View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13386_high_25 (Length: 317)

Name: NF13386_high_25
Description: NF13386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13386_high_25
NF13386_high_25
[»] chr3 (8 HSPs)
chr3 (19-307)||(21093662-21093951)
chr3 (92-299)||(29650460-29650666)
chr3 (134-274)||(30176851-30176991)
chr3 (114-226)||(10711148-10711260)
chr3 (96-229)||(14262814-14262946)
chr3 (96-226)||(14305961-14306091)
chr3 (96-170)||(8900427-8900501)
chr3 (96-228)||(19801309-19801441)
[»] chr4 (15 HSPs)
chr4 (134-299)||(13908229-13908394)
chr4 (96-296)||(13933619-13933817)
chr4 (97-225)||(20847821-20847949)
chr4 (105-293)||(1919561-1919753)
chr4 (96-292)||(19033311-19033510)
chr4 (96-164)||(9198117-9198185)
chr4 (96-298)||(11923212-11923412)
chr4 (104-231)||(16028433-16028561)
chr4 (96-166)||(10115465-10115535)
chr4 (126-231)||(16672502-16672607)
chr4 (96-232)||(17542612-17542748)
chr4 (96-164)||(9251696-9251764)
chr4 (136-190)||(12407439-12407493)
chr4 (96-164)||(9269483-9269551)
chr4 (96-190)||(12451675-12451768)
[»] scaffold0171 (1 HSPs)
scaffold0171 (96-308)||(3548-3758)
[»] chr7 (10 HSPs)
chr7 (96-293)||(17492375-17492572)
chr7 (96-293)||(17560642-17560839)
chr7 (104-299)||(4548905-4549099)
chr7 (96-231)||(8250939-8251074)
chr7 (96-231)||(16175376-16175511)
chr7 (206-305)||(17998949-17999047)
chr7 (96-226)||(14266883-14267013)
chr7 (135-257)||(26427510-26427632)
chr7 (104-157)||(6461014-6461067)
chr7 (96-156)||(13488333-13488393)
[»] chr6 (12 HSPs)
chr6 (96-255)||(21746616-21746775)
chr6 (104-308)||(13121928-13122132)
chr6 (138-290)||(22457291-22457442)
chr6 (96-228)||(22786002-22786133)
chr6 (96-299)||(14486774-14486976)
chr6 (96-156)||(22544927-22544987)
chr6 (108-155)||(17913462-17913509)
chr6 (96-190)||(12465503-12465597)
chr6 (104-231)||(23089826-23089952)
chr6 (96-189)||(14985488-14985581)
chr6 (153-225)||(14874655-14874727)
chr6 (96-152)||(20109945-20110001)
[»] scaffold0126 (1 HSPs)
scaffold0126 (96-228)||(33993-34125)
[»] chr8 (8 HSPs)
chr8 (104-286)||(15062799-15062981)
chr8 (96-307)||(16216714-16216922)
chr8 (93-156)||(17508650-17508713)
chr8 (198-299)||(24819327-24819428)
chr8 (152-229)||(15662104-15662181)
chr8 (115-165)||(24369923-24369973)
chr8 (123-180)||(38180127-38180184)
chr8 (172-292)||(1686723-1686843)
[»] chr2 (6 HSPs)
chr2 (96-156)||(23153910-23153970)
chr2 (96-156)||(23565167-23565227)
chr2 (96-226)||(39668372-39668500)
chr2 (96-183)||(18118432-18118519)
chr2 (96-231)||(18331450-18331584)
chr2 (261-299)||(18331601-18331639)
[»] scaffold0111 (1 HSPs)
scaffold0111 (96-155)||(31222-31281)
[»] scaffold0086 (1 HSPs)
scaffold0086 (134-224)||(10606-10695)
[»] chr5 (7 HSPs)
chr5 (96-226)||(26058828-26058957)
chr5 (96-226)||(17301356-17301486)
chr5 (96-145)||(23596539-23596588)
chr5 (96-155)||(17363252-17363311)
chr5 (96-226)||(17288480-17288610)
chr5 (96-181)||(30190302-30190387)
chr5 (92-148)||(24193278-24193334)
[»] scaffold1924 (1 HSPs)
scaffold1924 (96-232)||(312-448)
[»] scaffold0417 (1 HSPs)
scaffold0417 (96-309)||(2560-2771)
[»] scaffold0959 (1 HSPs)
scaffold0959 (96-164)||(823-891)
[»] scaffold0123 (1 HSPs)
scaffold0123 (96-183)||(34578-34665)
[»] scaffold0338 (1 HSPs)
scaffold0338 (104-217)||(16870-16982)
[»] scaffold0024 (1 HSPs)
scaffold0024 (96-152)||(100568-100624)
[»] scaffold0001 (1 HSPs)
scaffold0001 (96-187)||(423521-423613)


Alignment Details
Target: chr3 (Bit Score: 234; Significance: 1e-129; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 19 - 307
Target Start/End: Original strand, 21093662 - 21093951
Alignment:
Q  19 attggttgacattgatttatctaaacgtacatttgacaaaattcttttggaacgagaaggttatgctttt-aaagtggaaatagatgaactttgtcaaaa 117  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  21093662 attggttgacattgatttatttaaacgtgcatttgacgaaattcttttggaacgagaaggttatgctttttaaattggaaatagatgaactttgtcaaaa 21093761  T
Q  118 tgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggt 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |    
T  21093762 tgaggttttctgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacaactgattggtgtataatatgttgtt 21093861  T
Q  218 tatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataattgttaatgatga 307  Q
    |||||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21093862 tatcatgatgtggtgatttgttcgttttttatacgatttgtgctttgtgaaacgatgttgcttccttgtggtgataattgttaatgatga 21093951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 92 - 299
Target Start/End: Original strand, 29650460 - 29650666
Alignment:
Q  92 gtggaaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaac 191  Q
    ||||||||| | |||||||| ||||||||||  |||||||| |||||||||||| ||||||  ||  |||||||||||| |||||||||||| ||||||     
T  29650460 gtggaaataaacgaactttggcaaaatgaggaattatgatttgataacttgcaaatggctta-tactcatgataacatgatgaaataagaatgaatcaat 29650558  T
Q  192 gactgattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtga 291  Q
    || |||  | ||||||||||||||| | |||||||||||    |||| | ||| |||||||| |||||||||  ||||| |||||| || ||| ||||||    
T  29650559 gagtgacggatgtataatatgttgggtgtcatgatgtgggtgattgtccgtctattatgtgaattgtgctttaagaaacaatgttgttttcttatggtga 29650658  T
Q  292 taattgtt 299  Q
    ||||||||    
T  29650659 taattgtt 29650666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 274
Target Start/End: Original strand, 30176851 - 30176991
