View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13386_low_1 (Length: 825)

Name: NF13386_low_1
Description: NF13386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13386_low_1
NF13386_low_1
[»] chr6 (32 HSPs)
chr6 (119-515)||(10089534-10089930)
chr6 (607-814)||(27381252-27381459)
chr6 (607-814)||(27471635-27471842)
chr6 (609-814)||(17684469-17684674)
chr6 (607-814)||(29308890-29309097)
chr6 (607-814)||(29315850-29316057)
chr6 (609-814)||(16566320-16566525)
chr6 (607-814)||(17691440-17691647)
chr6 (609-814)||(188977-189182)
chr6 (609-814)||(25537159-25537364)
chr6 (609-814)||(11651725-11651930)
chr6 (609-814)||(13359269-13359474)
chr6 (646-814)||(20553587-20553755)
chr6 (190-276)||(10101523-10101607)
chr6 (645-814)||(17850495-17850663)
chr6 (190-254)||(10102955-10103019)
chr6 (630-814)||(27925772-27925961)
chr6 (626-799)||(8509941-8510115)
chr6 (18-68)||(10089954-10090004)
chr6 (517-571)||(17691683-17691737)
chr6 (515-571)||(27381495-27381551)
chr6 (515-571)||(27471878-27471934)
chr6 (515-571)||(29308798-29308854)
chr6 (515-571)||(29315758-29315814)
chr6 (515-571)||(17684712-17684768)
chr6 (614-669)||(31258065-31258120)
chr6 (515-569)||(11651630-11651684)
chr6 (645-813)||(20736604-20736773)
chr6 (515-571)||(25537405-25537461)
chr6 (529-571)||(13359512-13359554)
chr6 (513-571)||(16394484-16394542)
chr6 (623-688)||(22259925-22259990)
[»] chr3 (48 HSPs)
chr3 (607-814)||(6110064-6110271)
chr3 (607-814)||(10572592-10572799)
chr3 (607-814)||(15600884-15601091)
chr3 (607-814)||(15607429-15607636)
chr3 (610-814)||(13211305-13211509)
chr3 (607-814)||(13248607-13248814)
chr3 (609-814)||(16482483-16482688)
chr3 (613-814)||(17781118-17781319)
chr3 (613-814)||(10579355-10579556)
chr3 (609-814)||(18522665-18522870)
chr3 (607-814)||(15357586-15357793)
chr3 (607-814)||(8490488-8490702)
chr3 (609-814)||(18519980-18520182)
chr3 (613-814)||(19089745-19089946)
chr3 (609-814)||(17200184-17200389)
chr3 (626-814)||(15342219-15342407)
chr3 (609-814)||(13516813-13517018)
chr3 (607-768)||(18640792-18640953)
chr3 (613-814)||(32056900-32057101)
chr3 (613-814)||(1647521-1647726)
chr3 (609-795)||(16200128-16200313)
chr3 (607-799)||(29924971-29925163)
chr3 (607-799)||(29974124-29974316)
chr3 (609-795)||(16200434-16200619)
chr3 (614-814)||(24253388-24253589)
chr3 (713-814)||(17136465-17136566)
chr3 (609-671)||(18534758-18534820)
chr3 (515-571)||(6109972-6110028)
chr3 (515-571)||(8490396-8490452)
chr3 (515-571)||(13248515-13248571)
chr3 (609-654)||(18510924-18510969)
chr3 (515-571)||(13211211-13211267)
chr3 (515-571)||(18640989-18641045)
chr3 (513-571)||(17136135-17136193)
chr3 (514-571)||(32057144-32057201)
chr3 (515-557)||(10579611-10579653)
chr3 (513-571)||(18519883-18519941)
chr3 (515-571)||(15607672-15607729)
chr3 (515-571)||(15351237-15351293)
chr3 (515-571)||(15357829-15357885)
chr3 (515-571)||(16482727-16482782)
chr3 (515-571)||(17200427-17200483)
chr3 (515-557)||(10572848-10572890)
chr3 (515-571)||(15601127-15601184)
chr3 (515-571)||(1647768-1647824)
chr3 (515-571)||(13516719-13516775)
chr3 (515-571)||(17781358-17781414)
chr3 (515-571)||(19089985-19090041)
[»] scaffold0234 (4 HSPs)
scaffold0234 (607-814)||(2321-2528)
scaffold0234 (607-814)||(11212-11419)
scaffold0234 (515-571)||(2564-2620)
scaffold0234 (515-571)||(11455-11511)
[»] chr4 (42 HSPs)
chr4 (607-814)||(19926760-19926967)
chr4 (607-814)||(26970463-26970670)
chr4 (607-814)||(55612683-55612890)
chr4 (607-814)||(868597-868804)
chr4 (607-814)||(5707320-5707527)
chr4 (607-814)||(26963640-26963847)
chr4 (609-814)||(18262214-18262419)
chr4 (607-814)||(5713948-5714155)
chr4 (607-814)||(10621333-10621540)
chr4 (607-814)||(10628412-10628619)
chr4 (609-814)||(18269070-18269280)
chr4 (609-814)||(28393134-28393339)
chr4 (609-814)||(4426604-4426808)
chr4 (619-814)||(8845215-8845410)
chr4 (619-814)||(8858179-8858374)
chr4 (607-722)||(12357136-12357251)
chr4 (615-814)||(20311299-20311499)
chr4 (613-814)||(10677555-10677753)
chr4 (613-814)||(10891195-10891393)
chr4 (613-814)||(5668125-5668327)
chr4 (609-813)||(5616215-5616421)
chr4 (613-814)||(35223576-35223767)
chr4 (515-571)||(5713856-5713912)
chr4 (515-571)||(19927003-19927059)
chr4 (515-571)||(26963548-26963604)
chr4 (515-571)||(26970371-26970427)
chr4 (514-571)||(12357043-12357100)
chr4 (515-571)||(5707228-5707284)
chr4 (515-571)||(10621576-10621632)
chr4 (517-571)||(868507-868561)
chr4 (513-571)||(10628655-10628713)
chr4 (515-571)||(17142372-17142428)
chr4 (656-723)||(39074278-39074346)
chr4 (515-571)||(55612594-55612650)
chr4 (633-814)||(21454137-21454319)
chr4 (515-569)||(28393380-28393434)
chr4 (515-571)||(4426847-4426903)
chr4 (515-571)||(18268976-18269032)
chr4 (523-571)||(5668371-5668419)
chr4 (657-716)||(11161913-11161972)
chr4 (517-571)||(20311207-20311261)
chr4 (522-571)||(55992680-55992729)
[»] chr1 (22 HSPs)
chr1 (607-814)||(18252030-18252237)
chr1 (607-814)||(18532514-18532721)
chr1 (607-814)||(27131409-27131616)
chr1 (609-814)||(21171233-21171438)
chr1 (609-814)||(27310577-27310782)
chr1 (609-814)||(16359035-16359240)
chr1 (613-814)||(36816633-36816834)
chr1 (607-814)||(3855919-3856126)
chr1 (607-814)||(22657221-22657429)
chr1 (613-814)||(27277557-27277756)
chr1 (641-814)||(12006539-12006712)
chr1 (641-814)||(12014284-12014457)
chr1 (619-814)||(9917918-9918106)
chr1 (515-571)||(18251936-18251992)
chr1 (515-571)||(18532757-18532813)
chr1 (515-571)||(21171479-21171535)
chr1 (515-571)||(27310821-27310877)
chr1 (613-682)||(30720625-30720694)
chr1 (515-571)||(16359280-16359336)
chr1 (637-714)||(3403248-3403325)
chr1 (637-714)||(3443494-3443571)
chr1 (523-568)||(36816881-36816926)
[»] scaffold0220 (2 HSPs)
scaffold0220 (607-814)||(18288-18495)
scaffold0220 (515-571)||(18196-18252)
[»] chr7 (25 HSPs)
chr7 (607-814)||(29327784-29327991)
chr7 (607-814)||(11536062-11536269)
chr7 (607-814)||(11542980-11543187)
chr7 (609-814)||(15152445-15152650)
chr7 (609-814)||(15148144-15148349)
chr7 (609-814)||(18561009-18561214)
chr7 (609-814)||(12750828-12751033)
chr7 (613-810)||(12738542-12738739)
chr7 (609-814)||(18257842-18258047)
chr7 (613-795)||(13392157-13392338)
chr7 (629-814)||(2364917-2365101)
chr7 (613-700)||(39111819-39111905)
chr7 (640-799)||(7396221-7396381)
chr7 (515-571)||(2653275-2653331)
chr7 (515-571)||(11543223-11543279)
chr7 (515-571)||(12738443-12738499)
chr7 (515-571)||(11536305-11536361)
chr7 (515-571)||(12750733-12750789)
chr7 (515-571)||(15152350-15152406)
