strand, 42670851 - 42670805
Alignment:
Q  75 tgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||| |||| ||||| |||||||||| ||||||||||||    
T  42670851 tgctgacgtggtggaataagggaccaaaagtggaagaatatgaaatt 42670805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 13284551 - 13284494
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| || ||||||  |||||||||  ||||||||| ||||||||||||    
T  13284551 tatgcagattctgttgtcgtggtgaaatgagggactaaaagtggaagaatatgaaatt 13284494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Complemental strand, 15106289 - 15106257
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  15106289 aatgagggatcaaaagtggaggaatctgaaatt 15106257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 17850742 - 17850774
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  17850742 aatgagggatcaaaagtggaggaatctgaaatt 17850774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 17897212 - 17897156
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||||||||||| ||||  ||  |||||||||||||||||||||    
T  17897212 gttttctacttttg-cttgtgtttataactgtc--atcaactttgttttggttgcttgat 17897156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 26560710 - 26560742
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||||| |||||||    
T  26560710 aatgagggatcaaaagtggaggaatttgaaatt 26560742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 27105095 - 27105152
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||  ||||  |||||  ||||||||||||||||||||||||||    
T  27105095 gttttctacttttggcttgcattta--attgttccatacactttgttttggttgcttgat 27105152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 14348 - 14289
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  14348 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 14289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 15367380 - 15367438
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||    
T  15367380 ttttctacttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 15367438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 32017691 - 32017796
Alignment:
Q  16 aaatgagagaccaaaagttgaggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatat 115  Q
    ||||||| |||||||||| ||||| | ||||||||||  || |||||||||||| |||| ||||||||| |  || |||||| |||||||||| ||||||    
T  32017691 aaatgagggaccaaaagtggaggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatat 32017790  T
Q  116 gaaatt 121  Q
    ||||||    
T  32017791 gaaatt 32017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 33637763 - 33637820
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  33637763 tatgcagattctgctgacgtggtggaatgagggatcaaaagtgaaagaatatgaaatt 33637820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 15346694 - 15346753
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  |||| |||||||||||||||||||||    
T  15346694 gttttctacttttggcttgtgtttataattgttccatatactttgttttggttgcttgat 15346753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 25480228 - 25480283
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgct 181  Q
    ||||||||||||||||||||| |||||||||| ||||||||||| |||||||||||    
T  25480228 gttttctacttttgacttgtgattataattgtttcatacactttattttggttgct 25480283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 3631903 - 3631849
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgc 180  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||||||||||    
T  3631903 gttttctacttttggcttgtgtttataattgttccatacactttgttttggttgc 3631849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 24338414 - 24338356
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    ||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||    
T  24338414 gttttctacttttggtttgtgtttataattgttccatacactttgttttggttgcttga 24338356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 30618126 - 30618048
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || |||||| ||||||||||  |||||||||||    
T  30618126 tgaaattacagggacgtaatttatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaatt 30618048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 30728788 - 30728730
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||    
T  30728788 gttttctacttttgacttgtatttataattgttccatacactttgttttggttgtttga 30728730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 18500457 - 18500400
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  18500457 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 18500400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 24732173 - 24732230
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  24732173 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 24732230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 33714630 - 33714573
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  33714630 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 33714573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 3394717 - 3394777
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    |||||||||||||| |||||||||||||||||  ||||||||||| |||||||||||||||    
T  3394717 gttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgat 3394777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 3629831 - 3629771
Alignment:
Q  126 gttttctactttt-gacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| | |||||||||||||||||  ||||||||||||||||||||||||||    