Alignment:
Q  134 gataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatgatgtggtca 233  Q
    |||||||| ||| |||||||| ||| ||||||||||| |||||||||||| ||| || || ||||||||||| |||||||||||||||||| |||||| |    
T  30176851 gataacttacaaatggctttgaataaatgataacatgatgaaataagaatgaattaatgattgattggtgtaaaatatgttggttatcatgttgtggtga 30176950  T
Q  234 tttgttcatcttttatgtgatttgtgctttgtgaaacgatg 274  Q
     |||||| ||||||||| || || || ||| ||||||||||    
T  30176951 attgttcgtcttttatgcgaattatgatttatgaaacgatg 30176991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 10711148 - 10711260
Alignment:
Q  114 aaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgt 213  Q
    ||||||||| |||||||||  ||||||||||||||| ||| ||| |||||||||||| |||||||||||  |||||| |  |||||||||| || |||||    
T  10711148 aaaatgagggtttatgatttaataacttgcaattggttttatattcatgataacatgatgaaataagaaggaatcaatgtttgattggtgtgtactatgt 10711247  T
Q  214 tggttatcatgat 226  Q
    |||||||||||||    
T  10711248 tggttatcatgat 10711260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 96 - 229
Target Start/End: Complemental strand, 14262946 - 14262814
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||||||||||||  |||||||| |||||||| ||| || |||  ||| |||||||| ||| |||||||| ||| ||| || || |    
T  14262946 aaatagacgaactttgtcaaaatgaggaattatgatttgataacttacaaatgactta-tattcatgataatatgatgaaataaaaatgaataaatgatt 14262848  T
Q  196 gattggtgtataatatgttggttatcatgatgtg 229  Q
     || |||||| |||||||||||||||||||||||    
T  14262847 tatgggtgtacaatatgttggttatcatgatgtg 14262814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 14305961 - 14306091
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    |||||||  |||||||||||||| || ||||||||| ||||||||||||| |||||||||| |||| | || ||| || ||||||||| | |||| |  |    
T  14305961 aaatagacaaactttgtcaaaataagattttatgatcggataacttgcaaatggctttgtaaacattagaaaatgatgcaataagaatgattcaatgtgt 14306060  T
Q  196 gattggtgtataatatgttggttatcatgat 226  Q
    | ||||| | |||||||  ||||||||||||    
T  14306061 gtttggtatttaatatgcaggttatcatgat 14306091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 170
Target Start/End: Complemental strand, 8900501 - 8900427
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatg 170  Q
    |||||||  |||||||||||||||||||||| |||| | ||||||||||| ||   |||||| ||||||||||||    
T  8900501 aaatagacaaactttgtcaaaatgaggttttgtgatcgaataacttgcaaatgaacttgtatgcatgataacatg 8900427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 228
Target Start/End: Complemental strand, 19801441 - 19801309
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||| |||||||  |  |||||||| | |||||| ||| || ||||||||  ||||||  ||  |||||||||| | |||||| || |    
T  19801441 aaatagacgaactttggcaaaatgttgaattatgatttgttaacttacaaatgactttgtatttatgatagtataatgaaataagagtgaatcaatgatt 19801342  T
Q  196 gattggtgtataatatgttggttatcatgatgt 228  Q
    |||  ||| ||||||| ||||||||||||||||    
T  19801341 gatatgtgaataatatattggttatcatgatgt 19801309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 1e-38; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 134 - 299
Target Start/End: Original strand, 13908229 - 13908394
Alignment:
Q  134 gataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatgatgtggtca 233  Q
    |||||||| ||| ||  ||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||||||||||||||||| |||| | |    
T  13908229 gataactttcaaatgaatttgtatacatgataacatggtgaaataagaattaatcaatgaatgattggtgtattatatgttggttatcatggtgtgatga 13908328  T
Q  234 tttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataattgtt 299  Q
     || | | |||||||||  |||| |||||||||||||||||||| ||||||  |||||||||||||    
T  13908329 attatgcttcttttatgcaatttttgctttgtgaaacgatgttgtttccttaaggtgataattgtt 13908394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 96 - 296
Target Start/End: Complemental strand, 13933817 - 13933619
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||| ||| ||||||||||||| ||||||||||||| |||||||||| ||||||||| ||| |||||||||||| || | | || |    
T  13933817 aaatagacgaactttgtcgaaa-gaggttttatgatcggataacttgcaaatggctttgtaaacatgataatatgatgaaataagaatgaaaccatgatt 13933719  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataat 295  Q
    | | ||||| | |||||| ||||||||||||||| |  |||| || ||||||||| |  ||||||||||||||||||||||| |||| |||| |||||||    
T  13933718 gttgggtgtttgatatgtcggttatcatgatgtgattgtttg-tcgtcttttatgcggattgtgctttgtgaaacgatgttgtttccctgtgatgataat 13933620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 97 - 225
Target Start/End: Complemental strand, 20847949 - 20847821
Alignment:
Q  97 aatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactg 196  Q
    |||||| ||||||| ||||||| ||||||||||||  |||||||||||| |||||||||| |||||||||||||||||||| ||||  |||||| || ||    
T  20847949 aatagacgaactttatcaaaataaggttttatgatcagataacttgcaaatggctttgtaaacatgataacatggtgaaatgagaagtaatcaatgattg 20847850  T
Q  197 attggtgtataatatgttggttatcatga 225  Q
    |||||||| |||||| |||||||||||||    
T  20847849 attggtgtttaatatattggttatcatga 20847821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 105 - 293
Target Start/End: Original strand, 1919561 - 1919753
Alignment:
Q  105 aactttgtcaaaatgaggttttatgattggataacttgcaattggctt---tgtatacatgataacatggtgaaataagaataaatcaacgactgattgg 201  Q
    |||||||||||||||| |||||||||| ||||||||||||| ||||||   | ||||||||||||| |||||| |||||||  |||||| || ||||||     