chr7 (681-724)||(3132748-3132791)
chr7 (515-570)||(29327690-29327745)
chr7 (657-722)||(10234179-10234244)
chr7 (514-571)||(15148048-15148105)
chr7 (607-639)||(2653207-2653239)
chr7 (515-570)||(13392030-13392085)
[»] scaffold0390 (4 HSPs)
scaffold0390 (607-814)||(6934-7141)
scaffold0390 (607-814)||(13950-14157)
scaffold0390 (515-571)||(7177-7233)
scaffold0390 (515-571)||(14193-14249)
[»] chr8 (16 HSPs)
chr8 (607-814)||(21940665-21940872)
chr8 (609-808)||(28554885-28555084)
chr8 (609-814)||(22171491-22171694)
chr8 (613-814)||(6094129-6094330)
chr8 (613-814)||(24642655-24642856)
chr8 (613-740)||(24636860-24636987)
chr8 (619-811)||(38232380-38232570)
chr8 (515-571)||(21940573-21940629)
chr8 (515-571)||(22070108-22070164)
chr8 (637-798)||(32872857-32873019)
chr8 (515-571)||(6094031-6094087)
chr8 (515-571)||(22171396-22171452)
chr8 (515-567)||(24642556-24642608)
chr8 (628-686)||(2375027-2375085)
chr8 (515-571)||(28554791-28554847)
chr8 (645-708)||(10920234-10920297)
[»] chr2 (8 HSPs)
chr2 (607-814)||(21330248-21330455)
chr2 (607-814)||(18796506-18796713)
chr2 (609-814)||(18619807-18620011)
chr2 (613-752)||(19692598-19692737)
chr2 (672-799)||(20977957-20978084)
chr2 (641-814)||(36270199-36270373)
chr2 (515-571)||(21330493-21330549)
chr2 (641-814)||(18822115-18822290)
[»] scaffold0433 (2 HSPs)
scaffold0433 (607-814)||(7107-7314)
scaffold0433 (515-571)||(7015-7071)
[»] chr5 (20 HSPs)
chr5 (607-814)||(24695466-24695673)
chr5 (607-814)||(18569863-18570070)
chr5 (609-814)||(19714498-19714703)
chr5 (613-814)||(19707218-19707419)
chr5 (612-795)||(27347497-27347679)
chr5 (613-814)||(22547016-22547217)
chr5 (607-716)||(39537962-39538071)
chr5 (611-792)||(17285754-17285935)
chr5 (613-716)||(31886537-31886640)
chr5 (673-814)||(18807034-18807175)
chr5 (611-792)||(17298907-17299088)
chr5 (720-812)||(39538701-39538793)
chr5 (515-571)||(24695709-24695765)
chr5 (515-571)||(19714742-19714798)
chr5 (515-571)||(19707462-19707518)
chr5 (515-571)||(27347722-27347778)
chr5 (633-723)||(33477389-33477479)
chr5 (523-571)||(18570108-18570156)
chr5 (514-570)||(39537869-39537925)
chr5 (657-725)||(11479420-11479489)
[»] scaffold0657 (2 HSPs)
scaffold0657 (607-814)||(993-1200)
scaffold0657 (515-571)||(901-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (607-814)||(25990-26197)
scaffold0186 (515-570)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (609-814)||(5531-5736)
scaffold0063 (523-571)||(5444-5492)
[»] scaffold0008 (2 HSPs)
scaffold0008 (609-790)||(230365-230545)
scaffold0008 (515-571)||(230584-230640)
[»] scaffold0176 (2 HSPs)
scaffold0176 (607-671)||(8446-8510)
scaffold0176 (515-571)||(8546-8602)
[»] scaffold0203 (1 HSPs)
scaffold0203 (515-571)||(23769-23825)
[»] scaffold0326 (2 HSPs)
scaffold0326 (515-571)||(16523-16579)
scaffold0326 (607-640)||(16615-16648)
[»] scaffold0565 (2 HSPs)
scaffold0565 (517-571)||(10202-10256)
scaffold0565 (626-657)||(10127-10158)
[»] scaffold0705 (1 HSPs)
scaffold0705 (515-571)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (515-571)||(8944-9000)
[»] scaffold0767 (1 HSPs)
scaffold0767 (515-551)||(1-37)
[»] scaffold0032 (1 HSPs)
scaffold0032 (636-708)||(92194-92267)


Alignment Details
Target: chr6 (Bit Score: 369; Significance: 0; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 369; E-Value: 0
Query Start/End: Original strand, 119 - 515
Target Start/End: Complemental strand, 10089930 - 10089534
Alignment:
Q  119 gttgaagtttgttcacgtcttctttactaattgattaactttataccttgtttccattcatgacattttgttatttggttttgatttaaaatttcagaag 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10089930 gttgaagtttgttcacgtcttctttactaattgattaactttataccttgtttccattcatgacattttgttatttggttttgatttaaaatttcagaag 10089831  T
Q  219 cttctccatttttgtttagttgctggaaaagaaatgatggacatagacaataatgtggacagaactctatgagttattataccattgtcattaatgtttc 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10089830 cttctccatttttgtttagttgctggaaaagaaatgatggacatagacaataatgtggacagaactctatgagttattataccattgtcatttatgtttc 10089731  T
Q  319 ctcatgcaggattagtttagaagcatttcagttaaaattatggcacgaattttagatgtctagttgagtgttaacttagattgctggaaaagaattatga 418  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10089730 ctcatgcaggactagtttagaagcatttcagttaaaattatggcacgaattttagatgtctagttgagtgttaacttagattgctggaaaagaattatga 10089631  T
Q  419 ataatttcatgtttcctagtgtgctggtcactaatatatacatacaaatgataaattgaaccttcccactcttttcttagaaattgaaatataaagt 515  Q
    | ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||||||    
T  10089630 agaatttcatgtttcctagtgtgctggtcgctaatatatacatacaaatgaaatattgaacgttcccactcttttcttagaaattgaaatataaagt 10089534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  809 gatgat 814  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  809 gatgat 814  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  809 gatgat 814  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  809 gatgat 814  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  809 gatgat 814  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||| ||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  809 gatgat 814  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 646 - 814
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  646 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 745  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  746 tagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    |||| ||  ||| ||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 190 - 276
Target Start/End: Complemental strand, 10101607 - 10101523
Alignment:
Q  190 tatttggttttgatttaaaatttcagaagcttctccatttttgtttagttgctggaaaagaaatgatggacatagacaataatgtgg 276  Q
    ||||||||||||||||||||||||| |||||||  ||| |||||||||||| |||||||| |||||||||||| || ||||||||||    
T  10101607 tatttggttttgatttaaaatttcataagcttc--catgtttgtttagttgatggaaaaggaatgatggacatggataataatgtgg 10101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 645 - 814
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  645 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 744  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  745 gtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 190 - 254
Target Start/End: Complemental strand, 10103019 - 10102955
Alignment:
Q  190 tatttggttttgatttaaaatttcagaagcttctccatttttgtttagttgctggaaaagaaatg 254  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| ||  ||||||||||    
