View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13385_high_4 (Length: 235)

Name: NF13385_high_4
Description: NF13385
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13385_high_4
NF13385_high_4
[»] chr2 (35 HSPs)
chr2 (148-226)||(44902310-44902388)
chr2 (1-68)||(2379421-2379488)
chr2 (1-105)||(12243189-12243293)
chr2 (1-68)||(17977055-17977122)
chr2 (1-68)||(19389897-19389964)
chr2 (1-68)||(33964888-33964955)
chr2 (1-68)||(6036863-6036930)
chr2 (1-68)||(41568101-41568168)
chr2 (98-148)||(44901058-44901108)
chr2 (38-99)||(26479082-26479143)
chr2 (1-32)||(2379519-2379550)
chr2 (1-32)||(6036793-6036824)
chr2 (1-32)||(19390063-19390094)
chr2 (38-68)||(2358104-2358134)
chr2 (38-68)||(14286638-14286668)
chr2 (1-38)||(2357951-2357988)
chr2 (1-38)||(2371564-2371601)
chr2 (1-38)||(2371780-2371817)
chr2 (1-38)||(2379747-2379784)
chr2 (1-38)||(6036696-6036733)
chr2 (1-38)||(11123997-11124034)
chr2 (1-38)||(11979133-11979170)
chr2 (1-38)||(14287128-14287165)
chr2 (1-38)||(17977157-17977194)
chr2 (1-38)||(17977261-17977298)
chr2 (1-38)||(19390154-19390191)
chr2 (1-38)||(20115483-20115520)
chr2 (1-38)||(21866650-21866687)
chr2 (1-38)||(26479223-26479260)
chr2 (1-38)||(26479521-26479558)
chr2 (1-38)||(30786811-30786848)
chr2 (1-38)||(33965229-33965266)
chr2 (1-38)||(39429927-39429964)
chr2 (1-38)||(41568374-41568411)
chr2 (2-38)||(31546730-31546766)
[»] chr7 (45 HSPs)
chr7 (1-101)||(42077163-42077263)
chr7 (2-68)||(40430501-40430567)
chr7 (1-68)||(42697884-42697951)
chr7 (3-68)||(12725565-12725630)
chr7 (1-67)||(9869609-9869675)
chr7 (1-68)||(44062491-44062558)
chr7 (1-67)||(3888486-3888552)
chr7 (1-32)||(3888012-3888043)
chr7 (1-32)||(3888074-3888105)
chr7 (1-32)||(3888265-3888296)
chr7 (1-32)||(12725959-12725990)
chr7 (1-32)||(40430599-40430630)
chr7 (1-32)||(42697764-42697795)
chr7 (38-68)||(31587145-31587175)
chr7 (38-68)||(31622685-31622715)
chr7 (38-68)||(38742507-38742537)
chr7 (38-67)||(5543603-5543632)
chr7 (1-38)||(5543712-5543749)
chr7 (1-38)||(5543977-5544014)
chr7 (1-38)||(9870075-9870112)
chr7 (1-38)||(18676007-18676044)
chr7 (1-38)||(18676429-18676466)
chr7 (1-38)||(25105397-25105434)
chr7 (1-38)||(27902677-27902714)
chr7 (1-38)||(30888271-30888308)
chr7 (1-38)||(31587255-31587292)
chr7 (1-38)||(31587291-31587328)
chr7 (1-38)||(31622568-31622605)
chr7 (1-38)||(38742709-38742746)
chr7 (1-38)||(40186379-40186416)
chr7 (1-38)||(40430827-40430864)
chr7 (38-67)||(41118020-41118049)
chr7 (1-38)||(41118129-41118166)
chr7 (1-38)||(41118165-41118202)
chr7 (1-38)||(42076841-42076878)
chr7 (1-38)||(44062223-44062260)
chr7 (1-38)||(44509300-44509337)
chr7 (1-38)||(44509408-44509445)
chr7 (1-38)||(47019998-47020035)
chr7 (1-38)||(47020142-47020179)
chr7 (1-38)||(47455472-47455509)
chr7 (2-38)||(9869904-9869940)
chr7 (1-37)||(12725918-12725954)
chr7 (2-38)||(38742902-38742938)
chr7 (1-37)||(44291582-44291618)
[»] chr6 (36 HSPs)
chr6 (1-101)||(32937855-32937955)
chr6 (1-68)||(33130430-33130497)
chr6 (3-68)||(8933204-8933269)
chr6 (3-68)||(8944670-8944735)
chr6 (1-68)||(5546185-5546252)
chr6 (1-67)||(8707796-8707862)
chr6 (1-68)||(17595173-17595240)
chr6 (1-68)||(8669233-8669300)
chr6 (2-57)||(4170483-4170538)
chr6 (1-32)||(4170032-4170063)
chr6 (1-32)||(4170270-4170301)
chr6 (1-32)||(4170332-4170363)
chr6 (1-32)||(4210761-4210792)
chr6 (1-32)||(4210999-4211030)
chr6 (1-32)||(5545923-5545954)
chr6 (1-32)||(8660381-8660412)
chr6 (1-32)||(8933370-8933401)
chr6 (1-32)||(32938196-32938227)
chr6 (1-32)||(33130554-33130585)
chr6 (38-68)||(10791143-10791173)
chr6 (38-68)||(18676058-18676088)
chr6 (1-38)||(4170234-4170271)
chr6 (1-38)||(4210963-4211000)
chr6 (1-38)||(8063211-8063248)
chr6 (1-38)||(8933429-8933466)
chr6 (1-38)||(10791027-10791064)
chr6 (1-38)||(17595470-17595507)
chr6 (1-38)||(28470164-28470201)
chr6 (1-38)||(29517206-29517243)
chr6 (1-38)||(29863601-29863638)
chr6 (3-32)||(32938021-32938050)
chr6 (1-38)||(33130721-33130758)
chr6 (1-38)||(34475830-34475867)
chr6 (1-37)||(8063476-8063512)
chr6 (2-38)||(33490287-33490323)
chr6 (1-37)||(34476312-34476348)
[»] chr5 (46 HSPs)
chr5 (1-68)||(36483796-36483863)
chr5 (1-68)||(1421561-1421628)
chr5 (1-68)||(42222293-42222360)
chr5 (1-68)||(3390216-3390283)
chr5 (1-68)||(28349716-28349783)
chr5 (1-68)||(35065180-35065247)
chr5 (1-68)||(27770669-27770736)
chr5 (1-55)||(23191303-23191357)
chr5 (1-32)||(1421499-1421530)
chr5 (1-32)||(3390392-3390423)
chr5 (1-36)||(6230930-6230965)
chr5 (1-32)||(35065496-35065527)
chr5 (1-32)||(35065734-35065765)
chr5 (1-32)||(36483920-36483951)
chr5 (1-32)||(42222075-42222106)
chr5 (1-32)||(42222235-42222266)
chr5 (38-68)||(6231011-6231041)
chr5 (1-38)||(6230894-6230931)
chr5 (1-38)||(8335743-8335780)
chr5 (1-38)||(8336043-8336080)
chr5 (1-38)||(8782441-8782478)
chr5 (1-38)||(8835971-8836008)
chr5 (1-38)||(8836200-8836237)
chr5 (1-38)||(10691588-10691625)
chr5 (1-38)||(15472339-15472376)
chr5 (1-38)||(18186171-18186208)
chr5 (1-38)||(18617830-18617867)
chr5 (1-38)||(18618012-18618049)
chr5 (1-38)||(23191551-23191588)
chr5 (1-38)||(25031846-25031883)
chr5 (1-38)||(25031954-25031991)
chr5 (1-38)||(27770930-27770967)
chr5 (1-38)||(28349453-28349490)
chr5 (1-38)||(28349489-28349526)
chr5 (1-38)||(29296613-29296650)
chr5 (1-38)||(29296829-29296866)
chr5 (1-38)||(33569800-33569837)
chr5 (1-38)||(35065526-35065563)
chr5 (1-38)||(35065826-35065863)
chr5 (1-38)||(36484148-36484185)
chr5 (1-38)||(41743029-41743066)
chr5 (2-38)||(3390422-3390458)
chr5 (2-38)||(15472096-15472132)
chr5 (36-68)||(18618163-18618195)
chr5 (2-38)||(23191432-23191468)
chr5 (2-38)||(33591411-33591447)
[»] chr3 (71 HSPs)
chr3 (1-68)||(17332761-17332828)
chr3 (1-68)||(22498140-22498207)
chr3 (1-68)||(26717170-26717237)
chr3 (1-68)||(43219620-43219687)
chr3 (3-68)||(49804059-49804124)
chr3 (1-68)||(26230124-26230191)
chr3 (1-99)||(31655711-31655809)
chr3 (2-68)||(9746531-9746597)
chr3 (3-68)||(48478443-48478508)
chr3 (1-68)||(12227187-12227254)
chr3 (1-67)||(41113454-41113520)
chr3 (1-68)||(53019724-53019789)
chr3 (1-68)||(13287853-13287920)
chr3 (1-68)||(10048464-10048532)
chr3 (1-68)||(28554577-28554644)
chr3 (1-32)||(9746309-9746340)
chr3 (1-32)||(9746422-9746453)
chr3 (1-32)||(10048707-10048738)
chr3 (1-32)||(12227507-12227538)
chr3 (1-32)||(12227543-12227574)
chr3 (1-32)||(13287307-13287338)
chr3 (1-32)||(22498052-22498083)
chr3 (1-32)||(26229883-26229914)
chr3 (1-32)||(26717268-26717299)
chr3 (1-36)||(33583985-33584020)
chr3 (1-32)||(41113633-41113664)
chr3 (1-32)||(43219532-43219563)
chr3 (1-36)||(44378417-44378452)
chr3 (38-68)||(1545358-1545388)
chr3 (38-68)||(8067878-8067908)
chr3 (1-31)||(22497990-22498020)
chr3 (38-68)||(23151593-23151623)
chr3 (38-68)||(33584066-33584096)
chr3 (38-68)||(51166545-51166575)
chr3 (1-38)||(502177-502214)
chr3 (1-38)||(1545468-1545505)
chr3 (1-38)||(5272973-5273010)
chr3 (1-38)||(5273251-5273288)
chr3 (1-38)||(8068194-8068231)
chr3 (1-38)||(10048531-10048568)
chr3 (1-38)||(10660209-10660246)
chr3 (1-38)||(13287271-13287308)
chr3 (3-32)||(13287365-13287394)
chr3 (1-38)||(23151476-23151513)
chr3 (1-38)||(24349845-24349882)
chr3 (1-38)||(24406416-24406453)
chr3 (1-38)||(27449912-27449949)
chr3 (1-38)||(28554841-28554878)
chr3 (1-38)||(31655486-31655523)
chr3 (1-38)||(33583949-33583986)
chr3 (1-38)||(37126046-37126083)