T  3629831 gttttctactttttggcttgtgtttataattgttccatacactttgttttggttgcttgat 3629771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 11982990 - 11982931
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| |||||| || |||||||  ||||||||||||||||||||||||||    
T  11982990 gttttctacttttggcttgtgattgtaattgttccatacactttgttttggttgcttgat 11982931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 1069682 - 1069624
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttga 184  Q
    |||||||||||||  |||||||||||||||||  |||||||||||||||| ||||||||    
T  1069682 gttttctactttttgcttgtgtttataattgttccatacactttgttttgattgcttga 1069624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 9481346 - 9481268
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||   ||||||||||||||||||||||||||||| |  || |||||| ||||| |||| ||||||||||||    
T  9481346 tgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaatt 9481268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 179
Target Start/End: Original strand, 9020279 - 9020332
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttg 179  Q
    |||||||||||||| ||||| |||||||||||  ||||||||||||||||||||    
T  9020279 gttttctacttttggcttgtatttataattgttccatacactttgttttggttg 9020332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 9854122 - 9854179
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||| ||||||||||||  ||||||||| |||||||||| ||||||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaatt 9854179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 14681025 - 14680968
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||  ||||| ||| |||||||||| ||||||||||||    
T  14681025 tatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaatt 14680968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 4816186 - 4816130
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||||||||| ||||  |||||  ||||||||||||||||||||||||||    
T  4816186 ttttctacttttgacttgtattta--attgttccatacactttgttttggttgcttgat 4816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 10321945 - 10322023
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  |||||||||||||||||||||||||||||| |  || || ||| |||||||| | |||| |||||||    
T  10321945 tgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaatt 10322023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 43 - 113
Target Start/End: Original strand, 14681096 - 14681166
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||  |||||||| | |||||||||| ||||||| ||| ||| ||||| |||||||||||||||    
T  14681096 tgaaattacagggacgtaatatgtgcagattctactgacgtagttaaataagggaccaaaagtggaggaat 14681166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 113
Target Start/End: Complemental strand, 33637751 - 33637653
Alignment:
Q  16 aaatgagagaccaaaagttg-aggattatgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||| |||||||||| | |||| | ||||||||||  |||||||| ||||||||||||||||||||  |  || |||||| |||||||||| ||||    
T  33637751 aaatgagggaccaaaagtgggaggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaat 33637653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 10321873 - 10321816
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||  ||||||||| |||||||| | ||||||||||||    
T  10321873 tatgcagatactgctgacgtggtgaaatgagggagcaaaagtgtaagaatatgaaatt 10321816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 121
Target Start/End: Complemental strand, 26385417 - 26385364
Alignment:
Q  68 cagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||| ||||||| |||||||||| |||||||||| |||||| |||||    
T  26385417 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatataaaatt 26385364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 121
Target Start/End: Complemental strand, 32017679 - 32017622
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||||||||||| |||| | ||| |||||||||| |||| |||||||    
T  32017679 tatgcagattctgctgacgtggtggaataaaggaccaaaagtggaagaatctgaaatt 32017622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 3233687 - 3233627
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||||||||  |||||||||||||||| |||| ||||||| |||||||||| ||||    
T  3233687 gttttctacttttggtttgtgtttataattgtttcatgcactttgattttggttgcctgat 3233627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 14507133 - 14507076
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  14507133 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 14507076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 20915312 - 20915256
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||  ||| | |||||||||||||||||||||||||||    
T  20915312 ttttctacttttggcttgtattta--attatttcatacactttgttttggttgcttgat 20915256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 2299535 - 2299601
Alignment:
Q  55 gacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||| |||| || |  || ||||||| ||||||||| |||| |||||||    
T  2299535 gacgtaatttatgcagattctgttgacttgatgaaaggagggataaaaagtggaagaatctgaaatt 2299601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 35 - 84
Target Start/End: Original strand, 3230069 - 3230118
Alignment:
Q  35 gaggattatgaaattacattgacgtaatttatgcagattctgctgacgtg 84  Q
    ||||| ||||||||||||  ||||| |||||||||||||||| |||||||    
T  3230069 gaggaatatgaaattacagggacgtgatttatgcagattctgttgacgtg 3230118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 9481417 - 9481474