T  10103019 tatttggttttgatttaacatttcagaagcttctccatttttgtttagttactaaaaaagaaatg 10102955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 630 - 814
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  630 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 724  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  725 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    ||| |||||| ||||||||  ||||||| |||| ||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 626 - 799
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  626 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 724  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  725 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 799  Q
    |   |||| | |||||||  ||||| ||||||| ||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 18 - 68
Target Start/End: Complemental strand, 10090004 - 10089954
Alignment:
Q  18 aattctcttagtttaagatatttacatcttgtgtctatgaagtttgttgaa 68  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  10090004 aattctcttagtttaagatattcacatcttgtgtctatgaagtttgttgaa 10089954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 517 - 571
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  517 ttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||| |||| ||||||| |||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 614 - 669
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  614 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 669  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 569
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatca 569  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 645 - 813
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  645 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 742  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  743 ccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 813  Q
    | |||||||||||||  | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| ||||||||||||||||||||| || |||| |||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 529 - 571
Target Start/End: Complemental strand, 13359554 - 13359512
Alignment:
Q  529 ctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||||||||| |||||||||  ||||||||||||    
T  13359554 ctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 16394542 - 16394484
Alignment:
Q  513 agtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||| |||  |||||||| |||||||||||||||| ||||  ||||||||||||    
T  16394542 agtgttggagtaacttctaatagacaatctatattgattgagtttgactttgtatcatg 16394484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 623 - 688
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  623 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 688  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 208; Significance: 1e-113; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 610 - 814
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  610 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 709  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  710 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 809  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  810 atgat 814  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  809 gatgat 814  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 17781319 - 17781118
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T
Q  813 at 814  Q
    ||    
T  17781119 at 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 10579556 - 10579355
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T
Q  813 at 814  Q
    ||    
T  10579356 at 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  809 gatgat 814  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact-------attatgt 799  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  800 aggtagactgatgat 814  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  809 gatgat 814  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 19089946 - 19089745
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T
Q  813 at 814  Q
    ||    
T  19089746 at 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  809 gatgat 814  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 626 - 814
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  626 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 725  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  726 aactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  809 gatgat 814  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 607 - 768
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtg 768  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 32057101 - 32056900
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||| ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatg 32056902  T
Q  813 at 814  Q
    ||    
T  32056901 at 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 1647726 - 1647521
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagac 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||| | ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  809 gatgat 814  Q
    ||||||    
T  1647526 gatgat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 609 - 795
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 795  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 607 - 799
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 799  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 607 - 799
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 799  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 609 - 795
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 795  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||| ||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 614 - 814
Target Start/End: Complemental strand, 24253589 - 24253388
Alignment:
Q  614 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 712  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    | ||||||||||| |||||||| |||||||  || |||||  ||| |||  ||||| | || ||||||||||||||||||||||||| |||||||| |||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatg 24253390  T
Q  813 at 814  Q
    ||    
T  24253389 at 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 713 - 814
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  813 at 814  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 609 - 671
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 671  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 609 - 654
