View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13386_low_22 (Length: 437)

Name: NF13386_low_22
Description: NF13386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13386_low_22
NF13386_low_22
[»] chr3 (105 HSPs)
chr3 (219-426)||(6110064-6110271)
chr3 (219-426)||(10572592-10572799)
chr3 (219-426)||(15600884-15601091)
chr3 (219-426)||(15607429-15607636)
chr3 (222-426)||(13211305-13211509)
chr3 (219-426)||(13248607-13248814)
chr3 (221-426)||(16482483-16482688)
chr3 (225-426)||(17781118-17781319)
chr3 (225-426)||(10579355-10579556)
chr3 (221-426)||(18522665-18522870)
chr3 (219-426)||(15357586-15357793)
chr3 (219-426)||(8490488-8490702)
chr3 (221-426)||(18519980-18520182)
chr3 (225-426)||(19089745-19089946)
chr3 (221-426)||(17200184-17200389)
chr3 (238-426)||(15342219-15342407)
chr3 (221-426)||(13516813-13517018)
chr3 (219-380)||(18640792-18640953)
chr3 (225-426)||(32056900-32057101)
chr3 (225-426)||(1647521-1647726)
chr3 (221-407)||(16200128-16200313)
chr3 (219-411)||(29924971-29925163)
chr3 (219-411)||(29974124-29974316)
chr3 (1-127)||(12497949-12498075)
chr3 (1-127)||(17489551-17489677)
chr3 (221-407)||(16200434-16200619)
chr3 (1-127)||(16492484-16492610)
chr3 (1-127)||(14876802-14876928)
chr3 (1-127)||(9522420-9522546)
chr3 (1-127)||(16371114-16371240)
chr3 (1-120)||(15348548-15348667)
chr3 (1-127)||(16691861-16691987)
chr3 (226-426)||(24253388-24253589)
chr3 (1-120)||(16635481-16635600)
chr3 (1-120)||(26792702-26792821)
chr3 (1-120)||(43162805-43162924)
chr3 (1-120)||(48425155-48425274)
chr3 (5-125)||(16807233-16807353)
chr3 (1-120)||(10905918-10906037)
chr3 (1-127)||(15208592-15208718)
chr3 (325-426)||(17136465-17136566)
chr3 (1-121)||(15247854-15247974)
chr3 (1-120)||(6600455-6600574)
chr3 (1-120)||(10005308-10005427)
chr3 (1-120)||(13252398-13252517)
chr3 (1-120)||(15589695-15589814)
chr3 (1-120)||(16412585-16412704)
chr3 (1-120)||(20062357-20062476)
chr3 (1-120)||(53385321-53385440)
chr3 (1-120)||(15227367-15227486)
chr3 (1-120)||(15338977-15339096)
chr3 (1-120)||(15402813-15402932)
chr3 (1-120)||(15725236-15725355)
chr3 (1-120)||(16756888-16757007)
chr3 (1-120)||(5425233-5425351)
chr3 (1-89)||(15016047-15016135)
chr3 (221-283)||(18534758-18534820)
chr3 (1-118)||(13322944-13323061)
chr3 (127-183)||(6109972-6110028)
chr3 (127-183)||(8490396-8490452)
chr3 (127-183)||(13248515-13248571)
chr3 (1-120)||(13972412-13972531)
chr3 (1-120)||(14086391-14086510)
chr3 (1-118)||(14571568-14571685)
chr3 (127-183)||(13211211-13211267)
chr3 (127-183)||(18640989-18641045)
chr3 (30-120)||(12850600-12850690)
chr3 (221-266)||(18510924-18510969)
chr3 (127-183)||(17136137-17136193)
chr3 (127-169)||(10579611-10579653)
chr3 (127-183)||(15607672-15607729)
chr3 (1-118)||(15953260-15953377)
chr3 (1-118)||(18134638-18134755)
chr3 (1-118)||(47123664-47123781)
chr3 (127-183)||(15351237-15351293)
chr3 (127-183)||(15357829-15357885)
chr3 (127-183)||(16482727-16482782)
chr3 (127-183)||(17200427-17200483)
chr3 (127-183)||(18519885-18519941)
chr3 (127-169)||(10572848-10572890)
chr3 (126-183)||(1647768-1647825)
chr3 (1-118)||(8274702-8274819)
chr3 (9-118)||(10420345-10420454)
chr3 (127-183)||(15601127-15601184)
chr3 (3-120)||(16836804-16836921)
chr3 (1-102)||(18748401-18748502)
chr3 (127-183)||(13516719-13516775)
chr3 (127-183)||(17781358-17781414)
chr3 (127-183)||(19089985-19090041)
chr3 (127-183)||(32057144-32057200)
chr3 (30-120)||(44776965-44777055)
chr3 (1-118)||(10383689-10383806)
chr3 (29-118)||(16329979-16330068)
chr3 (1-118)||(16743006-16743123)
chr3 (127-183)||(18510829-18510885)
chr3 (127-183)||(18522570-18522626)
chr3 (135-183)||(18534671-18534719)
chr3 (51-118)||(15576470-15576537)
chr3 (30-120)||(8759403-8759493)
chr3 (1-118)||(11304065-11304182)
chr3 (1-118)||(12360834-12360951)
chr3 (1-118)||(13975348-13975465)
chr3 (51-120)||(16381269-16381338)
chr3 (127-183)||(29924879-29924935)
chr3 (127-183)||(29974032-29974088)
[»] scaffold0234 (6 HSPs)
scaffold0234 (219-426)||(2321-2528)
scaffold0234 (219-426)||(11212-11419)
scaffold0234 (5-115)||(25142-25252)
scaffold0234 (127-183)||(2564-2620)
scaffold0234 (127-183)||(11455-11511)
scaffold0234 (1-118)||(16238-16355)
[»] chr4 (90 HSPs)
chr4 (219-426)||(19926760-19926967)
chr4 (219-426)||(26970463-26970670)
chr4 (219-426)||(55612683-55612890)
chr4 (219-426)||(868597-868804)
chr4 (219-426)||(5707320-5707527)
chr4 (219-426)||(26963640-26963847)
chr4 (221-426)||(18262214-18262419)
chr4 (219-426)||(5713948-5714155)
chr4 (219-426)||(10621333-10621540)
chr4 (219-426)||(10628412-10628619)
chr4 (221-426)||(18269070-18269280)
chr4 (221-426)||(28393134-28393339)
chr4 (221-426)||(4426604-4426808)
chr4 (231-426)||(8845215-8845410)
chr4 (231-426)||(8858179-8858374)
chr4 (219-334)||(12357136-12357251)
chr4 (1-127)||(15149810-15149936)
chr4 (227-426)||(20311299-20311499)
chr4 (1-127)||(16252249-16252375)
chr4 (1-120)||(27711425-27711544)
chr4 (5-127)||(16355253-16355375)
chr4 (1-120)||(12476689-12476808)
chr4 (1-120)||(18297294-18297413)
chr4 (1-120)||(19778597-19778716)
chr4 (1-120)||(23955836-23955955)
chr4 (1-127)||(7090514-7090640)
chr4 (1-120)||(29039208-29039327)
chr4 (1-127)||(14652390-14652516)
chr4 (1-127)||(18227250-18227376)
chr4 (1-120)||(12523765-12523884)
chr4 (1-115)||(14303782-14303896)
chr4 (1-120)||(8386501-8386620)
chr4 (1-127)||(14851170-14851296)
chr4 (1-120)||(40473129-40473248)
chr4 (1-127)||(14680649-14680775)
chr4 (1-120)||(8053427-8053546)
chr4 (1-120)||(14266703-14266822)
chr4 (225-426)||(10677555-10677753)
chr4 (225-426)||(10891195-10891393)
chr4 (225-426)||(5668125-5668327)
chr4 (12-120)||(15364475-15364583)
chr4 (1-127)||(14159574-14159700)
chr4 (221-425)||(5616215-5616421)
chr4 (225-426)||(35223576-35223767)
chr4 (1-109)||(15415090-15415198)
chr4 (1-118)||(15003428-15003545)
chr4 (125-183)||(19927003-19927061)
chr4 (127-183)||(5713856-5713912)
chr4 (127-183)||(26963548-26963604)
chr4 (127-183)||(26970371-26970427)
chr4 (127-183)||(5707228-5707284)
chr4 (127-183)||(10621576-10621632)
chr4 (127-183)||(12357044-12357100)
chr4 (123-183)||(17142372-17142432)
chr4 (129-183)||(868507-868561)
chr4 (1-118)||(3264858-3264975)
chr4 (1-118)||(11207295-11207412)
chr4 (1-74)||(16676507-16676580)
chr4 (1-65)||(1640229-1640293)
chr4 (127-183)||(10628655-10628711)
chr4 (127-183)||(55612594-55612650)
chr4 (127-181)||(28393380-28393434)
chr4 (126-183)||(4426847-4426904)
chr4 (127-183)||(18268976-18269032)
chr4 (268-335)||(39074278-39074346)
chr4 (245-426)||(21454137-21454319)
chr4 (1-102)||(12132473-12132574)
chr4 (1-118)||(15359154-15359271)
chr4 (1-118)||(16146003-16146120)
chr4 (1-118)||(16445276-16445393)
chr4 (29-118)||(20891073-20891162)
chr4 (1-118)||(27900477-27900594)
chr4 (1-116)||(1649341-1649456)
chr4 (31-118)||(15246015-15246102)
chr4 (1-116)||(55375422-55375537)
chr4 (30-116)||(15070506-15070592)
chr4 (1-118)||(15293221-15293338)
chr4 (1-118)||(29453601-29453718)
chr4 (134-183)||(55992680-55992729)
chr4 (1-109)||(18550126-18550234)
chr4 (269-328)||(11161913-11161972)
chr4 (30-120)||(16752682-16752772)
chr4 (142-183)||(5668371-5668412)
chr4 (1-118)||(13247736-13247853)
chr4 (1-118)||(14997407-14997524)
chr4 (135-183)||(8845118-8845166)
chr4 (135-183)||(8858082-8858130)
chr4 (75-115)||(9849616-9849656)
chr4 (143-183)||(18262136-18262176)
chr4 (356-408)||(39074218-39074270)
[»] chr1 (57 HSPs)
chr1 (219-426)||(18252030-18252237)
chr1 (219-426)||(18532514-18532721)
chr1 (219-426)||(27131409-27131616)
chr1 (221-426)||(21171233-21171438)
chr1 (221-426)||(27310577-27310782)
chr1 (221-426)||(16359035-16359240)
chr1 (225-426)||(36816633-36816834)
chr1 (219-426)||(3855919-3856126)
chr1 (219-426)||(22657221-22657429)
chr1 (1-127)||(19761002-19761128)
chr1 (1-127)||(20136875-20137001)
chr1 (1-120)||(16350735-16350854)
chr1 (1-120)||(33391165-33391284)
chr1 (1-127)||(17045151-17045277)
chr1 (1-120)||(21837054-21837173)
chr1 (1-120)||(51333629-51333748)
chr1 (1-127)||(20249947-20250073)
chr1 (1-127)||(50620380-50620506)
chr1 (4-127)||(16369394-16369517)
chr1 (1-120)||(21830407-21830526)
chr1 (1-120)||(19106471-19106590)
chr1 (42-127)||(16078810-16078895)
chr1 (1-127)||(21747632-21747757)
chr1 (1-115)||(41354605-41354719)
chr1 (225-426)||(27277557-27277756)
chr1 (57-127)||(50612608-50612678)
chr1 (253-426)||(12006539-12006712)
chr1 (253-426)||(12014284-12014457)
chr1 (125-183)||(18532757-18532815)
chr1 (126-183)||(18251935-18251992)
chr1 (1-118)||(19665012-19665129)
chr1 (1-118)||(11382700-11382817)
chr1 (1-118)||(20294518-20294635)
chr1 (1-118)||(20940199-20940316)
chr1 (231-426)||(9917918-9918106)
chr1 (1-118)||(19854420-19854537)
chr1 (127-183)||(27310821-27310877)
chr1 (1-118)||(41307931-41308048)
chr1 (1-118)||(46518827-46518944)
chr1 (127-183)||(16359280-16359336)
chr1 (56-118)||(22142232-22142294)
chr1 (60-118)||(37677185-37677243)
chr1 (1-118)||(20856897-20857014)
chr1 (225-294)||(30720625-30720694)
chr1 (127-183)||(21171479-21171535)
chr1 (249-326)||(3403248-3403325)
chr1 (249-326)||(3443494-3443571)
chr1 (29-118)||(20075223-20075312)
chr1 (1-118)||(20831528-20831645)
chr1 (1-118)||(31550317-31550434)
chr1 (135-180)||(36816881-36816926)
chr1 (127-183)||(3856164-3856220)
chr1 (30-118)||(22433281-22433369)
chr1 (127-179)||(22657469-22657521)
chr1 (51-118)||(20914316-20914383)
chr1 (127-183)||(27131652-27131704)
chr1 (127-183)||(27277800-27277856)
[»] scaffold0220 (3 HSPs)
scaffold0220 (219-426)||(18288-18495)
scaffold0220 (1-127)||(890-1015)
scaffold0220 (127-183)||(18196-18252)
[»] chr7 (79 HSPs)
chr7 (219-426)||(29327784-29327991)
chr7 (219-426)||(11536062-11536269)
chr7 (219-426)||(11542980-11543187)
chr7 (221-426)||(15152445-15152650)
chr7 (221-426)||(15148144-15148349)
chr7 (221-426)||(18561009-18561214)
chr7 (221-426)||(12750828-12751033)
chr7 (225-422)||(12738542-12738739)
chr7 (221-426)||(18257842-18258047)
chr7 (1-120)||(8707683-8707802)
chr7 (1-120)||(13686142-13686261)
chr7 (1-120)||(15161130-15161249)
chr7 (3-127)||(17391-17515)
chr7 (1-120)||(18551831-18551950)
chr7 (1-127)||(15154725-15154851)
chr7 (1-120)||(8198706-8198825)
chr7 (1-120)||(11237286-11237405)
chr7 (1-120)||(44791424-44791543)
chr7 (1-127)||(14037878-14038004)
chr7 (1-127)||(14347908-14348034)
chr7 (1-120)||(23516842-23516961)
chr7 (1-127)||(15203950-15204076)
chr7 (1-127)||(15624623-15624749)
chr7 (1-121)||(10871072-10871192)
chr7 (1-120)||(14332475-14332594)
chr7 (1-120)||(11553175-11553294)
chr7 (1-120)||(12687579-12687698)
chr7 (1-120)||(18177820-18177939)
chr7 (1-115)||(14954703-14954817)
chr7 (1-120)||(12206851-12206970)
chr7 (225-407)||(13392157-13392338)
chr7 (1-94)||(35964923-35965016)
chr7 (1-120)||(19147290-19147409)
chr7 (1-120)||(20746689-20746808)
chr7 (241-426)||(2364917-2365101)
chr7 (1-118)||(14264295-14264412)
chr7 (1-118)||(15102652-15102769)
chr7 (124-183)||(12738440-12738499)
chr7 (225-312)||(39111819-39111905)
chr7 (126-183)||(2653275-2653332)
chr7 (1-118)||(16072345-16072462)
chr7 (252-411)||(7396221-7396381)
chr7 (127-183)||(11543223-11543279)
chr7 (1-91)||(21662071-21662158)
chr7 (1-118)||(8212179-8212296)
chr7 (1-118)||(11306314-11306431)
chr7 (1-118)||(49152382-49152499)
chr7 (127-183)||(11536305-11536361)
chr7 (127-183)||(12750733-12750789)
chr7 (127-183)||(15152350-15152406)
chr7 (1-120)||(11388479-11388597)
chr7 (127-182)||(29327690-29327745)
chr7 (1-109)||(41219-41327)
chr7 (127-183)||(15148049-15148105)
chr7 (293-336)||(3132748-3132791)
chr7 (1-60)||(11772314-11772373)
chr7 (1-118)||(4440008-4440125)
chr7 (269-334)||(10234179-10234244)
chr7 (1-102)||(13353247-13353348)
chr7 (1-118)||(13665629-13665746)
chr7 (127-182)||(13392030-13392085)
chr7 (51-102)||(14936443-14936494)
chr7 (1-118)||(7823980-7824097)
chr7 (1-118)||(21674606-21674723)
chr7 (1-118)||(26118656-26118773)
chr7 (1-118)||(27107847-27107964)
chr7 (219-251)||(2653207-2653239)
chr7 (30-118)||(14286456-14286544)
chr7 (127-183)||(18258087-18258143)
chr7 (51-102)||(15364036-15364087)
chr7 (51-118)||(16950572-16950639)
chr7 (1-120)||(18054004-18054123)
chr7 (30-120)||(23199823-23199913)
chr7 (30-120)||(23505950-23506040)
chr7 (3-120)||(14129952-14130069)
chr7 (3-120)||(14433770-14433887)
chr7 (1-102)||(45146652-45146752)
chr7 (127-183)||(18560913-18560969)
chr7 (3-103)||(20466877-20466977)
[»] chr6 (86 HSPs)
chr6 (219-426)||(27381252-27381459)
chr6 (219-426)||(27471635-27471842)
chr6 (221-426)||(17684469-17684674)
chr6 (219-426)||(29308890-29309097)
chr6 (219-426)||(29315850-29316057)
chr6 (221-426)||(16566320-16566525)
chr6 (219-426)||(17691440-17691647)
chr6 (221-426)||(188977-189182)
chr6 (221-426)||(25537159-25537364)
chr6 (221-426)||(11651725-11651930)
chr6 (221-426)||(13359269-13359474)
chr6 (1-127)||(16963576-16963702)
chr6 (1-127)||(16927849-16927975)
chr6 (1-120)||(16626926-16627045)
chr6 (1-120)||(24313377-24313496)
chr6 (1-120)||(29592129-29592248)
chr6 (1-127)||(19864633-19864759)
chr6 (1-127)||(21833190-21833316)
chr6 (1-127)||(22078897-22079023)
chr6 (1-127)||(25610070-25610196)
chr6 (1-127)||(25765499-25765624)
chr6 (1-127)||(12497972-12498098)
chr6 (1-127)||(12505301-12505427)
chr6 (1-127)||(12510803-12510929)
chr6 (3-127)||(18408154-18408278)
chr6 (1-127)||(22762664-22762790)
chr6 (1-127)||(23078415-23078541)
chr6 (1-120)||(2875012-2875131)
chr6 (1-120)||(28263406-28263525)
chr6 (1-120)||(28342155-28342274)
chr6 (1-127)||(27331642-27331768)
chr6 (1-127)||(27392382-27392508)
chr6 (5-120)||(25112505-25112620)
chr6 (1-120)||(1543293-1543412)
chr6 (1-116)||(5839428-5839543)
chr6 (1-120)||(27187389-27187508)
chr6 (1-120)||(27261732-27261851)
chr6 (1-120)||(28292581-28292700)
chr6 (1-120)||(25750762-25750881)
chr6 (1-119)||(25750900-25751018)
chr6 (258-426)||(20553587-20553755)
chr6 (1-120)||(21471554-21471673)
chr6 (1-116)||(25768148-25768263)
chr6 (54-120)||(17032515-17032581)
chr6 (129-183)||(17691683-17691737)
chr6 (1-127)||(18197756-18197882)
chr6 (9-118)||(15459291-15459400)
chr6 (257-426)||(17850495-17850663)
chr6 (1-118)||(19879253-19879370)
chr6 (1-118)||(22796841-22796958)
chr6 (30-118)||(17415441-17415529)
chr6 (127-183)||(27381495-27381551)
chr6 (127-183)||(27471878-27471934)
chr6 (242-426)||(27925772-27925961)
chr6 (127-183)||(29308798-29308854)
chr6 (127-183)||(29315758-29315814)
chr6 (1-116)||(14131388-14131503)
chr6 (1-120)||(18794643-18794762)
chr6 (1-120)||(21564341-21564460)
chr6 (1-127)||(1640718-1640844)
chr6 (238-411)||(8509941-8510115)
chr6 (1-118)||(11287807-11287924)
chr6 (1-118)||(34645795-34645912)
chr6 (127-183)||(17684712-17684768)
chr6 (1-67)||(11291818-11291884)
chr6 (127-181)||(11651630-11651684)
chr6 (1-118)||(10469058-10469175)
chr6 (1-118)||(11280714-11280831)
chr6 (127-183)||(25537405-25537461)
chr6 (226-281)||(31258065-31258120)
chr6 (257-425)||(20736604-20736773)
chr6 (1-118)||(16098005-16098122)
chr6 (1-118)||(16382582-16382699)
chr6 (1-118)||(18838117-18838234)
chr6 (135-183)||(13359512-13359560)
chr6 (135-183)||(16566563-16566611)
chr6 (51-118)||(15078623-15078690)
chr6 (1-116)||(18800899-18801014)
chr6 (126-183)||(189221-189281)
chr6 (30-120)||(27560855-27560945)
chr6 (1-102)||(1648993-1649094)
chr6 (235-300)||(22259925-22259990)
chr6 (1-118)||(23996203-23996320)
chr6 (1-118)||(24364367-24364484)
chr6 (1-118)||(25743296-25743413)
chr6 (30-118)||(14381705-14381793)
[»] scaffold0390 (4 HSPs)
scaffold0390 (219-426)||(6934-7141)
scaffold0390 (219-426)||(13950-14157)
scaffold0390 (127-183)||(7177-7233)
scaffold0390 (127-183)||(14193-14249)
[»] chr8 (74 HSPs)
chr8 (219-426)||(21940665-21940872)
chr8 (221-420)||(28554885-28555084)
chr8 (221-426)||(22171491-22171694)
chr8 (225-426)||(6094129-6094330)
chr8 (225-426)||(24642655-24642856)
chr8 (225-352)||(24636860-24636987)
chr8 (1-127)||(19978115-19978241)
chr8 (1-127)||(21167044-21167170)
chr8 (1-127)||(21251090-21251216)
chr8 (1-127)||(21394372-21394498)
chr8 (1-127)||(21788865-21788991)
chr8 (1-127)||(30313651-30313777)
chr8 (1-127)||(15533528-15533654)
chr8 (1-127)||(16408552-16408678)
chr8 (1-120)||(17674530-17674649)
chr8 (1-120)||(19112845-19112964)
chr8 (1-127)||(23650189-23650315)
chr8 (1-127)||(32600292-32600418)
chr8 (1-127)||(22032180-22032306)
chr8 (1-127)||(22133548-22133674)
chr8 (1-127)||(22164698-22164824)
chr8 (2-121)||(23949043-23949162)
chr8 (1-123)||(21922242-21922364)
chr8 (1-127)||(22377960-22378086)
chr8 (1-127)||(22384135-22384261)
chr8 (1-127)||(22046521-22046647)
chr8 (1-120)||(20018257-20018376)
chr8 (1-115)||(19485377-19485491)
chr8 (1-115)||(22120681-22120795)
chr8 (1-117)||(22987359-22987475)
chr8 (39-127)||(15441329-15441417)
chr8 (1-115)||(20388259-20388373)
chr8 (4-127)||(20396635-20396758)
chr8 (1-118)||(21681977-21682094)
chr8 (125-183)||(22070106-22070164)
chr8 (1-118)||(20008007-20008124)
chr8 (127-183)||(21940573-21940629)
chr8 (231-423)||(38232380-38232570)
chr8 (1-120)||(20010407-20010526)
chr8 (127-183)||(6094031-6094087)
chr8 (127-183)||(22171396-22171452)
chr8 (30-118)||(23655084-23655172)
chr8 (127-179)||(24642556-24642608)
chr8 (30-120)||(19851566-19851656)
chr8 (30-120)||(19857602-19857692)
chr8 (249-410)||(32872857-32873019)
chr8 (3-120)||(22051018-22051135)
chr8 (127-183)||(28554791-28554847)
chr8 (51-118)||(804230-804297)
chr8 (51-118)||(14565299-14565366)
chr8 (3-118)||(16265127-16265242)
chr8 (240-298)||(2375027-2375085)
chr8 (1-118)||(6679268-6679385)
chr8 (65-118)||(27347383-27347436)
chr8 (1-118)||(28982514-28982631)
chr8 (1-118)||(28987734-28987851)
chr8 (2-118)||(21197010-21197126)
chr8 (257-320)||(10920234-10920297)
chr8 (30-120)||(21840572-21840662)
chr8 (1-118)||(6603815-6603932)
chr8 (1-118)||(16877602-16877719)
chr8 (1-118)||(21324916-21325033)
chr8 (1-118)||(21850844-21850961)
chr8 (29-118)||(29303961-29304050)
chr8 (30-118)||(1266396-1266484)
chr8 (33-109)||(19863223-19863299)
chr8 (33-109)||(19867860-19867936)
chr8 (51-118)||(20652890-20652957)
chr8 (30-120)||(31571378-31571468)
chr8 (29-118)||(12304915-12305004)
chr8 (29-118)||(22061968-22062057)
chr8 (1-102)||(22315364-22315465)
chr8 (127-164)||(24636605-24636642)
chr8 (30-118)||(31417010-31417098)
[»] chr2 (53 HSPs)
chr2 (219-426)||(21330248-21330455)
chr2 (219-426)||(18796506-18796713)
chr2 (1-127)||(21325870-21325996)
chr2 (1-127)||(24675202-24675328)
chr2 (1-127)||(22757067-22757193)
chr2 (1-127)||(23063790-23063916)
chr2 (1-120)||(24262090-24262209)
chr2 (1-120)||(16924980-16925099)
chr2 (1-120)||(16998720-16998839)
chr2 (6-125)||(24708091-24708210)
chr2 (1-120)||(24709753-24709872)
chr2 (1-127)||(23188721-23188847)
chr2 (221-426)||(18619807-18620011)
chr2 (1-120)||(9609856-9609975)
chr2 (1-120)||(16981872-16981991)
chr2 (1-120)||(17063437-17063556)
chr2 (1-120)||(17067095-17067214)
chr2 (1-120)||(27370989-27371108)
chr2 (1-127)||(23138750-23138876)
chr2 (1-127)||(23550540-23550666)
chr2 (1-120)||(10868570-10868689)
chr2 (28-127)||(27377102-27377201)
chr2 (225-364)||(19692598-19692737)
chr2 (1-120)||(21145634-21145753)
chr2 (1-120)||(22325460-22325579)
chr2 (1-120)||(24878599-24878718)
chr2 (1-120)||(27217736-27217855)
chr2 (1-120)||(44386173-44386292)
chr2 (2-127)||(24825887-24826012)
chr2 (284-411)||(20977957-20978084)
chr2 (1-127)||(23087163-23087289)
chr2 (1-127)||(30211521-30211647)
chr2 (124-183)||(21330493-21330552)
chr2 (253-426)||(36270199-36270373)
chr2 (253-426)||(18822115-18822290)
chr2 (1-127)||(45529230-45529350)
chr2 (1-118)||(27365683-27365800)
chr2 (1-118)||(11358478-11358595)
chr2 (1-118)||(23293680-23293797)
chr2 (1-118)||(31830380-31830497)
chr2 (1-118)||(22276001-22276118)
chr2 (1-118)||(24654067-24654184)
chr2 (1-118)||(1063473-1063590)
chr2 (1-118)||(12640523-12640640)
chr2 (1-118)||(20832707-20832824)
chr2 (1-118)||(24831791-24831908)
chr2 (51-102)||(23817747-23817798)
chr2 (51-118)||(24945089-24945156)
chr2 (51-102)||(28144701-28144752)
chr2 (51-100)||(25128387-25128436)
chr2 (390-426)||(12098618-12098654)
chr2 (127-183)||(19692773-19692829)
chr2 (255-410)||(36802664-36802820)
[»] scaffold0433 (2 HSPs)
scaffold0433 (219-426)||(7107-7314)
scaffold0433 (127-183)||(7015-7071)
[»] chr5 (81 HSPs)
chr5 (219-426)||(24695466-24695673)
chr5 (219-426)||(18569863-18570070)
chr5 (221-426)||(19714498-19714703)
chr5 (225-426)||(19707218-19707419)
chr5 (1-127)||(23573756-23573882)
chr5 (1-127)||(20798774-20798900)
chr5 (1-127)||(23516555-23516681)
chr5 (3-127)||(21984553-21984677)
chr5 (1-127)||(23440239-23440365)
chr5 (1-127)||(25423203-25423329)
chr5 (1-120)||(19769981-19770100)
chr5 (1-120)||(27685646-27685765)
chr5 (1-120)||(14999985-15000104)
chr5 (1-120)||(16356523-16356642)
chr5 (1-120)||(22333133-22333252)
chr5 (1-120)||(34566515-34566634)
chr5 (1-120)||(40708801-40708920)
chr5 (224-407)||(27347497-27347679)
chr5 (1-120)||(37291742-37291861)
chr5 (1-127)||(18775791-18775917)
chr5 (1-127)||(20468342-20468468)
chr5 (1-120)||(27610375-27610494)
chr5 (1-120)||(27668736-27668855)
chr5 (1-120)||(41770863-41770982)
chr5 (225-426)||(22547016-22547217)
chr5 (1-120)||(27518428-27518547)
chr5 (1-127)||(26738951-26739077)
chr5 (1-115)||(29476319-29476433)
chr5 (1-116)||(23471254-23471369)
chr5 (219-328)||(39537962-39538071)
chr5 (1-120)||(22134689-22134808)
chr5 (1-127)||(21498282-21498408)
chr5 (223-404)||(17285754-17285935)
chr5 (1-120)||(22348446-22348563)
chr5 (1-118)||(21564212-21564329)
chr5 (1-118)||(23442539-23442656)
chr5 (63-127)||(21343666-21343730)
chr5 (225-328)||(31886537-31886640)
chr5 (285-426)||(18807034-18807175)
chr5 (223-404)||(17298907-17299088)
chr5 (39-116)||(20573546-20573623)
chr5 (127-183)||(24695709-24695765)
chr5 (332-424)||(39538701-39538793)
chr5 (1-120)||(24735857-24735976)
chr5 (1-120)||(24737031-24737150)
chr5 (1-120)||(24749800-24749919)
chr5 (1-118)||(11210940-11211057)
chr5 (1-118)||(21891005-21891122)
chr5 (127-183)||(19714742-19714798)
chr5 (1-118)||(22461957-22462074)
chr5 (1-118)||(24798643-24798760)
chr5 (1-118)||(28895188-28895305)
chr5 (1-118)||(28924014-28924131)
chr5 (127-183)||(19707462-19707518)
chr5 (15-127)||(21662300-21662412)
chr5 (15-127)||(21665761-21665873)
chr5 (127-183)||(27347722-27347778)
chr5 (28-118)||(25848080-25848170)
chr5 (1-118)||(14887237-14887354)
chr5 (29-118)||(22502684-22502773)
chr5 (1-65)||(21339532-21339596)
chr5 (3-118)||(37545744-37545860)
chr5 (127-182)||(39537870-39537925)
chr5 (245-335)||(33477389-33477479)
chr5 (1-118)||(20342287-20342404)
chr5 (1-118)||(22236166-22236283)
chr5 (1-118)||(27011089-27011206)
chr5 (43-119)||(21404858-21404934)
chr5 (1-99)||(16065936-16066034)
chr5 (9-118)||(20821458-20821567)
chr5 (1-118)||(21937434-21937551)
chr5 (135-183)||(18570108-18570156)
chr5 (51-118)||(23080385-23080452)
chr5 (30-120)||(17269608-17269698)
chr5 (269-337)||(11479420-11479489)
chr5 (1-118)||(20773765-20773882)
chr5 (29-118)||(22381204-22381293)
chr5 (1-118)||(24581216-24581333)
chr5 (1-98)||(25244598-25244695)
chr5 (1-98)||(25308750-25308847)
chr5 (135-183)||(17285948-17285996)
[»] scaffold0657 (2 HSPs)
scaffold0657 (219-426)||(993-1200)
scaffold0657 (126-183)||(900-957)
[»] scaffold0186 (2 HSPs)
scaffold0186 (219-426)||(25990-26197)
scaffold0186 (127-182)||(26231-26286)
[»] scaffold0063 (2 HSPs)
scaffold0063 (221-426)||(5531-5736)
scaffold0063 (135-183)||(5444-5492)
[»] scaffold0008 (3 HSPs)
scaffold0008 (221-402)||(230365-230545)
scaffold0008 (127-183)||(230584-230640)
scaffold0008 (1-118)||(24002-24119)
[»] scaffold0042 (2 HSPs)
scaffold0042 (1-127)||(65518-65644)
scaffold0042 (69-127)||(39924-39982)
[»] scaffold1355 (1 HSPs)
scaffold1355 (1-127)||(789-915)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-127)||(127266-127392)
[»] scaffold0403 (1 HSPs)
scaffold0403 (1-127)||(6485-6611)
[»] scaffold0284 (1 HSPs)
scaffold0284 (1-127)||(21980-22106)
[»] scaffold0106 (2 HSPs)
scaffold0106 (1-127)||(14152-14278)
scaffold0106 (3-118)||(31532-31647)
[»] scaffold0005 (4 HSPs)
scaffold0005 (1-127)||(278897-279023)
scaffold0005 (1-127)||(164776-164902)
scaffold0005 (1-112)||(308787-308898)
scaffold0005 (30-120)||(260428-260518)
[»] scaffold0031 (1 HSPs)
scaffold0031 (5-116)||(64102-64213)
[»] scaffold0546 (1 HSPs)
scaffold0546 (1-127)||(4472-4598)
[»] scaffold0379 (1 HSPs)
scaffold0379 (1-127)||(13044-13170)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-127)||(761-886)
[»] scaffold0120 (3 HSPs)
scaffold0120 (1-127)||(6136-6262)
scaffold0120 (1-118)||(22816-22933)
scaffold0120 (1-118)||(1591-1708)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-127)||(8709-8835)
scaffold0109 (1-127)||(33640-33766)
[»] scaffold0091 (1 HSPs)
scaffold0091 (1-127)||(7903-8029)
[»] scaffold0044 (2 HSPs)
scaffold0044 (1-127)||(14473-14599)
scaffold0044 (1-120)||(740-859)
[»] scaffold0507 (2 HSPs)
scaffold0507 (1-127)||(9083-9209)
scaffold0507 (1-118)||(400-517)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-127)||(9456-9582)
[»] scaffold0413 (1 HSPs)
scaffold0413 (1-127)||(1118-1244)
[»] scaffold0012 (3 HSPs)
scaffold0012 (1-127)||(219484-219610)
scaffold0012 (1-125)||(229158-229282)
scaffold0012 (1-118)||(33062-33179)
[»] scaffold0894 (1 HSPs)
scaffold0894 (3-127)||(1252-1376)
[»] scaffold0737 (1 HSPs)
scaffold0737 (5-127)||(53-175)
[»] scaffold0676 (1 HSPs)
scaffold0676 (1-127)||(6127-6253)
[»] scaffold0333 (2 HSPs)
scaffold0333 (1-127)||(15605-15731)
scaffold0333 (1-63)||(15832-15894)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-127)||(3253-3379)
[»] scaffold0020 (1 HSPs)
scaffold0020 (1-127)||(180330-180456)
[»] scaffold0029 (3 HSPs)
scaffold0029 (1-120)||(109878-109997)
scaffold0029 (1-118)||(112681-112798)
scaffold0029 (1-118)||(96069-96186)
[»] scaffold0396 (1 HSPs)
scaffold0396 (1-127)||(4145-4271)
[»] scaffold0359 (1 HSPs)
scaffold0359 (1-127)||(17100-17226)
[»] scaffold0180 (1 HSPs)
scaffold0180 (1-127)||(32819-32945)
[»] scaffold0004 (5 HSPs)
scaffold0004 (1-127)||(112134-112260)
scaffold0004 (5-127)||(203539-203661)
scaffold0004 (1-118)||(322826-322943)
scaffold0004 (1-118)||(117690-117807)
scaffold0004 (30-120)||(385939-386029)
[»] scaffold0080 (1 HSPs)
scaffold0080 (2-115)||(7522-7635)
[»] scaffold0411 (1 HSPs)
scaffold0411 (1-117)||(15146-15262)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-120)||(534-653)
[»] scaffold0877 (1 HSPs)
scaffold0877 (9-127)||(335-453)
[»] scaffold0647 (1 HSPs)
scaffold0647 (1-127)||(1021-1147)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-127)||(5334-5460)
[»] scaffold0081 (1 HSPs)
scaffold0081 (5-127)||(49606-49728)
[»] scaffold0011 (5 HSPs)
scaffold0011 (1-127)||(26600-26726)
scaffold0011 (1-118)||(122017-122134)
scaffold0011 (34-118)||(148692-148776)
scaffold0011 (1-118)||(195770-195886)
scaffold0011 (69-118)||(68575-68624)
[»] scaffold0040 (1 HSPs)
scaffold0040 (2-127)||(14990-15115)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-120)||(7058-7178)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-120)||(7497-7616)
[»] scaffold0739 (1 HSPs)
scaffold0739 (1-127)||(115-241)
[»] scaffold0198 (1 HSPs)
scaffold0198 (1-127)||(28080-28206)
[»] scaffold0037 (2 HSPs)
scaffold0037 (1-127)||(116972-117098)
scaffold0037 (51-118)||(23583-23650)
[»] scaffold0001 (4 HSPs)
scaffold0001 (1-127)||(162226-162352)
scaffold0001 (1-127)||(448172-448298)
scaffold0001 (1-116)||(90999-91114)
scaffold0001 (1-118)||(78696-78813)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-126)||(16532-16657)
[»] scaffold0064 (2 HSPs)
scaffold0064 (1-118)||(28836-28953)
scaffold0064 (1-118)||(40827-40944)
[»] scaffold0058 (2 HSPs)
scaffold0058 (1-127)||(58473-58599)
scaffold0058 (1-102)||(74038-74139)
[»] scaffold0216 (1 HSPs)
scaffold0216 (1-120)||(847-966)
[»] scaffold0028 (5 HSPs)
scaffold0028 (1-120)||(8605-8724)
scaffold0028 (1-120)||(43274-43393)
scaffold0028 (15-118)||(50595-50698)
scaffold0028 (1-74)||(13832-13905)
scaffold0028 (5-118)||(106644-106757)
[»] scaffold0130 (1 HSPs)
scaffold0130 (1-127)||(10806-10932)
[»] scaffold0324 (1 HSPs)
scaffold0324 (55-127)||(17070-17142)
[»] scaffold0282 (1 HSPs)
scaffold0282 (1-127)||(16483-16609)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-127)||(86571-86697)
[»] scaffold0176 (2 HSPs)
scaffold0176 (219-283)||(8446-8510)
scaffold0176 (127-183)||(8546-8602)
[»] scaffold0600 (1 HSPs)
scaffold0600 (1-120)||(3995-4114)
[»] scaffold0730 (1 HSPs)
scaffold0730 (1-91)||(5658-5747)
[»] scaffold0192 (1 HSPs)
scaffold0192 (30-120)||(26262-26352)
[»] scaffold0924 (1 HSPs)
scaffold0924 (1-118)||(4013-4130)
[»] scaffold0751 (1 HSPs)
scaffold0751 (1-118)||(1916-2033)
[»] scaffold0193 (1 HSPs)
scaffold0193 (1-118)||(1236-1353)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-118)||(51930-52047)
[»] scaffold0203 (2 HSPs)
scaffold0203 (127-183)||(23769-23825)
scaffold0203 (1-118)||(14318-14435)
[»] scaffold0100 (1 HSPs)
scaffold0100 (5-105)||(25790-25890)
[»] scaffold0090 (2 HSPs)
scaffold0090 (1-120)||(18969-19088)
scaffold0090 (1-120)||(23131-23250)
[»] scaffold0076 (2 HSPs)
scaffold0076 (1-120)||(33744-33863)
scaffold0076 (1-118)||(40380-40497)
[»] scaffold0266 (1 HSPs)
scaffold0266 (30-120)||(14205-14295)
[»] scaffold0326 (3 HSPs)
scaffold0326 (1-118)||(18604-18721)
scaffold0326 (127-183)||(16523-16579)
scaffold0326 (219-252)||(16615-16648)
[»] scaffold0139 (2 HSPs)
scaffold0139 (1-118)||(27641-27758)
scaffold0139 (3-120)||(1218-1335)
[»] scaffold0523 (1 HSPs)
scaffold0523 (1-109)||(1-109)
[»] scaffold0165 (1 HSPs)
scaffold0165 (32-120)||(1297-1385)
[»] scaffold0585 (1 HSPs)
scaffold0585 (1-120)||(7103-7222)
[»] scaffold0483 (1 HSPs)
scaffold0483 (1-118)||(10150-10267)
[»] scaffold0298 (3 HSPs)
scaffold0298 (1-118)||(20105-20222)
scaffold0298 (1-118)||(13428-13545)
scaffold0298 (1-118)||(17198-17315)
[»] scaffold0108 (1 HSPs)
scaffold0108 (1-118)||(47246-47363)
[»] scaffold1124 (1 HSPs)
scaffold1124 (30-118)||(220-308)
[»] scaffold0309 (1 HSPs)
scaffold0309 (32-120)||(9918-10006)
[»] scaffold0026 (3 HSPs)
scaffold0026 (1-117)||(27404-27520)
scaffold0026 (1-117)||(38241-38357)