T  1919561 aactttgtcaaaatgaagttttatgatcggataacttgcaaatggcttgtatatatacatgataacgtggtgagataagaaggaatcaatgattgattgt 1919660  T
Q  202 tgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacg-atgttgcttccttgtggtgata 293  Q
      | |||| |||||||||||||||||| || | ||||   ||||||||| |||||| | |||||||||||  ||||| |||||||||||||||    
T  1919661 catgtaatgtgttggttatcatgatgttgtgaattgtctgtcttttatgcgatttgagttttgtgaaacgtttgttgtttccttgtggtgata 1919753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 96 - 292
Target Start/End: Original strand, 19033311 - 19033510
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||||  ||||| |||  || ||||| ||||||||| ||||| | ||| || |||||||  ||| ||||||| |||| || ||| || |    
T  19033311 aaatagacgaactttggtaaaataaggaattttgatttgataacttgtaattgaccttgcattcatgatagaatgatgaaatatgaatgaaacaatgatt 19033410  T
Q  196 gattggtgtataatatgttggttatcatgatgtg-gtcat--ttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgat 292  Q
    ||||| ||||||||| ||| |||||||||||||| || ||  |||||| ||| |||||||| ||||||||  ||||||||||||| ||| ||||||||||    
T  19033411 gattgatgtataataggtttgttatcatgatgtgagtgattgttgttcgtctattatgtgaattgtgcttcatgaaacgatgttgtttctttgtggtgat 19033510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 9198185 - 9198117
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgat 164  Q
    |||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||| ||| ||||||    
T  9198185 aaatagatgaactttgttgaaatgaggttttatgatcggataacttgcaattggctttatattcatgat 9198117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 96 - 298
Target Start/End: Original strand, 11923212 - 11923412
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||||||| ||| |||||||||| |   |||| || ||| |||||||||| ||||| |||||||||||||||||||| ||  || |  |    
T  11923212 aaatagacgaactttgtcagaataaggttttatgctcatataattt-caaatggctttgtaaacatggtaacatggtgaaataagaatgaaataatgttt 11923310  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataat 295  Q
    | | ||||| | ||||||||| ||||||||||||||  | || ||||||||||||||  |||||| || ||| || |||||  || ||||||| ||||||    
T  11923311 gttgggtgtttgatatgttggctatcatgatgtggttgtctg-tcatcttttatgtggattgtgccttttgagacaatgttatttacttgtggcgataat 11923409  T
Q  296 tgt 298  Q
    |||    
T  11923410 tgt 11923412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 231
Target Start/End: Original strand, 16028433 - 16028561
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacg-actgattggt 202  Q
    ||||||||||||||| ||||||| ||||   ||||||||||| ||||||||||| |||| ||| ||| |||||||||||  ||||   |   |||| |||    
T  16028433 gaactttgtcaaaataaggttttttgatcaaataacttgcaaatggctttgtattcatgttaatatgatgaaataagaaagaatccttgtgttgatgggt 16028532  T
Q  203 gtataatatgttggttatcatgatgtggt 231  Q
    |||||||| ||||||||||||||||||||    
T  16028533 gtataataagttggttatcatgatgtggt 16028561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 10115465 - 10115535
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataa 166  Q
    ||||| |||||||||||||||||||| ||||||||| |||||||| |||| ||||||||||| || |||||    
T  10115465 aaatatatgaactttgtcaaaatgagattttatgatcggataactcgcaaatggctttgtattcacgataa 10115535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 16672502 - 16672607
Alignment:
Q  126 tatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatga 225  Q
    ||||||| |||||||||||| || |||||||| | |||||| ||| |||||||||||| ||||||    |||| | || | |||||||||||||||||||    
T  16672502 tatgatttgataacttgcaaatgactttgtattcgtgataatatgatgaaataagaatgaatcaattgttgatggatgaaaaatatgttggttatcatga 16672601  T
Q  226 tgtggt 231  Q
    ||||||    
T  16672602 tgtggt 16672607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 17542612 - 17542748
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||  ||||||| | |||||||||| ||||||||||||| |||||||||  | |||||||| |  ||||||| |||| || ||| |  |    
T  17542612 aaatagacgaacttgctcaaaataaagttttatgatcggataacttgcaaatggctttgtgaatatgataacttaatgaaatatgaatgaaccaatgttt 17542711  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtc 232  Q
    | | | ||| ||||| |||||||||||||||||||||    
T  17542712 gttggatgtttaataggttggttatcatgatgtggtc 17542748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 9251764 - 9251696
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgat 164  Q
    ||||||| |||||||||  ||||||||||||||||  |||||||||||||||| |||| ||| ||||||    
T  9251764 aaatagacgaactttgttgaaatgaggttttatgaccggataacttgcaattgactttatattcatgat 9251696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 190
Target Start/End: Original strand, 12407439 - 12407493
Alignment:
Q  136 taacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaa 190  Q
    ||||| |||| |||||||||| |||||||||||| ||||||||||||| ||||||    
T  12407439 taactagcaaatggctttgtaaacatgataacatagtgaaataagaatgaatcaa 12407493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 9269551 - 9269483
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgat 164  Q
    ||||||| |||||||||  ||||||||||||||||  | |||||||||||||| |||| ||| ||||||    
T  9269551 aaatagacgaactttgttgaaatgaggttttatgaccgaataacttgcaattgactttatattcatgat 9269483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 12451675 - 12451768
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaa 190  Q
    |||||||  ||||||||||||||| | ||||||||  ||||||||||||||||| ||| | | |||||||| ||| |  ||||||||| ||||||    