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 654  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 17136135 - 17136193
Alignment:
Q  513 agtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  17136135 agtgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 514 - 571
Target Start/End: Complemental strand, 32057201 - 32057144
Alignment:
Q  514 gtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||    
T  32057201 gtgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 557
Target Start/End: Complemental strand, 10579653 - 10579611
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggttt 557  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggttt 10579611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 513 - 571
Target Start/End: Original strand, 18519883 - 18519941
Alignment:
Q  513 agtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||| ||||  ||||||||||||||||||||||||||||| | |||||||||||    
T  18519883 agtgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  515 tgttggaataagctctaatagccaatctata-ttgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||| |||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||| |||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||| |||||||||||| |||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 515 - 557
Target Start/End: Complemental strand, 10572890 - 10572848
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggttt 557  Q
    ||||||||||||| ||||||||||| |||||||||||||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggttt 10572848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  515 tgttggaataagctctaatagccaatctata-ttgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| | |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 1647824 - 1647768
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| ||||||||   |||||||||||||||||| |||||||||||||    
T  1647824 tgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||| ||||||| |||| ||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| | ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| | ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 204; Significance: 1e-111; HSPs: 4)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  809 gatgat 814  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 18269070 - 18269280
Alignment:
Q  609 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 703  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  704 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 803  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  804 agactgatgat 814  Q
    |||||||||||    
T  18269270 agactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  809 gatgat 814  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  809 gatgat 814  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 619 - 814
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  619 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  719 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 619 - 814
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  619 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 718  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  719 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 607 - 722
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  707 accccattaaacataa 722  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 615 - 814
Target Start/End: Original strand, 20311299 - 20311499
Alignment:
Q  615 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccat 713  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  714 taaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 813  Q
    |||||||||||| ||| || | |||||||  || |||||||||| ||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatga 20311498  T
Q  814 t 814  Q
    |    
T  20311499 t 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 10677753 - 10677555
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 10891393 - 10891195
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 5668327 - 5668125
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  713 ttaaacataaggaaactattctcaaag--tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 810  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||||||| ||| |||  | |||| ||||||| ||||||||||||||||| | ||||| ||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccga 5668129  T
Q  811 tgat 814  Q
    ||||    
T  5668128 tgat 5668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 609 - 813
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||| ||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  807 ctgatga 813  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 613 - 814
Target Start/End: Original strand, 35223576 - 35223767
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          |     
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    | ||||  ||||| | |||||| ||||||| |||||||||||||| |||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatg 35223765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 19927059 - 19927003
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19927059 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 12357043 - 12357100
Alignment:
Q  514 gtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  12357043 gtgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 517 - 571
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  517 ttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 10628713 - 10628655
Alignment:
Q  513 agtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||    
T  10628713 agtgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 17142428 - 17142372
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||    
T  17142428 tgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 656 - 723
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  656 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 723  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 814
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  633 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataaggaaactat 731  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  732 tctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    | | ||| ||||  ||||||| |||| ||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 515 - 569
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatca 569  Q