scaffold0026 (1-120)||(37322-37441)
[»] scaffold0023 (1 HSPs)
scaffold0023 (76-127)||(4567-4618)
[»] scaffold0348 (1 HSPs)
scaffold0348 (1-118)||(6305-6423)
[»] scaffold1710 (1 HSPs)
scaffold1710 (1-118)||(977-1094)
[»] scaffold0357 (1 HSPs)
scaffold0357 (1-102)||(14661-14762)
[»] scaffold0124 (3 HSPs)
scaffold0124 (1-118)||(7877-7994)
scaffold0124 (1-118)||(466-583)
scaffold0124 (1-118)||(11010-11127)
[»] scaffold0093 (1 HSPs)
scaffold0093 (29-118)||(26383-26472)
[»] scaffold0077 (1 HSPs)
scaffold0077 (1-118)||(28333-28450)
[»] scaffold0053 (2 HSPs)
scaffold0053 (1-118)||(49100-49217)
scaffold0053 (51-120)||(57933-58002)
[»] scaffold0705 (1 HSPs)
scaffold0705 (127-183)||(41-97)
[»] scaffold0637 (1 HSPs)
scaffold0637 (127-183)||(8944-9000)
[»] scaffold0574 (1 HSPs)
scaffold0574 (30-118)||(4235-4323)
[»] scaffold0071 (1 HSPs)
scaffold0071 (30-118)||(49303-49391)
[»] scaffold0034 (2 HSPs)
scaffold0034 (30-118)||(13997-14085)
scaffold0034 (1-118)||(5020-5137)
[»] scaffold0395 (1 HSPs)
scaffold0395 (1-120)||(5981-6100)
[»] scaffold0249 (1 HSPs)
scaffold0249 (1-120)||(5069-5188)
[»] scaffold0132 (1 HSPs)
scaffold0132 (3-118)||(14779-14894)
[»] scaffold0104 (1 HSPs)
scaffold0104 (1-120)||(648-767)
[»] scaffold0742 (1 HSPs)
scaffold0742 (3-120)||(5333-5450)
[»] scaffold0682 (1 HSPs)
scaffold0682 (1-118)||(313-430)
[»] scaffold0113 (2 HSPs)
scaffold0113 (29-118)||(16798-16887)
scaffold0113 (1-118)||(25932-26049)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-118)||(38954-39071)
[»] scaffold0066 (1 HSPs)
scaffold0066 (1-118)||(46276-46393)
[»] scaffold0767 (1 HSPs)
scaffold0767 (127-163)||(1-37)
[»] scaffold0035 (2 HSPs)
scaffold0035 (30-118)||(2873-2961)
scaffold0035 (1-103)||(13262-13364)
[»] scaffold0554 (1 HSPs)
scaffold0554 (51-118)||(3281-3348)
[»] scaffold0010 (3 HSPs)
scaffold0010 (60-127)||(2263-2330)
scaffold0010 (1-118)||(42400-42517)
scaffold0010 (1-118)||(47466-47583)
[»] scaffold0565 (2 HSPs)
scaffold0565 (129-183)||(10202-10256)
scaffold0565 (238-269)||(10127-10158)
[»] scaffold0808 (1 HSPs)
scaffold0808 (1-102)||(1121-1222)
[»] scaffold0761 (1 HSPs)
scaffold0761 (1-118)||(453-570)
[»] scaffold0447 (2 HSPs)
scaffold0447 (1-102)||(10493-10594)
scaffold0447 (1-102)||(5879-5980)
[»] scaffold0162 (1 HSPs)
scaffold0162 (1-118)||(13030-13147)
[»] scaffold0089 (1 HSPs)
scaffold0089 (1-118)||(16780-16897)
[»] scaffold0465 (1 HSPs)
scaffold0465 (1-85)||(1301-1385)
[»] scaffold0156 (1 HSPs)
scaffold0156 (30-118)||(27348-27436)
[»] scaffold0114 (1 HSPs)
scaffold0114 (30-118)||(20244-20332)
[»] scaffold0692 (1 HSPs)
scaffold0692 (51-118)||(3992-4059)
[»] scaffold0117 (1 HSPs)
scaffold0117 (51-118)||(10426-10493)
[»] scaffold0009 (1 HSPs)
scaffold0009 (51-118)||(248735-248802)
[»] scaffold0239 (1 HSPs)
scaffold0239 (30-120)||(12877-12967)
[»] scaffold0383 (1 HSPs)
scaffold0383 (1-102)||(8488-8589)
[»] scaffold0149 (1 HSPs)
scaffold0149 (61-118)||(13380-13437)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-118)||(39861-39978)
[»] scaffold0032 (1 HSPs)
scaffold0032 (248-320)||(92194-92267)
[»] scaffold0170 (1 HSPs)
scaffold0170 (127-179)||(5878-5930)
[»] scaffold0067 (3 HSPs)
scaffold0067 (30-118)||(52275-52363)
scaffold0067 (30-118)||(61309-61397)
scaffold0067 (30-118)||(67697-67785)
[»] scaffold0060 (1 HSPs)
scaffold0060 (66-118)||(42905-42957)


Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 105)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 6110064 - 6110271
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110064 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 6110163  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6110164 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6110263  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  6110264 ctgatgat 6110271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 10572799 - 10572592
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572799 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10572700  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10572699 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10572600  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  10572599 ctgatgat 10572592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 15601091 - 15600884
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15601091 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15600992  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15600991 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15600892  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  15600891 ctgatgat 15600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 15607636 - 15607429
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607636 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 15607537  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15607536 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 15607437  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  15607436 ctgatgat 15607429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 222 - 426
Target Start/End: Original strand, 13211305 - 13211509
Alignment:
Q  222 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 321  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13211305 aggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacc 13211404  T
Q  322 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactg 421  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13211405 ccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactg 13211504  T
Q  422 atgat 426  Q
    |||||    
T  13211505 atgat 13211509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 13248607 - 13248814
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13248607 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 13248706  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13248707 accccattaaacataaggaaactattctcaaagtattcgtagtcaagctttgttgagaagtgggataacattaaagcatagagactattatgtaggtaga 13248806  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  13248807 ctgatgat 13248814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 16482688 - 16482483
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482688 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16482589  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16482588 cccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16482489  T
Q  421 gatgat 426  Q
    ||||||    
T  16482488 gatgat 16482483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 17781319 - 17781118
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781319 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 17781220  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17781219 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 17781120  T
Q  425 at 426  Q
    ||    
T  17781119 at 17781118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 10579556 - 10579355
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  10579556 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgttaaatggaacattaagtataacttaattgtgagacccca 10579457  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  10579456 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgagatatcattaaagcatagagactattatgtaggtagactgatg 10579357  T
Q  425 at 426  Q
    ||    
T  10579356 at 10579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 18522665 - 18522870
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18522665 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18522764  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18522765 cccattaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcatttaagcatagagactattatgtaggtagact 18522864  T
Q  421 gatgat 426  Q
    ||||||    
T  18522865 gatgat 18522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 15357793 - 15357586
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  15357793 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgag 15357694  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15357693 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtaga 15357594  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  15357593 ctgatgat 15357586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 8490488 - 8490702
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8490488 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgag 8490587  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact-------attatgt 411  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       |||||||    
T  8490588 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactacagacgattatgt 8490687  T
Q  412 aggtagactgatgat 426  Q
    |||||||||||||||    
T  8490688 aggtagactgatgat 8490702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 18519980 - 18520182
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18519980 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18520079  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||| ||   ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18520080 cccgttaaacataaggaaactattcttaa---atccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18520176  T
Q  421 gatgat 426  Q
    ||||||    
T  18520177 gatgat 18520182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 19089946 - 19089745
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||     
T  19089946 catttctttattgattttgttttgtttcaaaataataaagtccctagattagttagtccgtttaatggaacattaagtataacttaattgtgagacccct 19089847  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  19089846 ttaaacataatgaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaatcatagagactattatgtaggtagactgatg 19089747  T
Q  425 at 426  Q
    ||    
T  19089746 at 19089745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 17200389 - 17200184
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  17200389 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgatac 17200290  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17200289 ccctttaaacataatgaaactattcttaaagtatccgtagttaagctttattgagatgtgtgatatcattaaagcatagagactattatgtgggtagact 17200190  T
Q  421 gatgat 426  Q
    ||||||    
T  17200189 gatgat 17200184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 238 - 426
Target Start/End: Complemental strand, 15342407 - 15342219
Alignment:
Q  238 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 337  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15342407 attttgttttgtttcaaaataataaagtccctagaatagtttgttcgtttaatggaacattaagtataacttaattgtgagaccccattaaacataagga 15342308  T
Q  338 aactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15342307 acctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtaggtagactgatgat 15342219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 13516813 - 13517018
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  13516813 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttcatggaacattaagtataacttaattgtgagac 13516912  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||| ||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||    
T  13516913 cccgttaaacataaggaaacgattcttaaagtatctgtagtcaagctttattgagaagtaggatatcattaaagcacagagactattatgtgggtagact 13517012  T
Q  421 gatgat 426  Q
    ||||||    
T  13517013 gatgat 13517018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 219 - 380
Target Start/End: Complemental strand, 18640953 - 18640792
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18640953 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 18640854  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtg 380  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18640853 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtg 18640792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 32057101 - 32056900
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||     
T  32057101 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacatcaagtataactttattgtaagaccccg 32057002  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||| ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||    
T  32057001 ttaaacataaagaaactattcttaaagtgtccgtagtcaaactttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactaatg 32056902  T
Q  425 at 426  Q
    ||    
T  32056901 at 32056900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 1647726 - 1647521
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataa----cttaattgtgagac 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    ||||||||||||||    
T  1647726 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataattaacttaattgtgagac 1647627  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||| | |||||||||||| ||||||||| |||||||  ||||||| |||||||||||||||||||||||| | ||||||    
T  1647626 cccgttaaacataaggaaactatttttaaagtatccgtaatcaagctttattgagaaaagggatataattaaagcatagagactattatgtggatagact 1647527  T
Q  421 gatgat 426  Q
    ||||||    
T  1647526 gatgat 1647521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 221 - 407
Target Start/End: Original strand, 16200128 - 16200313
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  16200128 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagttcgtttaatggaacattatgtataacttaattgtgagac 16200226  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 407  Q
    ||||||||||||||||| | |||||| ||||||| |||||||||| ||| ||| ||||||||||||||||||||||| |||||||||    
T  16200227 cccattaaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatatcattaaagcatggagactatt 16200313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 219 - 411
Target Start/End: Original strand, 29924971 - 29925163
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29924971 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29925070  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 411  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29925071 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29925163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 219 - 411
Target Start/End: Original strand, 29974124 - 29974316
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29974124 acaagacatttctttattgattttgttttgtttcaaaataataaagcccctaaaatagttagtccgtttaatggattattaagtataatttaattgtgag 29974223  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 411  Q
    ||||||||||| ||||||| | |||||| ||| |||  ||||||||||||| ||| |||||| |||||||||||||||| ||| |||||||||    
T  29974224 accccattaaatataaggacattattcttaaaatatatgtagtcaagctttattgtgaagtgagatatcattaaagcatggaggctattatgt 29974316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12498075 - 12497949
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12498075 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 12497976  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  12497975 gtcaaagaagttgactccgagatttat 12497949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17489677 - 17489551
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17489677 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 17489578  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  17489577 gtcaaagaagttgactccgagatttat 17489551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 221 - 407
Target Start/End: Original strand, 16200434 - 16200619
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||  ||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16200434 aaggcatttcttcgttg-ttttattttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattatgtataacttaattgtgagac 16200532  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 407  Q
     ||| |||||||||||| | |||||| ||||||| |||||||||| ||| ||| |||||||||| ||||||||||||  ||||||||    
T  16200533 tccaataaacataaggacattattcttaaagtattcgtagtcaagatttattgtgaagtgggatgtcattaaagcatgaagactatt 16200619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16492484 - 16492610
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||    
T  16492484 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgagctttaaa 16492583  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  16492584 gtcaaagaagttgactccgagatttat 16492610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14876802 - 14876928
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | |||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  14876802 agagttatcatgataagcgtagaaaagaccttgagtttcaagaaggagaccacgtgtttttgagagttactcctgtgactggtgttggacgtgctttgaa 14876901  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  14876902 gtcaaagaagttgactccgagatttat 14876928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9522546 - 9522420
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||| ||| ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  9522546 agagttaccatgataagcgtagaaaagatcttgactttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgagctttgaa 9522447  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  9522446 gtcaaagaagttgactccgagatttat 9522420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16371240 - 16371114
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||| || ||||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16371240 agagttatcatgataagcgtaggaaagatcttgaatttcaagaagaagactacgtgtttttgagagtcactcctgtgactggtgttggatgtgctttgaa 16371141  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  16371140 gtcaaagaagttgactccgagatttat 16371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 15348548 - 15348667
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15348548 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 15348647  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15348648 gtcaaagaagttgaccccga 15348667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 16691987 - 16691861
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| | |||  |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  16691987 agagttatcatgataagcgcaagaaggatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaa 16691888  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  16691887 gtcaaagaagttgactccgagatttat 16691861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 226 - 426
Target Start/End: Complemental strand, 24253589 - 24253388
Alignment:
Q  226 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-cccca 324  Q
    ||||||||||||||||||||||  |||||||||||||||||| |||||||| | || ||||| |||||||||||||||| ||||||| |||||| |||||    
T  24253589 atttctttattgattttgttttacttcaaaataataaagtccttagaatagctcgttcgtttgatggaacattaagtatgacttaatcgtgagatcccca 24253490  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    | ||||||||||| |||||||| |||||||  || |||||  ||| |||  ||||| | || ||||||||||||||||||||||||| |||||||| |||    
T  24253489 tcaaacataaggacactattcttaaagtatatgtggtcaaaatttattgtaaagtgaggtaacattaaagcatagagactattatgtcggtagactaatg 24253390  T
Q  425 at 426  Q
    ||    
T  24253389 at 24253388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16635600 - 16635481
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  16635600 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 16635501  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16635500 gtcaaagaagttgaccccga 16635481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26792702 - 26792821
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||||||| ||||| |||| ||||||||||||||    
T  26792702 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttaagagtcactcctatgactagtgtaggacgtgctttgaa 26792801  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  26792802 gtcaaagaagttgaccccga 26792821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43162924 - 43162805
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  43162924 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 43162825  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  43162824 gtcaaagaagttgaccccga 43162805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48425274 - 48425155
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  48425274 agagttatcatgataagcgtagaaaagatcttgaattccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 48425175  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  48425174 gtcaaagaagttgaccccga 48425155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 16807233 - 16807353
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    ||||||||||||||| || ||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  16807233 ttatcatgataagcgcagaaaggatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggatgtgctttgaagtca 16807332  T
Q  105 aagaagttgactccgagattt 125  Q
    ||||||||||||| |||||||    
T  16807333 aagaagttgactctgagattt 16807353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10906037 - 10905918
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10906037 agagttatcatgataagcgtagaaaagatcttgaatttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 10905938  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  10905937 gtcaaagaagttgaccccga 10905918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15208718 - 15208592
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |  ||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  15208718 agagttatcatgataagcgtaggaaaaacattgagtttcaagaaggagatcatgtatttttgagagtcactcctgtgactggtgttggacgcgcattgaa 15208619  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || |||||||||||||||||| |||||    
T  15208618 gtaaaagaagttgactccgaggtttat 15208592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 325 - 426
Target Start/End: Original strand, 17136465 - 17136566
Alignment:
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  17136465 ttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaaacatagagactattatgtgggtagactgatg 17136564  T
Q  425 at 426  Q
    ||    
T  17136565 at 17136566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 15247974 - 15247854
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |   |||||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  15247974 agagttatcatgataagcgtaggaaaaacaatgagtttcaagaaggagatcatgtatttttgagagtcactcctgtgactggtgttggacgcgcattgaa 15247875  T
Q  101 gtcaaagaagttgactccgag 121  Q
    |||||||||||||||||||||    
T  15247874 gtcaaagaagttgactccgag 15247854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 6600574 - 6600455
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||| | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  6600574 agagttatcatgataagcgtagaaaagatcttgaattcaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 6600475  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  6600474 gtcaaagaagttgaccccga 6600455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10005427 - 10005308
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10005427 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 10005328  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  10005327 gtcaaagaagttgaccccga 10005308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13252517 - 13252398
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  13252517 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 13252418  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  13252417 gtcaaagaagttgaccccga 13252398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 15589695 - 15589814
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15589695 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 15589794  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15589795 gtcaaagaagttgaccccga 15589814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16412585 - 16412704
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||  | |||||||| || ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||    
T  16412585 agagttatcatgataagcgtaggaatgaccttgagtttcatgaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16412684  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16412685 gtcaaagaagttgaccccga 16412704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20062357 - 20062476
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  20062357 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggcgtaggacgtgctttgaa 20062456  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  20062457 gtcaaagaagttgaccccga 20062476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 53385321 - 53385440
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  53385321 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctgtgactggtgtaggacgtgctttgaa 53385420  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| || |||||||| ||||    
T  53385421 gtcgaaaaagttgaccccga 53385440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15227486 - 15227367
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  15227486 agagttatcatgacaagcgtagaaaggatcttgagtttcaagaaggagaccatgtgtttttgagagtcactcctgtgacaggtgttggtcgtgccttgaa 15227387  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||| ||||    
T  15227386 atcgaagaagttgacgccga 15227367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15339096 - 15338977
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||||| ||| ||||||||||  | ||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  15339096 agagttatcacgataagcgtagaaaagatcttgagttttaggaaggagaccacgtgtttttgagagtcactcctatgactggcgtaggacgtgctttgaa 15338997  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15338996 gtcaaagaagttgaccccga 15338977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 15402813 - 15402932
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||||| ||| || ||||||| || ||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||    
T  15402813 agagttatcacgataagcgtagaaaagattttgagtttcaggaaggagaccacgtgtttttgagagtcactcctatgactggcgtaggacgtgctttgaa 15402912  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15402913 gtcaaagaagttgaccccga 15402932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 15725236 - 15725355
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| |||||||| |||||||||||| |||| ||||| |||||||| |||||    
T  15725236 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtgttttttagagtcactcctatgacgggtgtaggacgtgcattgaa 15725335  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15725336 gtcaaagaagttgaccccga 15725355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16756888 - 16757007
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||  | |||||||||||  |||||||||||||||||||| |||||||||| ||||||||||||||    
T  16756888 agagttatcatgataagcgtagaaaagatcttgaatttaaggaaggagaccacatgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16756987  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||| ||||    
T  16756988 gtcgaagaagttgaccccga 16757007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5425233 - 5425351
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | ||||| || || ||||||||||| ||| ||| ||||||||||||| |||||||||| ||||||||||||||    
T  5425233 agagttatcatgataagcgtagaaaagaccttgaatttcaggaaggagaccacgtgcttt-gagagtcactcctatgactggtgtaggacgtgctttgaa 5425331  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  5425332 gtcaaagaagttgaccccga 5425351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 15016047 - 15016135
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttgga 89  Q
    |||||||||||||||||||||||||  |||||||||| |||||||||||||| || ||||||||||||||||||||||| |||||||||    
T  15016047 agagttatcatgataagcgtaggaaggatcttgagtttcaagaaggagaccacgtatttttgagagtcactcctgtgaccggtgttgga 15016135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 221 - 283
Target Start/End: Original strand, 18534758 - 18534820
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18534758 aaggcatttctttattgattttgttttgtttcaaaataataaagtccatagaatagttagtcc 18534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13322944 - 13323061
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| |||||| ||| || || ||||||||||||||| ||||||| |||||| |||| || || |||||||| |||||    
T  13322944 agagctatcatgacaagcgtaggaaagatcttgggtttcaggagggagaccatgtgtttctgagagttactcctatgacgggggtaggacgtgcattgaa 13323043  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  13323044 gtcgaagaagttgactcc 13323061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 6109972 - 6110028
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6109972 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 6110028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8490396 - 8490452
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  8490396 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 8490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 13248515 - 13248571
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13248515 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 13248571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 13972412 - 13972531
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  13972412 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgcattaaa 13972511  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  13972512 atctaagaagttgactccga 13972531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14086510 - 14086391
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  14086510 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgcattaaa 14086411  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  14086410 atctaagaagttgactccga 14086391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14571685 - 14571568
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| | ||| |||||||||||    |||||||| ||||| ||||| ||||||||||||||||| |||||| |||| ||||| |||||||| |||||    
T  14571685 agagttaccgtgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttttgagagttactcctatgacgggtgtaggacgtgcattgaa 14571586  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||| ||||||||    
T  14571585 gtctaagaatttgactcc 14571568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 13211211 - 13211267
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  13211211 tgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 13211267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 18641045 - 18640989
