View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13382_high_50 (Length: 201)
Name: NF13382_high_50
Description: NF13382
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13382_high_50 |
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Alignment Details
Target: chr4 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 19 - 182
Target Start/End: Complemental strand, 1058032 - 1057872
Alignment:
| Q |
19 |
aaatccaaaaactattattataaagaagaaaataatcatatcatacatcattcattatcttctcaatggctgtttcttactcattcttgccactaagctt |
118 |
Q |
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| T |
1058032 |
aaatccaaaaactattat---aaagaagaaaataatcatatcatacatcattcattctcttctcaatggctgtttcttactcattcttggcactaagctt |
1057936 |
T |
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| Q |
119 |
cttctttttcctcttcacactctctccttttcctgtttctgctacagaccacattgtaggtgcc |
182 |
Q |
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|||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||| |
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| T |
1057935 |
cttctttttcctcttcacactctctcctttacctgtttccgctactgaccacattgtaggtgcc |
1057872 |
T |
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