chr3 (1-38)||(37126311-37126348)
chr3 (1-38)||(38252940-38252977)
chr3 (1-38)||(38253168-38253205)
chr3 (3-32)||(41113597-41113626)
chr3 (1-38)||(41113769-41113806)
chr3 (1-38)||(43219298-43219335)
chr3 (1-38)||(48478214-48478251)
chr3 (1-38)||(49804244-49804281)
chr3 (1-38)||(49804280-49804317)
chr3 (1-38)||(49804483-49804520)
chr3 (1-38)||(51166655-51166692)
chr3 (1-38)||(51166848-51166885)
chr3 (1-38)||(51754844-51754881)
chr3 (1-38)||(51755001-51755038)
chr3 (1-38)||(53019487-53019524)
chr3 (1-37)||(1545855-1545891)
chr3 (1-37)||(2446552-2446588)
chr3 (1-37)||(5272938-5272974)
chr3 (2-38)||(8828247-8828283)
chr3 (1-37)||(27450020-27450056)
[»] scaffold0189 (6 HSPs)
scaffold0189 (1-68)||(26548-26615)
scaffold0189 (1-38)||(27095-27132)
scaffold0189 (1-38)||(27368-27405)
scaffold0189 (1-32)||(26672-26703)
scaffold0189 (1-32)||(26792-26823)
scaffold0189 (1-38)||(26822-26859)
[»] chr4 (79 HSPs)
chr4 (1-100)||(49331282-49331381)
chr4 (1-67)||(35948658-35948724)
chr4 (3-104)||(22169831-22169932)
chr4 (1-68)||(20492845-20492912)
chr4 (1-68)||(36308239-36308306)
chr4 (1-68)||(54203163-54203230)
chr4 (1-68)||(56163146-56163213)
chr4 (1-68)||(17445154-17445221)
chr4 (1-68)||(29932766-29932833)
chr4 (1-68)||(33960941-33961008)
chr4 (1-64)||(55542263-55542326)
chr4 (1-67)||(11004920-11004986)
chr4 (1-101)||(43957254-43957354)
chr4 (1-67)||(27766923-27766990)
chr4 (1-64)||(26488797-26488860)
chr4 (1-67)||(2492535-2492601)
chr4 (1-38)||(11005160-11005197)
chr4 (1-38)||(22169725-22169762)
chr4 (1-32)||(2492360-2492391)
chr4 (1-32)||(11005130-11005161)
chr4 (1-32)||(22169654-22169685)
chr4 (1-32)||(24744476-24744507)
chr4 (1-32)||(27767089-27767120)
chr4 (1-32)||(29932961-29932992)
chr4 (1-32)||(33961346-33961377)
chr4 (1-32)||(33961516-33961547)
chr4 (1-32)||(35948930-35948961)
chr4 (1-32)||(36308487-36308518)
chr4 (1-32)||(43957385-43957416)
chr4 (1-32)||(49331412-49331443)
chr4 (1-32)||(54202926-54202957)
chr4 (1-32)||(54203101-54203132)
chr4 (1-32)||(56163016-56163047)
chr4 (2-32)||(22169690-22169720)
chr4 (38-68)||(41763478-41763508)
chr4 (1-38)||(3874199-3874236)
chr4 (1-38)||(3931498-3931535)
chr4 (1-38)||(3931617-3931654)
chr4 (1-38)||(7327200-7327237)
chr4 (1-38)||(7553775-7553812)
chr4 (1-38)||(11005196-11005233)
chr4 (1-38)||(11309126-11309163)
chr4 (1-38)||(11381622-11381659)
chr4 (1-38)||(22169512-22169549)
chr4 (1-38)||(24744506-24744543)
chr4 (1-38)||(27767180-27767217)
chr4 (1-38)||(28573205-28573242)
chr4 (1-38)||(28573470-28573507)
chr4 (1-38)||(28867343-28867380)
chr4 (1-38)||(29924023-29924060)
chr4 (1-38)||(29933052-29933089)
chr4 (3-32)||(33961127-33961156)
chr4 (1-38)||(33961206-33961243)
chr4 (1-38)||(33961376-33961413)
chr4 (1-38)||(35949021-35949058)
chr4 (1-38)||(36224616-36224653)
chr4 (1-38)||(36224762-36224799)
chr4 (1-38)||(36308305-36308342)
chr4 (1-38)||(36308517-36308554)
chr4 (1-38)||(36308553-36308590)
chr4 (1-38)||(36431826-36431863)
chr4 (1-38)||(36431862-36431899)
chr4 (1-38)||(36432116-36432153)
chr4 (1-38)||(39677330-39677367)
chr4 (1-38)||(45884980-45885017)
chr4 (1-38)||(45885245-45885282)
chr4 (1-38)||(48868614-48868651)
chr4 (1-38)||(48873999-48874036)
chr4 (1-38)||(49331640-49331677)
chr4 (1-38)||(50622085-50622122)
chr4 (1-38)||(50622301-50622338)
chr4 (38-67)||(50622418-50622447)
chr4 (1-38)||(54202793-54202830)
chr4 (1-38)||(54202829-54202866)
chr4 (1-38)||(55281765-55281802)
chr4 (1-38)||(55282102-55282139)
chr4 (1-38)||(56162980-56163017)
chr4 (1-29)||(22169476-22169504)
chr4 (40-68)||(33115443-33115471)
[»] chr1 (61 HSPs)
chr1 (1-68)||(3416895-3416962)
chr1 (1-68)||(13556681-13556748)
chr1 (1-99)||(25829452-25829550)
chr1 (1-68)||(26769617-26769684)
chr1 (1-68)||(39465205-39465272)
chr1 (1-64)||(40360399-40360462)
chr1 (1-68)||(24179761-24179828)
chr1 (1-68)||(30361944-30362011)
chr1 (1-100)||(31760086-31760185)
chr1 (1-68)||(44233442-44233509)
chr1 (1-68)||(45501787-45501854)
chr1 (1-68)||(4489538-4489605)
chr1 (1-68)||(17580523-17580590)
chr1 (1-68)||(25729576-25729643)
chr1 (1-68)||(35720301-35720368)
chr1 (1-68)||(47534672-47534739)
chr1 (1-68)||(46675538-46675601)
chr1 (1-32)||(3416662-3416693)
chr1 (1-32)||(3416833-3416864)
chr1 (1-32)||(24180016-24180047)
chr1 (1-32)||(25829277-25829308)
chr1 (1-32)||(35720088-35720119)
chr1 (1-32)||(40360269-40360300)
chr1 (1-32)||(45502107-45502138)
chr1 (1-32)||(46675476-46675507)
chr1 (1-32)||(47534542-47534573)
chr1 (38-68)||(50501449-50501479)
chr1 (1-38)||(3047183-3047220)
chr1 (1-38)||(3047452-3047489)
chr1 (1-38)||(3771118-3771155)
chr1 (1-38)||(3771154-3771191)
chr1 (1-38)||(4489799-4489836)
chr1 (1-38)||(6979323-6979360)
chr1 (1-38)||(8896154-8896191)
chr1 (1-38)||(11335394-11335431)
chr1 (1-38)||(11493414-11493451)
chr1 (1-38)||(15475419-15475456)
chr1 (1-38)||(15475648-15475685)
chr1 (1-38)||(17925912-17925949)
chr1 (1-38)||(24180107-24180144)
chr1 (1-38)||(25729642-25729679)
chr1 (1-38)||(25729714-25729751)
chr1 (1-38)||(25829180-25829217)
chr1 (1-38)||(26769921-26769958)
chr1 (1-38)||(28068389-28068426)
chr1 (1-38)||(28226011-28226048)
chr1 (1-38)||(29033334-29033371)
chr1 (1-38)||(30361576-30361613)
chr1 (1-38)||(31760379-31760416)
chr1 (1-38)||(37093502-37093539)
chr1 (1-38)||(37093611-37093648)
chr1 (1-38)||(37093840-37093877)
chr1 (1-38)||(40360172-40360209)
chr1 (1-38)||(44054485-44054522)
chr1 (1-38)||(44233694-44233731)
chr1 (1-38)||(45502137-45502174)
chr1 (1-38)||(46233779-46233816)
chr1 (1-38)||(46234020-46234057)
chr1 (1-38)||(47534506-47534543)
chr1 (1-37)||(39464938-39464974)
chr1 (1-37)||(49457263-49457299)
[»] chr8 (43 HSPs)
chr8 (1-67)||(45085030-45085096)
chr8 (1-68)||(8353172-8353239)
chr8 (1-68)||(20819589-20819656)
chr8 (1-68)||(32138250-32138317)
chr8 (1-68)||(33411879-33411946)
chr8 (1-68)||(38098083-38098150)
chr8 (1-67)||(27720141-27720207)
chr8 (3-68)||(11021093-11021158)
chr8 (1-64)||(26415709-26415772)
chr8 (1-38)||(45084994-45085031)
chr8 (1-32)||(8352865-8352896)
chr8 (1-32)||(11020769-11020800)
chr8 (1-32)||(33411387-33411418)
chr8 (1-32)||(33411449-33411480)
chr8 (1-32)||(38098249-38098280)
chr8 (1-32)||(45084819-45084850)
chr8 (38-68)||(35392860-35392890)
chr8 (2-32)||(39780832-39780862)
chr8 (1-38)||(482715-482752)
chr8 (1-38)||(482823-482860)
chr8 (1-38)||(8352767-8352804)
chr8 (1-38)||(12987081-12987118)
chr8 (1-38)||(20187893-20187930)
chr8 (1-38)||(20819370-20819407)
chr8 (1-38)||(26415965-26416002)
chr8 (1-38)||(27719535-27719572)
chr8 (1-38)||(27719607-27719644)
chr8 (1-38)||(27719910-27719947)
chr8 (1-38)||(29998140-29998177)
chr8 (1-38)||(29998297-29998334)
chr8 (1-38)||(30699680-30699717)
chr8 (1-38)||(32138007-32138044)
chr8 (1-38)||(32834798-32834835)
chr8 (1-38)||(35393186-35393223)
chr8 (1-38)||(38098340-38098377)
chr8 (1-38)||(38098376-38098413)
chr8 (3-32)||(39780656-39780685)
chr8 (1-38)||(45084722-45084759)
chr8 (2-38)||(11020806-11020842)
chr8 (1-37)||(11021055-11021091)
chr8 (1-37)||(20188001-20188037)
chr8 (1-37)||(20207070-20207106)
chr8 (2-38)||(33411352-33411388)
[»] scaffold0081 (1 HSPs)
scaffold0081 (38-68)||(12228-12258)
[»] scaffold0562 (1 HSPs)
scaffold0562 (1-38)||(5018-5055)
[»] scaffold0041 (4 HSPs)
scaffold0041 (38-67)||(104906-104935)
scaffold0041 (1-38)||(105015-105052)
scaffold0041 (1-38)||(105195-105232)
scaffold0041 (1-38)||(105374-105411)