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  18641045 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 18640989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 12850600 - 12850690
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| | ||| ||||||||| ||||||||||||||||||| ||| | || ||||| |||||||| ||||||||||||||||    
T  12850600 cttgagtttcaagaggaagatcatgtgtttctgagagtcactcctgtgacgggtataggtcgtgcgttgaagtctaagaagttgactccga 12850690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 221 - 266
Target Start/End: Original strand, 18510924 - 18510969
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 266  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18510924 aaggcatttctttattgattttgttttgtttcaaaataataaagtc 18510969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 17136137 - 17136193
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  17136137 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 17136193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 10579653 - 10579611
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggttt 169  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10579653 tgttggaataagccctaatagccaatctatattgattgggttt 10579611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 15607729 - 15607672
Alignment:
Q  127 tgttggaataagccctaatagccaatctata-ttgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||| || ||||||||| |||||||||||||    
T  15607729 tgttggaataagccctaatagccaatctatattttattgggtttggctttgtatcatg 15607672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15953260 - 15953377
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||| ||| ||||| | |||||| |||| |||||  ||||||| |||||    
T  15953260 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtatttctgagatttactcctatgacgggtgtacgacgtgcattgaa 15953359  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  15953360 gtctaagaagttgactcc 15953377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18134638 - 18134755
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || | ||| ||| ||||||| |||||| |||||||||| |||||||| |||||    
T  18134638 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcttgtatttctgagagttactcctatgactggtgtaggacgtgccttgaa 18134737  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  18134738 gtcgaggaagttgactcc 18134755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 47123781 - 47123664
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  ||||||| || || || || || ||||| ||| |||||||||||||| |||| ||||||||||| ||||||||    
T  47123781 agagttaccatgacaagcgaagaaaggatcttgaatttcaggagggtgatcatgtttttctgagagtcactcctttgacgggtgttggacgggctttgaa 47123682  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  47123681 gtcgaggaagttgactcc 47123664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 15351293 - 15351237
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  15351293 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15351237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 15357885 - 15357829
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  15357885 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 15357829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 16482782 - 16482727
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  16482782 tgttagaataagccctaata-ccaatctatattgattgggtttggctttgtatcatg 16482727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 17200483 - 17200427
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||||| ||||    
T  17200483 tgttggagtaagccctaatagccaatctatgttgattgggtttggctttgtagcatg 17200427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18519885 - 18519941
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||| |||||||||||||||||||||||||||||| | |||||||||||    
T  18519885 tgttggagtaagtcctaatagccaatctatattgattgggtttggttttgtatcatg 18519941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 10572890 - 10572848
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggttt 169  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  10572890 tgttggaataagccctaatagccaacctatattgattgggttt 10572848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 1647825 - 1647768
Alignment:
Q  126 atgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||| ||||||||||||||   |||||||||||||||||| |||||||||||||    
T  1647825 atgttggagtaagccctaatagctggtctatattgattgggtttggctttgtatcatg 1647768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8274702 - 8274819
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||||||    
T  8274702 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttgaa 8274801  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  8274802 gtgtaggaagttgactcc 8274819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 10420345 - 10420454
Alignment:
Q  9 catgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaaga 108  Q
    ||||| |||||||||||| | ||||| || || ||||| || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||||| | ||    
T  10420345 catgacaagcgtaggaaagaccttgaatttcaggaaggtgatcatgtttttctgagggttactcctatgacaggtgtaggacgtgcattgaagtcgagga 10420444  T
Q  109 agttgactcc 118  Q
    ||||||||||    
T  10420445 agttgactcc 10420454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 15601184 - 15601127
Alignment:
Q  127 tgttggaataagccctaatagccaatctata-ttgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||| || ||||||||| | |||||||||||    
T  15601184 tgttggaataagccctaatagccaatctatattttattgggtttggatttgtatcatg 15601127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 16836804 - 16836921
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||||||||| |||||    |||||||| || || || || ||||| ||||||||||| |||||  |||| ||||| |||||||||||||| |    
T  16836804 agttaccatgataagcggaggaaggcccttgagtttcaggagggtgatcatgtatttttgagagttactccgatgacgggtgtaggacgtgctttgaaat 16836903  T
Q  103 caaagaagttgactccga 120  Q
    | | ||||||||||||||    
T  16836904 cgaggaagttgactccga 16836921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 18748502 - 18748401
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |  ||||||| ||||  || || ||||||||||| ||||| |  ||||| |||||||||||||||||||||||    
T  18748502 agagttatcatgataagaggaggaagaacattgagtttcaagttggtgatcatgtgtttttaagagtgaaccctgtaactggtgttggacgtgctttgaa 18748403  T
Q  101 gt 102  Q
    ||    
T  18748402 gt 18748401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 13516719 - 13516775
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||| ||||||| |||| ||| |||||||||    
T  13516719 tgttggagtaagccctaatagccaatctatgttgattgagtttggctgtgtatcatg 13516775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 17781414 - 17781358
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| | ||| |||||||    
T  17781414 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 17781358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19090041 - 19089985
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| | ||| |||||||    
T  19090041 tgttggagtaagccctaatagccaatctatattgattgagtttggttttatatcatg 19089985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 32057200 - 32057144
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||  ||||||||||||    
T  32057200 tgttggagtaagctctaatagccaatctatgttgattgggtttgactttgtatcatg 32057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 44777055 - 44776965
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||||||||| || || ||||| ||| | |||||||||||  |||| ||||| |||||||||||||| || | |||||| |||||||    
T  44777055 cttgagttccaagagggtgatcatgtatttctaagagtcactccgatgacaggtgtaggacgtgctttgaaatcgaggaagttaactccga 44776965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 10383806 - 10383689
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||| || |||||||||||    
T  10383806 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgtcggtcgtgctttgaa 10383707  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  10383706 gtcgagaaagttgactcc 10383689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 16329979 - 16330068
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||||||||| |||||||| | | ||||||||||    
T  16329979 tcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacaggtgttggacgtgcattgaagtcgaggtagttgactcc 16330068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16743006 - 16743123
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||  ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||||||    
T  16743006 agagttatcatgataagaggagaaaggatattgagtgtcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttgaa 16743105  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  16743106 gtgtaggaagttgactcc 16743123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18510829 - 18510885
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||   |||||||||||    
T  18510829 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18510885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18522570 - 18522626
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||   |||||||||||    
T  18522570 tgttggagtaagccctaatatccaatctatattgattgagtttgattttgtatcatg 18522626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 18534671 - 18534719
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||| |||||||||||||||| |||| | |||||||||||    
T  18534671 taagccctaatagtcaatctatattgattgagtttggttttgtatcatg 18534719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 15576537 - 15576470
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||||||||| || | ||||||||| || ||||| |||||||||||||  | ||||||||||||    
T  15576537 catgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttgaagtgtaggaagttgactcc 15576470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 8759403 - 8759493
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| || || ||||| ||| | ||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  8759403 cttgagtttcaagagggtgatcatgtatttctaagagtgactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 8759493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11304065 - 11304182
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||||| |||   ||||||||| ||||| || || ||||| ||| |||||||    ||| |||| ||||| |||||||| |||||    
T  11304065 agagttaccatgacaagcgtatgaaggctcttgagtttcaagagggtgatcatgtatttctgagagttttccctatgacaggtgtaggacgtgcattgaa 11304164  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  11304165 gtcgaggaagttgactcc 11304182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12360834 - 12360951
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| ||||||| ||| || ||||  |||| |||||||| |||||    
T  12360834 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagagttacttctatgacatgtgtaggacgtgcattgaa 12360933  T
Q  101 gtcaaagaagttgactcc 118  Q
     || | ||||||||||||    
T  12360934 atcgaggaagttgactcc 12360951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13975348 - 13975465
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||| ||||||    
T  13975348 agagctatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgttttgaa 13975447  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  13975448 gtgtaggaagttgactcc 13975465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 16381269 - 16381338
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    ||||| ||||| ||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  16381269 catgtatttttaagagttactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 16381338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29924879 - 29924935
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  29924879 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29924935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29974032 - 29974088
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||| | |||||||||||||| ||||  | ||||||||||    
T  29974032 tgttggagtaagccctaatagtcgatctatattgattgagtttgacattgtatcatg 29974088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 204; Significance: 1e-111; HSPs: 6)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 2528 - 2321
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2528 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 2429  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  2428 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 2329  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  2328 ctgatgat 2321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 11419 - 11212
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11419 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 11320  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11220  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  11219 ctgatgat 11212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 25142 - 25252
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||| || || ||||||||| ||||||| || |||| |||||||||||||||| | ||||||||||||||||| |||||||| ||||||||||| ||     
T  25142 ttatcacgacaaacgtaggaaagatcttgaatttcaagcaggagaccatgtgtttctaagagtcactcctgtgacaggtgttggtcgtgctttgaaatcg 25241  T
Q  105 aagaagttgac 115  Q
    |||||||||||    
T  25242 aagaagttgac 25252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 2620 - 2564
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  2620 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 2564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 11511 - 11455
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11511 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16238 - 16355
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || | || || ||||  || || ||||||||||| || || | ||||||||| |||||| | |||||||||||    
T  16238 agagttatcatgataagaggaggaaggatatagactttcaagttggggatcatgtgtttttaagggtgaatcctgtgaccggtgtttgtcgtgctttgaa 16337  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  16338 gtgtaggaagttgactcc 16355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 19926967 - 19926760
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926967 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 19926868  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19926867 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 19926768  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  19926767 ctgatgat 19926760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 26970463 - 26970670
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970463 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 26970562  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26970563 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26970662  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  26970663 ctgatgat 26970670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 55612683 - 55612890
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612683 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 55612782  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  55612783 accccattaaacataaggaaactactctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 55612882  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  55612883 ctgatgat 55612890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 868597 - 868804
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  868597 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 868696  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  868697 accccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 868796  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  868797 ctgatgat 868804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 5707320 - 5707527
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  5707320 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 5707419  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5707420 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5707519  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  5707520 ctgatgat 5707527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 26963640 - 26963847
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26963640 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaaatataacttaattgtgag 26963739  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26963740 accccattaaacataaggaaactattctcaaagtatccgtagtcaagatttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 26963839  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  26963840 ctgatgat 26963847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 18262214 - 18262419
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262214 aaggcatttctttattgattttgtttcgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 18262313  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18262314 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 18262413  T
Q  421 gatgat 426  Q
    ||||||    
T  18262414 gatgat 18262419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 5713948 - 5714155
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  5713948 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagcccatttaatggaacattaagtataacttaattgtgag 5714047  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  5714048 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtaggtaga 5714147  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  5714148 ctgatgat 5714155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 10621540 - 10621333
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621540 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10621441  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10621440 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 10621341  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  10621340 ctgatgat 10621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 10628619 - 10628412
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10628619 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctggaatagttagtccgtttaatggaacattaagtataacttaattgtgag 10628520  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    | ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  10628519 agcccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatattattaaagcatagagactattatgtaggtaga 10628420  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  10628419 ctgatgat 10628412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 18269070 - 18269280
Alignment:
Q  221 aaggcatttctttattgatttt-----gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 315  Q
    ||||||||||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18269070 aaggcatttctttattgattttgttttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgt 18269169  T
Q  316 gagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggt 415  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18269170 gagaccccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggt 18269269  T
Q  416 agactgatgat 426  Q
    |||||||||||    
T  18269270 agactgatgat 18269280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 28393339 - 28393134
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28393339 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28393240  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28393239 cccattaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 28393140  T
Q  421 gatgat 426  Q
    ||||||    
T  28393139 gatgat 28393134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 4426808 - 4426604
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4426808 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 4426709  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4426708 cccgttaaacataagg-aactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagact 4426610  T
Q  421 gatgat 426  Q
    ||||||    
T  4426609 gatgat 4426604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 231 - 426
Target Start/End: Original strand, 8845215 - 8845410
Alignment:
Q  231 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8845215 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8845314  T
Q  331 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8845315 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8845410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 231 - 426
Target Start/End: Original strand, 8858179 - 8858374
Alignment:
Q  231 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 330  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  8858179 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagatcccgttaaac 8858278  T
Q  331 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||| ||||||||    
T  8858279 ataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtcggatatcattaaagcatagagactattatgtgggtaggctgatgat 8858374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 219 - 334
Target Start/End: Original strand, 12357136 - 12357251
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12357136 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 12357235  T
Q  319 accccattaaacataa 334  Q
    ||||||||||||||||    
T  12357236 accccattaaacataa 12357251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15149810 - 15149936
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15149810 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 15149909  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||| |||||||||    
T  15149910 gtcaaagaagttgactctgagatttat 15149936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 227 - 426
Target Start/End: Original strand, 20311299 - 20311499
Alignment:
Q  227 tttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaag-tataacttaattgtgagaccccat 325  Q
    ||||||||||||||||||||||||| ||||||||||||| | || |||||||| |  ||| |||||| ||||||| ||||||||||||||||||||||||    
T  20311299 tttctttattgattttgttttgttttaaaataataaagtacttataatagttaatatgttcaatggagcattaaggtataacttaattgtgagaccccat 20311398  T
Q  326 taaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 425  Q
    |||||||||||| ||| || | |||||||  || |||||||||| ||| |||||| |||||||||||||||||||||||||| ||| |||||| ||||||    
T  20311399 taaacataaggacactgtttttaaagtatttgttgtcaagctttattgtgaagtgagatatcattaaagcatagagactattttgtgggtagattgatga 20311498  T
Q  426 t 426  Q
    |    
T  20311499 t 20311499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16252249 - 16252375
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  16252249 agagttatcatgataagcgcaggaaggatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcttgtgactggtgttggacgtgctttgaa 16252348  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  16252349 gtcaaagaagttgactccgagatttat 16252375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27711544 - 27711425
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  27711544 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgtaggacgtgctttgaa 27711445  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27711444 gtcaaagaagttgaccccga 27711425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 16355253 - 16355375
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    ||||||||||||||| |||||| ||||||| || ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16355253 ttatcatgataagcgcaggaaagatcttgaatttcaagaaggaaaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 16355352  T
Q  105 aagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||    
T  16355353 aagaagttgactccgagatttat 16355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12476808 - 12476689
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  12476808 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 12476709  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  12476708 gtcaaagaagttgaccccga 12476689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18297413 - 18297294
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  18297413 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 18297314  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  18297313 gtcaaagaagttgaccccga 18297294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19778597 - 19778716
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19778597 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 19778696  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  19778697 gtcaaagaagttgaccccga 19778716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23955955 - 23955836
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23955955 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 23955856  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  23955855 gtcaaagaagttgaccccga 23955836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 7090640 - 7090514
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||| ||| |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||| | ||||||||    
T  7090640 agagttaccatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtatttttgagagtcactcctgtgactggtgttggatgagctttgaa 7090541  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  7090540 gtcaaagaagttgactccgagatttat 7090514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29039208 - 29039327
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  29039208 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 29039307  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  29039308 gtcaaagaagttgaccccga 29039327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14652516 - 14652390
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| || || |||||||||||||||| ||||||||||||||||||||| |||||    
T  14652516 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagatcacgtatttttgagagtcactcatgtgactggtgttggacgtgcattgaa 14652417  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||| |||| |||||    
T  14652416 gtcaaagaagttgacttcgaggtttat 14652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18227250 - 18227376
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||    
T  18227250 agagttatcatgataagcgcaggaagaatcttgagtttcaggaaggagagcacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaa 18227349  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||| |||||||||    
T  18227350 gtcaaagaagttgactctgagatttat 18227376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12523884 - 12523765
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  12523884 agagttatcatgataaccgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgcattgaa 12523785  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  12523784 gtcaaagaagttgaccccga 12523765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 14303782 - 14303896
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  14303782 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 14303881  T
Q  101 gtcaaagaagttgac 115  Q
    |||||||||||||||    
T  14303882 gtcaaagaagttgac 14303896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8386620 - 8386501
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8386620 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 8386521  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  8386520 gtcaaagaagttgaccccga 8386501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14851170 - 14851296
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| ||||| |||||||||| |||||| |||||||||||||| |||||    
T  14851170 agagttatcatgataagcgtaggaaaaaccttgagtttcaagaaggagatcatgtattttttagagtcactcatgtgaccggtgttggacgtgcattgaa 14851269  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||| |||||||| |||||    
T  14851270 gtcaaagaagttaactccgaggtttat 14851296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40473248 - 40473129
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||    
T  40473248 agagttatcacgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaa 40473149  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  40473148 gtcaaagaagttgaccccga 40473129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14680775 - 14680649
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || ||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  14680775 agagttatcatgataagcgcaggaaggatcttgagtttcaggaacgagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgcattgaa 14680676  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||| |||||||| |||||||||||    
T  14680675 gtcaaataagttgaccccgagatttat 14680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 8053427 - 8053546
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||||| | | ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8053427 agagttatcacgataagcgtagaagagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 8053526  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  8053527 gtcaaagaagttgaccccga 8053546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14266703 - 14266822
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || |||||||||||  |||||||||||||||| ||| ||||||||||  |||||||||||||    
T  14266703 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacatgtttttgagagtcacccctatgactggtgtatgacgtgctttgaa 14266802  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  14266803 gtcaaagaagttgaccccga 14266822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 10677753 - 10677555
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10677753 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10677655  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10677654 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10677557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 10891393 - 10891195
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||| |||||||||||| ||||||||||| | ||||||| ||||| |||| |||||| || ||||||| |||||||||| ||||||| | |||| ||||    
T  10891393 catttttttattgattttcttttgtttcaataaaataaagcccctaaaataattagtctgtataatggagcattaagtatgacttaatcgcgaga-ccca 10891295  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    ||||||  || || | |||||| |||||||||||||||||||||  | | ||| || |||| |||||||| ||| |||||||||||| ||||||||||||    
T  10891294 ttaaacgaaatgatattattcttaaagtatccgtagtcaagctt--tagtgaaatgagataacattaaagtatatagactattatgtgggtagactgatg 10891197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 5668327 - 5668125
