View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13383_low_17 (Length: 308)
Name: NF13383_low_17
Description: NF13383
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13383_low_17 |
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Alignment Details
Target: chr2 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 11 - 295
Target Start/End: Complemental strand, 33717219 - 33716935
Alignment:
| Q |
11 |
catcatcaatttagatgcatctaccaaagacataactactactttaagctatattatatattaaattaaatatatctagctagaattttatgatgaagga |
110 |
Q |
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| T |
33717219 |
catcatcaatttagatgcatctaccaaagacataactactactttaagctatattatatattaaattaaatatatctagctagaattttatgatgaagga |
33717120 |
T |
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| Q |
111 |
aacaaaggttaattttgaaatagacacatgcatgcatgcataccttaagaattacgggacgttttccattgtgcaagatttcagatgtttcctccaatgt |
210 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33717119 |
aacaaaggttaattttgaaatagacacatgcatgcatacataccttaagaattacgggacgttttccattgtgcaagatttcagatgtttcctccaatgt |
33717020 |
T |
|
| Q |
211 |
ctctttgtaatttgtttgagattcaatatctcccatatcttgttccataaattcttaccttcaaattttagagagacccttttga |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
33717019 |
ctctttgtaatttgtttgagattcaatatctcccatatcttgttccataaactcttaccttcaaattttagagagacccttttga |
33716935 |
T |
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