Alignment Details
Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 148 - 226
Target Start/End: Original strand, 44902310 - 44902388
Alignment:
Q  148 taccataaatagttgaagagatttaattagctcataaaaacaaatagaataatactatatttgtttctaatatattctt 226  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44902310 taccttaaatagttgaagagatttaattagctcataaaaacaaatagaataatactatatttgtttctaatatattctt 44902388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 2379488 - 2379421
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2379488 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 2379421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 12243189 - 12243293
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctta 100  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||        ||||||||| ||||||| |||||     
T  12243189 ggttaatgtaaattaagtttacttatgttcaacttaagggtatattagtcattctggggtgtaacttgttttttttggggtgtgactagcaccagtcttt 12243288  T
Q  101 ttata 105  Q
    |||||    
T  12243289 ttata 12243293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17977122 - 17977055
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17977122 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 17977055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 19389964 - 19389897
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19389964 ggttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctagggtgtaacttg 19389897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33964955 - 33964888
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33964955 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 33964888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 6036863 - 6036930
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  6036863 ggttaatgtaaattaaatttacttatgttcaatttaggggtatattagtcattctagggtgtaacttg 6036930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 41568168 - 41568101
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  41568168 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctaaggtgtaacttg 41568101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 44901058 - 44901108
Alignment:
Q  98 ttattatatttgtaaatattttcaattatagataccctatttaaccaatat 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44901058 ttattatatttgtaaatattttcaattatagataccctatttaaccaatat 44901108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 26479143 - 26479082
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctt 99  Q
    |||||||||||||||||||||||||||||||        ||||||||| |||||||||||||    
T  26479143 gggtatattagtcattctggggtgtaacttgttttttttggggtgtgactagcaccggtctt 26479082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 2379550 - 2379519
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  2379550 ggttaatgtaaatttagtttacttatgttcaa 2379519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 6036793 - 6036824
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  6036793 ggttaatgtaaatttagtttacttatgttcaa 6036824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 19390094 - 19390063
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  19390094 ggttaatgtaaatttagtttacttatgttcaa 19390063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 2358104 - 2358134
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  2358104 gggtatattagtcattctggggtgtaacttg 2358134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 14286668 - 14286638
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  14286668 gggtatattagtcattctggggtgtaacttg 14286638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 2357951 - 2357988
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  2357951 ggttaatgtaaattaagtttacttatgttcaatttagg 2357988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2371601 - 2371564
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  2371601 ggttaatgtaaattaagtttacttatgttcaatttagg 2371564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2371817 - 2371780
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  2371817 ggttaatgtaaattaagtttacttatgttcaatttagg 2371780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 2379784 - 2379747
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  2379784 ggttaatgtaaattcagtttacttatgttcaatttagg 2379747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6036696 - 6036733
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  6036696 ggttaatgtaaattcagtttacttatgttcaatttagg 6036733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11124034 - 11123997
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11124034 ggttaatgtaaattaagtttacttatgttcaatttagg 11123997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11979133 - 11979170
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11979133 ggttaatgtaaattaagtttacttatgttcaatttagg 11979170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14287165 - 14287128
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  14287165 ggttaatgtaaattaagtttacttatgttcaatttagg 14287128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17977194 - 17977157
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  17977194 ggttaatgtaaattaagtttacttatgttcaatttagg 17977157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17977298 - 17977261
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  17977298 ggttaatgtaaattaagtttacttatgttcaatttagg 17977261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 19390191 - 19390154
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  19390191 ggttaatgtaaattcagtttacttatgttcaatttagg 19390154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20115483 - 20115520
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  20115483 ggttaatgtaaattgagtttacttatgttcaatttagg 20115520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 21866687 - 21866650
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  21866687 ggttaatgtaaattaagtttacttatgttcaatttagg 21866650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26479260 - 26479223
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26479260 ggttaatgtaaattaagtttacttatgttcaatttagg 26479223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26479558 - 26479521
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26479558 ggttaatgtaaattaagtttacttatgttcaatttagg 26479521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30786848 - 30786811
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  30786848 ggttaatgtaaattaagtttacttatgttcaatttagg 30786811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33965266 - 33965229
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33965266 ggttaatgtaaattaagtttacttatgttcaatttagg 33965229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39429964 - 39429927
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  39429964 ggttaatgtaaattaagtttacttatgttcaatttagg 39429927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41568411 - 41568374
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  41568411 ggttaatgtaaattaagtttacttatgttcaatttagg 41568374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 31546766 - 31546730
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  31546766 gttaatgtaaattaagtttacttatgttcaatttagg 31546730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 4e-31; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 42077163 - 42077263
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctta 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||| ||||||| ||||||    
T  42077163 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgttttttttggggtgtgactagcaccagtctta 42077262  T
Q  101 t 101  Q
    |    
T  42077263 t 42077263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 2 - 68
Target Start/End: Complemental strand, 40430567 - 40430501
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40430567 gttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 40430501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42697884 - 42697951
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42697884 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattatggggtgtaacttg 42697951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 12725630 - 12725565
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12725630 ttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 12725565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9869675 - 9869609
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  9869675 ggttaatgtaaattaagtttacttatgttcaatttaagggtatattagtcattctggggtgtaactt 9869609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 44062491 - 44062558
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||| ||||| ||||| |||||||||||||||||||||||||||||    
T  44062491 ggttaatgtaaattaagtttacttatattcaatttaggagtatattagtcattctggggtgtaacttg 44062558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 3888486 - 3888552
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||| ||||| ||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  3888486 ggttaatggaaattaagtttacttatgttcaatttagggatatattagtcattctggggtggaactt 3888552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3888012 - 3888043
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  3888012 ggttaatgtaaatttagtttacttatgttcaa 3888043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3888074 - 3888105
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  3888074 ggttaatgtaaatttagtttacttatgttcaa 3888105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3888265 - 3888296
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  3888265 ggttaatgtaaatttagtttacttatgttcaa 3888296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12725990 - 12725959
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  12725990 ggttaatgtaaatttagtttacttatgttcaa 12725959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 40430630 - 40430599
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  40430630 ggttaatgtaaatttagtttacttatgttcaa 40430599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 42697764 - 42697795
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  42697764 ggttaatgtaaatttagtttacttatgttcaa 42697795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 31587175 - 31587145
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  31587175 gggtatattagtcattctggggtgtaacttg 31587145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 31622685 - 31622715
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  31622685 gggtatattagtcattctggggtgtaacttg 31622715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 38742537 - 38742507
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  38742537 gggtatattagtcattctggggtgtaacttg 38742507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 5543632 - 5543603
Alignment:
Q  38 gggtatattagtcattctggggtgtaactt 67  Q
    ||||||||||||||||||||||||||||||    
T  5543632 gggtatattagtcattctggggtgtaactt 5543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5543749 - 5543712
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  5543749 ggttaatgtaaattaagtttacttatgttcaatttagg 5543712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5544014 - 5543977
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  5544014 ggttaatgtaaattaagtttacttatgttcaatttagg 5543977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 9870112 - 9870075
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  9870112 ggttaatgtaaattaagtttacttatgttcaatttagg 9870075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18676044 - 18676007
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18676044 ggttaatgtaaattaagtttacttatgttcaatttagg 18676007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 18676466 - 18676429
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18676466 ggttaatgtaaattaagtttacttatgttcaatttagg 18676429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25105397 - 25105434
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  25105397 ggttaatgtaaattaagtttacttatgttcaatttagg 25105434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27902677 - 27902714
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27902677 ggttaatgtaaattaagtttacttatgttcaagttagg 27902714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30888308 - 30888271
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  30888308 ggttaatgtaaattaagtttacttatgttcaatttagg 30888271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31587292 - 31587255
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  31587292 ggttaatgtaaattaagtttacttatgttcaatttagg 31587255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31587328 - 31587291
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  31587328 ggttaatgtaaattaagtttacttatgttcaatttagg 31587291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31622568 - 31622605
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  31622568 ggttaatgtaaattaagtttacttatgttcaatttagg 31622605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38742746 - 38742709
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  38742746 ggttaatgtaaattaagtttacttatgttcaatttagg 38742709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40186416 - 40186379
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  40186416 ggttaatgtaaattaagtttacttatgttcaatttagg 40186379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 40430864 - 40430827
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  40430864 ggttaatgtaaattcagtttacttatgttcaatttagg 40430827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 41118049 - 41118020
Alignment:
Q  38 gggtatattagtcattctggggtgtaactt 67  Q
    ||||||||||||||||||||||||||||||    
T  41118049 gggtatattagtcattctggggtgtaactt 41118020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41118166 - 41118129
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  41118166 ggttaatgtaaattaagtttacttatgttcaatttagg 41118129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41118202 - 41118165
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  41118202 ggttaatgtaaattcagtttacttatgttcaatttagg 41118165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42076841 - 42076878
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  42076841 ggttaatgtaaattcagtttacttatgttcaatttagg 42076878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44062223 - 44062260
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  44062223 ggttaatgtaaattaagtttacttatgttcaatttagg 44062260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44509300 - 44509337
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  44509300 ggttaatgtaaattaagtttacttatgttcaatttagg 44509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 44509408 - 44509445
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  44509408 ggttaatgtaaattcagtttacttatgttcaatttagg 44509445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47020035 - 47019998
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  47020035 ggttaatgtaaattaagtttacttatgttcaatttagg 47019998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 47020179 - 47020142
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  47020179 ggttaatgtaaattaagtttacttatgttcaatttagg 47020142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47455472 - 47455509
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  47455472 ggttaatgtaaattaagtttacttatgttcaatttagg 47455509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 9869940 - 9869904
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  9869940 gttaatgtaaattaagtttacttatgttcaatttagg 9869904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 12725954 - 12725918
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  12725954 ggttaatgtaaatttagtttacttacgttcaatttag 12725918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 38742938 - 38742902
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  38742938 gttaatgtaaattaagtttacttatgttcaatttagg 38742902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 44291582 - 44291618
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  44291582 ggttaatgtaaattcagtttacttatgttcaatttag 44291618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 32937955 - 32937855
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctta 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||| ||||||    
T  32937955 ggttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgtttttgttggggtgtgattagcaccagtctta 32937856  T
Q  101 t 101  Q
    |    
T  32937855 t 32937855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33130497 - 33130430
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33130497 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 33130430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 8933269 - 8933204
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8933269 ttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 8933204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 8944735 - 8944670
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8944735 ttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 8944670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 5546185 - 5546252
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  5546185 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattaatcattctggagtgtaacttg 5546252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 8707796 - 8707862
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  8707796 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaactt 8707862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17595240 - 17595173
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  17595240 ggttaatgtaaattaaatttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 17595173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8669233 - 8669300
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| |||||||||    
T  8669233 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattaatcattctgggatgtaacttg 8669300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 57
Target Start/End: Original strand, 4170483 - 4170538
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctgg 57  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4170483 gttaatgtaaattcagtttacttatgttcaatttaggggtatattagtcattctgg 4170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4170032 - 4170063
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  4170032 ggttaatgtaaatttagtttacttatgttcaa 4170063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4170270 - 4170301
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  4170270 ggttaatgtaaatttagtttacttatgttcaa 4170301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4170332 - 4170363
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  4170332 ggttaatgtaaatttagtttacttatgttcaa 4170363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4210761 - 4210792
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  4210761 ggttaatgtaaatttagtttacttatgttcaa 4210792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 4210999 - 4211030
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  4210999 ggttaatgtaaatttagtttacttatgttcaa 4211030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 5545923 - 5545954
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  5545923 ggttaatgtaaatttagtttacttatgttcaa 5545954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8660381 - 8660412
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  8660381 ggttaatgtaaatttagtttacttatgttcaa 8660412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 8933401 - 8933370
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  8933401 ggttaatgtaaatttagtttacttatgttcaa 8933370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 32938227 - 32938196
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  32938227 ggttaatgtaaatttagtttacttatgttcaa 32938196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33130585 - 33130554
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  33130585 ggttaatgtaaatttagtttacttatgttcaa 33130554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 10791143 - 10791173
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  10791143 gggtatattagtcattctggggtgtaacttg 10791173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 18676088 - 18676058
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  18676088 gggtatattagtcattctggggtgtaacttg 18676058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4170234 - 4170271
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  4170234 ggttaatgtaaattaagtttacttatgttcaatttagg 4170271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 4210963 - 4211000
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  4210963 ggttaatgtaaattaagtttacttatgttcaatttagg 4211000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8063211 - 8063248
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8063211 ggttaatgtaaattaagtttacttatgttcaatttagg 8063248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8933466 - 8933429
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8933466 ggttaatgtaaattaagtttacttatgttcaatttagg 8933429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10791027 - 10791064
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  10791027 ggttaatgtaaattaagtttacttatgttcaatttagg 10791064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17595507 - 17595470
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  17595507 ggttaatgtaaattaagtttacttatgttcaatttagg 17595470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28470164 - 28470201
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28470164 ggttaatgtaaattaagtttacttatgttcaatttagg 28470201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29517206 - 29517243
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29517206 ggttaatgtaaattaagtttacttatgttcaatttagg 29517243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29863638 - 29863601
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29863638 ggttaatgtaaattaagtttacttatgttcaatttagg 29863601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 32938050 - 32938021
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||    
T  32938050 ttaatgtaaatttagtttacttatgttcaa 32938021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33130758 - 33130721
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33130758 ggttaatgtaaattcagtttacttatgttcaatttagg 33130721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 34475830 - 34475867
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  34475830 ggttaatgtaaattaagtttacttatgttcaatttagg 34475867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 8063476 - 8063512
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  8063476 ggttaatgtaaattaagtttacttatgttcaatttag 8063512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 33490287 - 33490323
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  33490287 gttaatgtaaattaagtttacttatgttcaatttagg 33490323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 34476312 - 34476348