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||  ||||||||| |||||||| | | ||||| |||||| ||||    
T  5668327 catttctttgttgattttgttttgtttcaaaataataaagtctctagaataattagtctatttaatggagcattaagtgtgatttaatcgtgaga-ccca 5668229  T
Q  325 ttaaacataaggaaactattctcaaag--tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 422  Q
    |||||   ||||| | |||||| ||||  |||  ||||||||||||| ||| |||  | |||| ||||||| ||||||||||||||||| | ||||| ||    
T  5668228 ttaaatgaaaggacattattcttaaagtatatttgtagtcaagctttattgtgaaaagagataacattaaatcatagagactattatgtggatagaccga 5668129  T
Q  423 tgat 426  Q
    ||||    
T  5668128 tgat 5668125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 15364583 - 15364475
Alignment:
Q  12 gataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagt 111  Q
    ||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||    
T  15364583 gataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaagtcaaagaagt 15364484  T
Q  112 tgactccga 120  Q
    |||| ||||    
T  15364483 tgaccccga 15364475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14159700 - 14159574
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || |||| |||||| ||||||||  ||||||| |||||  ||||||||||||||||||| |||||    
T  14159700 agagttatcatgataagcgtagaaaagatcttgaatttcaaggaggagatcatgtgttcctgagagttactcccatgactggtgttggacgtgcattgaa 14159601  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||| ||||| |||||    
T  14159600 gtcaaagaagttgaccccgaggtttat 14159574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 221 - 425
Target Start/End: Original strand, 5616215 - 5616421
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||| |||||||||||||||||||||||||||| |||| |||| ||||||  |||  ||||||||||||| | ||| |||  |||||     
T  5616215 aaggcatttctttattcattttgttttgtttcaaaataataaagttcctaaaataattagtctatttcttggaacattaagtctgactaaatcatgagat 5616314  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaa--gctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||| ||||||   |||| | |||||| ||||||||||| |||||  | ||| ||  ||| |||||||| | |||||||| |||||||||||||| |||||    
T  5616315 cccgttaaactagaggacattattcttaaagtatccgttgtcaaaggttttattatgaattgggatattaataaagcattgagactattatgtatgtaga 5616414  T
Q  419 ctgatga 425  Q
     ||||||    
T  5616415 ttgatga 5616421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 225 - 426
Target Start/End: Original strand, 35223576 - 35223767
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||||| |||||||| | |||||||          |     
T  35223576 catttctttgttgattttgttttgttttaaaataataaagtccctagaataattagtctgtttaatggagcattaagtgtgacttaat----------cg 35223665  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    | ||||  ||||| | |||||| ||||||| |||||||||||||| |||  ||   ||||| |||||||||||| |||||||||||| ||||||| ||||    
T  35223666 taaaacgaaaggacattattcttaaagtattcgtagtcaagctttattgtaaaaaaggataacattaaagcatatagactattatgtgggtagacggatg 35223765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 15415090 - 15415198
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | ||||| || |||||||||||||||||||||||||||||||||| |||||  |||||||| ||||| |||||    
T  15415090 agagttatcatgataagcgtaggaaagaccttgaatttcaagaaggagaccatgtgtttttgagagtcactcttgtgataggtgttggtcgtgccttgaa 15415189  T
Q  101 gtcaaagaa 109  Q
     || |||||    
T  15415190 atcgaagaa 15415198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15003428 - 15003545
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||||  |||||||| ||||| ||||| ||||||||||||||||| |||||| |||| ||||| |||||||| |||||    
T  15003428 agagttaccatgacaagcgtagaaaatcccttgagtttcaagagggagatcatgtgtttttgagagttactcctatgacaggtgtaggacgtgcattgaa 15003527  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  15003528 gtctaagaagttgactcc 15003545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 19927061 - 19927003
Alignment:
Q  125 tatgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19927061 tatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 19927003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 5713856 - 5713912
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5713856 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 5713912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 26963548 - 26963604
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26963548 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26963604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 26970371 - 26970427
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26970371 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 26970427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 5707228 - 5707284
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  5707228 tgttggaataagccctaatagccaatctatattgattgtgtttggctttgtatcatg 5707284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 10621632 - 10621576
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  10621632 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 10621576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 12357044 - 12357100
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  12357044 tgttggaataagccctaatagccaatctatattgattggatttggctttgtatcatg 12357100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 123 - 183
Target Start/End: Complemental strand, 17142432 - 17142372
Alignment:
Q  123 tttatgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||    
T  17142432 tttatgttggaaaaagccctaatagccaatctatattgattgggtttgactttgtatcatg 17142372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 868507 - 868561
Alignment:
Q  129 ttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  868507 ttggaataaaccctaatagccaatctatattgattgggtttggctttgtatcatg 868561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 3264858 - 3264975
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||    
T  3264858 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaa 3264957  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  3264958 gtcgaggaagttgactcc 3264975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11207295 - 11207412
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||||||||||||| |||| ||||||||||||||||||||    
T  11207295 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagagtcactcctttgacgggtgttggacgtgctttgaa 11207394  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  11207395 gtcgagaaagttgactcc 11207412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16676507 - 16676580
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcct 74  Q
    ||||||||||||||||||| |||||  |||||||||| ||  |||||||||| |||||||||||||||||||||    
T  16676507 agagttatcatgataagcgcaggaaggatcttgagtttcagcaaggagaccacgtgtttttgagagtcactcct 16676580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 1640229 - 1640293
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgaga 65  Q
    |||||||||||||||||| ||||||| | |||||||||||||||||||| ||||| |||||||||    
T  1640229 agagttatcatgataagcataggaaagaccttgagttccaagaaggagatcatgtatttttgaga 1640293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 10628711 - 10628655
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||    
T  10628711 tgttggaataagccctaatagccaatctatattgattggttttgactttgtatcatg 10628655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 55612594 - 55612650
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  55612594 tgttagaataagccctaataaccaatctatattgattgggtttggctttgtatcatg 55612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Complemental strand, 28393434 - 28393380
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatca 181  Q
    ||||||| |||||||||||||||||||||||||||||||||||  ||||||||||    
T  28393434 tgttggagtaagccctaatagccaatctatattgattgggtttgactttgtatca 28393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 4426904 - 4426847
Alignment:
Q  126 atgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||    
T  4426904 atgttggagtaagtcctaatagccaatctatattgattgggtttggctctgtatcatg 4426847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18268976 - 18269032
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  18268976 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 18269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 335
Target Start/End: Complemental strand, 39074346 - 39074278
Alignment:
Q  268 ctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataag 335  Q
    |||||||| ||||||||||||| | ||||||||||||| |||||||  |||||||||||||||||||||    
T  39074346 ctagaataattagtccgtttaaattgaacattaagtatgacttaatcatgagaccccattaaacataag 39074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 426
Target Start/End: Complemental strand, 21454319 - 21454137
Alignment:
Q  245 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt-aagtataacttaattgtgagaccccattaaacataaggaaactat 343  Q
    ||||||||||| ||||||||| | |||||||||||||  | ||||||||||||| || | | |||||||  ||||||||||||||  |||| || | |||    
T  21454319 tttgtttcaaagtaataaagttcttagaatagttagtttgattaatggaacattaaaatgtgacttaatattgagaccccattaattataatgacattat 21454220  T
Q  344 tctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    | | ||| ||||  ||||||| |||| ||| ||| || |||| || ||| ||||| ||| ||||||||  ||||| |||||||    
T  21454219 ttttaaaatatctatagtcaaactttattgtgaaatgagataacaataatgcataaagattattatgtgagtagattgatgat 21454137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 12132473 - 12132574
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||| |||||||||| | |||||  |  ||||||| ||||  || || |||||||||||||| || | || |||||||||||||||||||||||||||    
T  12132473 agagttgtcatgataagaggaggaaggacattgagtttcaagttggtgatcatgtgtttttgagggtgaatcatgtgactggtgttggacgtgctttgaa 12132572  T
Q  101 gt 102  Q
    ||    
T  12132573 gt 12132574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15359154 - 15359271
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||| |||||| |||||||| ||    |||||||| ||||| ||||| ||||| |||  |||||| |||||| |||| ||||| |||||||| |||||    
T  15359154 agagttttcatgacaagcgtagaaaggcccttgagtttcaagagggagatcatgtatttccgagagttactcctatgacgggtgtaggacgtgcattgaa 15359253  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  15359254 atcgaagaagttgactcc 15359271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16146120 - 16146003
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || |  || ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  16146120 agagttatcatgacaagcgtaggaaggcccttgagtttcaggaggatgatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 16146021  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  16146020 gtcgaggaagttgactcc 16146003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16445276 - 16445393
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| ||||  || || ||||||||||| || || | |||||||||||| || || |||||||||||    
T  16445276 agagttatcatgataagaggaggaaggatattgagtttcaagttggtgatcatgtgttttttagggtgaatcctgtgactggagtgggtcgtgctttgaa 16445375  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  16445376 gtgtaggaagttgactcc 16445393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 20891162 - 20891073
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||||||||| |||||||| | ||||||||||||    
T  20891162 tcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgcattgaagtcgaggaagttgactcc 20891073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27900594 - 27900477
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| | |||||||| || || || || ||||| ||| |||| || |||||| ||||  |||| | |||||| |||||    
T  27900594 agagctatcatgacaagcgtaggaaagaccttgagtttcaggagggtgatcatgtttttctgagggttactcctatgacgagtgtagaacgtgcattgaa 27900495  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  27900494 gtcgaagaagttgactcc 27900477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 1649341 - 1649456
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| || || ||||| |||||  | |||||||| || || || || ||||| ||| | ||||| |||||| |||| ||||| ||||||||||||||    
T  1649341 agagttaccacgacaagcggaggaaggaccttgagtttcaggagggcgatcatgtatttctaagagttactcctatgacgggtgtaggacgtgctttgaa 1649440  T
Q  101 gtcaaagaagttgact 116  Q
    ||| ||||||||||||    
T  1649441 gtcgaagaagttgact 1649456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 15246102 - 15246015
Alignment:
Q  31 ttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||| || || ||||| ||||| ||| ||||||| || ||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  15246102 ttgagtttcaggagggagatcatgtatttctgagagttacccctatgacgggtgtaggacgtgcattgaagtctaagaagttgactcc 15246015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 55375422 - 55375537
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | |||||| ||||||||||| || ||||||||    
T  55375422 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtaactggtgttggtcgagctttgaa 55375521  T
Q  101 gtcaaagaagttgact 116  Q
    ||  | ||||||||||    
T  55375522 gtgtatgaagttgact 55375537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 116
Target Start/End: Complemental strand, 15070592 - 15070506
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgact 116  Q
    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| || ||||  |||||||  | ||||||||||    
T  15070592 cttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacgggtgtaggtcgtgtgttgaagtttatgaagttgact 15070506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15293221 - 15293338
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||  | |||||  || ||||||| ||||  || || |||||||||||||| || | |||||||| ||| || || |||||||||||    
T  15293221 agagttatcatgataaaaggaggaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaatggagtgggtcgtgctttgaa 15293320  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  15293321 gtgtaggaagttgactcc 15293338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 29453601 - 29453718
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| || ||||||||    
T  29453601 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgggctttgaa 29453700  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  29453701 gtcgagaaagttgactcc 29453718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 55992680 - 55992729
Alignment:
Q  134 ataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||| | ||||||||||||||  ||||||||||||    
T  55992680 ataagccctaatagccaatttgtattgattgggtttgactttgtatcatg 55992729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 18550126 - 18550234
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||||| |||||||   | ||||| || ||| |  | ||| ||||||| ||||||||||| ||||| || ||||| |||||||||||    
T  18550126 agagctatcatgataagcgaaggaaatcattggagtttcaggaaaggtatcatttgtttttaagagtcactccggtgacgggcgttgggcgtgctttgaa 18550225  T
Q  101 gtcaaagaa 109  Q
    ||| |||||    
T  18550226 gtctaagaa 18550234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 328
Target Start/End: Complemental strand, 11161972 - 11161913
Alignment:
Q  269 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaa 328  Q
    ||||||||||| || |||||||||||||  |||| | ||||||||||||||| |||||||    
T  11161972 tagaatagttaatcagtttaatggaacacaaagtgtgacttaattgtgagactccattaa 11161913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 16752772 - 16752682
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| || || || || ||||| ||||||||||| |||||  |||| ||||| |||||||||||||| || | |||||| |||||||    
T  16752772 cttgagtttcaggagggtgatcatgtatttttgagagttactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttaactccga 16752682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 183
Target Start/End: Complemental strand, 5668412 - 5668371
Alignment:
Q  142 taatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||| |||| | |||||||||||    
T  5668412 taatagccaatctatattgattgtgtttggttttgtatcatg 5668371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13247853 - 13247736
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||| || ||||||| ||||  || || ||||| |||||||| || | || |||||  |||||||| | |||||||||    
T  13247853 agagttatcatgataagaggagaaaagatattgagtttcaagttggtgatcatgtatttttgagggtgaatcatgtgatcggtgttggtcttgctttgaa 13247754  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  13247753 gtgtaggaagttgactcc 13247736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 14997524 - 14997407
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||| ||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | || |||||| || ||||| |||||||||||    
T  14997524 agagtcatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcttgtgaccggagttggtcgtgctttgaa 14997425  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  14997424 gtgtaggaagttgactcc 14997407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 8845118 - 8845166
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||| ||||||||||||||||| ||||||| ||||  ||||||||||||    
T  8845118 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 8858082 - 8858130
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||| ||||||||||||||||| ||||||| ||||  ||||||||||||    
T  8858082 taagtcctaatagccaatctatgttgattgagtttgactttgtatcatg 8858130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 9849616 - 9849656
Alignment:
Q  75 gtgactggtgttggacgtgctttgaagtcaaagaagttgac 115  Q
    ||||| |||||||| |||||||||||||| |||||||||||    
T  9849616 gtgaccggtgttggtcgtgctttgaagtccaagaagttgac 9849656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 18262136 - 18262176
Alignment:
Q  143 aatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||| |||| ||||||| |||||||||||||    
T  18262136 aatagccaatctatgttgaatgggtttggctttgtatcatg 18262176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 356 - 408
Target Start/End: Complemental strand, 39074270 - 39074218
Alignment:
Q  356 cgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatta 408  Q
    ||||||||  |||| ||| |||||| |||||||||||||||| ||||||||||    
T  39074270 cgtagtcatactttattgtgaagtgagatatcattaaagcatggagactatta 39074218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 204; Significance: 1e-111; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 18252030 - 18252237
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252030 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18252129  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  18252130 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18252229  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  18252230 ctgatgat 18252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 18532721 - 18532514
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18532721 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagttcgtttaatggaacattaagtataacttaattgtgag 18532622  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18532621 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtagataga 18532522  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  18532521 ctgatgat 18532514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 27131616 - 27131409
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27131616 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27131517  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27131516 accccattaaacataaggaaactattctcaaagtatttgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 27131417  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  27131416 ctgatgat 27131409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 21171438 - 21171233
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  21171438 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttcatggaacattaaatataacttaattgtgagac 21171339  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| || ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  21171338 cccgttgaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 21171239  T
Q  421 gatgat 426  Q
    ||||||    
T  21171238 gatgat 21171233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 27310782 - 27310577
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27310782 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 27310683  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    | | || ||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  27310682 cacgttgaacataaggaaactattcttaaagtatcagtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtgggtagact 27310583  T
Q  421 gatgat 426  Q
    ||||||    
T  27310582 gatgat 27310577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 16359240 - 16359035
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16359240 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagaataacttaattgtgagac 16359141  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||| |||||| || |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||| ||||||||    
T  16359140 cccgttaaacataaggaaactattcttaaagtaaccctagtcaagctttattgagaaatggaatatcattaaagcatagagactattatgtgggtagact 16359041  T
Q  421 gatgat 426  Q
    ||||||    
T  16359040 gatgat 16359035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 36816834 - 36816633
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||| ||     
T  36816834 catttctttattgattttgttttgtttcaaaataatgaagtccctagaatagttcgtctgtttaatggaacattaagtataaattaattgtgagactccg 36816735  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    ||||||||||||| | |||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||| | ||||||||||    
T  36816734 ttaaacataaggacattattcttaaagtatccatagtcaagctttattgagaagtgggataccattaaagcatagagactattatgtggatagactgatg 36816635  T
Q  425 at 426  Q
    ||    
T  36816634 at 36816633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 3856126 - 3855919
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3856126 acaaggcatttctttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagcccgtttaatggaacattaagtataacttaattgtgag 3856027  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||| | |||||| ||| |||  |||||||| |||| ||| |||||||||||| |||||||||| |||||||||| || ||||||    
T  3856026 accccattaaacataaggacattattcttaaaatatttgtagtcaaactttattgtgaagtgggatattattaaagcatggagactattacgtgggtaga 3855927  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  3855926 ctgatgat 3855919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 22657429 - 22657221
Alignment:
Q  219 acaaggcatttctttattgatttt-gttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtga 317  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  22657429 acaagacatttctttattgatttttgttttgtttcaaaataataaagttcctagaatagttagtctgtttaatggaacattaaatataacttaattgtga 22657330  T
Q  318 gaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtag 417  Q
    |||||| ||||||||||||| || ||||| ||||| ||  |||||||||||| ||  ||| || ||||||||||||||||||||||||| |||| | |||    
T  22657329 gacccctttaaacataaggacacaattcttaaagtgtctctagtcaagctttattctgaaatgagatatcattaaagcatagagactatcatgtggatag 22657230  T
Q  418 actgatgat 426  Q
    |||||||||    
T  22657229 actgatgat 22657221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 19761002 - 19761128
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  19761002 agagttatcatgataagcgtaggaaagaccttgagtttcaagaaggagaccatgtgtttttgagagtcactcttgtgattggtgttggacgtgcattgaa 19761101  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  19761102 gtcaaagaagttgactccgagatttat 19761128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20137001 - 20136875
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  20137001 agagttaccatgataagcgtaggaaagatcttgagtttcaagaaggagacctcgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaa 20136902  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  20136901 gtcaaagaagttgactccgagatttat 20136875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16350735 - 16350854
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16350735 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16350834  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16350835 gtcaaagaagttgaccccga 16350854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33391165 - 33391284
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  33391165 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 33391264  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  33391265 gtcaaagaagttgaccccga 33391284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 17045151 - 17045277
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  17045151 agagttatcatgataagcgcaggaaggatcttgagtttcaggaaggagaccatgtgtttttgagagtcactcctgtgaccggtgttggacgtgccttgaa 17045250  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||| |||||||||||    
T  17045251 gtcaaagaagttgaccccgagatttat 17045277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21837173 - 21837054
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21837173 agagttatcatgatcagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 21837074  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  21837073 gtcaaagaagttgaccccga 21837054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 51333629 - 51333748
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  51333629 agagttatcatgataagcgtagaaaagatcttgagttccaataaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 51333728  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  51333729 gtcaaagaagttgaccccga 51333748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20250073 - 20249947
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||| ||| |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||    
T  20250073 agagttaccatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtatttttgagagtcactcctgtgactggtgttggacgagcgttgaa 20249974  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||| ||||||    
T  20249973 gtcaaagaagttgactccgaaatttat 20249947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 50620380 - 50620506
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| ||||| | ||| || || |||||||||||||||||||||||||||||||||||||| |||||    
T  50620380 agagttatcatgataagcgtaggaaagaccttgagtttcaagaggaagatcacgtatttttgagagtcactcctgtgactggtgttggacgtgcattgaa 50620479  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  50620480 gtcaaagaagttgactccgaggtttat 50620506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 4 - 127
Target Start/End: Complemental strand, 16369517 - 16369394
Alignment:
Q  4 gttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtc 103  Q
    ||||||||||||||||||||||| | ||||| |||||||||||||| ||||| |||||||||||||||||||||||  ||||||||||||| ||||||||    
T  16369517 gttatcatgataagcgtaggaaagaccttgaattccaagaaggagatcatgtatttttgagagtcactcctgtgacaagtgttggacgtgcattgaagtc 16369418  T
Q  104 aaagaagttgactccgagatttat 127  Q
    ||||||||||||| |||| |||||    
T  16369417 aaagaagttgacttcgaggtttat 16369394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21830526 - 21830407
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||| | ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  21830526 agagttatcacgataagcgtggaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 21830427  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  21830426 gtcaaagaagttgaccccga 21830407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19106590 - 19106471
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| || ||| |||||||||| || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  19106590 agagttatcatgataagcggagaaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgcgttgaa 19106491  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  19106490 gtcaaagaagttgaccccga 19106471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 42 - 127
Target Start/End: Original strand, 16078810 - 16078895
Alignment:
Q  42 gaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  16078810 gaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaagtcaaagaagttgactccgagatttat 16078895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21747757 - 21747632
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||| |||||||||| ||| |||||||||| | ||||||||||||  | | |||||||||||||||||||||||||||||||||||| |||||    
T  21747757 agagttaccataataagcgtag-aaagatcttgagtttctagaaggagaccacatatgtttgagagtcactcctgtgactggtgttggacgtgcattgaa 21747659  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||| ||||||||||||    
T  21747658 gtcaaagaagttgaatccgagatttat 21747632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41354605 - 41354719
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  41354605 agagttatcatgataagcgtagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 41354704  T
Q  101 gtcaaagaagttgac 115  Q
    ||| |||||||||||    
T  41354705 gtcgaagaagttgac 41354719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 27277756 - 27277557
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||| ||| |||||||||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||||| || | ||||||| | ||||||       
T  27277756 catttctttgttgtttttgttttgtttcaaaataataacgtccctagaataattagtccatttaacggagcatta-gtgtgacttaatcgcgagacctt- 27277659  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||| |  || || | |||||| |||||||||||||||| ||||| ||| |||  |||||| ||||||||||||||||||||||||| ||||||| ||||    
T  27277658 ttaaccgaaatgacattattcttaaagtatccgtagtcaggctttattgtgaaaagggataacattaaagcatagagactattatgtgggtagaccgatg 27277559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 50612608 - 50612678
Alignment:
Q  57 tttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  50612608 tttttgagagtcactcctgtgactggtgttggacgtgcattgaagtcaaagaagttgactccgaggtttat 50612678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 12006712 - 12006539
Alignment:
Q  253 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 352  Q
    ||||||||||||||||||||||||||||||  |||||||||| ||||||| |  |||||| |||||||||||| ||||||||||| | |||| | |||      
T  12006712 aaaataataaagtccctagaatagttagtctatttaatggaatattaagtgtgccttaatcgtgagaccccatgaaacataaggacattattattaaaac 12006613  T
Q  353 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    || ||||||||||| ||  || |||| |||||| ||||||| | |||||| | ||||||   ||||||||||||    
T  12006612 attcgtagtcaagccttagtgtgaagagggataacattaaaacttagagattgttatgtgcatagactgatgat 12006539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 253 - 426
Target Start/End: Complemental strand, 12014457 - 12014284
Alignment:
Q  253 aaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagt 352  Q
    |||||||||||||| ||||||||  ||||||||||||||||| ||||||| ||| ||||| || ||| |||||||||||||| ||   |||||| |||      
T  12014457 aaaataataaagtcactagaatacatagtccgtttaatggaatattaagtgtaaattaatcgttagatcccattaaacataatgatgttattcttaaaac 12014358  T
Q  353 atccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    ||||||||| |||||||  || |||| ||||||  |||||||| || |||| ||||||| |||||| |||||||    
T  12014357 atccgtagttaagctttagtgtgaagagggatacgattaaagcgtaaagaccattatgtgggtagaatgatgat 12014284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 125 - 183
Target Start/End: Complemental strand, 18532815 - 18532757
Alignment:
Q  125 tatgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18532815 tatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18532757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 18251935 - 18251992
Alignment:
Q  126 atgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18251935 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18251992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19665012 - 19665129
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||||||||||||   |||||||| ||||| ||||| ||||| ||| ||||||| |||||| |||| || || |||||||| |||||    
T  19665012 agagttatcatgacaagcgtaggaaagcccttgagtttcaagagggagatcatgtatttctgagagttactcctatgacgggggtaggacgtgcattgaa 19665111  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  19665112 gtcgaagaagttgactcc 19665129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11382817 - 11382700
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||  |||||||||| || || || || ||||| ||| |||||||||||||| |||| |||||||||||||| |||||    
T  11382817 agagttaccatgacaagcgaaggaaggatcttgagtttcaggagggtgatcatgtttttctgagagtcactcctttgacgggtgttggacgtgccttgaa 11382718  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  11382717 gtcgaggaagttgactcc 11382700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20294635 - 20294518
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||  |||||||||| ||||| || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||    
T  20294635 agagttaccatgacaagcgaaggaaggatcttgagtttcaagagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaa 20294536  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  20294535 gtcgagaaagttgactcc 20294518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20940199 - 20940316
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||    |||||||| || || || || ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  20940199 agagttatcatgataagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 20940298  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  20940299 gtcgaagaagttgactcc 20940316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 426
Target Start/End: Complemental strand, 9918106 - 9917918
Alignment:
Q  231 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 330  Q
    |||||||||||||||||||| ||||||||||||||| ||       |||||  ||||||| |||||||||||||||||| ||   ||||  ||||||||     
T  9918106 tttattgattttgttttgttacaaaataataaagtcactt------ttagtttgtttaatcgaacattaagtataacttgatcacgaga-tccattaaat 9918014  T
Q  331 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    ||||||| | |||||| ||| ||||  |||| ||||||| |||  |||||||||| |||| ||||||||||| || ||||| |||||  |||||||    
T  9918013 ataaggacattattcttaaaatatctatagttaagctttattgttaagtgggatagcattgaagcatagagaatactatgtcggtaggttgatgat 9917918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19854537 - 19854420
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| ||||| ||||| ||||| ||| ||||||| |||||| |||| ||||| || || || |||||    
T  19854537 agagttatcatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtatttctgagagttactcctatgacgggtgtaggtcgggcattgaa 19854438  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  19854437 gtcgaagaagttgactcc 19854420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27310877 - 27310821
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  27310877 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 27310821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 41308048 - 41307931
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||    |||||||| ||||| ||||||||||||||| |||| || |||||| |||| |||||  ||||||| |||||    
T  41308048 agagttaccatgacaagcgtagaaagccccttgagtttcaagagggagaccatgtgtttctgagggttactcctatgacgggtgtatgacgtgcattgaa 41307949  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| || |||||||||||    
T  41307948 gtctaaaaagttgactcc 41307931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 46518944 - 46518827
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||| | |||||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| |||||||| |||||||||||    
T  46518944 agagctatcatgataagaggaggaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggtgttggtcgtgctttgaa 46518845  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  46518844 gtgtaggaagttgactcc 46518827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 16359336 - 16359280
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||||||||||||||||||||||||  | |||||||||||    
T  16359336 tgttggagtaagccctaatagccaatctatattgattgggttaggatttgtatcatg 16359280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 56 - 118
Target Start/End: Original strand, 22142232 - 22142294
Alignment:
Q  56 gtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||||||| | |||||| ||||||||||| |||||||||||||  ||||||||||||||    
T  22142232 gtttttgagagtgaatcctgtaactggtgttggtcgtgctttgaagtgtaagaagttgactcc 22142294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 37677243 - 37677185
Alignment:
Q  60 ttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  37677243 ttgagggtcactcctttgacgggtgttggacgtgctttgaagtcgaggaagttgactcc 37677185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20856897 - 20857014
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| ||||| || |||||||||||  | |||| ||| || ||||| |||||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  20856897 agagctatcacgacaagcgtaggaaggaccttgcgtttcaggaaggtgaccatgtttttctgagggttactcctatgacgggtgtgggacgtgcattgaa 20856996  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  20856997 gtcgaggaagttgactcc 20857014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 30720694 - 30720625
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaa 294  Q
    ||||| ||||||| |||| |||||||| ||||||||||||| ||| ||||| ||||| ||||||||||||    
T  30720694 catttttttattggttttattttgttttaaaataataaagttcctggaataattagttcgtttaatggaa 30720625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 21171535 - 21171479
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||| |||||||||||||||||| ||||| |||| |||||||||||||    
T  21171535 tgttggagtaagctctaatagccaatctatatggattgagtttggctttgtatcatg 21171479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 3403248 - 3403325
Alignment:
Q  249 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 326  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3403248 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3403325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 3443571 - 3443494
Alignment:
Q  249 tttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccatt 326  Q
    ||||||| ||||||||||  || ||||||||||| | ||||||||| ||||||| | |||||| ||||||||| ||||    
T  3443571 tttcaaagtaataaagtctataaaatagttagtctgattaatggaatattaagtgtgacttaaatgtgagaccacatt 3443494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 20075223 - 20075312
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| | || ||||||||| |||| ||||||||||||||||||||||| |  |||||||||||    
T  20075223 tcttgagtttcaggagggtgatcatgtttttctaagggtcactcctttgacgggtgttggacgtgctttgaagtcgagaaagttgactcc 20075312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 20831528 - 20831645
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||| ||    
T  20831528 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttaaa 20831627  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  20831628 gtgtaggaagttgactcc 20831645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 31550317 - 31550434
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| || ||||||||    
T  31550317 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgggctttgaa 31550416  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  31550417 gtcgagaaagttgactcc 31550434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 36816926 - 36816881
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatc 180  Q
    ||||||||||||  ||||||||||||||||||||| ||||||||||    
T  36816926 taagccctaatattcaatctatattgattgggtttggctttgtatc 36816881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 3856220 - 3856164
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| || |||||||||||||||| || ||||||||||||  ||||||||||||    
T  3856220 tgttggagtaggccctaatagccaatccatcttgattgggtttgactttgtatcatg 3856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 22433281 - 22433369
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||||||  |||| || |||||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  22433281 cttgagtttcaggagggtgatcatgtgttcctgagggttactcctatgacgggtgtgggacgtgcattgaagtcgaagaagttgactcc 22433369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 22657521 - 22657469
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtat 179  Q
    ||||||| |||||| ||||||||||| ||||||||||| |||| |||||||||    
T  22657521 tgttggagtaagccttaatagccaatatatattgattgagtttggctttgtat 22657469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 20914383 - 20914316
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| |||||||| || | ||||||||| |||||||| |||||||||||||  | ||||||||||||    
T  20914383 catgtatttttgagggtgaatcctgtgaccggtgttggtcgtgctttgaagtgtaggaagttgactcc 20914316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27131704 - 27131652
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||     |||||||| |||||||||||||    
T  27131704 tgttggaataagccctaatagccaatctat----gttgggtttggctttgtatcatg 27131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27277856 - 27277800
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||| || |||  ||||  ||||||||||||    
T  27277856 tgttggagtaagccctaatagccaatctatgttaattatgtttgactttgtatcatg 27277800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 200; Significance: 1e-109; HSPs: 3)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 18288 - 18495
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  18288 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaattgaacattaagtataacttaattgtgag 18387  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18388 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 18487  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  18488 ctgatgat 18495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 890 - 1015
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||    
T  890 agagttatcatgaaaagcgtagaaaagatcttgagttccaagaaggagaccacgt-tttttgagagtcactcctgtgactggtgttggacgagctttgaa 988  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  989 gtcaaagaagttgactccgagatttat 1015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18196 - 18252
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18196 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 18252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 79)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 29327784 - 29327991
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29327784 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgag 29327883  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29327884 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29327983  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  29327984 ctgatgat 29327991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 11536269 - 11536062
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  11536269 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtacaacttaattgtgag 11536170  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11536169 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11536070  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  11536069 ctgatgat 11536062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 11543187 - 11542980
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11543187 acaatgcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtcag 11543088  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11543087 accccattaaacataaggaacctattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 11542988  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  11542987 ctgatgat 11542980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 15152445 - 15152650
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152445 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 15152544  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15152545 cccgttaaacatacggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15152644  T
Q  421 gatgat 426  Q
    ||||||    
T  15152645 gatgat 15152650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 15148144 - 15148349
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  15148144 aaggcatttctttattgagtttgttttgtttcaaaataataaagttcctagaatagttagtccgtttgattgaacattaagtataacttaattgtgagac 15148243  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15148244 cccgttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 15148343  T
Q  421 gatgat 426  Q
    ||||||    
T  15148344 gatgat 15148349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 18561009 - 18561214
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  18561009 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaactgtgagac 18561108  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||| ||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  18561109 cccgttaaacattaggaaactattcttaaagtatctgtagtcaagctttattgagaggtgggatatcattaaagcatagagactattatgtgggtagact 18561208  T
Q  421 gatgat 426  Q
    ||||||    
T  18561209 gatgat 18561214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 12750828 - 12751033
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  12750828 aaggcatttctttattgattttgttttgtttcaaagtaataaagtccctagaatagttagtccgtttaatgaaacattaagtataacttaattgtgagac 12750927  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    | | |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  12750928 ctcgttaaacataaagaaactattcttaaagtatccgtagtcaagctttattgagaagttggatatcattaaagcatagagactattatgtggatagact 12751027  T
Q  421 gatgat 426  Q
    ||||||    
T  12751028 gatgat 12751033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 225 - 422
Target Start/End: Original strand, 12738542 - 12738739
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||||| ||||||||||||||||||||       
T  12738542 catttctttattgattttattttgtttcaaaataataaagtccctagaatagttagtttgtttaatgaaacattaattataacttaattgtgagaccttg 12738641  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactga 422  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12738642 ttaaacataaggaaactattcttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtgggtagactga 12738739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 18258047 - 18257842
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  18258047 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtctgtttaatggaacattaagtatgacttaattgtgagac 18257948  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||||||||||| ||||| | |||||| |||||||||||||||||| ||| |||  |||| ||||| || ||| ||||| |||||||||||| | |||| |    
T  18257947 cccattaaacacaaggacattattcttaaagtatccgtagtcaagtttttttgttaagtaggataacaataatgcataaagactattatgtggatagatt 18257848  T
Q  421 gatgat 426  Q
    ||||||    
T  18257847 gatgat 18257842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8707802 - 8707683
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8707802 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 8707703  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  8707702 gtcaaagaagttgaccccga 8707683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13686261 - 13686142
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  13686261 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 13686162  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  13686161 gtcaaagaagttgaccccga 13686142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 15161130 - 15161249
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  15161130 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 15161229  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15161230 gtcaaagaagttgaccccga 15161249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 17391 - 17515
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||||| |||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  17391 agttatcatgataagcgcaggaaggatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaagt 17490  T
Q  103 caaagaagttgactccgagatttat 127  Q
    ||||||||||||||| |||||||||    
T  17491 caaagaagttgactctgagatttat 17515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18551831 - 18551950
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  18551831 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 18551930  T
Q  101 gtcaaagaagttgactccga 120  Q
    |||||||||| |||| ||||    
T  18551931 gtcaaagaagctgaccccga 18551950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 15154725 - 15154851
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || |||||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||    
T  15154725 agagttatcatgataagcgtagaaaagatcttgaatttcaagaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaa 15154824  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  15154825 gtcaaagaagttgactccgagatttat 15154851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8198825 - 8198706
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  8198825 agagttatcatgataagcgtagaaaagatcttgaattccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 8198726  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  8198725 gtcaaagaagttgaccccga 8198706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11237286 - 11237405
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  11237286 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 11237385  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  11237386 gtcaaagaagttgaccccga 11237405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 44791424 - 44791543
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  44791424 agagttatcatgataagcgtagaaaagatcttgaattccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 44791523  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||| ||||| ||||    
T  44791524 gtcaaagaaattgaccccga 44791543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14038004 - 14037878
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| || || |||||||||||||||||| ||||||||||||| ||||| |||||    
T  14038004 agagttatcatgataagcgtaggaaagaccttgagttccaagaaggagatcacgtatttttgagagtcactcctatgactggtgttgggcgtgcattgaa 14037905  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||| || ||||||||    
T  14037904 gtcaaagaagttgacaccaagatttat 14037878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14348034 - 14347908
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| || || |||||||||||||||||| ||||||||||||| ||||| |||||    
T  14348034 agagttatcatgataagcgtaggaaagaccttgagttccaagaaggagatcacgtatttttgagagtcactcctatgactggtgttgggcgtgcattgaa 14347935  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||| || ||||||||    
T  14347934 gtcaaagaagttgacaccaagatttat 14347908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 23516842 - 23516961
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  23516842 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 23516941  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  23516942 gtcaaagaagttgaccccga 23516961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15204076 - 15203950
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||  ||||||||||||||| || || |||||    
T  15204076 agagttatcatgataagcgtaggaaagaccttgagtttcaagaaggagaccatgtgttttttagagtcacttttgtgactggtgttggccgcgcattgaa 15203977  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||| |||||||||||||| |||||    
T  15203976 gtcaaataagttgactccgaggtttat 15203950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15624749 - 15624623
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||| ||||||| | |||||||| || |||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||    
T  15624749 agagttatcatgataagcttaggaaagaccttgagtttcaggaaggagaccatgtatttttgagagtcactcatgtgactggtgttggacgtgcattgaa 15624650  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||| ||| ||||||||||| |||||    
T  15624649 gtcaaggaaattgactccgaggtttat 15624623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 10871192 - 10871072
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | ||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10871192 agagttatcatgataagcgtagaaaagaccttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 10871093  T
Q  101 gtcaaagaagttgactccgag 121  Q
    ||||||||||||||| |||||    
T  10871092 gtcaaagaagttgaccccgag 10871072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14332594 - 14332475
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  14332594 agagttatcacgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 14332495  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  14332494 gtcaaagaagttgaccccga 14332475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11553175 - 11553294
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| || ||  |||||||||| || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  11553175 agagttatcatgataagcgcagaaaggatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgcattgaa 11553274  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  11553275 gtcaaagaagttgaccccga 11553294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12687698 - 12687579
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || ||||||||||| ||||||||| ||||||||||| |||||||||| |||||||| |||||    
T  12687698 agagttatcatgataagcgcaggaaggatcttgagtttcaggaaggagaccacgtgtttttgcgagtcactcctatgactggtgtaggacgtgcattgaa 12687599  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  12687598 gtcaaagaagttgaccccga 12687579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18177939 - 18177820
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| ||||| ||||||||||||||| | |||||||| | ||||||||||||    
T  18177939 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtgttcttgagagtcactcctataactggtgtagaacgtgctttgaa 18177840  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  18177839 gtcaaagaagttgaccccga 18177820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 14954817 - 14954703
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| || ||  |||||||||| || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  14954817 agagttatcatgataagcgcagaaaggatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgcattgaa 14954718  T
Q  101 gtcaaagaagttgac 115  Q
    |||||||||||||||    
T  14954717 gtcaaagaagttgac 14954703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 12206851 - 12206970
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||| |||| ||  ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||    
T  12206851 agagttatcatgacaagtgtagaaaggatcttaagtttcaagaaggagaccatgtgtttttgagagtcactcctgtgacaggtgttggtcgtgccttgaa 12206950  T
Q  101 gtcaaagaagttgactccga 120  Q
     |||||||||||||| ||||    
T  12206951 atcaaagaagttgacgccga 12206970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 225 - 407
Target Start/End: Original strand, 13392157 - 13392338
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||| |||| |||||||||||||||||||||||||| ||||||| | |||||| | |||||||| |||||||| | ||||||| |||||| ||||    
T  13392157 catttctttgttgactttgttttgtttcaaaataataaagttcctagaacaattagtctgcttaatggagcattaagtgtgacttaatcgtgaga-ccca 13392255  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 407  Q
    |||||   ||||| | |||||| ||||||||  ||||||| |||| ||| |||  |||||| ||||||| |||||||||||||    
T  13392256 ttaaatgaaaggacattattcttaaagtatcaatagtcaaactttattgtgaaaagggataacattaaaacatagagactatt 13392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 35964923 - 35965016
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgc 94  Q
    |||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||||  |||||||    
T  35964923 agagttatcatgataagcgtaggaaggatcttgagtttcaagaaggggaccatgtgtttttgagagtcactcctgtgactagtgtatgacgtgc 35965016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19147409 - 19147290
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||||||||||   |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||||    
T  19147409 agagttaccatgacaagcgtaggaaagcccttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacaggtgtaggacgtgcattgaa 19147310  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  19147309 gtctaagaagttgactccga 19147290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20746808 - 20746689
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||||||||||   |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||||    
T  20746808 agagttaccatgacaagcgtaggaaagcccttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacaggtgtaggacgtgcattgaa 20746709  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  20746708 gtctaagaagttgactccga 20746689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 426
Target Start/End: Original strand, 2364917 - 2365101
Alignment:
Q  241 ttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaac 340  Q
    ||||| |||||||||||||||||||| |||||||| ||||||  | |||||||||||||||| |  |||||| |||||| ||||||||||  || || |     
T  2364917 ttgttatgtttcaaaataataaagtctctagaataattagtctttctaatggaacattaagtgtggcttaatcgtgagaacccattaaactaaatgacat 2365016  T
Q  341 tattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    |||||| ||| ||| ||||||||| | || ||| ||| || |||| ||||||| |||||||||||| |||| ||| ||||||||||    
T  2365017 tattcttaaaatattcgtagtcaa-ccttattgtgaaatgagataacattaaaacatagagactatcatgtgggtcgactgatgat 2365101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14264295 - 14264412
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||||    
T  14264295 agagttaccatgacaagcgtaggaaggcgcttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacgggtgtaggacgtgcattgaa 14264394  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  14264395 gtctaagaagttgactcc 14264412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 15102652 - 15102769
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||||||||||| |||||| |||| ||||| |||||||| |||||    
T  15102652 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttttgagagttactcctatgacgggtgtaggacgtgcattgaa 15102751  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  15102752 gtctaagaagttgactcc 15102769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 183
Target Start/End: Original strand, 12738440 - 12738499
Alignment:
Q  124 ttatgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12738440 ttatgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 12738499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 312
Target Start/End: Original strand, 39111819 - 39111905
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaat 312  Q
    |||||||||||| |||||||||| |||||||| |||||||||||||||||||  ||||||||||||| |||||||||||  |||||||    
T  39111819 catttctttattaattttgttttatttcaaaa-aataaagtccctagaatagcgagtccgtttaatgaaacattaagtacgacttaat 39111905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 2653332 - 2653275
Alignment:
Q  126 atgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  2653332 atgttggaataagccctaatagccaatctatattgattgggattggctttgtatcatg 2653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16072345 - 16072462
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  16072345 agagttaccatgacaagcgaaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttactcctatgacgggtgtaggacgtgcattgaa 16072444  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  16072445 gtctaagaagttgactcc 16072462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 252 - 411
Target Start/End: Original strand, 7396221 - 7396381
Alignment:
Q  252 caaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 350  Q
    |||||||| || ||| |||||||||||||| | ||||| ||||||||||||||| |||||||  |||||||| |||||||||||| ||| |||||| |||    
T  7396221 caaaataaaaatgtcgctagaatagttagttcatttaaatggaacattaagtatgacttaatcttgagaccctattaaacataagaaaattattcttaaa 7396320  T
Q  351 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 411  Q
      ||  |||||||||| ||  || ||| |  |||   ||||||||||||||||||||||||    
T  7396321 acatatgtagtcaagccttagtgtgaaatacgatgatattaaagcatagagactattatgt 7396381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 11543279 - 11543223
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  11543279 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 11543223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 21662158 - 21662071
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacg 91  Q
    |||||||||||||||||||||||||  |||||||||| ||||   ||||||||||||||||||||||||| ||| | || |||||||||||    
T  21662158 agagttatcatgataagcgtaggaaggatcttgagtttcaag---gagaccatgtgtttttgagagtcacccctcttaccggtgttggacg 21662071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 8212179 - 8212296
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||    
T  8212179 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaa 8212278  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  8212279 gtcgaggaagttgactcc 8212296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11306314 - 11306431
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||    
T  11306314 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaa 11306413  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  11306414 gtcgaggaagttgactcc 11306431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 49152499 - 49152382