T  12451675 aaatagacaaactttgtcaaaatgtgattttatgagcggataacttgcaattgg-tttatgttcatgataatatgatagaataagaatgaatcaa 12451768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 96 - 308
Target Start/End: Complemental strand, 3758 - 3548
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||| |||||||||||||| |||| | |||||||||||| ||| || |||| |||||||| ||| |||||||||||| |||||| || |    
T  3758 aaatagacgaactttatcaaaatgaggttt-atgacttgataacttgcaaatgggtt-gtattcatgataatatgatgaaataagaatgaatcaatgatt 3661  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataat 295  Q
    ||| |||||||||||||||| ||||||||||||||||  ||||   ||| |||||  | |||||| || |||||| |||||| |||||||||||||||||    
T  3660 gatgggtgtataatatgttgtttatcatgatgtggtcgattgtatgtctattatgcaaattgtgccttatgaaacaatgttgtttccttgtggtgataat 3561  T
Q  296 tgttaatgatgat 308  Q
    || | ||||||||    
T  3560 tgatgatgatgat 3548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 6e-37; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 96 - 293
Target Start/End: Original strand, 17492375 - 17492572
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||||||||||  ||||||||| ||||||||||||| |||||| |||||||||||||| |||||| |||||||  |||||| || |    
T  17492375 aaatagacgaactttgtcaaaatgaaattttatgatcggataacttgcaaatggctt-gtatacatgataacgtggtgagataagaaggaatcaatgatt 17492473  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacga-tgttgcttccttgtggtgata 293  Q
    |||||   | |||| |||||||||||||||||| || | ||||   ||||||||| |||||| | |||||||||||| ||||| |||||||||||||||    
T  17492474 gattgtcatgtaatgtgttggttatcatgatgttgtgaattgtctgtcttttatgcgatttgagttttgtgaaacgattgttgtttccttgtggtgata 17492572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 96 - 293
Target Start/End: Complemental strand, 17560839 - 17560642
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||||||||||  ||||||||| ||||||||||||| |||||| |||||||||||||| |||||| |||||||  |||||| || |    
T  17560839 aaatagacgaactttgtcaaaatgaaattttatgatcggataacttgcaaatggctt-gtatacatgataacgtggtgagataagaaggaatcaatgatt 17560741  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacga-tgttgcttccttgtggtgata 293  Q
    |||||   | |||| |||||||||||||||||| || | ||||   ||||||||| |||||| | |||||||||||| ||||| |||||||||||||||    
T  17560740 gattgtcatgtaatgtgttggttatcatgatgttgtgaattgtctgtcttttatgcgatttgagttttgtgaaacgattgttgtttccttgtggtgata 17560642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 299
Target Start/End: Complemental strand, 4549099 - 4548905
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtg 203  Q
    |||||||| |||||||||| | ||  ||||||||||| |||| ||| ||| ||| || ||| | ||| |||||||||||| |||||| ||  |||  |||    
T  4549099 gaactttggcaaaatgaggatgtagtattggataactcgcaaatggttttatattcaagatcatatgatgaaataagaatgaatcaatgatggatgagtg 4549000  T
Q  204 tataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataattgtt 299  Q
    || |||||||||||||||||| ||||||   |||||| ||| |||||| | ||||||||| ||| ||||||||  |||| ||||||||||||||||    
T  4548999 taaaatatgttggttatcatgttgtggttgattgttcgtctattatgttaattgtgctttatgagacgatgtt-attccgtgtggtgataattgtt 4548905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 8251074 - 8250939
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    |||||||  ||||||||||||||||| ||||||| |   |||||||| || |||||||||| ||||||||||||||| || ||||||| |||||| |  |    
T  8251074 aaatagacaaactttgtcaaaatgagcttttatggtcacataacttgtaaatggctttgtaaacatgataacatggtaaattaagaatgaatcaatgttt 8250975  T
Q  196 gattggtgtataatatgttggttatcatgatgtggt 231  Q
    ||||||||||| | ||| |   ||||||||||||||    
T  8250974 gattggtgtattaaatggtttctatcatgatgtggt 8250939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 16175511 - 16175376
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||| ||| ||||||||| |||||||||   ||||| || || || ||||||| ||||||||||||||| |  ||||||| |||||| |  |    
T  16175511 aaatagacgaacgttgccaaaatgagcttttatgatcctataacatgtaaatgactttgtaaacatgataacatggtaacttaagaatgaatcaatgttt 16175412  T
Q  196 gattggtgtataatatgttggttatcatgatgtggt 231  Q
    ||||||||||| | ||||| | ||||||||||||||    
T  16175411 gattggtgtattaaatgtttgctatcatgatgtggt 16175376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 206 - 305
Target Start/End: Original strand, 17998949 - 17999047
Alignment:
Q  206 taatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataattgttaatgat 305  Q
    |||||||||||||| |||||||||||   ||| || |||| ||||| | ||||| |||| ||||||||||||| |||||||||||||||||||| |||||    
T  17998949 taatatgttggttagcatgatgtggttgattgctcgtcttctatgtaaattgtgttttgagaaacgatgttgc-tccttgtggtgataattgttgatgat 17999047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 14266883 - 14267013
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||||||||||| |||||||||   ||| ||||  ||||| ||| ||| |||||||| ||| | ||||| |||| |||||| |       
T  14266883 aaatagacgaactttgtcaaaatgagcttttatgatcttataccttgtgattggttttttattcatgataatatgataaaatacgaatgaatcaatgttg 14266982  T
Q  196 gattggtgtataatatgttggttatcatgat 226  Q
    ||||||||| |||||| ||||||||||||||    
T  14266983 gattggtgtgtaatatattggttatcatgat 14267013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 26427632 - 26427510
Alignment:
Q  135 ataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatgatgtggtcat 234  Q
    ||||||||||| || ||||| || |||||||| ||||||||||||| || |||||| |  ||||||||| || | ||||| |||||||||||||||| |     