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  34476312 ggttaatgtaaattaagtttacttatgttcaatttag 34476348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36483863 - 36483796
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36483863 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 36483796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1421561 - 1421628
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1421561 ggttaatgtaaatttagtttacttatgtttaacttagaggtatattagtcattctggggtgtaacttg 1421628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 42222293 - 42222360
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  42222293 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctaaggtgtaacttg 42222360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3390283 - 3390216
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  3390283 ggttagtgtaaattcagtttacttatgttcaattcaggggtatattagtcattctggggtgtaacttg 3390216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28349716 - 28349783
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||  ||||||||||    
T  28349716 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctgaagtgtaacttg 28349783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 35065247 - 35065180
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||||    
T  35065247 ggttaatgtaaattaagtttacttatgttcaattcaagggtatattagtcattctggggtgtaacttg 35065180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 27770736 - 27770669
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||| ||| ||||||||| ||||||||||||||    
T  27770736 ggttaatgtaaattaagtttacttatgttcaatttagggatatgttagtcattttggggtgtaacttg 27770669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 23191357 - 23191303
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattct 55  Q
    |||||||| ||||| ||||||||||||||||| ||| ||||||||||| ||||||    
T  23191357 ggttaatgcaaattaagtttacttatgttcaatttatgggtatattagccattct 23191303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 1421499 - 1421530
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  1421499 ggttaatgtaaatttagtttacttatgttcaa 1421530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3390423 - 3390392
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  3390423 ggttaatgtaaatttagtttacttatgttcaa 3390392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 6230930 - 6230965
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaactta 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  6230930 ggttaatgtaaattaagtttacttatgttcaactta 6230965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35065527 - 35065496
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  35065527 ggttaatgtaaatttagtttacttatgttcaa 35065496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35065765 - 35065734
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  35065765 ggttaatgtaaatttagtttacttatgttcaa 35065734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 36483951 - 36483920
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  36483951 ggttaatgtaaatttagtttacttatgttcaa 36483920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 42222075 - 42222106
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  42222075 ggttaatgtaaatttagtttacttatgttcaa 42222106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 42222235 - 42222266
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  42222235 ggttaatgtaaatttagtttacttatgttcaa 42222266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 6231011 - 6231041
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  6231011 gggtatattagtcattctggggtgtaacttg 6231041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6230894 - 6230931
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  6230894 ggttaatgtaaattaagtttacttatgttcaatttagg 6230931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8335743 - 8335780
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8335743 ggttaatgtaaattaagtttacttatgttcaatttagg 8335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8336043 - 8336080
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8336043 ggttaatgtaaattaagtttacttatgttcaatttagg 8336080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8782478 - 8782441
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8782478 ggttaatgtaaattcagtttacttatgttcaatttagg 8782441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8836008 - 8835971
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8836008 ggttaatgtaaattaagtttacttatgttcaatttagg 8835971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8836237 - 8836200
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8836237 ggttaatgtaaattaagtttacttatgttcaatttagg 8836200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10691625 - 10691588
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  10691625 ggttaatgtaaattaagtttacttatgttcaatttagg 10691588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15472376 - 15472339
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  15472376 ggttaatgtaaattaagtttacttatgttcaatttagg 15472339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18186171 - 18186208
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18186171 ggttaatgtaaattaagtttacttatgttcaatttagg 18186208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18617830 - 18617867
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18617830 ggttaatgtaaattaagtttacttatgttcaatttagg 18617867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 18618012 - 18618049
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  18618012 ggttaatgtaaattaagtttacttatgttcaatttagg 18618049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 23191588 - 23191551
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  23191588 ggttaatgtaaattaagtttacttatgttcaatttagg 23191551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25031846 - 25031883
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  25031846 ggttaatgtaaattaagtttacttatgttcaatttagg 25031883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25031954 - 25031991
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  25031954 ggttaatgtaaattaagtttacttatgttcaatttagg 25031991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27770967 - 27770930
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27770967 ggttaatgtaaattaagtttacttatgttcaatttagg 27770930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28349453 - 28349490
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28349453 ggttaatgtaaattaagtttacttatgttcaatttagg 28349490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 28349489 - 28349526
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28349489 ggttaatgtaaattaagtttacttatgttcaatttagg 28349526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29296613 - 29296650
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29296613 ggttaatgtaaattaagtttacttatgttcaatttagg 29296650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29296829 - 29296866
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29296829 ggttaatgtaaattaagtttacttatgttcaatttagg 29296866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33569837 - 33569800
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33569837 ggttaatgtaaattcagtttacttatgttcaatttagg 33569800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35065563 - 35065526
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  35065563 ggttaatgtaaattaagtttacttatgttcaatttagg 35065526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35065863 - 35065826
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  35065863 ggttaatgtaaattaagtttacttatgttcaatttagg 35065826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36484185 - 36484148
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36484185 ggttaatgtaaattcagtttacttatgttcaatttagg 36484148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41743066 - 41743029
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  41743066 ggttaatgtaaattaagtttacttatgttcaatttagg 41743029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 3390458 - 3390422
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  3390458 gttaatgtaaattaagtttacttatgttcaatttagg 3390422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 15472132 - 15472096
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  15472132 gttaatgtaaattaagtttacttatgttcaatttagg 15472096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 68
Target Start/End: Original strand, 18618163 - 18618195
Alignment:
Q  36 aggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||| ||||||||||||    
T  18618163 aggggtatattagtcattctagggtgtaacttg 18618195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 23191468 - 23191432
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  23191468 gttaatgtaaattaagtttacttatgttcaatttagg 23191432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 33591447 - 33591411
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  33591447 gttaatgtaaattaagtttacttatgttcaatttagg 33591411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 2e-30; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17332828 - 17332761
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17332828 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 17332761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 22498140 - 22498207
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22498140 ggttaatgtaaatttagtttacttatattcaacttaggggtatattagtcattctggggtgtaacttg 22498207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26717237 - 26717170
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  26717237 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggagtgtaacttg 26717170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 43219620 - 43219687
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  43219620 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggcgtgtaacttg 43219687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 49804124 - 49804059
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49804124 ttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 49804059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 26230124 - 26230191
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26230124 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 26230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 31655711 - 31655809
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctt 99  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||        ||||||||| |||||||||||||    
T  31655711 ggttaatgtaaattaagtttacttatgttcaatttatgggtatattagtcattctggggtgtaacttgttttttttggggtgtgactagcaccggtctt 31655809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 68
Target Start/End: Original strand, 9746531 - 9746597
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  9746531 gttaatgtaaattcagtttacttatgttcaatttaggggtatattagtcattctggagtgtaacttg 9746597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 48478443 - 48478508
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  48478443 ttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctgaggtgtaacttg 48478508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 12227254 - 12227187
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  12227254 ggttaatgtaaattaagtttacttatgttcaatttaagggtatattagtcattctggagtgtaacttg 12227187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 41113520 - 41113454
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||| |||||||||||||||||||    
T  41113520 ggttaatgtaaattaagtttacttatgttcaatttagggatatattaatcattctggggtgtaactt 41113454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 53019724 - 53019789
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| |||||||||||||||||||||||||  |||||||||||||| |||||||||||    
T  53019724 ggttaatgtaaattaagtttacttatgttcaacttagggg--tattagtcattctgaggtgtaacttg 53019789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13287853 - 13287920
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||  ||||||||||    
T  13287853 ggttaatgtaaattaagtttacttatgttcaatttagggatatattagtcattctgaagtgtaacttg 13287920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 10048532 - 10048464
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattct-ggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||  ||||||||||||    
T  10048532 ggttaatgtaaattaagtttacttatgttcaatttaagggtatattagtcattctaagggtgtaacttg 10048464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 28554644 - 28554577
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||   ||||||||||    
T  28554644 ggttaatgtaaattaaatttacttatgttcaatttaggggtatattagtcattctatagtgtaacttg 28554577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9746309 - 9746340
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  9746309 ggttaatgtaaatttagtttacttatgttcaa 9746340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 9746422 - 9746453
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  9746422 ggttaatgtaaatttagtttacttatgttcaa 9746453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 10048738 - 10048707
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  10048738 ggttaatgtaaatttagtttacttatgttcaa 10048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12227538 - 12227507
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  12227538 ggttaatgtaaatttagtttacttatgttcaa 12227507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 12227574 - 12227543
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  12227574 ggttaatgtaaatttagtttacttatgttcaa 12227543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 13287307 - 13287338
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  13287307 ggttaatgtaaatttagtttacttatgttcaa 13287338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22498052 - 22498083
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  22498052 ggttaatgtaaatttagtttacttatgttcaa 22498083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 26229883 - 26229914
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  26229883 ggttaatgtaaatttagtttacttatgttcaa 26229914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26717299 - 26717268
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  26717299 ggttaatgtaaatttagtttacttatgttcaa 26717268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 33583985 - 33584020
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaactta 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  33583985 ggttaatgtaaattaagtttacttatgttcaactta 33584020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 41113664 - 41113633
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  41113664 ggttaatgtaaatttagtttacttatgttcaa 41113633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 43219532 - 43219563
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  43219532 ggttaatgtaaatttagtttacttatgttcaa 43219563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 44378417 - 44378452
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaactta 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  44378417 ggttaatgtaaattaagtttacttatgttcaactta 44378452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 1545388 - 1545358
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  1545388 gggtatattagtcattctggggtgtaacttg 1545358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 8067908 - 8067878
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  8067908 gggtatattagtcattctggggtgtaacttg 8067878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 22497990 - 22498020
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttca 31  Q
    |||||||||||||||||||||||||||||||    
T  22497990 ggttaatgtaaatttagtttacttatgttca 22498020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 23151593 - 23151623
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  23151593 gggtatattagtcattctggggtgtaacttg 23151623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 33584066 - 33584096
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  33584066 gggtatattagtcattctggggtgtaacttg 33584096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 51166575 - 51166545
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  51166575 gggtatattagtcattctggggtgtaacttg 51166545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 502177 - 502214
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  502177 ggttaatataaatttagtttacttatgttcaatttagg 502214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1545505 - 1545468
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  1545505 ggttaatgtaaattaagtttacttatgttcaatttagg 1545468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5273010 - 5272973
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  5273010 ggttaatgtaaattaagtttacttatgttcaatttagg 5272973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5273288 - 5273251
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  5273288 ggttaatgtaaattaagtttacttatgttcaatttagg 5273251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 8068231 - 8068194
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8068231 ggttaatgtaaattaagtttacttatgttcaatttagg 8068194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 10048568 - 10048531
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  10048568 ggttaatgtaaattaagtttacttatgttcaatttagg 10048531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 10660209 - 10660246
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  10660209 ggttaatgtaaattaagtttacttatgttcaatttagg 10660246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 13287271 - 13287308
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  13287271 ggttaatgtaaattaagtttacttatgttcaatttagg 13287308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 13287365 - 13287394
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||    
T  13287365 ttaatgtaaatttagtttacttatgttcaa 13287394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 23151476 - 23151513
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  23151476 ggttaatgtaaattaagtttacttatgttcaatttagg 23151513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24349845 - 24349882
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  24349845 ggttaatgtaaattaagtttacttatgttcaatttagg 24349882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 24406416 - 24406453
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  24406416 ggttaatgtaaattaagtttacttatgttcaatttagg 24406453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27449912 - 27449949
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27449912 ggttaatgtaaattaagtttacttatgttcaatttagg 27449949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28554878 - 28554841
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28554878 ggttaatgtaaattaagtttacttatgttcaatttagg 28554841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 31655486 - 31655523
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  31655486 ggttaatgtaaattaagtttacttatgttcaatttagg 31655523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 33583949 - 33583986
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33583949 ggttaatgtaaattaagtttacttatgttcaatttagg 33583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37126083 - 37126046
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  37126083 ggttaatgtaaattaagtttacttatgttcaatttagg 37126046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37126348 - 37126311
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  37126348 ggttaatgtaaattaagtttacttatgttcaatttagg 37126311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38252940 - 38252977
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  38252940 ggttaatgtaaattgagtttacttatgttcaatttagg 38252977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 38253168 - 38253205
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  38253168 ggttaatgtaaattaagtttacttatgttcaatttagg 38253205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 41113626 - 41113597
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||    
T  41113626 ttaatgtaaatttagtttacttatgttcaa 41113597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41113806 - 41113769
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  41113806 ggttaatgtaaatttagtttacttacgttcaatttagg 41113769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 43219298 - 43219335
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  43219298 ggttaatgtaaattcagtttacttatgttcaatttagg 43219335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 48478214 - 48478251
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  48478214 ggttaatgtaaattcagtttacttatgttcaatttagg 48478251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49804281 - 49804244
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  49804281 ggttaatgtaaattcagtttacttatgttcaatttagg 49804244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49804317 - 49804280
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  49804317 ggttaatgtaaattaagtttacttatgttcaatttagg 49804280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49804520 - 49804483
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  49804520 ggttaatgtaaattcagtttacttatgttcaatttagg 49804483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51166692 - 51166655
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  51166692 ggttaatgtaaattaagtttacttatgttcaatttagg 51166655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 51166885 - 51166848
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  51166885 ggttaatgtaaattaagtttacttatgttcaatttagg 51166848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51754844 - 51754881
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  51754844 ggttaatgtaaattaagtttacttatgttcaatttagg 51754881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 51755001 - 51755038
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  51755001 ggttaatgtaaattaagtttacttatgttcaatttagg 51755038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 53019487 - 53019524
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  53019487 ggttaatgtaaattcagtttacttatgttcaatttagg 53019524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1545891 - 1545855
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  1545891 ggttaatgtaaattaagtttacttatgttcaatttag 1545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 2446552 - 2446588
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  2446552 ggttaatgtaaattaagtttacttatgttcaatttag 2446588  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 5272974 - 5272938
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  5272974 ggttaatgtaaattaagtttacttatgttcaatttag 5272938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Complemental strand, 8828283 - 8828247
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  8828283 gttaatgtaaattgagtttacttatgttcaatttagg 8828247  T