    ||||||| ||||| |||||||||||||||||||||||||||||  ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 4426903 - 4426847
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||  ||||||||||||||||||||||||||||| ||| |||||||||    
T  4426903 tgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 523 - 571
Target Start/End: Complemental strand, 5668419 - 5668371
Alignment:
Q  523 taagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||| ||||||||||||||||||||||| |||| | |||||||||||    
T  5668419 taagctttaatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 657 - 716
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  657 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 716  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 517 - 571
Target Start/End: Original strand, 20311207 - 20311261
Alignment:
Q  517 ttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||| |||||| ||||||||||||| |||| ||||| ||| |||||||||||||    
T  20311207 ttggagtaagctgtaatagccaatctgtattcattggatttggctttgtatcatg 20311261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 522 - 571
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  522 ataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||| |||||||||||| | ||||||||||||||  ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  809 gatgat 814  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  809 gatgat 814  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  809 gatgat 814  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 36816834 - 36816633
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    ||||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T
Q  813 at 814  Q
    ||    
T  36816634 at 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 7e-73
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||| ||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  607 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 705  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  706 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 805  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||| ||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  806 actgatgat 814  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 27277756 - 27277557
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||| |  || || | |||||| |||||||||||||||| ||||| ||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatg 27277559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 641 - 814
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  641 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 740  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  741 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    || ||||||||||| ||  || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 641 - 814
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  641 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 740  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  741 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    ||||||||| |||||||  || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 814
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  619 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 718  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  719 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    ||||||| | |||||| ||| ||||  |||| ||||||| |||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 18251936 - 18251992
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  18251936 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 18532813 - 18532757
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  18532813 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| |||||||||||||||||||||||| ||||| |||| |||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 613 - 682
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 682  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 714
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  637 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 714  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 637 - 714
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  637 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 714  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 523 - 568
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  523 taagctctaatagccaatctatattgattgggtttagctttgtatc 568  Q
    ||||| ||||||  ||||||||||||||||||||| ||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 200; Significance: 1e-108; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-108; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  809 gatgat 814  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  809 gatgat 814  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  809 gatgat 814  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  809 gatgat 814  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 150; E-Value: 7e-79
Query Start/End: Original strand, 613 - 810
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 810  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 6e-67
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  809 gatgat 814  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 613 - 795
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 795  Q
    |||||   ||||| | |||||| ||||||||  ||||||| |||| ||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 629 - 814
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  629 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 728  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  729 tattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    |||||| ||| ||| ||||||||| | || ||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 613 - 700
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 700  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 640 - 799
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  640 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 738  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  739 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 799  Q
      ||  |||||||||| ||  || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 2653331 - 2653275
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||||||||||||| || |||||||||||||    
T  2653331 tgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 12738443 - 12738499