T  26427632 ataacttgcaaatgactttgaattcatgataatatggtgaaataaggatgaatcaatgtttgattggtgaattaaatgtttgttatcatgatgtggtgaa 26427533  T
Q  235 ttgttcatcttttatgtgatttg 257  Q
     | ||| | ||||||||||||||    
T  26427532 atattcgtattttatgtgatttg 26427510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 6461014 - 6461067
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtat 157  Q
    |||||||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  6461014 gaactttgtcaaaatgaggttttatggtcggataacttgcaaatggctttgtat 6461067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 13488393 - 13488333
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgta 156  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||| || |||||||    
T  13488393 aaatagacgaactttgtcaaaatgaggttctatgatcggataacttgcaaatgactttgta 13488333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 9e-33; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 96 - 255
Target Start/End: Original strand, 21746616 - 21746775
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||||| ||| ||| |||||| || |    
T  21746616 aaatagacgaacttagtcaaaatgaggttttatgatcggataacttgcaaatggttttgtgtacatgataacatggtgaattaaaaatgaatcaatgatt 21746715  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatt 255  Q
      || |||||||||||||  |||||||||||||||  | || ||| ||| ||||||||||    
T  21746716 ttttagtgtataatatgtctgttatcatgatgtggcgaattattcgtctattatgtgatt 21746775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 104 - 308
Target Start/End: Original strand, 13121928 - 13122132
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtg 203  Q
    ||||||||||||||||||    ||||||| |||||||||||| || |||||||| |||||||| ||| |||||||||||| |||  | |  |||| ||||    
T  13121928 gaactttgtcaaaatgagaaactatgatttgataacttgcaaatgactttgtattcatgataatatgatgaaataagaatgaattgatggttgatgggtg 13122027  T
Q  204 tataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataattgttaatg 303  Q
    |||| |||||||||| ||||||| |||    |||| | ||| |||||||| |||||||||||| |||||||||| ||||||| |||| ||||||||  ||    
T  13122028 tatattatgttggttctcatgatatggatgattgtccgtctattatgtgacttgtgctttgtggaacgatgttgtttccttgaggtgctaattgttggtg 13122127  T
Q  304 atgat 308  Q
    |||||    
T  13122128 atgat 13122132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 138 - 290
Target Start/End: Complemental strand, 22457442 - 22457291
Alignment:
Q  138 acttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatgatgtggtcatttg 237  Q
    ||||||||||||| |||||| |||||||| ||| |||||||||||| |||||| || | ||| ||||||||||||||||||||||||||||| |   ||     
T  22457442 acttgcaattggccttgtattcatgataatatgatgaaataagaatgaatcaatgatttattagtgtataatatgttggttatcatgatgtgattgatt- 22457344  T
Q  238 ttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtg 290  Q
    ||| ||| ||||| || ||||||||||||||||||| ||| ||||||||||||    
T  22457343 ttcgtctattatgcgaattgtgctttgtgaaacgatattgtttccttgtggtg 22457291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 96 - 228
Target Start/End: Original strand, 22786002 - 22786133
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||| |||||||||||| ||| |||| ||||||||||||||| || | ||||||||||||||||| |||||||||||| |||||| || |    
T  22786002 aaatagacgaacttcgtcaaaatgagggttt-tgatcggataacttgcaattagcatcgtatacatgataacatgatgaaataagaatgaatcaatgaat 22786100  T
Q  196 gattggtgtataatatgttggttatcatgatgt 228  Q
    ||| |||||||||||| |||| |||| ||||||    
T  22786101 gatgggtgtataatattttggatatcctgatgt 22786133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 299
Target Start/End: Original strand, 14486774 - 14486976
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||||||||||||| | |||||| ||| ||||||||||| ||| ||||||| |||||||  ||| |||||||||| | |||||| || |    
T  14486774 aaatagacgaactttgtcaaaatgaaggtttatggttgaataacttgcaaatggttttgtattcatgatagtatgatgaaataagagttaatcaatga-t 14486872  T
Q  196 gattg-gtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataa 294  Q
    ||||| |||| |||||||||| |||| || |||||||   || | | ||| ||||||||  ||||||||||||||| |||||| || |||  ||||||||    
T  14486873 gattgagtgtttaatatgttgtttatgattatgtggttgattttccgtctattatgtgaaatgtgctttgtgaaacaatgttg-tttctttaggtgataa 14486971  T
Q  295 ttgtt 299  Q
    |||||    
T  14486972 ttgtt 14486976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 156
Target Start/End: Complemental strand, 22544987 - 22544927
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgta 156  Q
    ||||||||||||||||||||  | |||||||||||| ||||||||||||| || |||||||    
T  22544987 aaatagatgaactttgtcaaggtaaggttttatgatcggataacttgcaaatgtctttgta 22544927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 155
Target Start/End: Complemental strand, 17913509 - 17913462
Alignment:
Q  108 tttgtcaaaatgaggttttatgattggataacttgcaattggctttgt 155  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||    
T  17913509 tttgtcaaaatgaggttttatgatcgaataacttgcaattggatttgt 17913462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 190
Target Start/End: Original strand, 12465503 - 12465597
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaa 190  Q
    ||||||| ||||||||||||||||| |||||||| | | |||||||| |||||  ||||||| |||||| | ||| |  ||||||||| ||||||    
T  12465503 aaatagacgaactttgtcaaaatgatgttttatggtcgaataacttgtaattgattttgtattcatgatgatatgatagaataagaatgaatcaa 12465597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 231
