View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13386_low_12 (Length: 607)
Name: NF13386_low_12
Description: NF13386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13386_low_12 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 510; Significance: 0; HSPs: 18)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 7 - 588
Target Start/End: Complemental strand, 15077027 - 15076446
Alignment:
| Q |
7 |
agtcgagtgagatgaaaaattggatcttctttaagttcttcatatttcaaaaataaaactttgtctggcctaatcatactttctttcaagtaacctaaat |
106 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15077027 |
agtctagtgacatgaaaaattggatcttctttaagttcttcatatttcaaaaatataactttgtctggcctaatcatactttctttcaagtaacctaaat |
15076928 |
T |
|
| Q |
107 |
tatgctcccaaaatgaaccaaatggagtaaccccattgcaaaaactttcaaaagtttcctctaagtttaaaaccggtaaagatggatgttttgaccttat |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |
|
|
| T |
15076927 |
tatgctcccaaaatgaaccaaatggagtaatcccattacaaaaactttcaaaagtttcctctaagcttaaaactggtaaagatggatgttttgaccttat |
15076828 |
T |
|
| Q |
207 |
tttattaatgaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaa |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
15076827 |
tttattaatgaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggagtcttgaattgacttggcaagtgaa |
15076728 |
T |
|
| Q |
307 |
ggaaatggaatgtgagtcccaaaaagccttggttcaattatttttgagagaggaattcggtctttgatatcagcagcataaagattacgttcaatggatg |
406 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
15076727 |
ggaaatggaatgtgagtcccaaaaagccttggttcaattatttttgatagaggaattcggtctttgatatcagcagcataaagattacgttcaatggaag |
15076628 |
T |
|
| Q |
407 |
gcactagttcatgtataatggatttaagtaatggatgattctcaaaagagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagttgt |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| || |
|
|
| T |
15076627 |
gcactagttcatgtataatggatttaagtaatggatgattctcaaaagagtattgattgcgattaacaattgtaaatgtaaatgctctcaaccaagtggt |
15076528 |
T |
|
| Q |
507 |
gcctgattttggtaagcttgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagagattataggttggatc |
588 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
15076527 |
gcctgattttggtaagctagcaacaacaatatcattgtgtttggcttggaaattgttttgaaaagagattataggttggatc |
15076446 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 415; E-Value: 0
Query Start/End: Original strand, 47 - 520
Target Start/End: Original strand, 15171523 - 15171999
Alignment:
| Q |
47 |
catatttcaaaaataaaactttgtctggcctaatcatactttctttcaagtaacctaaattatgctcccaaaatgaaccaaatggagtaaccccattgca |
146 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
15171523 |
catatttcaaaaataaaactttgtctgacctagtcatactttctttcaagtaacctaaattatgctcccaaaatgaaccaaatggagtaaccccattaca |
15171622 |
T |
|
| Q |
147 |
aaaactttcaaaagtttcctctaagtttaaaaccggtaaagatggatgttttgaccttattttattaatgaaaatccaatatgacacaaaagtatcaaat |
246 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
15171623 |
aaaactttcaaaagtttcctctaagcttaaaactgataaagatggatgttttgaccttattttattaacgaaactccaatatgacacaaaagtatcaaat |
15171722 |
T |
|
| Q |
247 |
ggatttctacttatataaacta---tcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatgtgagtcccaaaaagccttggttcaa |
343 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15171723 |
ggatttctacttatataaactactatcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatgtgagtcccaaaaagccttggttcaa |
15171822 |
T |
|
| Q |
344 |
ttatttttgagagaggaattcggtctttgatatcagcagcataaagattacgttcaatggatggcactagttcatgtataatggatttaagtaatggatg |
443 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
15171823 |