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  12738443 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 681 - 724
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  681 aacattaagtataacttaattgtgagaccccattaaacataagg 724  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 515 - 570
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcat 570  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 657 - 722
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  657 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 722  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 514 - 571
Target Start/End: Original strand, 15148048 - 15148105
Alignment:
Q  514 gtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||||| ||||| ||||||||||||||||||| ||||||||| | |||||||||||    
T  15148048 gtgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 607 - 639
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  607 acaaggcatttctttattgattttgttttgttt 639  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 570
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcat 570  Q
    ||||||| ||||| |||||| ||||||||||||||||| ||||  |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 2e-94
Query Start/End: Original strand, 609 - 808
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 9e-94
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  809 gatgat 814  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 8e-91
Query Start/End: Original strand, 613 - 814
Target Start/End: Original strand, 6094129 - 6094330
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatg 6094328  T
Q  813 at 814  Q
    ||    
T  6094329 at 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 613 - 814
Target Start/End: Original strand, 24642655 - 24642856
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T
Q  813 at 814  Q
    ||    
T  24642855 at 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 613 - 740
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  713 ttaaacataaggaaactattctcaaagt 740  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 619 - 811
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  619 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 718  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  719 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 811  Q
     |||  | | |||||| |||||||  |||||||| |||| |||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| |||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 22070108 - 22070164
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||    
T  22070108 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 637 - 798
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  637 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 735  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  736 aaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatg 798  Q
    ||| |||  ||||| ||| ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| |||||||||||||||||||||||||||||   |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 567
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtat 567  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 628 - 686
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  628 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt 686  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||| | |||||||||||| |||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 645 - 708
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  645 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 2e-70
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 18796506 - 18796713
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  18796706 ctgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 18619807 - 18620011
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||||||||||| ||||| | |||||| |||||||| || ||||| |||| ||| |||  ||||||  ||||||||||| |||||||||||| ||||| |     
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggcc 18620005  T
Q  809 gatgat 814  Q
    ||||||    
T  18620006 gatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 613 - 752
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaa 752  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 672 - 799
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  672 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 771  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||  || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  772 tatcattaaagcatagagactattatgt 799  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 641 - 814
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  641 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 739  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  740 tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
     ||||||| |||||||||  || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 21330549 - 21330493
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  21330549 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 641 - 814
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  641 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 738  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  739 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
      ||  ||| |||||||||  |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 188; Significance: 1e-101; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-101; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 609 - 814
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  809 gatgat 814  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 19707419 - 19707218
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T
Q  813 at 814  Q
    ||    
T  19707219 at 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 612 - 795
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  612 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 711  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  712 attaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 795  Q
    |||||||  ||||| | |||||| |||||||  ||||||||||||| ||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 613 - 814
Target Start/End: Complemental strand, 22547217 - 22547016
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  713 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    ||||| ||| ||| | |||| | ||||||| || |||||| |||| ||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatg 22547018  T