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||| ||||||||    
T  49152499 agagttaccatgacaagcgaaggaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgggctttgaa 49152400  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  49152399 gtcgaggaagttgactcc 49152382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 11536361 - 11536305
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||    
T  11536361 tgttggaataagccctaatagccactctatattgattggttttggctttgtatcatg 11536305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 12750733 - 12750789
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||    
T  12750733 tgttggagtaagccctaatagctaatctatattgattgggtttggctttgtatcatg 12750789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 15152350 - 15152406
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||    
T  15152350 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcatg 15152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 11388479 - 11388597
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | | |||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  11388479 agagctatcatgacaagcgtaggaaggaccatgagtttcaaga-ggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgcattaaa 11388577  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  11388578 atctaagaagttgactccga 11388597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 29327690 - 29327745
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcat 182  Q
    ||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29327690 tgttggagtaagccctaatagccaatctatattgattgggtttggttttgtatcat 29327745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 41219 - 41327
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| ||||||||||| || || |||||  | ||||| || ||||| || ||||| ||||| ||||||||||| ||||| || |||||||||||||||||    
T  41219 agagctatcatgataaacgaagaaaataattggagtttcaggaaggggatcatgtatttttaagagtcactccggtgacgggcgttggacgtgctttgaa 41318  T
Q  101 gtcaaagaa 109  Q
    ||| |||||    
T  41319 gtctaagaa 41327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 15148049 - 15148105
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  15148049 tgttggagtaagccctaatagccaatctatattaattgggtttggttttgtatcatg 15148105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 3132748 - 3132791
Alignment:
Q  293 aacattaagtataacttaattgtgagaccccattaaacataagg 336  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  3132748 aacattaagtgtaacttaattgtgagaccccattaaacataagg 3132791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 11772314 - 11772373
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttt 60  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||| ||||| ||||    
T  11772314 agagttatcatgataagcgtaggaaagaccttgagtttcaagaaggagatcatgtatttt 11772373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4440125 - 4440008
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |  ||||||| || |  || || ||||||||||||||||| |  ||| |||||||||| ||||||||||||||    
T  4440125 agagttatcatgataagaggaggaaggacattgagtttcaggttggtgatcatgtgtttttgagagtgaaccctatgactggtgtaggacgtgctttgaa 4440026  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  4440025 gtgtaggaagttgactcc 4440008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 269 - 334
Target Start/End: Original strand, 10234179 - 10234244
Alignment:
Q  269 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataa 334  Q
    ||||||||||||||||||||||| | |||||| |||||||||||  |||||  |||||||||||||    
T  10234179 tagaatagttagtccgtttaatgaaccattaaatataacttaatcatgagattccattaaacataa 10234244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13353348 - 13353247
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |  |||||||||||   || || | ||||||| ||||||| | | ||||||||||||||||||||||||||||    
T  13353348 agagttatcatgataagaggaggaaggacattgagttccaaattggtgatcttgtgtttctgagagtgaatactgtgactggtgttggacgtgctttgaa 13353249  T
Q  101 gt 102  Q
    ||    
T  13353248 gt 13353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13665746 - 13665629
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||| | |||||||||||    |||||||| ||||| | ||| ||||| ||| ||||||| |||||| |||| ||||| || || || |||||    
T  13665746 agagttatcatcacaagcgtaggaaggcccttgagtttcaagaggaagatcatgtatttctgagagttactcctatgacgggtgtaggtcgggcattgaa 13665647  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  13665646 gtcgaagaagttgactcc 13665629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 13392030 - 13392085
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcat 182  Q
    ||||||| |||||||||||| ||||||||||||||||| ||||  |||||||||||    
T  13392030 tgttggagtaagccctaatatccaatctatattgattgtgtttgactttgtatcat 13392085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 14936494 - 14936443
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||||| | || ||||||||||||||| |||||||||||||    
T  14936494 catgtgtttttgagagtgaatcttgtgactggtgttggtcgtgctttgaagt 14936443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 7824097 - 7823980
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||| ||    
T  7824097 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttaaa 7823998  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  7823997 gtgtaggaagttgactcc 7823980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21674606 - 21674723
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |  |||| || ||||  || || ||||||||||||||||| |  | ||||| |||| ||||||||||||||||    
T  21674606 agagttatcatgataagaggaggaaggacattgaatttcaagttggtgatcatgtgtttttgagagtgaaccttgtgattggtattggacgtgctttgaa 21674705  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  ||||| ||||||||    
T  21674706 gtgtaagaaattgactcc 21674723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 26118656 - 26118773
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||  | |||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| |||||| ||||    
T  26118656 agagttaccatgacaagcgaaggaaggagcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgtgctctgaa 26118755  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  26118756 gtcgagaaagttgactcc 26118773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27107847 - 27107964
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||| ||    
T  27107847 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttaaa 27107946  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  27107947 gtgtaggaagttgactcc 27107964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 2653239 - 2653207
Alignment:
Q  219 acaaggcatttctttattgattttgttttgttt 251  Q
    |||||||||||||||||||||||||||||||||    
T  2653239 acaaggcatttctttattgattttgttttgttt 2653207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 14286456 - 14286544
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||||||||||| |||||  |||| ||||| ||| |||| |||||||| ||||||||||||||    
T  14286456 cttgagtttcaggagggtgatcatgtatttttgagagttactccgatgacaggtgtaggatgtgcattgaagtctaagaagttgactcc 14286544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 18258143 - 18258087
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||| |||||||||||| ||||||||| ||| || ||||||||||    
T  18258143 tgttggagtaagccctgatagccaatctagattgattggttttggccttgtatcatg 18258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 15364087 - 15364036
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||||| | || |||||| |||||||| |||||||||||||    
T  15364087 catgtgtttttgagagtgaatcttgtgaccggtgttggtcgtgctttgaagt 15364036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 16950572 - 16950639
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||||| | ||||||||||||    
T  16950572 catgtttttctgagagttactcctatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 16950639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 18054004 - 18054123
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||    |||||||| ||||| || || ||||| ||| ||||||| |||||  |||| ||||| ||||||||||||||    
T  18054004 agagttaccatgacaagcggaggaaggcccttgagtttcaagagggtgatcatgtatttctgagagtgactccgatgacgggtgtaggacgtgctttgaa 18054103  T
Q  101 gtcaaagaagttgactccga 120  Q
     || |  |||||||||||||    
T  18054104 atcgagaaagttgactccga 18054123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 23199823 - 23199913
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| || || ||||| ||| | ||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  23199823 cttgagtttcaagagggtgatcatgtatttctaagagtgactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 23199913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 23505950 - 23506040
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| || || ||||| ||| | ||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  23505950 cttgagtttcaagagggtgatcatgtatttctaagagtgactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 23506040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 14130069 - 14129952
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||||||||| |||||    |||||||| || || || || ||||| ||||| ||||| |||||  ||||  |||| |||||||||||||| |    
T  14130069 agttaccatgataagcggaggaaggcccttgagtttcaggagggtgatcatgtattttttagagttactccgatgacgagtgtaggacgtgctttgaaat 14129970  T
Q  103 caaagaagttgactccga 120  Q
    | | ||||||||||||||    
T  14129969 cgaggaagttgactccga 14129952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 14433887 - 14433770
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||||||||| |||||    |||||||| || || || || ||||| ||||| ||||| |||||  ||||  |||| |||||||||||||| |    
T  14433887 agttaccatgataagcggaggaaggcccttgagtttcaggagggtgatcatgtattttttagagttactccgatgacgagtgtaggacgtgctttgaaat 14433788  T
Q  103 caaagaagttgactccga 120  Q
    | | ||||||||||||||    
T  14433787 cgaggaagttgactccga 14433770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 45146752 - 45146652
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||| ||||| |||||||  |  ||| ||| ||||  || || ||||||||||||||| | | || || ||||||||||||||||||||||||    
T  45146752 agagttatcattataagagtaggaaggacattgtgtttcaagttggtgatcatgtgtttttgagaatgaatcatg-gactggtgttggacgtgctttgaa 45146654  T
Q  101 gt 102  Q
    ||    
T  45146653 gt 45146652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 18560913 - 18560969
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||| | || |||||||| ||||||||| || |||||||||||||    
T  18560913 tgttggagtaagcccttaaaggcaatctatgttgattgggcttggctttgtatcatg 18560969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 103
Target Start/End: Complemental strand, 20466977 - 20466877
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||||| |||||  || ||||||| | ||  | |||  |||||||||| ||||| |  || ||||| |||||||| |||||||||||||    
T  20466977 agttatcatgataagcggaggaaggatattgagtttctagttgaagataatgtgttttttagagttaaccccgtgaccggtgttggtcgtgctttgaagt 20466878  T
Q  103 c 103  Q
    |    
T  20466877 c 20466877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 200; Significance: 1e-109; HSPs: 86)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 27381459 - 27381252
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381459 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27381360  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27381359 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27381260  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  27381259 ctgatgat 27381252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 27471842 - 27471635
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471842 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 27471743  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27471742 accccattaaacatatggaaactattctcaaagtatccatagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 27471643  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  27471642 ctgatgat 27471635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 17684674 - 17684469
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684674 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 17684575  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684574 cccgttaaacataaggaaactattctcaaagtatccgtagtcaagctttgatgagaagtgggatatcattaaagcatagagactattatgtaggtagact 17684475  T
Q  421 gatgat 426  Q
    ||||||    
T  17684474 gatgat 17684469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 29308890 - 29309097
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29308890 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29308989  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29308990 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29309089  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  29309090 ctgatgat 29309097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 29315850 - 29316057
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  29315850 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccatttaatggaacattaagtataacttaattgtgag 29315949  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29315950 agcccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 29316049  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  29316050 ctgatgat 29316057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 16566525 - 16566320
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566525 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 16566426  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16566425 cccgttaaacataaggaaactattcttaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtagact 16566326  T
Q  421 gatgat 426  Q
    ||||||    
T  16566325 gatgat 16566320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 17691647 - 17691440
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17691647 acaaggcatttctttattgattttgttttctttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 17691548  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  17691547 accccattaaacataaggaaactattcttaaagtatccgtagtcaagctttagtgagaagtgggatatcattaaagcataaagactattatgtaggtaga 17691448  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  17691447 ctgatgat 17691440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 189182 - 188977
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  189182 aaggcatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 189083  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  189082 cccattaaacataaggaaactattcttaaagtatttgtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 188983  T
Q  421 gatgat 426  Q
    ||||||    
T  188982 gatgat 188977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 25537364 - 25537159
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  25537364 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaataattagtccgtttaatggaacattaagtataactttattgtgagac 25537265  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25537264 cccgttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtagact 25537165  T
Q  421 gatgat 426  Q
    ||||||    
T  25537164 gatgat 25537159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 11651725 - 11651930
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11651725 aaggcatttctttattgattttgatttgtttcaaaataataaagtccctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 11651824  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||||||||| |||||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  11651825 cccattaaaaataaggaaactattctaaaagtatcagtagtcaagctttattgagaagtgagatatcattaaagcatagagactattatgtgggtagact 11651924  T
Q  421 gatgat 426  Q
    ||||||    
T  11651925 gatgat 11651930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 13359474 - 13359269
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||| ||    
T  13359474 aaggcatttatttatttattttgttttgtttcaaaataataaagtccctagaatagttagttcgcttaatggagcattaagtataacttaatcgtgaaac 13359375  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
     |||||||||||||  | | |||| | ||||||||||||||||| |||| ||| ||| ||||| | ||||||||| ||||||||||||| | | ||||||    
T  13359374 tccattaaacataaaaacattatttttaaagtatccgtagtcaacctttattgtgaaatgggacaacattaaagcgtagagactattatatggatagact 13359275  T
Q  421 gatgat 426  Q
    ||||||    
T  13359274 gatgat 13359269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16963576 - 16963702
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16963576 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccaagtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 16963675  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || ||||||||||||||||||||||||    
T  16963676 gtaaaagaagttgactccgagatttat 16963702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16927849 - 16927975
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||| |||||||||||||||||||    
T  16927849 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcttgtgactagtgttggacgtgctttgaa 16927948  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  16927949 gtcaaagaagttgactccgagatttat 16927975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 16626926 - 16627045
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16626926 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16627025  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16627026 gtcaaagaagttgaccccga 16627045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24313377 - 24313496
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  24313377 agagttatcatgataagcataggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 24313476  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  24313477 gtcaaagaagttgaccccga 24313496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29592129 - 29592248
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  29592129 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 29592228  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  29592229 gtcaaagaagttgaccccga 29592248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 19864759 - 19864633
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||| |||||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||||    
T  19864759 agagttatcatgataagtgcagaaaagatcttgagtttcaagaaggagaccacgtgttttttagagtcactcctgtgactggtgttggatgtgctttgaa 19864660  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  19864659 gtcaaagaagttgactccgagatttat 19864633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21833190 - 21833316
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| ||||||| || ||||||||| ||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  21833190 agagttatcatgataagcgcaggaaagatcttgaatttcaagaaggaaaccacatgtttttgagagtcactcctgtgactggtgttggaggtgctttgaa 21833289  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21833290 gtcaaagaagttgactccgagatttat 21833316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22078897 - 22079023
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||| ||||||| |||||||||| |||||||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||    
T  22078897 agagttatcatgataagcttaggaaagatcttgagtttcaagaaggagaccacgtatttttgagagtcactcctgtgattggtgttggacgagctttgaa 22078996  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||    
T  22078997 gtcaaagaagttgactcctagatttat 22079023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25610070 - 25610196
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| |||||||||| ||||||||||||||  |||||||||||||||| |||||||| ||||||||||||||||||||    
T  25610070 agagttaccatgataagcgtaggaaagatcttgagtttcaagaaggagaccacatgtttttgagagtcacacctgtgaccggtgttggacgtgctttgaa 25610169  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||| ||||||||||||    
T  25610170 gtcaaagaagttgattccgagatttat 25610196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 25765499 - 25765624
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||| ||||||||||||| | |||||||||||||||||||||||||||    
T  25765499 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgcttttgagagtcacgc-tgtgactggtgttggacgtgctttgaa 25765597  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  25765598 gtcaaagaagttgactccgagatttat 25765624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12498098 - 12497972
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||    
T  12498098 agagttatcatgataagcgcaggaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcttgtgaccggtgttggacgtgccttgaa 12497999  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||||||||||||||||||||    
T  12497998 ttcaaagaagttgactccgagatttat 12497972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 12505427 - 12505301
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||    
T  12505427 agagttatcatgataagcgcaggaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcttgtgaccggtgttggacgtgccttgaa 12505328  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||||||||||||||||||||    
T  12505327 ttcaaagaagttgactccgagatttat 12505301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 12510803 - 12510929
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| || ||||||||||| ||||||||||||||||||| |||||| |||||||||||||| |||||    
T  12510803 agagttatcatgataagcgcaggaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcttgtgaccggtgttggacgtgccttgaa 12510902  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||||||||||||||||||||    
T  12510903 ttcaaagaagttgactccgagatttat 12510929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 18408154 - 18408278
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| |||||||||||||||||| |||||||||| ||||||| |||||| || ||||||||||| |||| ||||||||||||||||||||| |||||||    
T  18408154 agttaccatgataagcgtaggaaagatcttgagtttcaagaagaagaccacgtatttttgagagtaactcgtgtgactggtgttggacgtgccttgaagt 18408253  T
Q  103 caaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||    
T  18408254 caaagaagttgactccgagatttat 18408278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22762664 - 22762790
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||  ||||||||||||||| | |||||||||| |||||||||||||| || ||| ||||||||||||||||||||||||||||||| ||||||||    
T  22762664 agagttacaatgataagcgtaggacagatcttgagtttcaagaaggagaccacgtatttgtgagagtcactcctgtgactggtgttggacgagctttgaa 22762763  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||| |||||||||||    
T  22762764 gtcaaagaagttgaccccgagatttat 22762790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23078541 - 23078415
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| ||||| ||||| || || |||||||||||||||||||||||||||||||| || || |||||    
T  23078541 agagttatcatgataagcgtaggaaagaccttgagtttcaagagggagatcacgtatttttgagagtcactcctgtgactggtgttgggcgcgcattgaa 23078442  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  23078441 gtcaaagaagttgactccgagatttat 23078415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2875012 - 2875131
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| || ||||||| |||||||||||||| | ||||||||||||||||||| |||||||||| ||||||||||||||    
T  2875012 agagttatcatgataagcgtagaaaagattttgagtttcaagaaggagaccacgagtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 2875111  T
Q  101 gtcaaagaagttgactccga 120  Q
    |||||| |||||||| ||||    
T  2875112 gtcaaataagttgaccccga 2875131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28263406 - 28263525
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28263406 agagttatcatgataagcgtagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 28263505  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  28263506 gtcaaagaagttgaccccga 28263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28342155 - 28342274
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28342155 agagttatcatgataagcgtagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 28342254  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  28342255 gtcaaagaagttgaccccga 28342274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27331642 - 27331768
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||| ||| | |||||||| |||||||| || || || |||||||||||||||||||||||||||||||||||||| |||||    
T  27331642 agagttaccatgataagcgtagaaaagaccttgagtttcaagaaggggatcacgtatttttgagagtcactcctgtgactggtgttggacgtgcattgaa 27331741  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || || |||||||||||||||||||||    
T  27331742 gtaaaggaagttgactccgagatttat 27331768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 27392382 - 27392508
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||| ||| | |||||||| |||||||| || || || |||||||||||||||||||||||||||||||||||||| |||||    
T  27392382 agagttaccatgataagcgtagaaaagaccttgagtttcaagaaggggatcacgtatttttgagagtcactcctgtgactggtgttggacgtgcattgaa 27392481  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || || |||||||||||||||||||||    
T  27392482 gtaaaggaagttgactccgagatttat 27392508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 25112620 - 25112505
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||||||||||||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  25112620 ttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaagtca 25112521  T
Q  105 aagaagttgactccga 120  Q
    |||||| |||| ||||    
T  25112520 aagaagctgaccccga 25112505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 1543293 - 1543412
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||||||||| || ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| || |||||||||||    
T  1543293 agagttaccatgataagcgcagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtagggcgtgctttgaa 1543392  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  1543393 gtcaaagaagttgaccccga 1543412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 5839428 - 5839543
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||||||||   ||||||||||||||||||| |||| ||||| |||||||| |||||    
T  5839428 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccacacgtttttgagagtcactcctatgacaggtgtaggacgtgcgttgaa 5839527  T
Q  101 gtcaaagaagttgact 116  Q
    ||| ||||||||||||    
T  5839528 gtctaagaagttgact 5839543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27187508 - 27187389
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| || ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27187508 agagttatcatgataagcgaagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 27187409  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||| ||||    
T  27187408 gtcgaagaagttgaccccga 27187389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27261732 - 27261851
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| || ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27261732 agagttatcatgataagcgaagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 27261831  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||| ||||    
T  27261832 gtcgaagaagttgaccccga 27261851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28292581 - 28292700
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| |||| ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28292581 agagttatcatgataagtgtagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 28292680  T
Q  101 gtcaaagaagttgactccga 120  Q
    || |||||||||||| ||||    
T  28292681 gttaaagaagttgaccccga 28292700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 25750881 - 25750762
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||  |||||||||| ||||||||||| ||||||||| |||||||||||| |||||| |||||  ||||||| |||||    
T  25750881 agagttaccatgacaagcgtagaaaggatcttgagtttcaagaaggagatcatgtgtttctgagagtcactcttgtgacgggtgtaagacgtgcgttgaa 25750782  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  25750781 gtctaagaagttgactccga 25750762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 25751018 - 25750900
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||  |||||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||| |||||    
T  25751018 agagttaccatgacaagcgtagaaaggatcttgagtttcaagaaggagatcatgtgtttctgagagtcactcctgtgacgggtgtaggacgtgcgttgaa 25750919  T
Q  101 gtcaaagaagttgactccg 119  Q
     || ||||||| |||||||    
T  25750918 atctaagaagtggactccg 25750900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 258 - 426
Target Start/End: Complemental strand, 20553755 - 20553587
Alignment:
Q  258 aataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccg 357  Q
    ||||||||| |||| |||| |||||||||||||| || ||||||||  ||||||| |||||| ||||||||| ||||| | | |||||| |||| |||||    
T  20553755 aataaagtctctaggatagctagtccgtttaatgaaatattaagtacgacttaatcgtgagatcccattaaatataagaatattattcttaaagcatccg 20553656  T
Q  358 tagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    |||| ||  ||| ||| |||||| ||||  ||||||||||| ||| | |||||| ||||||||||||||    
T  20553655 tagtgaatttttattgtgaagtgagataaaattaaagcataaagatttttatgttggtagactgatgat 20553587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 21471673 - 21471554
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||  |||||||||| ||||||||||| ||||||||| |||||||||||||| |||| || || |||||||| |||||    
T  21471673 agagttaccatgacaagcgtagaaaggatcttgagtttcaagaaggagatcatgtgtttctgagagtcactcctatgacgggggtaggacgtgcgttgaa 21471574  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  21471573 atctaagaagttgactccga 21471554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 25768263 - 25768148
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||  |||||||||| ||||||||||| ||||||||| |||||||||||| | |||| ||||| |||||||| |||||    
T  25768263 agagttaccatgacaagcgtaggaaggatcttgagtttcaagaaggagatcatgtgtttctgagagtcactcttatgacgggtgtaggacgtgcgttgaa 25768164  T
Q  101 gtcaaagaagttgact 116  Q
    ||| ||||| ||||||    
T  25768163 gtctaagaaattgact 25768148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 17032581 - 17032515
Alignment:
Q  54 gtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    ||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||||||| ||||    
T  17032581 gtgtttttgagagtcactcctatgactggtgtgggacgtgcgttgaagtcaaagaagttgaccccga 17032515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 17691737 - 17691683
Alignment:
Q  129 ttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  17691737 ttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 17691683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 18197756 - 18197882
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||| ||||| | ||| |||| ||||| ||| | ||||| ||| ||| |||||||| ||||||  |||| ||||| |  |||||    
T  18197756 agagttatcatgataagcgtcggaaagaccttaagtttcaagagggatatcatgtatttctgaaagtcactcttgtgacaagtgtaggacgcgaattgaa 18197855  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  18197856 gtcaaagaagttgactccgaggtttat 18197882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 15459400 - 15459291
Alignment:
Q  9 catgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaaga 108  Q
    ||||| |||||||||||| |||||||||| || ||||| |||||||| ||| |||| || |||||| |||| ||||| |||||||| |||||||| | ||    
T  15459400 catgacaagcgtaggaaagatcttgagtttcaggaaggtgaccatgtttttctgagggttactcctatgacaggtgtaggacgtgcattgaagtcgagga 15459301  T
Q  109 agttgactcc 118  Q
    ||||||||||    
T  15459300 agttgactcc 15459291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 257 - 426
Target Start/End: Complemental strand, 17850663 - 17850495
Alignment:
Q  257 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatcc 356  Q
    |||||||||||||| ||||| ||||  ||||  |||||||||| |||  |||||||||||| | || |||||| | ||||| |||||||| ||| |||||    
T  17850663 taataaagtccctataatagctagtttgtttgttggaacattatgtaagacttaattgtgatatccaattaaaaacaaggacactattcttaaattatcc 17850564  T
Q  357 gtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
     |||||||||||| ||| |||||   ||| |||| ||| ||| |||||||||| | ||||||||||||||    
T  17850563 atagtcaagcttt-ttgtgaagtcaaataacattcaagtatatagactattatatgggtagactgatgat 17850495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 19879370 - 19879253
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| || | ||||| || ||||| |||||    
T  19879370 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatggcaggtgtaggccgtgcattgaa 19879271  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  19879270 atctaagaagttgactcc 19879253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22796841 - 22796958
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  22796841 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttactcctatgacgggtgtaggacgtgcattgaa 22796940  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  22796941 gtctaggaagttgactcc 22796958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 17415529 - 17415441
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  17415529 cttgagtttcaagagggagatcatgtgtttatgagagttactcctatgacgggtgtaggacgtgcattgaagtctaagaagttgactcc 17415441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27381551 - 27381495
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  27381551 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27381495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27471934 - 27471878
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  27471934 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtttcatg 27471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 242 - 426
Target Start/End: Original strand, 27925772 - 27925961
Alignment:
Q  242 tgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacat---taagtata--acttaattgtgagaccccattaaacataagg 336  Q
    |||||||||||||||||||||||||| |||||||  ||||  |||||| |||||||   ||||| |   ||||||| ||||||| |||||||||  |||     
T  27925772 tgttttgtttcaaaataataaagtccttagaataactagtatgtttaacggaacataattaagtgtgtgacttaatcgtgagactccattaaactaaaga 27925871  T
Q  337 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    ||| |||||| ||||||||  ||||||| |||| ||  ||||||| ||| |||| ||||| | |||||||||||| | || |||||||||    
T  27925872 aaattattcttaaagtatctctagtcaaactttatttggaagtggtatagcattgaagcacaaagactattatgtggataaactgatgat 27925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29308798 - 29308854
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29308798 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29308854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 29315758 - 29315814
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  29315758 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 29315814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14131388 - 14131503
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | || ||||| || |||||||| ||||||||| |||| ||||||||| |||| ||||| || ||||| |||||    
T  14131388 agagctatcatgacaagcgtaggaaggacctggagtttcaggaaggagatcatgtgtttctgagggtcactcctatgacaggtgtaggtcgtgcattgaa 14131487  T
Q  101 gtcaaagaagttgact 116  Q
    ||| ||||||||||||    
T  14131488 gtctaagaagttgact 14131503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18794762 - 18794643
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| || ||||||||| | ||| |||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  18794762 agagctatcatgacaatcgtaggaaagaccttcagtttcaagagggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgccttaaa 18794663  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  18794662 atctaagaagttgactccga 18794643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 21564341 - 21564460
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| || ||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  21564341 agagctatcatgacaaacgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctttgacaggtgtaggccgtgcattaaa 21564440  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  21564441 atctaagaagttgactccga 21564460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1640844 - 1640718
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||  | ||||| ||  | |||||||| ||||||||| | |||||||| |||||||| |||||||| ||||| |||||    
T  1640844 agagttatcatgacaagcgtagaaaggaccttgaattttaggaaggagatcatgtgtttctaagagtcacccctgtgacaggtgttggtcgtgccttgaa 1640745  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     || ||||||||||| ||||| |||||    
T  1640744 atcgaagaagttgaccccgaggtttat 1640718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 238 - 411
Target Start/End: Original strand, 8509941 - 8510115
Alignment:
Q  238 attttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgaga-ccccattaaacataagg 336  Q
    ||||| |||||||| ||||||||||||||  ||||||| ||||||  ||| ||||||||||| |||  |||||||| ||||| |||||||||| || |||    
T  8509941 attttattttgttttaaaataataaagtctatagaataattagtctatttgatggaacattatgtacgacttaattatgagacccccattaaatatgagg 8510040  T
Q  337 aaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgt 411  Q
    |   |||| | |||||||  ||||| ||||||| ||  ||| || |||| ||||||| |||| ||||||||||||    
T  8510041 atgatattattaaagtatatgtagttaagctttattatgaaatgagatagcattaaaacataaagactattatgt 8510115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11287807 - 11287924
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||| ||| |||| ||||| || ||||| || ||    
T  11287807 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcacccctatgacgggtgtaggccgtgcattaaa 11287906  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  11287907 atctaagaagttgactcc 11287924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 34645795 - 34645912
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||| ||||||||| |||| ||||| || ||||| || ||    
T  34645795 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagggtcactcctatgacaggtgtgggtcgtgcattaaa 34645894  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  34645895 atctaagaagttgactcc 34645912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 17684768 - 17684712
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  17684768 tgttggaataagccctaatagccaatctatgttgaatgggtttggctttgtatcatg 17684712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 11291884 - 11291818
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagt 67  Q
    ||||||||||||||||| |||| ||| |||||||||| || ||||||||||| ||||||||||||||    
T  11291884 agagttatcatgataagtgtagaaaagatcttgagtttcaggaaggagaccacgtgtttttgagagt 11291818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 127 - 181
Target Start/End: Original strand, 11651630 - 11651684
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatca 181  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||    
T  11651630 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatca 11651684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10469058 - 10469175
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||||||||| |||||    
T  10469058 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgcattgaa 10469157  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  10469158 gtcgaggaagttgactcc 10469175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11280714 - 11280831
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| |||||| |||| ||| |||| ||||| |||| ||| || ||    
T  11280714 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagaatcacacctatgacaggtgtaggacatgcattaaa 11280813  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  11280814 atctaagaagttgactcc 11280831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 25537461 - 25537405
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||||||||||||||||| || |||| |||||||||||||    
T  25537461 tgttggattaagccctaatagccaatctatattgactgagtttggctttgtatcatg 25537405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 226 - 281
Target Start/End: Complemental strand, 31258120 - 31258065
Alignment:
Q  226 atttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagt 281  Q
    |||||||||||| |||||||||||||||||||||||||||| ||| |||| |||||    
T  31258120 atttctttattgcttttgttttgtttcaaaataataaagtctctaaaataattagt 31258065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 257 - 425
Target Start/End: Complemental strand, 20736773 - 20736604
Alignment:
Q  257 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaa-actattctcaaa-gtat 354  Q
    ||||||||| |||||||||| |||| ||| |||||| | ||||||| | |||||||  |||||   |||||| ||||| ||| | |||||| ||| ||||    
T  20736773 taataaagttcctagaatagatagttcgtgtaatggtatattaagtttgacttaatcatgagattacattaa-cataaagaacattattcttaaatgtat 20736675  T
Q  355 ccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatga 425  Q
    | |||||||||||||  | |||| |||||||  | |||||| | |||||||||||||| ||||||||||||    
T  20736674 ctgtagtcaagctttaataagaactgggataataataaagcgtcgagactattatgtatgtagactgatga 20736604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 16098122 - 16098005
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| || |  || || ||||||||||||||||| |  |||||||| |||||||| |||||||||||    
T  16098122 agagttatcatgataagaggagaaaggatattgagtttcaggttggtgatcatgtgtttttgagagtgaaacctgtgaccggtgttggtcgtgctttgaa 16098023  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  16098022 gtgtaggaagttgactcc 16098005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16382582 - 16382699
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||| ||    
T  16382582 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttaaa 16382681  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  16382682 gtgtaggaagttgactcc 16382699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18838117 - 18838234
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||| | || | ||||||||| |||||||| | |||||||||    
T  18838117 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgtgggtgaatcctgtgaccggtgttggtcatgctttgaa 18838216  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  18838217 gtgtaggaagttgactcc 18838234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 13359560 - 13359512
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||| |||||||||||||||||||| |||||||||  ||||||||||||    
T  13359560 taagtcctaatagccaatctatattcattgggtttgactttgtatcatg 13359512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 16566611 - 16566563
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  16566611 taagccctaatagccaatctatgttgattgagtttgactttgtatcatg 16566563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 15078623 - 15078690
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||||||||| | | ||| |||||||||||||| |||||||||||||  | ||||||||||||    
T  15078623 catgtatttttgagactgaatccagtgactggtgttggtcgtgctttgaagtgtaggaagttgactcc 15078690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18801014 - 18800899
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| || || ||||| ||| ||||||| |||||| |||| |||||  ||||||  |||||    
T  18801014 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggggatcatgtatttctgagagttactcctatgacgggtgtaagacgtgaattgaa 18800915  T
Q  101 gtcaaagaagttgact 116  Q
    ||| ||| ||||||||    
T  18800914 gtcgaagcagttgact 18800899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 189281 - 189221
Alignment:
Q  126 atgttggaataagccctaatagccaatcta---tattgattgggtttagctttgtatcatg 183  Q
    |||||||| ||||||||||||  |||||||   |||||||||||||| |||||||||||||    
T  189281 atgttggagtaagccctaataatcaatctagtatattgattgggtttggctttgtatcatg 189221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 27560855 - 27560945
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| || || ||||| ||| | ||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  27560855 cttgagtttcaagagggtgatcatgtatttctaagagttactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 27560945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1648993 - 1649094
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||||||    
T  1648993 agagctatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttgaa 1649092  T
Q  101 gt 102  Q
    ||    
T  1649093 gt 1649094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 22259990 - 22259925
Alignment:
Q  235 ttgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaa 300  Q
    ||||||||||| |||| |||||||||||| |||||| ||||  |||||| ||||||  ||||||||    
T  22259990 ttgattttgttatgttgcaaaataataaactccctaaaataactagtccatttaatataacattaa 22259925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23996320 - 23996203
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| ||||  || || || |||||||| || || | |||| |||| || ||||| |||||||||||    
T  23996320 agagttatcatgataagaggaggaaggatattgagtttcaagttggtgatcacgtgtttttaagggtgaatcctatgaccggagttggtcgtgctttgaa 23996221  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  23996220 gtgtaggaagttgactcc 23996203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24364484 - 24364367
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| |||||  ||||    
T  24364484 agagttaccatgacaagcggagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgtgcgctgaa 24364385  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  24364384 gtcgagaaagttgactcc 24364367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25743296 - 25743413
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || || ||||||||||| |  | || |||||| |||||||| |||||||||||    
T  25743296 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcaagtgtttttgagggagaatcttgtgaccggtgttggtcgtgctttgaa 25743395  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  25743396 gtgtaggaagttgactcc 25743413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 14381705 - 14381793
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||||| | ||||||||||||    
T  14381705 cttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 14381793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 196; Significance: 1e-106; HSPs: 4)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 7141 - 6934
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7141 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaactgtgag 7042  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7041 accctattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 6942  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  6941 ctgatgat 6934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 14157 - 13950
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  14157 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctacaatagttagtccgtttaatggaacattaagtataacttaactgtgag 14058  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  14057 accccattaaacataaggaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtaggtaga 13958  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  13957 ctgatgat 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 7233 - 7177
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  7233 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 7177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 14249 - 14193
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||| |||| | |||||||||||    
T  14249 tgttggaataagccctaatagccaatctatattgattgagtttggttttgtatcatg 14193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 196; Significance: 1e-106; HSPs: 74)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 21940665 - 21940872
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940665 acaatgcatttctttattgattttgttttgtttcaaaataataaagttcctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21940764  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21940765 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 21940864  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  21940865 ctgatgat 21940872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 221 - 420
Target Start/End: Original strand, 28554885 - 28555084
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554885 aaggcatttctttattgattttgtttagtttcaaaataataaaatacctaaaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 28554984  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28554985 cccattaaacataatgaaactattctaaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 28555084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 22171491 - 22171694
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22171491 aaggcatttccttattgattttgttttatttcaaaataataaagtccctagaatagttagtctgtttaatggaacattaagtataacttaattgtgagac 22171590  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22171591 cccattaaacata--gaaactattctcaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcatagagactattatgtaggtagact 22171688  T
Q  421 gatgat 426  Q
    ||||||    
T  22171689 gatgat 22171694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 225 - 426
Target Start/End: Original strand, 6094129 - 6094330
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  6094129 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 6094228  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  6094229 ttaaacataaggaaactatttttaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatatgggtagagtgatg 6094328  T
Q  425 at 426  Q
    ||    
T  6094329 at 6094330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 225 - 426
Target Start/End: Original strand, 24642655 - 24642856
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  24642655 catttctttattgattttgttttgtttcaaaatcataaagtccctagaattgttagtccgtttaatggaacattaagtataacttaattgtgagaccccg 24642754  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||||||||| |||||||||||||||| ||||||||||||    
T  24642755 ttaaacataaggaaactattcttaaagtattcgtagtcaagctttattgagaagtgagatatcattaaagtatagagactattatgtgggtagactgatg 24642854  T
Q  425 at 426  Q
    ||    
T  24642855 at 24642856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 225 - 352
Target Start/End: Original strand, 24636860 - 24636987
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||     
T  24636860 catttctttcttgattttgttttgtttcaaaataataaagtccctagaatagttagtccttttaatggaacattaagtataacttaattgtgagaccccg 24636959  T
Q  325 ttaaacataaggaaactattctcaaagt 352  Q
    |||||||||||||||||||||| |||||    
T  24636960 ttaaacataaggaaactattcttaaagt 24636987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 19978241 - 19978115
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||  |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19978241 agagttatcatgataagcgtagaaaggatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 19978142  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  19978141 gtcaaagaagttgactccgagatttat 19978115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21167044 - 21167170
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  21167044 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaa 21167143  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21167144 gtcaaagaagttgactccgagatttat 21167170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 21251216 - 21251090
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  21251216 agagttatcatgataagcgtaggaaagatcttgagtttcaataaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgagctttgaa 21251117  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21251116 gtcaaagaagttgactccgagatttat 21251090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21394372 - 21394498
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21394372 agagttatcatgataagcgcatgaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgttctttgaa 21394471  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21394472 gtcaaagaagttgactccgagatttat 21394498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21788865 - 21788991
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21788865 agagttatcatgataagcgcatgaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgttctttgaa 21788964  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21788965 gtcaaagaagttgactccgagatttat 21788991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 30313651 - 30313777
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30313651 agagttatcatgataagcgcaggaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 30313750  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  30313751 gtcaaagaagttgactccgagatttat 30313777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15533654 - 15533528
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||| |||||  ||||||||||||||||||||||| |||||||||||||||| |||||    
T  15533654 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggtgaccacatgtttttgagagtcactcctgtggctggtgttggacgtgccttgaa 15533555  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  15533554 gtcaaagaagttgactccgagatttat 15533528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16408552 - 16408678
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||||||||||    
T  16408552 agagttatcatgataagcgcaggaaagatcttaagttccaagaaggagaccacgtattgttgagagtcactcttgtgactggtgttggacgtgctttgaa 16408651  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  16408652 gtcaaagaagttgactccgagatttat 16408678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 17674530 - 17674649
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17674530 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 17674629  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  17674630 gtcaaagaagttgaccccga 17674649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19112964 - 19112845
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19112964 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 19112865  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  19112864 gtcaaagaagttgaccccga 19112845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23650315 - 23650189
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||| ||| |||||||||| ||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| |||||    
T  23650315 agagttaccatgataagcgtagaaaagatcttgagtttcaagaaggagaccacatgtttttgagagtcactcctgtgactggtgtaggacgtgccttgaa 23650216  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  23650215 gtcaaagaagttgactccgagatttat 23650189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 32600418 - 32600292
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  32600418 agagttatcatgataagcgcaggaaggatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaa 32600319  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||| |||||||||||    
T  32600318 gtcaaagaagttgaccccgagatttat 32600292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22032306 - 22032180
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| ||||||||  ||||||||||  | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22032306 agagttatcatgataaacgtaggaaggatcttgagttttaggatggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 22032207  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||| |||||||||||||||||    
T  22032206 gtcaaagaaattgactccgagatttat 22032180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22133548 - 22133674
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| |||||||| |||||||||| || |||||||||  |||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  22133548 agagttatcatgataagtgtaggaaagatcttgagtttcaggaaggagacattgtgtttttgagagacactcatgtgactggtgttggacgtgccttgaa 22133647  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  22133648 gtcaaagaagttgactccgagatttat 22133674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22164698 - 22164824
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| || |||||||||  ||||||||||| |||||||| ||||||||||||||||||||| |||||    
T  22164698 agagttatcatgataagcgtaggaaagatcttgagtttcaggaaggagacattgtgtttttgaaagtcactcatgtgactggtgttggacgtgccttgaa 22164797  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||| ||||||||||||||||||||    
T  22164798 gtcaaataagttgactccgagatttat 22164824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 2 - 121
Target Start/End: Complemental strand, 23949162 - 23949043
Alignment:
Q  2 gagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaag 101  Q
    ||||||| ||||||||||||||||  | |||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||     
T  23949162 gagttattatgataagcgtaggaaggaccttgagtttcaagaaggagaccatgtgtttttgagagtcactcctgtgactggttttagacgtgctttgaaa 23949063  T
Q  102 tcaaagaagttgactccgag 121  Q
    ||||||||||||||||||||    
T  23949062 tcaaagaagttgactccgag 23949043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 21922242 - 21922364
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| || |||||||||||||||| |||||||||||||||||  ||||||||    
T  21922242 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtatttttgagagtcactcatgtgactggtgttggacaagctttgaa 21922341  T
Q  101 gtcaaagaagttgactccgagat 123  Q
    ||| |||||||||||||||||||    
T  21922342 gtcgaagaagttgactccgagat 21922364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22377960 - 22378086
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| || ||||||| || |||| ||| ||||| |||||||| |||||||| |||||||||||||||||||| |||||    
T  22377960 agagttatcatgataagcgtaggaaagatattgagtttcaggaagcagatcatgtatttttgagggtcactccagtgactggtgttggacgtgcattgaa 22378059  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  22378060 gtcaaagaagttgactccgagatttat 22378086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22384135 - 22384261
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| || ||||||| || |||| ||| ||||| |||||||| |||||||| |||||||||||||||||||| |||||    
T  22384135 agagttatcatgataagcgtaggaaagatattgagtttcaggaagcagatcatgtatttttgagggtcactccagtgactggtgttggacgtgcattgaa 22384234  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  22384235 gtcaaagaagttgactccgagatttat 22384261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22046647 - 22046521
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| || |||||  ||||||||||  | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  22046647 agagttatcatgataaacgcaggaaggatcttgagttttaggaaggagaccacgtgtttttgagagtcactccagtgactggtgttggacgtgctttgaa 22046548  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||| ||||||||||| |||||    
T  22046547 gtcaaagaaattgactccgaggtttat 22046521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20018257 - 20018376
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  20018257 agagttatcatgacaagcgtagaaaagatcttgaatttgaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 20018356  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  20018357 gtcaaagaagttgaccccga 20018376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19485377 - 19485491
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||  | ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19485377 agagttatcatgataagcgtagaaaagatcttgaatttaaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 19485476  T
Q  101 gtcaaagaagttgac 115  Q
    ||| |||||||||||    
T  19485477 gtcgaagaagttgac 19485491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22120681 - 22120795
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| |||||||| |||||    
T  22120681 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtgggacgtgcattgaa 22120780  T
Q  101 gtcaaagaagttgac 115  Q
    ||||| |||||||||    
T  22120781 gtcaaggaagttgac 22120795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 22987475 - 22987359
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | ||||| || ||||||||||| ||||| ||||| ||||||||||| ||||||| |||||||| ||| |||||    
T  22987475 agagttatcatgataagcgtaggaaagaccttgattttcaagaaggagatcatgtattttttagagtcactccagtgactgatgttggacatgcattgaa 22987376  T
Q  101 gtcaaagaagttgactc 117  Q
    |||||||||||||||||    
T  22987375 gtcaaagaagttgactc 22987359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 39 - 127
Target Start/End: Complemental strand, 15441417 - 15441329
Alignment:
Q  39 caagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    |||||||| |||||  ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  15441417 caagaaggtgaccacatgtttttgagagtcactcctgtggctggtgttggacgtgccttgaagtcaaagaagttgactccgagatttat 15441329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 20388373 - 20388259
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||  | |||||||| ||||||||||||||||||||| ||||||||||||  ||||| |||||||| |||||||||||    
T  20388373 agagttatcatgacaagcgtagaaaggaccttgagtttcaagaaggagaccatgtgtttctgagagtcactctagtgacaggtgttggtcgtgctttgaa 20388274  T
Q  101 gtcaaagaagttgac 115  Q
    ||| |||||||||||    
T  20388273 gtctaagaagttgac 20388259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 4 - 127
Target Start/End: Original strand, 20396635 - 20396758
Alignment:
Q  4 gttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtc 103  Q