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Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 27450020 - 27450056
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  27450020 ggttaatgtaaattaagtttacttatgttcaatttag 27450056  T

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Target: scaffold0189 (Bit Score: 64; Significance: 4e-28; HSPs: 6)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26615 - 26548
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26615 ggttaatgtaaatttagtttacttatattcaacttaggggtatattagtcattctggggtgtaacttg 26548  T

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Target: scaffold0189; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27132 - 27095
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27132 ggttaatgtaaatttagtttacttatgttcaatttagg 27095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27405 - 27368
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  27405 ggttaatgtaaatttagtttacttatgttcaatttagg 27368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26703 - 26672
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  26703 ggttaatgtaaatttagtttacttatgttcaa 26672  T

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Target: scaffold0189; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 26823 - 26792
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  26823 ggttaatgtaaatttagtttacttatgttcaa 26792  T

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Target: scaffold0189; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26859 - 26822
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26859 ggttaatgtaaattcagtttacttatgttcaatttagg 26822  T

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Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 79)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 49331381 - 49331282
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctta 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||        ||||||||| ||||||||||||||    
T  49331381 ggttaatgtaaatttagtttacttatgttcaacttagggatatattagtcattctggagtgtaacttgttttttttggggtgtgactagcaccggtctta 49331282  T

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Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 35948724 - 35948658
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  35948724 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctagggtgtaactt 35948658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 22169831 - 22169932
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtcttatt 102  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||        ||||||||| ||||||| ||||||||    
T  22169831 ttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttgttttttttggggtgtgactagcaccagtcttatt 22169930  T
Q  103 at 104  Q
    ||    
T  22169931 at 22169932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20492845 - 20492912
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20492845 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 20492912  T

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Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 36308306 - 36308239
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  36308306 ggttaatgtaaatttagtttacttatgttcaatttaggggtatattagtcattttggggtgtaacttg 36308239  T