ttatttttgatagaggaattcggtctttgatatcagcagcataaagattacgttcaatggaaggcactagtttatgtataatggatttaagtaatgaatg |
15171922 |
T |
|
| Q |
444 |
attctcaaaagagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagttgtgcctgattttggta |
520 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15171923 |
attctcaaaagagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagttgtgcctgattttggta |
15171999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 227 - 588
Target Start/End: Original strand, 15168868 - 15169229
Alignment:
| Q |
227 |
atgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatgtgagtccc |
326 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
15168868 |
atgacacaaaagtatcaaatggatttctacttatataaactatcttacaattagactcttgaatcgacttggcaagtgaagaaaatggaatgtgagtccc |
15168967 |
T |
|
| Q |
327 |
aaaaagccttggttcaattatttttgagagaggaattcggtctttgatatcagcagcataaagattacgttcaatggatggcactagttcatgtataatg |
426 |
Q |
| |
|
||| | ||||||||||||||||||||| | ||||||| |||| || |||||||||||||||||||||||||||||||| |||||||||| |||||||||| |
|
|
| T |
15168968 |
aaatatccttggttcaattatttttgatataggaatttggtccttcatatcagcagcataaagattacgttcaatggaaggcactagtttatgtataatg |
15169067 |
T |
|
| Q |
427 |
gatttaagtaatggatgattctcaaaagagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagttgtgcctgattttggtaagcttg |
526 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
15169068 |
gatttaagtaatggatgattctcaaaggagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagtggtgcctgattttggtaagcttg |
15169167 |
T |
|
| Q |
527 |
caacaacaatatcattgtctttggcttgaaaatgattttgaaaagagattataggttggatc |
588 |
Q |
| |
|
|||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15169168 |
caacaacaatatcactatctttggcttgaaaatgattttgaaaagagattataggttggatc |
15169229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 7 - 240
Target Start/End: Original strand, 15165116 - 15165349
Alignment:
| Q |
7 |
agtcgagtgagatgaaaaattggatcttctttaagttcttcatatttcaaaaataaaactttgtctggcctaatcatactttctttcaagtaacctaaat |
106 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
15165116 |
agtctagtgacatgaaaaattggatcttctttaagttcttcatatttcaaaaataaaattttgtctggactagtcatactttctttcaagtaacctaaag |
15165215 |
T |
|
| Q |
107 |
tatgctcccaaaatgaaccaaatggagtaaccccattgcaaaaactttcaaaagtttcctctaagtttaaaaccggtaaagatggatgttttgaccttat |
206 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| ||| || ||||||||||||||||||||||||| |
|
|
| T |
15165216 |
tatgctcccaaaatgaaccaaatggagttaccccattacaaaaactttcaaaagtttcctttaagcttacaatttgtaaagatggatgttttgaccttat |
15165315 |
T |
|
| Q |
207 |
tttattaatgaaaatccaatatgacacaaaagta |
240 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| |
|
|
| T |
15165316 |
tttattaacgaaactccaatatgacacaaaagta |
15165349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 19 - 587
Target Start/End: Original strand, 4506386 - 4506959
Alignment:
| Q |
19 |
tgaaaaattggatcttctttaagttcttcatatttcaaaaataaaactttgtctggcctaatcatactttctttcaagtaacctaaattatgctcccaaa |
118 |
Q |
| |
|
|||||||||| || ||||||| |||||||||||||| |||| |||||||| || ||| ||| ||||| ||||||||||| || ||||| ||||||| |
|
|
| T |
4506386 |
tgaaaaattgcattctctttaacatcttcatatttcaagaatagaactttgtgtgatctagccatgctttccttcaagtaacccaacttatgatcccaaa |
4506485 |
T |
|
| Q |
119 |
atgaaccaaatggagtaaccccattgcaaaaactttcaaaagtttcctctaagtttaaaaccggtaaagatggatgttttgaccttattttattaatgaa |
218 |
Q |
| |
|
|||||||||||||| | | ||||| ||| ||||||||||| |||| |||| | ||||| ||||||||| ||| ||||||||||||||||| | |
|
|
| T |
4506486 |
atgaaccaaatggacttatcccatcacaataactttcaaaaatttcatctatgcttaaagttggtaaagattgat---ttgaccttattttattagcata |
4506582 |
T |
|
| Q |
219 |
aatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatg |
318 |
Q |
| |
|
|| |||| ||||||||||| ||||| |||||||||| |||||||| ||| |||||||||||||||| |||||||||||| |||||| ||||||| |
|
|
| T |
4506583 |
aaaccaagcagacacaaaagtgtcaaaaggatttctacatatataaattattttacaattggactctttaattgacttggctagtgaaaagaatggaaca |
4506682 |
T |
|
| Q |
319 |
tgagtcccaaaaagccttggttcaattatttttgagagaggaattcggt--ctttga-tatcag---cagcataaagattacgttcaatggatggcacta |
412 |
Q |
| |
|
||||||| |||||||||||||||| | || ||||| || |||| | || || ||||| || |||||| ||| ||||| | | ||||||| |
|
|
| T |
4506683 |
tgagtcc-aaaaagccttggttcattcatgtttgataggttaatttgaaaactctggctatcactaccaccataaacattgtattcaaagaaaggcacta |
4506781 |
T |
|
| Q |
413 |
gttcatgtataatggatttaagtaatggatgattctcaaa---agagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagttgtgcc |
509 |
Q |
| |
|
|||||||| | || |||||||||||||||||| || || |||| | |||| ||||| ||||| | |||||| |||||| |||||||||||||||| |
|
|
| T |
4506782 |
gttcatgtgaattgaatttaagtaatggatgatcttctaaggaagagaaatgatgacgattaacaatggcaaatgtgagtgctttcaaccaagttgtgcc |
4506881 |
T |
|
| Q |
510 |
tgattttggtaagcttgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagagattataggttggat |
587 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4506882 |
ggattttggtaagctagcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagagtttataggttggat |
4506959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 214 - 343
Target Start/End: Complemental strand, 15066876 - 15066747
Alignment:
| Q |
214 |
atgaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatg |
313 |
Q |
| |
|
|||||| |||||||||| ||||| ||||||||||| ||||||| |||||||| ||| |||||||||||||||||||||||||||| | |||||||||| |
|
|
| T |
15066876 |
atgaaagtccaatatgatacaaatgtatcaaatgggtttctacatatataaattattttacaattggactcttgaattgacttgggcaacgaaggaaatg |
15066777 |
T |
|
| Q |
314 |
gaatgtgagtcccaaaaagccttggttcaa |
343 |
Q |
| |
|
| |||||||| ||| ||||||||||||||| |
|
|
| T |
15066776 |
gcatgtgagttccataaagccttggttcaa |
15066747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 205 - 342
Target Start/End: Original strand, 15214555 - 15214692
Alignment:
| Q |
205 |
attttattaatgaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtg |
304 |
Q |
| |
|
||||| || ||||||||||||||||| ||||| ||||||||||| ||||||| |||||||| ||| |||||||||||||||| || |||||||| | | |
|
|
| T |
15214555 |
attttgttgatgaaaatccaatatgatacaaatgtatcaaatgggtttctacatatataaattattttacaattggactctttaactgacttgggcaacg |
15214654 |
T |
|
| Q |
305 |
aaggaaatggaatgtgagtcccaaaaagccttggttca |
342 |
Q |
| |
|
|||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
15214655 |
aaggaaatggcatgtgagttccaaaaagccttggttca |
15214692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 216 - 342
Target Start/End: Complemental strand, 15052675 - 15052549
Alignment:
| Q |
216 |
gaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatgga |
315 |
Q |
| |
|
|||| |||||||||| ||||| |||||||||| ||||||| |||||||| ||| |||||||||||||||| || |||||||| | ||||||||||| |
|
|
| T |
15052675 |
gaaagtccaatatgatacaaatatatcaaatgggtttctacatatataaattattttacaattggactctttaactgacttgggcaacgaaggaaatggc |
15052576 |
T |
|
| Q |
316 |
atgtgagtcccaaaaagccttggttca |
342 |
Q |
| |
|
|||||||| |||||||||||||||||| |
|
|
| T |
15052575 |
atgtgagttccaaaaagccttggttca |
15052549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 221 - 353
Target Start/End: Complemental strand, 13033544 - 13033412
Alignment:
| Q |
221 |
tccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatgtg |
320 |
Q |
| |
|
|||||||||| ||||| ||||||||||| ||||||| |||||||| || |||||| ||||||||| || ||||||| | ||| | ||||||||||| |