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||| ||| |||||||||||| |||| ||||| |||||||||| |||| |||||||    
T  9481417 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaatt 9481474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 3230019 - 3230051
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  3230019 aatgagggaccaaaagtggaggaatatgaaatt 3230051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 28241278 - 28241221
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||||||||| |||||||||    
T  28241278 gttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgat 28241221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 76
Target Start/End: Original strand, 33714678 - 33714734
Alignment:
Q  21 agagaccaaaagtt-gaggattatgaaattacattgacgtaatttatgcagattctg 76  Q
    |||||||||||||  ||||| | ||||||||||  ||||||||||||||||||||||    
T  33714678 agagaccaaaagtgagaggaatctgaaattacaaggacgtaatttatgcagattctg 33714734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 4798 - 4855
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||    
T  4798 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaatt 4855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 85553 - 85613
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttgat 185  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| ||||||||| |||||    
T  85553 gttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgat 85613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 8557 - 8606
Alignment:
Q  64 tatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaat 113  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||    
T  8557 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaat 8606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 35919 - 35978
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgcttga 184  Q
    |||||| | ||||| ||||||||||||||||| |||||||||||| ||||||||||||||    
T  35919 gttttcgagttttggcttgtgtttataattgtttcatacactttgtttttggttgcttga 35978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 55 - 121
Target Start/End: Complemental strand, 1562 - 1496
Alignment:
Q  55 gacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||||| |||||||||||||||| |  || |||||| |||||||||| |||| |||||||    
T  1562 gacgtaatttatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaatt 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 1408 - 1351
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  1408 gttttctacttttggcttgtattta--attgttccatacactttgttttggttgcttgat 1351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 1408 - 1352
Alignment:
Q  127 ttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    ||||||||||||| ||||| ||||  |||||  ||||||||||||||||||||||||||    
T  1408 ttttctacttttggcttgtattta--attgttacatacactttgttttggttgcttgat 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 180
Target Start/End: Original strand, 79511 - 79566
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg-ttttggttgc 180  Q
    |||||||||||||| |||||| ||||||||||  ||||||||||| ||||||||||    
T  79511 gttttctacttttggcttgtgattataattgttccatacactttgattttggttgc 79566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 4083 - 4161
Alignment:
Q  43 tgaaattacattgacgtaatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||||  ||| |||||||||||||||||||||||||| |  || |||||| ||||| || | |||| |||||||    
T  4083 tgaaattacagagacataatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaatt 4161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 121
Target Start/End: Original strand, 4025 - 4057
Alignment:
Q  89 aatgagggatcaaaagtggaggaatatgaaatt 121  Q
    ||||||||| |||||||||||||||||||||||    
T  4025 aatgagggaccaaaagtggaggaatatgaaatt 4057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 121
Target Start/End: Original strand, 15862 - 15924
Alignment:
Q  59 taatttatgcagattctgctgacgtggttgaatgagggatcaaaagtggaggaatatgaaatt 121  Q
    |||||||||||||||||||||||||| |  || ||| || |||||||| | ||||||||||||    
T  15862 taatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtgaaagaatatgaaatt 15924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 11435 - 11387
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgtttt 174  Q
    |||||||||||||| |||||| ||||||||||  |||||||||| ||||    
T  11435 gttttctacttttggcttgtgattataattgttccatacactttatttt 11387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 185
Target Start/End: Complemental strand, 12827 - 12774
Alignment:
Q  130 tctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||| ||||| ||||||| | ||  |||||||||||||||||||||||||    
T  12827 tctacttttggcttgtatttataactttc--atacactttgttttggttgcttgat 12774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 41440 - 41383
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttgttttggttgcttgat 185  Q
    |||||||||||||| ||||| ||||  |||||  |||||||||||||||| |||||||||    
T  41440 gttttctacttttggcttgtattta--attgttccatacactttgttttgattgcttgat 41383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 80185 - 80229
Alignment:
Q  126 gttttctacttttgacttgtgtttataattgtctcatacactttg 170  Q
    |||||||||||||| ||||||||||||||| |  |||||||||||    
T  80185 gttttctacttttggcttgtgtttataatttttccatacactttg 80229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University