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Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 54203163 - 54203230
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||    
T  54203163 ggttaatgtaaatttagtttacttatgctcaacttaggggtttattagtcattctggggtgtaacttg 54203230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 56163146 - 56163213
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56163146 ggttaatgtaaattaaatttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 56163213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17445221 - 17445154
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  17445221 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctagggtgtaacttg 17445154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 29932833 - 29932766
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  29932833 ggttaatgtaaatttagtttatttatgttcaacttaggggtatattagtcattctgaagtgtaacttg 29932766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 33961008 - 33960941
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| |||||||||    
T  33961008 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctgggatgtaacttg 33960941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 55542263 - 55542326
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaa 64  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  55542263 ggttaatgtaaattcagtttacttatgttcaacttaggggtatatttgtcattctggggtgtaa 55542326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11004986 - 11004920
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  11004986 ggttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattttagggtgtaactt 11004920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 43957354 - 43957254
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctta 100  Q
    |||||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||        ||||||||| ||||||| ||||||    
T  43957354 ggttaatgtaaatttagtttacttatttttaacttagtggtttattagtcattctggggtgtaacttgttttttttggggtgtgactagcaccagtctta 43957255  T
Q  101 t 101  Q
    |    
T  43957254 t 43957254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 27766990 - 27766923
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattct-ggggtgtaactt 67  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  27766990 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctgggggtgtaactt 27766923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26488797 - 26488860
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaa 64  Q
    |||||||||||||| |||||||||||||| |||||| || ||||||||||||||||||||||||    
T  26488797 ggttaatgtaaattaagtttacttatgtttaacttaaggatatattagtcattctggggtgtaa 26488860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 2492535 - 2492601
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||||| | |||||||||||    
T  2492535 ggttaatgtaaattaagtttacttatgttcaatttatgggtatattagtcatttttgggtgtaactt 2492601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11005197 - 11005160
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  11005197 ggttaatgtaaatttagtttacttatgttcaatttagg 11005160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22169725 - 22169762
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  22169725 ggttaatgtaaatttagtttacttatgttcaatttagg 22169762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 2492360 - 2492391
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  2492360 ggttaatgtaaatttagtttacttatgttcaa 2492391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 11005161 - 11005130
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  11005161 ggttaatgtaaatttagtttacttatgttcaa 11005130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22169654 - 22169685
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  22169654 ggttaatgtaaatttagtttacttatgttcaa 22169685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24744507 - 24744476
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  24744507 ggttaatgtaaatttagtttacttatgttcaa 24744476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 27767120 - 27767089
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  27767120 ggttaatgtaaatttagtttacttatgttcaa 27767089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 29932992 - 29932961
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  29932992 ggttaatgtaaatttagtttacttatgttcaa 29932961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33961377 - 33961346
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  33961377 ggttaatgtaaatttagtttacttatgttcaa 33961346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 33961547 - 33961516
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  33961547 ggttaatgtaaatttagtttacttatgttcaa 33961516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 35948961 - 35948930
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  35948961 ggttaatgtaaatttagtttacttatgttcaa 35948930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 36308518 - 36308487
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  36308518 ggttaatgtaaatttagtttacttatgttcaa 36308487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 43957416 - 43957385
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  43957416 ggttaatgtaaatttagtttacttatgttcaa 43957385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 49331443 - 49331412
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  49331443 ggttaatgtaaatttagtttacttatgttcaa 49331412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 54202926 - 54202957
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  54202926 ggttaatgtaaatttagtttacttatgttcaa 54202957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 54203101 - 54203132
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  54203101 ggttaatgtaaatttagtttacttatgttcaa 54203132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 56163016 - 56163047
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  56163016 ggttaatgtaaatttagtttacttatgttcaa 56163047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 22169690 - 22169720
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaa 32  Q
    |||||||||||||||||||||||||||||||    
T  22169690 gttaatgtaaatttagtttacttatgttcaa 22169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 41763508 - 41763478
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  41763508 gggtatattagtcattctggggtgtaacttg 41763478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3874236 - 3874199
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3874236 ggttaatgtaaattaagtttacttatgttcaatttagg 3874199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3931535 - 3931498
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3931535 ggttaatgtaaattaagtttacttatgttcaatttagg 3931498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 3931654 - 3931617
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3931654 ggttaatgtaaattaagtttacttatgttcaatttagg 3931617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7327237 - 7327200
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  7327237 ggttaatgtaaattaagtttacttatgttcaatttagg 7327200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 7553812 - 7553775
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  7553812 ggttaatgtaaattaagtttacttatgttcaatttagg 7553775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11005233 - 11005196
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11005233 ggttaatgtaaattaagtttacttatgttcaatttagg 11005196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 11309126 - 11309163
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11309126 ggttaatgtaaattcagtttacttatgttcaatttagg 11309163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11381659 - 11381622
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11381659 ggttaatgtaaattcagtttacttatgttcaatttagg 11381622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22169512 - 22169549
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||||||||||||||| |||||| |||||    
T  22169512 ggttaatgtaaatttagtttacttacgttcaatttagg 22169549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24744543 - 24744506
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  24744543 ggttaatgtaaattaagtttacttatgttcaatttagg 24744506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 27767217 - 27767180
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27767217 ggttaatgtaaattcagtttacttatgttcaatttagg 27767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28573242 - 28573205
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28573242 ggttaatgtaaattaagtttacttatgttcaatttagg 28573205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28573507 - 28573470
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28573507 ggttaatgtaaattaagtttacttatgttcaatttagg 28573470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28867380 - 28867343
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28867380 ggttaatgtaaattaagtttacttatgttcaatttagg 28867343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29924023 - 29924060
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29924023 ggttaatgtaaattaagtttacttatgttcaatttagg 29924060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29933089 - 29933052
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29933089 ggttaatgtaaattcagtttacttatgttcaatttagg 29933052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 33961156 - 33961127
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||    
T  33961156 ttaatgtaaatttagtttacttatgttcaa 33961127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33961243 - 33961206
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33961243 ggttaatgtaaattaagtttacttatgttcaatttagg 33961206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 33961413 - 33961376
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  33961413 ggttaatgtaaattaagtttacttatgttcaatttagg 33961376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35949058 - 35949021
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  35949058 ggttaatgtaaattcagtttacttatgttcaatttagg 35949021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36224653 - 36224616
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36224653 ggttaatgtaaattaagtttacttatgttcaatttagg 36224616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36224799 - 36224762
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36224799 ggttaatgtaaattaagtttacttatgttcaatttagg 36224762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36308342 - 36308305
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36308342 ggttaatgtaaattcagtttacttatgttcaatttagg 36308305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36308554 - 36308517
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36308554 ggttaatgtaaattcagtttacttatgttcaatttagg 36308517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36308590 - 36308553
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36308590 ggttaatgtaaattaagtttacttatgttcaatttagg 36308553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36431863 - 36431826
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36431863 ggttaatgtaaattaagtttacttatgttcaatttagg 36431826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36431899 - 36431862
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36431899 ggttaatgtaaattaagtttacttatgttcaatttagg 36431862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36432153 - 36432116
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  36432153 ggttaatgtaaattaagtttacttatgttcaatttagg 36432116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 39677367 - 39677330
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  39677367 ggttaatgtaaattaagtttacttatgttcaatttagg 39677330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45884980 - 45885017
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  45884980 ggttaatgtaaattaagtttacttatgttcaatttagg 45885017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45885245 - 45885282
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  45885245 ggttaatgtaaattaagtttacttatgttcaatttagg 45885282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48868651 - 48868614
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  48868651 ggttaatgtaaattaagtttacttatgttcaatttagg 48868614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 48874036 - 48873999
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  48874036 ggttaatgtaaattaagtttacttatgttcaatttagg 48873999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 49331677 - 49331640
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  49331677 ggttaatgtaaattcagtttacttatgttcaatttagg 49331640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50622085 - 50622122
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  50622085 ggttaatgtaaattaagtttacttatgttcaatttagg 50622122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50622301 - 50622338
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  50622301 ggttaatgtaaattaagtttacttatgttcaatttagg 50622338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 50622418 - 50622447
Alignment:
Q  38 gggtatattagtcattctggggtgtaactt 67  Q
    ||||||||||||||||||||||||||||||    
T  50622418 gggtatattagtcattctggggtgtaactt 50622447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 54202793 - 54202830
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  54202793 ggttaatgtaaattcagtttacttatgttcaatttagg 54202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 54202829 - 54202866
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  54202829 ggttaatgtaaattcagtttacttatgttcaatttagg 54202866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 55281802 - 55281765
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  55281802 ggttaatgtaaattaagtttacttatgttcaatttagg 55281765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 55282139 - 55282102
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  55282139 ggttaatgtaaattaagtttacttatgttcaatttagg 55282102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 56162980 - 56163017
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  56162980 ggttaatgtaaattcagtttacttatgttcaatttagg 56163017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 22169476 - 22169504
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgtt 29  Q
    |||||||||||||||||||||||||||||    
T  22169476 ggttaatgtaaatttagtttacttatgtt 22169504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 68
Target Start/End: Complemental strand, 33115471 - 33115443
Alignment:
Q  40 gtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||    
T  33115471 gtatattagtcattctggggtgtaacttg 33115443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 3416895 - 3416962
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  3416895 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggagtgtaacttg 3416962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 13556681 - 13556748
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13556681 ggttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 13556748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 25829452 - 25829550
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctt 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||||||||| |||||||||||||    
T  25829452 ggttaatgtaaattaagtttacttatgttcaacttaggggtatactagtcattctggggtgtaacttgttttttttggggtgtgactagcaccggtctt 25829550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 26769684 - 26769617
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26769684 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 26769617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39465205 - 39465272
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  39465205 ggttaatgtaaattaagtttacttatgttcaacttatgggtatattagtcattctggggtgtaacttg 39465272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 40360399 - 40360462
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaa 64  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40360399 ggttaatgtaaattaagtttacttatgttcaacttaggggtatattagtcattctggggtgtaa 40360462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 24179828 - 24179761
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  24179828 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctagggtgtaacttg 24179761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 30361944 - 30362011
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  30361944 ggttaatgtaaattaagtttacttatgttcaatttatgggtatattagtcattctggggtgtaacttg 30362011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31760185 - 31760086
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttgnnnnnnnnggggtgtgattagcaccggtctta 100  Q
    |||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||         ||||||||| ||||||||||||||    
T  31760185 ggttaatgtaaattaagtttacttatgttcaatttaggggtatatgagtcattctggggtgtaacttattttttttggggtgtgactagcaccggtctta 31760086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 44233509 - 44233442