Q  813 at 814  Q
    ||    
T  22547017 at 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 607 - 716
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  707 accccattaa 716  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 611 - 792
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  611 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 710  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  711 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact 792  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| ||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 613 - 716
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  613 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 712  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  713 ttaa 716  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 673 - 814
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  673 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 771  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| || ||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  772 tatcattaaagcatagagactattatgtaggtagactgatgat 814  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 611 - 792
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  611 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 710  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  711 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact 792  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| |||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 720 - 812
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  720 taaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 812  Q
    |||||| |||||||| ||| ||||| |||| ||||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 723
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  633 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 723  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 571
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  523 taagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    |||||||||||||| |||||||||| ||||||||| |||||||||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

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Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 570
Target Start/End: Original strand, 39537869 - 39537925
Alignment:
Q  514 gtgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcat 570  Q
    |||||||| ||||| |||||||||||||||| |||| || |||||||||||||||||    
T  39537869 gtgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 657 - 725
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  657 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 725  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

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Target: scaffold0657 (Bit Score: 184; Significance: 4e-99; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 607 - 814
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  1193 ctgatgat 1200  T

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Target: scaffold0657; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 901 - 957
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  901 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

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Target: scaffold0186 (Bit Score: 180; Significance: 9e-97; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 180; E-Value: 9e-97
Query Start/End: Original strand, 607 - 814
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 706  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  707 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 806  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  807 ctgatgat 814  Q
    ||||||||    
T  25997 ctgatgat 25990  T

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Target: scaffold0186; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 570
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcat 570  Q
    ||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 2e-88; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 609 - 814
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 808  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  809 gatgat 814  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 523 - 571
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  523 taagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||| |||||||||||||||||||| |||||||| |||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 1e-71; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 609 - 790
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  609 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 708  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  709 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagaga 790  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

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Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 9e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 607 - 671
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 671  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 607 - 640
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  607 acaaggcatttctttattgattttgttttgtttc 640  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 517 - 571
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  517 ttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||| |||||||||||||||||||||||||||||| ||||  ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 626 - 657
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  626 attttgttttgtttcaaaataataaagtccct 657  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||| |||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 515 - 571
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgattgggtttagctttgtatcatg 571  Q
    ||||||||||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 515 - 551
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  515 tgttggaataagctctaatagccaatctatattgatt 551  Q
    ||||||||||||| |||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 636 - 708
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  636 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 708  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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