Target Start/End: Original strand, 23089826 - 23089952
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtg 203  Q
    |||||| ||||||||||||||| ||||||| ||||||||||| || |||||||  ||| |||| ||| |  ||||||||| |||||| ||  | | ||||    
T  23089826 gaacttggtcaaaatgaggttt-atgattgtataacttgcaaatgactttgtaatcataataatatgatagaataagaatgaatcaatgatggttgggtg 23089924  T
Q  204 tataatatgttggttatcatgatgtggt 231  Q
    | ||||||| ||  | ||||||||||||    
T  23089925 tttaatatgatgaatgtcatgatgtggt 23089952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 189
Target Start/End: Complemental strand, 14985581 - 14985488
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatca 189  Q
    ||||||||||||||||| |||||  | ||| ||||  | ||||||||||||||| ||| | | |||||| | ||||| |||||||||| |||||    
T  14985581 aaatagatgaactttgttaaaatatgatttcatgaccgaataacttgcaattggttttatcttcatgatgatatggtaaaataagaatgaatca 14985488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 14874655 - 14874727
Alignment:
Q  153 tgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatga 225  Q
    ||||| |||||||| ||| |||||||||||| |||||| |   | ||||||||| |||||||||| |||||||    
T  14874655 tgtattcatgataatatgatgaaataagaatgaatcaatgttggtttggtgtatcatatgttggtgatcatga 14874727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 20110001 - 20109945
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctt 152  Q
    ||||||||||||||||| |||||  ||||| ||||  ||||||||||||||| ||||    
T  20110001 aaatagatgaactttgttaaaatctggtttcatgaccggataacttgcaattagctt 20109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 96 - 228
Target Start/End: Original strand, 33993 - 34125
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||||||||||||||||||| |   ||||||||   ||||||||||  || ||||||| |||||||||||||||||||||||||  |||||| || |    
T  33993 aaatagatgaactttgtcaaaataaatctttatgatcttataacttgcacatgactttgtaaacatgataacatggtgaaataagaagtaatcaatgatt 34092  T
Q  196 gattggtgtataatatgttggttatcatgatgt 228  Q
    ||||| ||| |||||| | ||||||||||||||    
T  34093 gattgatgtttaatatataggttatcatgatgt 34125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 104 - 286
Target Start/End: Complemental strand, 15062981 - 15062799
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattg-gt 202  Q
    ||||||||  |||||||  | |||||||  ||||||||| || || |||| ||| |||||||| ||  |||||||||||| |||||| || ||| || ||    
T  15062981 gaactttggtaaaatgatatattatgatgtgataacttgtaaatgactttatattcatgataatattatgaaataagaatgaatcaatga-tgagtgagt 15062883  T
Q  203 gtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgt 286  Q
    ||||||||||||||||||||||||| |   | |||||| ||| |||||||| ||||||||||||||| ||||||| ||||||||    
T  15062882 gtataatatgttggttatcatgatgcgtgtaattgttcgtctattatgtgaattgtgctttgtgaaatgatgttgtttccttgt 15062799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 96 - 307
Target Start/End: Complemental strand, 16216922 - 16216714
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||||| ||||| | |||||| |||   |||||||||| ||| |||||||| |||||||| ||| |||||||||||| |||||| |  |    
T  16216922 aaatagacgaactttgtaaaaattaagttttacgatcaaataacttgcagttgactttgtatccatgataatatgatgaaataagaattaatcaatgttt 16216823  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataat 295  Q
    |||||||||||||||||||| ||| |||||| ||||   ||| || ||| || ||  | ||||||||||||||| ||| ||| ||||||||||||||||     
T  16216822 gattggtgtataatatgttgtttaccatgat-tggtggattg-tcgtctgtt-tgcaaattgtgctttgtgaaatgatattgtttccttgtggtgataaa 16216726  T
Q  296 tgttaatgatga 307  Q
    | || |||||||    
T  16216725 tattgatgatga 16216714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 17508713 - 17508650
Alignment:
Q  93 tggaaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgta 156  Q
    |||||||||| |||||||||  ||||||||||||||||| ||||||||||||||||||||||||    
T  17508713 tggaaatagacgaactttgttgaaatgaggttttatgatcggataacttgcaattggctttgta 17508650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 24819327 - 24819428
Alignment:
Q  198 ttggtgtataatatgttggttatcatgatgtg-gtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataatt 296  Q
    |||||||||||||||||||| ||| ||||||| || ||| |||| ||| ||| |||  ||||||||| |||||| |||||| ||||||||||||||||||    
T  24819327 ttggtgtataatatgttggtcatcgtgatgtgagtgatt-gttcgtctattacgtggattgtgctttatgaaacaatgttgtttccttgtggtgataatt 24819425  T
Q  297 gtt 299  Q
    |||    
T  24819426 gtt 24819428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 152 - 229
Target Start/End: Original strand, 15662104 - 15662181
Alignment:
Q  152 ttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatgatgtg 229  Q
    |||||| |||||||  ||| |||||||||||| |||||| || | |||| ||||||||||||||||||||||||||||    
T  15662104 ttgtattcatgatagaatgatgaaataagaatgaatcaatgatttattgatgtataatatgttggttatcatgatgtg 15662181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 165
Target Start/End: Complemental strand, 24369973 - 24369923
Alignment:
Q  115 aaatgaggttttatgattggataacttgcaattggctttgtatacatgata 165  Q
    ||||||||||||||||| |||||| ||| || |||||||||||||||||||    
T  24369973 aaatgaggttttatgatcggataatttgtaaatggctttgtatacatgata 24369923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 180
Target Start/End: Complemental strand, 38180184 - 38180127
Alignment:
Q  123 ttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataag 180  Q
