View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13382_high_24 (Length: 389)
Name: NF13382_high_24
Description: NF13382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13382_high_24 |
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Alignment Details
Target: chr8 (Bit Score: 335; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 16 - 370
Target Start/End: Original strand, 26181524 - 26181878
Alignment:
| Q |
16 |
atcatgcccaaagctataaaaattagcttgaacgctcattcttcttcttgtgtgtggtgtaaacttatcaaaactatatcttatagggggaggaaacgaa |
115 |
Q |
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| T |
26181524 |
atcatacccaaagctataaaagttagcttgaacgctcattcttcttcttgtgtgtggtgtaaacttatcaaaactatatcttatagggggaggaaacgaa |
26181623 |
T |
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| Q |
116 |
ttttccacagggggaatgacactatattgtctagtggaagggttccacagaacagggtaactatcccgaatagtgaaacagatgattccattgcaatcgc |
215 |
Q |
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| T |
26181624 |
ttttccacagggggaatgacactatattgtctagtggaagggttccacagaacagggtaactatcccgaatagtgaaacagatgattccattgcaatcgc |
26181723 |
T |
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| Q |
216 |
cggaacatctactgaaatcatctgtattcaaattatgaggtaaagggagtggggtctgtgattgtgatagtgtgttgaaaactgaagttatatgggtaca |
315 |
Q |
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| T |
26181724 |
cggaacatctactgaaatcatctgtattcaaattatgaggcaaagggagtggggtctgtgattgtgatagtgtgttgaaaactgaagttatatgggtaca |
26181823 |
T |
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| Q |
316 |
agtgaaaccgttgttttgaagcatgaggagatggtggtggttctgggaagccttt |
370 |
Q |
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| T |
26181824 |
agtgaaaccgttgttttgaagcatgaagagatggtggtggttctgagaagccttt |
26181878 |
T |
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