View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13386_high_34 (Length: 226)
Name: NF13386_high_34
Description: NF13386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13386_high_34 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 156; Significance: 5e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 6 - 226
Target Start/End: Original strand, 7430179 - 7430397
Alignment:
| Q |
6 |
aatacatctttgatgagaagtgtgtacatgctaaataaacaaactattgaaaggnnnnnnnnn--cgaaaatggaaacatttttctatcattttctcagc |
103 |
Q |
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| T |
7430179 |
aatacatctttgatcagaagtgtgtacatgctaaataaac----tattgaaaggaaaaaaaaaaacgaaaatggaaacatttttctatcattttctcagc |
7430274 |
T |
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| Q |
104 |
aacgaaacggagaagaaacgttacctgaggaacgagcataacaccaacggtgattccagccataagatcaccctgaagatactcacgccatttatatatc |
203 |
Q |
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| T |
7430275 |
aacgaaacggagaagaagcgttacctgaggaacgagcataacaccaacggtgattccagccataagatcaacctgaagatactcacgccatttatatatc |
7430374 |
T |
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| Q |
204 |
cgaatccaacgataacaaggaat |
226 |
Q |
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| T |
7430375 |
cgaatccaacgataacaaggaat |
7430397 |
T |
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