    ||||||||| |||||||||||||  | ||||| | |||||||||||||||||||||||    
T  38180184 ttttatgatcggataacttgcaaaagactttgaaaacatgataacatggtgaaataag 38180127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 292
Target Start/End: Original strand, 1686723 - 1686843
Alignment:
Q  172 tgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacg 271  Q
    |||||||||||| |||||  |  |||| |||||||  | |||||||||||||||||||  |  ||||| |||| ||||| || ||||| | | ||||| |    
T  1686723 tgaaataagaatgaatcagtgcttgatgggtgtatgttgtgttggttatcatgatgtgaacgattgttaatctattatgagaattgtgatgtatgaaatg 1686822  T
Q  272 atgttgcttccttgtggtgat 292  Q
    |||||| ||| ||||||||||    
T  1686823 atgttgtttctttgtggtgat 1686843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 6)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 23153910 - 23153970
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgta 156  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  23153910 aaatagacgaactttatcaaaatgaggttttatgatcggataacttgcaaatggctttgta 23153970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 96 - 156
Target Start/End: Original strand, 23565167 - 23565227
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgta 156  Q
    ||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||    
T  23565167 aaatagacgaactttatcaaaatgaggttttatgatcggataacttgcaaatggctttgta 23565227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 39668372 - 39668500
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    |||||||| |||||| ||||||| |||||||| ||| | |||||| |||| ||| ||||||| |||||| ||||| |||||||||||| ||||||    |    
T  39668372 aaatagattaacttt-tcaaaatcaggttttaagatcgaataactagcaaatggttttgtattcatgattacatgatgaaataagaatgaatcaagattt 39668470  T
Q  196 gattggtgtataatatgttggttatcatgat 226  Q
    |||||||||||||| |  |||||||||||||    
T  39668471 gattggtgtataatgt-atggttatcatgat 39668500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 18118519 - 18118432
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaat 183  Q
    ||||||| |||||| ||||||||| ||||||||||| | || |||||||| || ||||||  ||| ||||||||| ||||||||||||    
T  18118519 aaatagacgaacttggtcaaaatggggttttatgatcgaatgacttgcaaatgactttgtgaacaggataacatgatgaaataagaat 18118432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 18331450 - 18331584
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||  |||||||||||||||||||| | ||||||||||| | | ||||||| | ||  |||||| | |||||||||| || ||| |  |    
T  18331450 aaatagacgaacttgttcaaaatgaggttttatgatcgaataacttgcaaat-gatttgtattcttgggaacatgataaaataagaatgaaacaatggtt 18331548  T
Q  196 gattggtgtataatatgttggttatcatgatgtggt 231  Q
    | | ||||| | ||||||||||||||||||||||||    
T  18331549 gttgggtgtttgatatgttggttatcatgatgtggt 18331584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Original strand, 18331601 - 18331639
Alignment:
Q  261 tttgtgaaacgatgttgcttccttgtggtgataattgtt 299  Q
    ||||||||||||||||| ||||||||||||| |||||||    
T  18331601 tttgtgaaacgatgttgtttccttgtggtgaaaattgtt 18331639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 96 - 155
Target Start/End: Original strand, 31222 - 31281
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgt 155  Q
    |||||||||||||||||  |||||||||||||| | ||||||||||||||||||||||||    
T  31222 aaatagatgaactttgttgaaatgaggttttataactggataacttgcaattggctttgt 31281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 224
Target Start/End: Original strand, 10606 - 10695
Alignment:
Q  134 gataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtgtataatatgttggttatcatg 224  Q
    |||||||||||| |||||||||| |||||||||||| ||||||||||||  |||||| || || ||||||| |||| | ||||||||||||    
T  10606 gataacttgcaaatggctttgtaaacatgataacatagtgaaataagaaggaatcaatgattg-ttggtgtgtaatgtattggttatcatg 10695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 226
Target Start/End: Complemental strand, 26058957 - 26058828
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||||  ||||||||| || |||||| ||||||||| || || |||  ||| |||||||| ||| ||||||||||||||||||  || |    
T  26058957 aaatagacgaactttggtaaaatgaggattcatgatttgataacttgaaaatgactta-tattcatgataatatgatgaaataagaataaatcattgatt 26058859  T
Q  196 gattggtgtataatatgttggttatcatgat 226  Q
    ||| ||  || ||||||||||||||||||||    
T  26058858 gatgggcataaaatatgttggttatcatgat 26058828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 17301356 - 17301486
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||| |||||||   |||| | | |||||||||||| ||||||||||  |||||||| |||  |||||||| || ||| || |  |    
T  17301356 aaatagacgaactttgtctaaatgagaaattataacttgataacttgcaaatggctttgtactcatgataatatgaggaaataaggatgaataaatgttt 17301455  T
Q  196 gattggtgtataatatgttggttatcatgat 226  Q
    ||||| |||||| ||||| ||||||||||||    
T  17301456 gattgttgtatattatgtgggttatcatgat 17301486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 23596539 - 23596588
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaa 145  Q
    |||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  23596539 aaatagatgaactttgtcaaaatgagttttaatgatcggataacttgcaa 23596588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 155
Target Start/End: Complemental strand, 17363311 - 17363252
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgt 155  Q
    ||||||| ||||||||| |||||| ||||| ||||  |||||||||||||||||||||||    