|
|
| T |
13033544 |
tccaatatgatacaaatgtatcaaatgggtttctacatatataaatgattttacaactggactctttaaccgacttgggcaacgaaaggaatggaatgtg |
13033445 |
T |
|
| Q |
321 |
agtcccaaaaagccttggttcaattatttttga |
353 |
Q |
| |
|
||| |||||||||||||||||||| || ||||| |
|
|
| T |
13033444 |
agtgccaaaaagccttggttcaatcatatttga |
13033412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 234 - 342
Target Start/End: Complemental strand, 15000279 - 15000171
Alignment:
| Q |
234 |
aaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatgtgagtcccaaaaagc |
333 |
Q |
| |
|
|||||| |||| |||||| |||| |||||||| |||||||||||||| || | |||||||||||| | ||| ||||||||| ||||| |||||||| |
|
|
| T |
15000279 |
aaaagtgtcaagtggattcctacatatataaatgatcttacaattggattccttaattgacttggccaaggaattaaatggaatatgagttccaaaaagt |
15000180 |
T |
|
| Q |
334 |
cttggttca |
342 |
Q |
| |
|
||||||||| |
|
|
| T |
15000179 |
cttggttca |
15000171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 221 - 344
Target Start/End: Complemental strand, 15751292 - 15751169
Alignment:
| Q |
221 |
tccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtgaaggaaatggaatgtg |
320 |
Q |
| |
|
||||||||||||| |||| ||||| || || || | ||| |||| ||||||||||||||| || | |||||||| || | |||| ||| |||||||| |
|
|
| T |
15751292 |
tccaatatgacacgtaagtgtcaaaagggttcctgcatatgtaaattatcttacaattggattccttgattgactttgctaaggaagcaaaaggaatgtg |
15751193 |
T |
|
| Q |
321 |
agtcccaaaaagccttggttcaat |
344 |
Q |
| |
|
||| |||||||||||||||||||| |
|
|
| T |
15751192 |
agttccaaaaagccttggttcaat |
15751169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 526 - 587
Target Start/End: Complemental strand, 15164456 - 15164395
Alignment:
| Q |
526 |
gcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagagattataggttggat |
587 |
Q |
| |
|
|||||||||| | |||||||||| |||||||||| |||||||| |||| ||||||||||||| |
|
|
| T |
15164456 |
gcaacaacaacagcattgtctttagcttgaaaatcattttgaacagagtttataggttggat |
15164395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 536 - 588
Target Start/End: Original strand, 15171998 - 15172050
Alignment:
| Q |
536 |
tatcattgtctttggcttgaaaatgattttgaaaagagattataggttggatc |
588 |
Q |
| |
|
||||||||| ||||||||| |||| ||||||||||||||||||||||||||| |
|
|
| T |
15171998 |
tatcattgtgtttggcttggaaattgttttgaaaagagattataggttggatc |
15172050 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 498 - 573
Target Start/End: Original strand, 15214860 - 15214935
Alignment:
| Q |
498 |
ccaagttgtgcctgattttggtaagcttgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagag |
573 |
Q |
| |
|
|||||| ||||| |||||||| | | |||||||||||||||| ||||||| || ||||||| ||||||||||||| |
|
|
| T |
15214860 |
ccaagtagtgccagattttggaatggatgcaacaacaatatcactgtctttagcatgaaaattattttgaaaagag |
15214935 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 526 - 580
Target Start/End: Complemental strand, 15750978 - 15750923
Alignment:
| Q |
526 |
gcaacaacaatatcattgtcttt-ggcttgaaaatgattttgaaaagagattatag |
580 |
Q |
| |
|
|||||||||| |||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
15750978 |
gcaacaacaacatcactatcttttggcttgaaaatgattttgaaaagagattatag |
15750923 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 525 - 571
Target Start/End: Complemental strand, 13033225 - 13033179
Alignment:
| Q |
525 |
tgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaag |
571 |
Q |
| |
|
||||||||||||||||||||||||||| ||||| | ||||||||||| |
|
|
| T |
13033225 |
tgcaacaacaatatcattgtctttggcatgaaatttattttgaaaag |
13033179 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 498 - 587