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  44233509 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggagtgtaacttg 44233442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 45501854 - 45501787
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  45501854 ggttaatgtaaattaagtttacttatgttcaatttagggatatattagtcattctggggtgtaacttg 45501787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 4489605 - 4489538
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| | ||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  4489605 ggttaatgtaaattaaatttacttgtgttcaatttaggggtatattagtcattctggggtgtaacttg 4489538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 17580590 - 17580523
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||||||| ||||||||||    
T  17580590 ggttaatgtaaattaagtttacttatgttcaatttagaggtatattagtcattctggagtgtaacttg 17580523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 25729643 - 25729576
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    ||||||||||||||  ||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  25729643 ggttaatgtaaattacgtttacttatgtttaatttaggggtatattagtcattctggggtgtaacttg 25729576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 35720301 - 35720368
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||| ||||||||||||    
T  35720301 ggttaatgtaaattaagtttacttatattcaatttaggggtatattagtcattctagggtgtaacttg 35720368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 47534672 - 47534739
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||| ||||||| ||||||||||||    
T  47534672 ggttaatgtaaattaagtttatttatgttcaacttaggggtatattaatcattctagggtgtaacttg 47534739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 46675538 - 46675601
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||    |||||||||||  ||||||||||||||||||||||||||||||    
T  46675538 ggttaatgtaaatttagttta----tgttcaacttaaaggtatattagtcattctggggtgtaacttg 46675601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3416662 - 3416693
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  3416662 ggttaatgtaaatttagtttacttatgttcaa 3416693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3416833 - 3416864
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  3416833 ggttaatgtaaatttagtttacttatgttcaa 3416864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 24180047 - 24180016
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  24180047 ggttaatgtaaatttagtttacttatgttcaa 24180016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 25829277 - 25829308
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  25829277 ggttaatgtaaatttagtttacttatgttcaa 25829308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 35720088 - 35720119
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  35720088 ggttaatgtaaatttagtttacttatgttcaa 35720119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 40360269 - 40360300
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  40360269 ggttaatgtaaatttagtttacttatgttcaa 40360300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 45502138 - 45502107
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  45502138 ggttaatgtaaatttagtttacttatgttcaa 45502107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 46675476 - 46675507
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  46675476 ggttaatgtaaatttagtttacttatgttcaa 46675507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 47534542 - 47534573
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  47534542 ggttaatgtaaatttagtttacttatgttcaa 47534573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 50501449 - 50501479
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  50501449 gggtatattagtcattctggggtgtaacttg 50501479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3047183 - 3047220
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3047183 ggttaatgtaaattaagtttacttatgttcaatttagg 3047220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3047452 - 3047489
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3047452 ggttaatgtaaattaagtttacttatgttcaatttagg 3047489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3771118 - 3771155
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3771118 ggttaatgtaaattaagtttacttatgttcaatttagg 3771155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 3771154 - 3771191
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  3771154 ggttaatgtaaattaagtttacttatgttcaatttagg 3771191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 4489836 - 4489799
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  4489836 ggttaatgtaaattaagtttacttatgttcaatttagg 4489799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 6979323 - 6979360
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  6979323 ggttaatgtaaattaagtttacttatgttcaatttagg 6979360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8896154 - 8896191
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8896154 ggttaatgtaaattaagtttacttatgttcaatttagg 8896191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11335431 - 11335394
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11335431 ggttaatgtaaattaagtttacttatgttcaatttagg 11335394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 11493451 - 11493414
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  11493451 ggttaatgtaaattaagtttacttatgttcaatttagg 11493414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15475456 - 15475419
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  15475456 ggttaatgtaaattaagtttacttatgttcaatttagg 15475419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 15475685 - 15475648
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  15475685 ggttaatgtaaattaagtttacttatgttcaatttagg 15475648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 17925949 - 17925912
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  17925949 ggttaatgtaaattcagtttacttatgttcaatttagg 17925912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 24180144 - 24180107
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  24180144 ggttaatgtaaattcagtttacttatgttcaatttagg 24180107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25729679 - 25729642
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  25729679 ggttaatgtaaattaagtttacttatgttcaatttagg 25729642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 25729751 - 25729714
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||||| |||||||||||||||| |||||    
T  25729751 ggttaatgtaaatttggtttacttatgttcaatttagg 25729714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 25829180 - 25829217
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  25829180 ggttaatgtaaattcagtttacttatgttcaatttagg 25829217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26769958 - 26769921
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26769958 ggttaatgtaaattaagtttacttatgttcaatttagg 26769921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28068426 - 28068389
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28068426 ggttaatgtaaattaagtttacttatgttcaatttagg 28068389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 28226048 - 28226011
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  28226048 ggttaatgtaaattaagtttacttatgttcaatttagg 28226011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29033371 - 29033334
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29033371 ggttaatgtaaattaagtttacttatgttcaatttagg 29033334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 30361576 - 30361613
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  30361576 ggttaatgtaaattaagtttacttatgttcaatttagg 30361613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31760416 - 31760379
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  31760416 ggttaatgtaaattaagtttacttatgttcaatttagg 31760379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37093539 - 37093502
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  37093539 ggttaatgtaaattaagtttacttatgttcaatttagg 37093502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37093648 - 37093611
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  37093648 ggttaatgtaaattaagtttacttatgttcaatttagg 37093611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 37093877 - 37093840
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  37093877 ggttaatgtaaattaagtttacttatgttcaatttagg 37093840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 40360172 - 40360209
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  40360172 ggttaatgtaaattcagtttacttatgttcaatttagg 40360209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44054522 - 44054485
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  44054522 ggttaatgtaaattaagtttacttatgttcaatttagg 44054485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 44233731 - 44233694
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  44233731 ggttaatgtaaattaagtttacttatgttcaatttagg 44233694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 45502174 - 45502137
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  45502174 ggttaatgtaaattaagtttacttatgttcaatttagg 45502137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46233816 - 46233779
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  46233816 ggttaatgtaaattaagtttacttatgttcaatttagg 46233779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 46234057 - 46234020
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  46234057 ggttaatgtaaattaagtttacttatgttcaatttagg 46234020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 47534506 - 47534543
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  47534506 ggttaatgtaaattcagtttacttatgttcaatttagg 47534543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 39464938 - 39464974
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  39464938 ggttaatgtaaattcagtttacttatgttcaatttag 39464974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 49457263 - 49457299
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  49457263 ggttaatgtaaattaagtttacttatgttcaatttag 49457299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 45085030 - 45085096
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45085030 ggttaatgtaaatttagtttacttatgttcaacttagaggtatattagtcattctggggtgtaactt 45085096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 8353172 - 8353239
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8353172 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 8353239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 20819589 - 20819656
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  20819589 ggttaatgtaaattaagtttatttatgttcaatttaggggtatattagtcattctggggtgtaacttg 20819656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 32138250 - 32138317
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  32138250 ggttaatgtaaattaagtttacttatgttcaatttaggagtatattagtcattctggggtgtaacttg 32138317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33411879 - 33411946
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33411879 ggttaatgtaaattaaatttacttatgttcaatttaggggtatattagtcattctggggtgtaacttg 33411946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 38098150 - 38098083
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  38098150 ggttaatgtaaattaagtttacttatgttcaacttaagggtatattagtcattttggggtgtaacttg 38098083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 27720141 - 27720207
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaactt 67  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  27720141 ggttaatgtaaattaagtttacttatgttcaatttaggggtatattaatcattctggggtgtaactt 27720207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 11021093 - 11021158
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||    
T  11021093 ttaatgtaaattaagtttacttatgttcaatttaggggtatattagtcattctggagtgtaacttg 11021158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26415772 - 26415709
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttaggggtatattagtcattctggggtgtaa 64  Q
    |||||||||||||| |||||||||||||  || |||||||||||||||||||| ||||||||||    
T  26415772 ggttaatgtaaattcagtttacttatgtgtaatttaggggtatattagtcattatggggtgtaa 26415709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45084994 - 45085031
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||||||||||||||||||||| |||||    
T  45084994 ggttaatgtaaatttagtttacttatgttcaatttagg 45085031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 8352865 - 8352896
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  8352865 ggttaatgtaaatttagtttacttatgttcaa 8352896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11020769 - 11020800
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  11020769 ggttaatgtaaatttagtttacttatgttcaa 11020800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33411387 - 33411418
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  33411387 ggttaatgtaaatttagtttacttatgttcaa 33411418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 33411449 - 33411480
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  33411449 ggttaatgtaaatttagtttacttatgttcaa 33411480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 38098280 - 38098249
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  38098280 ggttaatgtaaatttagtttacttatgttcaa 38098249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 45084819 - 45084850
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||||    
T  45084819 ggttaatgtaaatttagtttacttatgttcaa 45084850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Complemental strand, 35392890 - 35392860
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  35392890 gggtatattagtcattctggggtgtaacttg 35392860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 32
Target Start/End: Original strand, 39780832 - 39780862
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaa 32  Q
    |||||||||||||||||||||||||||||||    
T  39780832 gttaatgtaaatttagtttacttatgttcaa 39780862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 482752 - 482715
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  482752 ggttaatgtaaattaagtttacttatgttcaatttagg 482715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 482860 - 482823
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  482860 ggttaatgtaaattaagtttacttatgttcaatttagg 482823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 8352767 - 8352804
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  8352767 ggttaatgtaaattaagtttacttatgttcaatttagg 8352804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 12987081 - 12987118
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  12987081 ggttaatgtaaattaagtttacttatgttcaatttagg 12987118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20187893 - 20187930
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  20187893 ggttaatgtaaattaagtttacttatgttcaatttagg 20187930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 20819370 - 20819407
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  20819370 ggttaatgtaaattaagtttacttatgttcaatttagg 20819407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 26416002 - 26415965
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  26416002 ggttaatgtaaattaagtttacttatgttcaatttagg 26415965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27719535 - 27719572
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27719535 ggttaatgtaaattaagtttacttatgttcaatttagg 27719572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27719607 - 27719644
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27719607 ggttaatgtaaattaagtttacttatgttcaatttagg 27719644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 27719910 - 27719947
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  27719910 ggttaatgtaaattaagtttacttatgttcaatttagg 27719947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29998140 - 29998177
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29998140 ggttaatgtaaattaagtttacttatgttcaatttagg 29998177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 29998297 - 29998334
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  29998297 ggttaatgtaaattaagtttacttatgttcaatttagg 29998334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 30699717 - 30699680
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  30699717 ggttaatgtaaattaagtttacttatgttcaatttagg 30699680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32138007 - 32138044
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  32138007 ggttaatgtaaattaagtttacttatgttcaatttagg 32138044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 32834798 - 32834835
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  32834798 ggttaatgtaaattaagtttacttatgttcaatttagg 32834835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35393223 - 35393186
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  35393223 ggttaatgtaaattaagtttacttatgttcaatttagg 35393186  T