T  17363311 aaatagacgaactttgttaaaatgtggtttcatgaccggataacttgcaattggctttgt 17363252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 96 - 226
Target Start/End: Original strand, 17288480 - 17288610
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||| |||||||   |||||| | |||||||||||| || |||||||  |||||||| ||   |||||||| || ||| || |  |    
T  17288480 aaatagacgaactttgtctaaatgagaaattatgacttgataacttgcaaatgactttgtactcatgataatataaggaaataaggatgaataaatgttt 17288579  T
Q  196 gattggtgtataatatgttggttatcatgat 226  Q
    ||||| |||||| ||||| ||||||||||||    
T  17288580 gattgttgtatattatgtaggttatcatgat 17288610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 181
Target Start/End: Original strand, 30190302 - 30190387
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataaga 181  Q
    ||||||| |||||| ||||||||| |||||||||||  |||||||||||| |  ||||||  ||||||||||  | ||||||||||    
T  30190302 aaatagacgaacttcgtcaaaatggggttttatgatcagataacttgcaaattactttgtgaacatgataaccagatgaaataaga 30190387  T

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Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 24193334 - 24193278
Alignment:
Q  92 gtggaaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattg 148  Q
    ||||||||||| ||||||||| |||||| | ||| ||||  ||||||||||||||||    
T  24193334 gtggaaatagacgaactttgttaaaatgtgatttcatgaccggataacttgcaattg 24193278  T

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Target: scaffold1924 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold1924
Description:

Target: scaffold1924; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 96 - 232
Target Start/End: Original strand, 312 - 448
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| |||||||||||||||||||||||||||| | |||||||||||  | |||| |  ||||||||||||| ||||  |||||| |  ||  |  |    
T  312 aaatagacgaactttgtcaaaatgaggttttatgatcgaataacttgcaaacgactttatgaacatgataacatgatgaagcaagaatgagccactgttt 411  T
Q  196 gattggtgtataatatgttggttatcatgatgtggtc 232  Q
    | | | ||| ||||| |||||||||||||||||||||    
T  412 gttggatgtttaataggttggttatcatgatgtggtc 448  T

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Target: scaffold0417 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 96 - 309
Target Start/End: Complemental strand, 2771 - 2560
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgact 195  Q
    ||||||| ||||||||||||| ||||||| |||| | | |||||||  |||||||||||||| |||||| | ||| | | |||||||| |||||| || |    
T  2771 aaatagacgaactttgtcaaattgaggttgtatgttcgaataacttttaattggctttgtattcatgatgatatgat-agataagaatgaatcaatga-t 2674  T
Q  196 ga-ttggtgtataatatgttggttatcatgatgtggtcatttgttcatcttttatgtgatttgtgctttgtgaaacgatgttgcttccttgtggtgataa 294  Q
    || ||||||| ||||||| ||  | |||||||||||| |  ||||| | ||||||||||  ||||  | |||||||  | ||| ||||||| |||||||     
T  2673 gatttggtgtttaatatgatgaatgtcatgatgtggttagatgttcgtattttatgtgaaatgtg-atcgtgaaactttattgtttccttgaggtgatag 2575  T
Q  295 ttgttaatgatgatg 309  Q
    |||||||| ||||||    
T  2574 ttgttaataatgatg 2560  T

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Target: scaffold0959 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0959
Description:

Target: scaffold0959; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 96 - 164
Target Start/End: Complemental strand, 891 - 823
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgat 164  Q
    ||||||| |||||||||  ||||||| ||||||||  ||||||||||||||||||||| ||| ||||||    
T  891 aaatagacgaactttgttgaaatgagattttatgaccggataacttgcaattggctttatattcatgat 823  T

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Target: scaffold0123 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 34665 - 34578
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaat 183  Q
    ||||||| ||| |||||||||||||| |||  |||| ||||||||||||| ||| |||| | ||||||||| ||| |||| |||||||    
T  34665 aaatagacgaattttgtcaaaatgagttttcttgatcggataacttgcaaatggttttggaaacatgataatatgatgaattaagaat 34578  T

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Target: scaffold0338 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 104 - 217
Target Start/End: Original strand, 16870 - 16982
Alignment:
Q  104 gaactttgtcaaaatgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaatcaacgactgattggtg 203  Q
    ||||||||  |||||||||  |||||||| ||||||||||||||| | || ||| |||||||| || ||||||||||||| ||||   || ||||  |||    
T  16870 gaactttgggaaaatgaggaattatgatttgataacttgcaattgac-ttctattcatgataatatagtgaaataagaatgaatctttgattgatgagtg 16968  T
Q  204 tataatatgttggt 217  Q
    || |||||||||||    
T  16969 taaaatatgttggt 16982  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 100568 - 100624
Alignment:
Q  96 aaatagatgaactttgtcaaaatgaggttttatgattggataacttgcaattggctt 152  Q
    ||||||| ||||||||| |||| | ||||| |||||||||||||||| |||| ||||    
T  100568 aaatagacgaactttgttaaaaagtggtttcatgattggataacttgtaattagctt 100624  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 187
Target Start/End: Complemental strand, 423613 - 423521
Alignment:
Q  96 aaatagatgaactttgtcaaaa-tgaggttttatgattggataacttgcaattggctttgtatacatgataacatggtgaaataagaataaat 187  Q
    |||||||| ||||||| ||||| |||||   ||||| | |||||||||||| || |||||||| | |||||| ||| |||||| |||||||||    
T  423613 aaatagataaactttggcaaaaatgaggaactatgagttgataacttgcaaatgactttgtattcttgataatatgatgaaatgagaataaat 423521  T

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