Target Start/End: Complemental strand, 15000008 - 14999919
Alignment:
| Q |
498 |
ccaagttgtgcctgattttggtaagcttgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagagattataggttggat |
587 |
Q |
| |
|
|||||| ||||||| |||||| | | |||||||| || |||| | ||||||| |||||||| |||| |||||||| ||||||||||||| |
|
|
| T |
15000008 |
ccaagtggtgcctgcttttggcatggatgcaacaataacatcactatctttggtttgaaaattatttcgaaaagagtttataggttggat |
14999919 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 498 - 573
Target Start/End: Complemental strand, 15066583 - 15066508
Alignment:
| Q |
498 |
ccaagttgtgcctgattttggtaagcttgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagag |
573 |
Q |
| |
|
|||||| ||||| |||||||| | | |||||| ||||||||| | |||||||| ||||||| ||||||||||||| |
|
|
| T |
15066583 |
ccaagtagtgccagattttggcatggatgcaactacaatatcactatctttggcatgaaaattattttgaaaagag |
15066508 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 72; Significance: 2e-32; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 205 - 344
Target Start/End: Original strand, 1618179 - 1618318
Alignment:
| Q |
205 |
attttattaatgaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtg |
304 |
Q |
| |
|
||||| || |||||| ||||||| ||||||||||| |||||||| ||||||| ||| |||| ||||||||||||||| |||| |||||||||||| || | |
|
|
| T |
1618179 |
attttgttcatgaaattccaataagacacaaaagtgtcaaatgggtttctacatatgtaaattatcttacaattggattctttaattgacttggctagag |
1618278 |
T |
|
| Q |
305 |
aaggaaatggaatgtgagtcccaaaaagccttggttcaat |
344 |
Q |
| |
|
||| ||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
1618279 |
aagtaaaaggaatatgagttccaaaaagccttggttcaat |
1618318 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 205 - 344
Target Start/End: Original strand, 1626744 - 1626883
Alignment:
| Q |
205 |
attttattaatgaaaatccaatatgacacaaaagtatcaaatggatttctacttatataaactatcttacaattggactcttgaattgacttggcaagtg |
304 |
Q |
| |
|
||||| || |||||| ||||||| ||||||||||| |||||||| || |||| ||| |||| |||||||||||||||||||| ||| |||||||| || | |
|
|
| T |
1626744 |
attttgttcatgaaattccaataagacacaaaagtgtcaaatgggttcctacatatgtaaattatcttacaattggactctttaatagacttggctagag |
1626843 |
T |
|
| Q |
305 |
aaggaaatggaatgtgagtcccaaaaagccttggttcaat |
344 |
Q |
| |
|
|| | || ||||||||||| ||||||| |||||||||||| |
|
|
| T |
1626844 |
aatggaaaggaatgtgagttccaaaaatccttggttcaat |
1626883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 429 - 580
Target Start/End: Original strand, 1618409 - 1618563
Alignment:
| Q |
429 |
tttaagtaatggatgattctcaa---aagagtattgattgcgatttacaattgtaaatgtaagtgctctcaaccaagttgtgcctgattttggtaagctt |
525 |
Q |
| |
|
||||||||||||||||||||| | |||| | |||| |||||| | ||||| ||| || || ||| ||||||| ||||| ||||||||||| | |
|
|
| T |
1618409 |
tttaagtaatggatgattctctagggaagaaaaatgatggcgattaataattgcaaaggttagggctttcaaccatgttgttcctgattttggcatagag |
1618508 |
T |
|
| Q |
526 |
gcaacaacaatatcattgtctttggcttgaaaatgattttgaaaagagattatag |
580 |
Q |
| |
|
|||| ||||| |||| | ||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
1618509 |
gcaataacaacatcactatctttagcttgaaaatcattttgaaaagagattatag |
1618563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 496 - 571
Target Start/End: Original strand, 3653192 - 3653267
Alignment:
| Q |
496 |
aaccaagttgtgcctgattttggtaagcttgcaacaacaatatcattgtctttggcttgaaaatgattttgaaaag |
571 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||| || |||| | ||||| ||||| ||||| ||||| |||| |
|
|
| T |
3653192 |
aaccaagttgtgcctgattttggtacggttgcaacaaaaacatcactttctttagcttggaaatgcttttggaaag |
3653267 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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