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Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38098377 - 38098340
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  38098377 ggttaatgtaaattcagtttacttatgttcaatttagg 38098340  T

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Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 38098413 - 38098376
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  38098413 ggttaatgtaaattaagtttacttatgttcaatttagg 38098376  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 32
Target Start/End: Original strand, 39780656 - 39780685
Alignment:
Q  3 ttaatgtaaatttagtttacttatgttcaa 32  Q
    ||||||||||||||||||||||||||||||    
T  39780656 ttaatgtaaatttagtttacttatgttcaa 39780685  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 45084722 - 45084759
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  45084722 ggttaatgtaaattcagtttacttatgttcaatttagg 45084759  T

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Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 11020806 - 11020842
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||||||||||||| |||||| |||||    
T  11020806 gttaatgtaaatttagtttacttacgttcaatttagg 11020842  T

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Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 11021055 - 11021091
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  11021055 ggttaatgtaaattaagtttacttatgttcaatttag 11021091  T

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Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20188001 - 20188037
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  20188001 ggttaatgtaaattcagtttacttatgttcaatttag 20188037  T

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Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 20207070 - 20207106
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttag 37  Q
    |||||||||||||| ||||||||||||||||| ||||    
T  20207070 ggttaatgtaaattcagtttacttatgttcaatttag 20207106  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 38
Target Start/End: Original strand, 33411352 - 33411388
Alignment:
Q  2 gttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  33411352 gttaatgtaaattaagtttacttatgttcaatttagg 33411388  T

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Target: scaffold0081 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 12228 - 12258
Alignment:
Q  38 gggtatattagtcattctggggtgtaacttg 68  Q
    |||||||||||||||||||||||||||||||    
T  12228 gggtatattagtcattctggggtgtaacttg 12258  T

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Target: scaffold0562 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0562
Description:

Target: scaffold0562; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 5055 - 5018
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  5055 ggttaatgtaaattaagtttacttatgttcaatttagg 5018  T

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Target: scaffold0041 (Bit Score: 30; Significance: 0.00000008; HSPs: 4)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 67
Target Start/End: Complemental strand, 104935 - 104906
Alignment:
Q  38 gggtatattagtcattctggggtgtaactt 67  Q
    ||||||||||||||||||||||||||||||    
T  104935 gggtatattagtcattctggggtgtaactt 104906  T

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Target: scaffold0041; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 105052 - 105015
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  105052 ggttaatgtaaattcagtttacttatgttcaatttagg 105015  T

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Target: scaffold0041; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 105232 - 105195
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  105232 ggttaatgtaaattaagtttacttatgttcaatttagg 105195  T

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Target: scaffold0041; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 105411 - 105374
Alignment:
Q  1 ggttaatgtaaatttagtttacttatgttcaacttagg 38  Q
    |||||||||||||| ||||||||||||||||| |||||    
T  105411 ggttaatgtaaattaagtttacttatgttcaatttagg 105374  T

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