    ||||||||||||||||||| ||| | |||||||| || |||||||||||||| ||||| ||||||||||||||||| ||||| |||||||| ||||||||    
T  20396635 gttatcatgataagcgtagaaaagaccttgagtttcaggaaggagaccatgtattttttagagtcactcctgtgaccggtgtaggacgtgcattgaagtc 20396734  T
Q  104 aaagaagttgactccgagatttat 127  Q
    || |||  ||||||  ||||||||    
T  20396735 aaggaaactgactctaagatttat 20396758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21681977 - 21682094
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  21681977 agagttatcatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttactcctatgacgggtgtaggacgtgcattgaa 21682076  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  21682077 gtctaagaagttgactcc 21682094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 22070106 - 22070164
Alignment:
Q  125 tatgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  22070106 tatgttggaataagccctaatagccaatctatattgattgggtttggttttgtatcatg 22070164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20008124 - 20008007
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||||||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  20008124 agagttaccatgacaagcgtaggaaggcccttgagttccaagagggagatcatgtgtttctgagagttactcctatgacgggtgtaggacgtgcattgaa 20008025  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| || ||| |||||||    
T  20008024 gtctaacaaggtgactcc 20008007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 21940573 - 21940629
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  21940573 tgttggaataagccctaatagccaatctatattgattggttttggctttgtatcatg 21940629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 231 - 423
Target Start/End: Complemental strand, 38232570 - 38232380
Alignment:
Q  231 tttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaac 330  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||| |||||||  |   ||| ||||||||||||  ||| || |||||||||    
T  38232570 tttattgattttgttttatttcaaaataataaa-tctctagaatagttagtctgtttaataaatttttaggtataacttaatcatgacactccattaaac 38232472  T
Q  331 ataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgat 423  Q
     |||  | | |||||| |||||||  |||||||| |||| |||  ||||| ||||   |||||||||| | |||||| ||| |||||||||||    
T  38232471 gtaa-aatagtattcttaaagtatttgtagtcaaactttattgtaaagtgagatagtcttaaagcataaaaactattttgtgggtagactgat 38232380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 20010407 - 20010526
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||||| |||    |||||||| ||||| ||||| ||||||||| |||||||||||||  |||| ||||| || ||||| |||||    
T  20010407 agagttaccatgacaagcgtaagaaggcgcttgagtttcaagagggagatcatgtgtttctgagagtcactccgatgacgggtgtgggtcgtgcgttgaa 20010506  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  20010507 gtctaagaagttgactccga 20010526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 6094031 - 6094087
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  6094031 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 6094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 22171396 - 22171452
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  22171396 tgttggaataagccctaatagccaatctatattgattgggtttgattttgtatcatg 22171452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 23655172 - 23655084
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| ||||| ||| ||||| ||||||| |||||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  23655172 cttgagtttcaagacggagatcatttgtttctgagagttactcctatgacgggtgtaggacgtgcattgaagtctaagaagttgactcc 23655084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 24642556 - 24642608
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtat 179  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  24642556 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtat 24642608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 19851656 - 19851566
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| ||||| ||||||||| |||||||||||||  |||| | ||| || ||||| |||||||| ||||||||||||||||    
T  19851656 cttgagtttcaagagggagatcatgtgtttctgagagtcactccgttgacggttgtaggtcgtgcgttgaagtctaagaagttgactccga 19851566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 19857692 - 19857602
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| ||||| ||||||||| |||||||||||||  |||| | ||| || ||||| |||||||| ||||||||||||||||    
T  19857692 cttgagtttcaagagggagatcatgtgtttctgagagtcactccgttgacggttgtaggtcgtgcgttgaagtctaagaagttgactccga 19857602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 410
Target Start/End: Complemental strand, 32873019 - 32872857
Alignment:
Q  249 tttcaaaataataaagtccctagaatagttagtccgttta-atggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctc 347  Q
    ||||||||||||||||||| || |||||||  ||| |||| || ||||||||||||| |||||||||||||| | |||| || | |  || | || | |     
T  32873019 tttcaaaataataaagtccttataatagttcatccatttatatagaacattaagtatgacttaattgtgagatctcattgaaaagagtgacaatactatt 32872920  T
Q  348 aaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatg 410  Q
    ||| |||  ||||| ||| ||| ||| ||||||||||| ||| ||||||||||||||||||||    
T  32872919 aaaatatttgtagttaagatttattgtgaagtgggataacatcaaagcatagagactattatg 32872857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 22051135 - 22051018
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||||||||| |||||    |||||||| ||||| || || ||||| ||||||| ||| |||||  |||| ||||| |||||||||||||| |    
T  22051135 agttaccatgataagcggaggaaggcccttgagtttcaagagggtgatcatgtatttttgaaagttactccgatgacgggtgtaggacgtgctttgaaat 22051036  T
Q  103 caaagaagttgactccga 120  Q
    ||| ||||||||||||||    
T  22051035 caaggaagttgactccga 22051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 28554791 - 28554847
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||| | |||||||||||| |||||||||||||    
T  28554791 tgttggagtaagccctaatagccaatctttgttgattgggtttggctttgtatcatg 28554847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 804230 - 804297
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  804230 catgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaagtcgaggaagttgactcc 804297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 14565366 - 14565299
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  14565366 catgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaagtcgaggaagttgactcc 14565299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 16265127 - 16265242
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||| ||||||||||||    
T  16265127 agttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtctttctgagggtcactcctttgacgggtgttggatgtgctttgaagt 16265226  T
Q  103 caaagaagttgactcc 118  Q
    | | ||||||||||||    
T  16265227 cgaggaagttgactcc 16265242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 240 - 298
Target Start/End: Original strand, 2375027 - 2375085
Alignment:
Q  240 tttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacatt 298  Q
    |||||||||||||||||||||||| |||||| |||| ||||||  ||||||||||||||    
T  2375027 tttgttttgtttcaaaataataaactccctataataattagtcaatttaatggaacatt 2375085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6679385 - 6679268
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| |||||||||||    
T  6679385 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgtgctttgaa 6679286  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  6679285 gtcgagaaagttgactcc 6679268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 118
Target Start/End: Complemental strand, 27347436 - 27347383
Alignment:
Q  65 agtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  27347436 agtcactcctttgacgggtgttggacgtgctttgaagtcgaggaagttgactcc 27347383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28982631 - 28982514
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||  |||| |||||||||||||| |||||    
T  28982631 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactccgttgacgggtgttggacgtgccttgaa 28982532  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  28982531 gtcgaggaagttgactcc 28982514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28987851 - 28987734
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||  |||| |||||||||||||| |||||    
T  28987851 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactccgttgacgggtgttggacgtgccttgaa 28987752  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  28987751 gtcgaggaagttgactcc 28987734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 21197010 - 21197126
Alignment:
Q  2 gagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaag 101  Q
    |||||||||||||||| | || ||  || ||||||| || | ||| || ||||||||||||||||| | |||||| ||||| ||||| ||| ||||||||    
T  21197010 gagttatcatgataagaggagaaaggatattgagtttcaggtaggtgatcatgtgtttttgagagtgaatcctgtaactggagttggtcgtactttgaag 21197109  T
Q  102 tcaaagaagttgactcc 118  Q
    |  | ||||||||||||    
T  21197110 tgtaggaagttgactcc 21197126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 10920234 - 10920297
Alignment:
Q  257 taataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||| | ||||||||| |||||| ||||||||||||||||||||| | ||||| |||||||    
T  10920234 taataaaattcctagaataattagtctgtttaatggaacattaagtatgagttaatcgtgagac 10920297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 21840662 - 21840572
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| ||||| ||||||||| | ||||| |||||| | || ||||| ||| ||||  ||||||| ||||||||||||||||    
T  21840662 cttgagtttcaagagggagatcatgtgtttctaagagttactcctataacaggtgtaggaggtgcactgaagtctaagaagttgactccga 21840572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6603932 - 6603815
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| || ||||||||    
T  6603932 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgggctttgaa 6603833  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  6603832 gtcgagaaagttgactcc 6603815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16877602 - 16877719
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| || |  ||||| |||||||| ||||| || | ||| ||||| ||||| || |||||||||||    
T  16877602 agagttatcatgataagaggaggaaggatattgagtttcaggttggagatcatgtgttcttgagggtgaatccggtgaccggtgtcggtcgtgctttgaa 16877701  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  16877702 gtgtaggaagttgactcc 16877719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21324916 - 21325033
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  21324916 agagttatcatgacaagcgtagaaaggcccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggacgtgcattgaa 21325015  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  21325016 gtcgaggaagttgactcc 21325033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21850844 - 21850961
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||| | | |||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| |||||||| |||| ||||||    
T  21850844 agagctatcatgataagaggatgaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggtgttggtcgtgatttgaa 21850943  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  21850944 gtgtaggaagttgactcc 21850961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 29303961 - 29304050
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||  |||| ||||| |||||||| |||||||||| ||||||||||||    
T  29303961 tcttgagtttcaggagggtgatcatgtttttctgagggtcactccaatgacgggtgtaggacgtgcattgaagtcaaggaagttgactcc 29304050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 1266484 - 1266396
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||| ||||||| |||||  |||| ||||| |||||||| |||||||| ||||||||||||||    
T  1266484 cttgagtttcaggagggtgatcatgtatttctgagagttactccgatgacgggtgtaggacgtgcattgaagtcgaagaagttgactcc 1266396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 19863299 - 19863223
Alignment:
Q  33 gagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaa 109  Q
    ||||| || ||||| || ||||| ||||| ||||||||||| ||||| || ||||| |||||||||||||| |||||    
T  19863299 gagtttcaggaaggcgatcatgtatttttaagagtcactccggtgacgggcgttgggcgtgctttgaagtctaagaa 19863223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 19867936 - 19867860
Alignment:
Q  33 gagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaa 109  Q
    ||||| || ||||| || ||||| ||||| ||||||||||| ||||| || ||||| |||||||||||||| |||||    
T  19867936 gagtttcaggaaggcgatcatgtatttttaagagtcactccggtgacgggcgttgggcgtgctttgaagtctaagaa 19867860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 20652890 - 20652957
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||||||||||| | || |||||| |||||||| |||||||||||||  | ||||||||||||    
T  20652890 catgtatttttgagagtgaatcatgtgaccggtgttggtcgtgctttgaagtgtaggaagttgactcc 20652957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 31571378 - 31571468
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| || || ||||| ||| ||||||| |||||  |||| ||||| |||||||||||||| || |  |||||||||||||    
T  31571378 cttgagtttcaagagggtgatcatgtatttctgagagtgactccgatgacgggtgtaggacgtgctttgaaatcgagaaagttgactccga 31571468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 12305004 - 12304915
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| | || ||||||||| |||| |||||||||||||| |||||||| |  |||||||||||    
T  12305004 tcttgagtttcaggagggtgatcatgtttttcttagggtcactcctttgacgggtgttggacgtgccttgaagtcgagaaagttgactcc 12304915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Original strand, 22061968 - 22062057
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||||||| |||| || |||||| |||| ||||| |||| ||| |||||||| | ||||||||||||    
T  22061968 tcttgagtttcaggagggtgatcatgtgtttctgagggttactcctatgacgggtgtaggacatgcattgaagtcgaggaagttgactcc 22062057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 22315465 - 22315364
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |  ||||||| || |  || || ||||||||||||||||| | |||||| || ||||| || |||||||||||    
T  22315465 agagttatcatgataagaggaggaaggacattgagtttcaggttggtgatcatgtgtttttgagagtgaatcctgtaaccggtgtaggtcgtgctttgaa 22315366  T
Q  101 gt 102  Q
    ||    
T  22315365 gt 22315364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 164
Target Start/End: Original strand, 24636605 - 24636642
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattg 164  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  24636605 tgttggagtaagccataatagccaatctatattgattg 24636642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 31417010 - 31417098
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||| ||||||| |||| | |||| ||||| |||||||| |||||||| | ||||||||||||    
T  31417010 cttgagtttcaggagggtgatcatgtttttctgagagttactcttatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 31417098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 196; Significance: 1e-106; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 21330455 - 21330248
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21330455 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 21330356  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21330355 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtgga 21330256  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  21330255 ctgatgat 21330248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 18796506 - 18796713
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||| |||| ||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18796506 acaaggaatttatttgtttattttgttttgtttcaaaataacaaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 18796605  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||| | || |||||||||| | |||||| ||| |||| ||||||||||||| ||| ||||||| ||||||||||||||| ||||||||||||| ||||||    
T  18796606 acctcttttaacataaggatattattcttaaattatctgtagtcaagctttattgtgaagtggtatatcattaaagcattgagactattatgtgggtaga 18796705  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  18796706 ctgatgat 18796713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21325870 - 21325996
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  21325870 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgagctttgaa 21325969  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21325970 gtcaaagaagttgactccgagatttat 21325996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 24675328 - 24675202
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||    
T  24675328 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcacccctgtgactggtgttggacgtgctttgaa 24675229  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  24675228 gtcaaagaagttgactccgagatttat 24675202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 22757067 - 22757193
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22757067 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaagagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 22757166  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||||||||||||||||||||    
T  22757167 atcaaagaagttgactccgagatttat 22757193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23063916 - 23063790
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||    
T  23063916 agagttaccatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgttttttttagagtcactcctgtgactggtgttggacgtgctttgaa 23063817  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  23063816 gtcaaagaagttgactccgagatttat 23063790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24262209 - 24262090
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  24262209 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 24262110  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  24262109 gtcaaagaagttgaccccga 24262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16925099 - 16924980
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16925099 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16925000  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16924999 gtcaaagaagttgaccccga 16924980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16998839 - 16998720
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16998839 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16998740  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16998739 gtcaaagaagttgaccccga 16998720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 24708091 - 24708210
Alignment:
Q  6 tatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaa 105  Q
    |||||||||||||| |||||  |||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24708091 tatcatgataagcgcaggaaggatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaa 24708190  T
Q  106 agaagttgactccgagattt 125  Q
    ||||||||||||| ||||||    
T  24708191 agaagttgactcctagattt 24708210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24709872 - 24709753
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  24709872 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 24709773  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  24709772 gtcaaagaagttgaccccga 24709753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23188847 - 23188721
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||  || |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  23188847 agagttatcatgataagcgcaggaaagatcttgagtgtcaggaaggagaccacatgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 23188748  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||    
T  23188747 gtcaaagaagttgactccaagatttat 23188721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 18619807 - 18620011
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||||||| | |||||||| |||||     
T  18619807 aaggaatttctttgttgattttgttttgtttcaaaataataaagtccctataataattagtctgtttaatggagcattaagtgtgacttaattatgaga- 18619905  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||||||||||| ||||| | |||||| |||||||| || ||||| |||| ||| |||  ||||||  ||||||||||| |||||||||||| ||||| |     
T  18619906 cccattaaacaaaaggatattattcttaaagtatctgtggtcaaactttattgtgaaaagggataatattaaagcatatagactattatgtgggtaggcc 18620005  T
Q  421 gatgat 426  Q
    ||||||    
T  18620006 gatgat 18620011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 9609975 - 9609856
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  9609975 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 9609876  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  9609875 gtcaaagaagttgaccccga 9609856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16981991 - 16981872
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  16981991 agagttatcatgataagcgtagaaaagatcttgaattccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 16981892  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16981891 gtcaaagaagttgaccccga 16981872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17063556 - 17063437
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17063556 agagttatcatgataagcgtagaaaagatcttgaattccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 17063457  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  17063456 gtcaaagaagttgaccccga 17063437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17067214 - 17067095
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  17067214 agagttatcatgataagcgtagaaaagatcttgaattccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 17067115  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  17067114 gtcaaagaagttgaccccga 17067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27371108 - 27370989
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||||||    
T  27371108 agagctatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggatgtgctttgaa 27371009  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27371008 gtcaaagaagttgaccccga 27370989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23138876 - 23138750
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||||| |||| | || ||||| |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||    
T  23138876 agagttatcatgataagcgtacgaaagacctcgagtttcaagaaggagaccaggtatttttgagagtcactcttgtgactggtgttggacgagctttgaa 23138777  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||    
T  23138776 gtcaaagaagttgactcctagatttat 23138750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23550666 - 23550540
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||||| |||| | || ||||| |||||||||||||| || |||||||||||||||| |||||||||||||||||| ||||||||    
T  23550666 agagttatcatgataagcgtacgaaagacctcgagtttcaagaaggagaccaggtatttttgagagtcactcttgtgactggtgttggacgagctttgaa 23550567  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||    
T  23550566 gtcaaagaagttgactcctagatttat 23550540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10868689 - 10868570
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| ||||||||||||||||||||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  10868689 agagctatcatgataagcgtaggaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 10868590  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  10868589 gtcaaagaagttgaccccga 10868570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 28 - 127
Target Start/End: Original strand, 27377102 - 27377201
Alignment:
Q  28 atcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    |||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  27377102 atcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaagtcaaagaagttgactccgagatttat 27377201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 225 - 364
Target Start/End: Complemental strand, 19692737 - 19692598
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||  | |||||||  ||||| | ||    
T  19692737 catttctttattgattttgttttgtttcaaaataatgaagtccctagaataattagtctgtttaatggaacattaagcctgacttaatcatgagatctca 19692638  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaa 364  Q
    ||||||  ||||||| |||||| ||||||||| |||||||    
T  19692637 ttaaactaaaggaaattattcttaaagtatccttagtcaa 19692598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 21145634 - 21145753
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  21145634 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctatgacgggtgtaggacgtgctttgaa 21145733  T
Q  101 gtcaaagaagttgactccga 120  Q
     |||||||||||||| ||||    
T  21145734 atcaaagaagttgaccccga 21145753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22325460 - 22325579
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22325460 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 22325559  T
Q  101 gtcaaagaagttgactccga 120  Q
    |||||| |||||||| ||||    
T  22325560 gtcaaacaagttgaccccga 22325579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24878599 - 24878718
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| |||||||| |||||    
T  24878599 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgcattgaa 24878698  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  24878699 gtcaaagaagttgaccccga 24878718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27217855 - 27217736
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  27217855 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgccttgaa 27217756  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27217755 gtcaaagaagttgaccccga 27217736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 44386173 - 44386292
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | ||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  44386173 agagttatcatgataagcgtagaaaagaccttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 44386272  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  44386273 gtcaaagaagttgaccccga 44386292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 127
Target Start/End: Original strand, 24825887 - 24826012
Alignment:
Q  2 gagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaag 101  Q
    ||||||||||||||||||||||||| | ||||||||  | ||||||||  |||| ||||| ||||||||||||||||||||||||||||| || ||||||    
T  24825887 gagttatcatgataagcgtaggaaagaccttgagttttaggaaggagataatgtatttttaagagtcactcctgtgactggtgttggacgcgcattgaag 24825986  T
Q  102 tcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||| |||||    
T  24825987 tcaaagaagttgactccgaggtttat 24826012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 284 - 411
Target Start/End: Original strand, 20977957 - 20978084
Alignment:
Q  284 gtttaatggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 383  Q
    |||||||||||||||||| |||| |||||  ||||| ||||||||| ||||||||| |||||| |||  |||||||||||||||||  || |||||| ||    
T  20977957 gtttaatggaacattaagaataatttaatcatgagatcccattaaaaataaggaaattattcttaaaacatccgtagtcaagctttaatgtgaagtgaga 20978056  T
Q  384 tatcattaaagcatagagactattatgt 411  Q
    ||||| ||||||||||||||||||||||    
T  20978057 tatcactaaagcatagagactattatgt 20978084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23087289 - 23087163
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||| |||| ||    |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||||| ||||| |||||    
T  23087289 agagttatcatgacaagtgtagaaaggtccttgagtttcaagaaggagaccatgtgtttttgagagtcactcttgtgacaggtgttggtcgtgccttgaa 23087190  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     || ||||||||||| ||||| |||||    
T  23087189 atcgaagaagttgacgccgaggtttat 23087163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 30211521 - 30211647
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| | |||||||||||||||  |||||||||| ||||||||||||||||||||||| |||||||| | |||||| ||||||||||| ||  | ||    
T  30211521 agagttaccgtgataagcgtaggaaggatcttgagtttcaagaaggagaccatgtgttttttagagtcacccatgtgaccggtgttggacgggcgctaaa 30211620  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||  |||||||||| |||||    
T  30211621 atcaaagaaactgactccgaggtttat 30211647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 124 - 183
Target Start/End: Complemental strand, 21330552 - 21330493
Alignment:
Q  124 ttatgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  21330552 ttatgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 21330493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 253 - 426
Target Start/End: Original strand, 36270199 - 36270373
Alignment:
Q  253 aaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaag 351  Q
    |||||||||||||||||||||||||||||    |||| || ||  |||||| | ||||||| |||||||  ||||||||| || || |||||||| |||     
T  36270199 aaaataataaagtccctagaatagttagtttacttaaatgaaatgttaagtgtgacttaatcgtgagacatcattaaacacaatgacactattcttaaaa 36270298  T
Q  352 tatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
     ||||||| |||||||||  || |||| |||||| |||||||| ||| |||||||| ||| ||||||||||||||    
T  36270299 catccgtaatcaagctttagtgtgaagagggataacattaaagtataaagactattgtgtgggtagactgatgat 36270373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 426
Target Start/End: Original strand, 18822115 - 18822290
Alignment:
Q  253 aaaataataaagtccctagaatagttagtccgtttaa-tggaaca-ttaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaa 350  Q
    ||||||||||||||  |||||| |||||| ||||||| ||||| | |||||| |  |||||| ||||||| |||||||||| ||||| |||||||| |||    
T  18822115 aaaataataaagtctatagaattgttagttcgtttaaatggaaaaattaagtgtggcttaatcgtgagacaccattaaacacaaggacactattcttaaa 18822214  T
Q  351 gtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
      ||  ||| |||||||||  |  |||||||||||||||||||||| | ||| ||||||||   ||||||||||||    
T  18822215 acatatgtaatcaagctttagtttgaagtgggatatcattaaagcagatagattattatgtcaatagactgatgat 18822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 45529350 - 45529230
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||| ||||||  ||||||||||  ||||      |||||||||| |||||||||||| |||||||||||||||||||||  | ||    
T  45529350 agagttatcatgataagcctaggaaggatcttgagtttgaaga------ccatgtgtttatgagagtcactcttgtgactggtgttggacgtgcgctaaa 45529257  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||  |||||||||| |||||    
T  45529256 atcaaagaaactgactccgaggtttat 45529230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27365683 - 27365800
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||| ||||||||| |||| ||||| || ||||| || ||    
T  27365683 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagggtcactcctatgacaggtgtaggccgtgcattaaa 27365782  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  27365783 atctaagaagttgactcc 27365800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11358478 - 11358595
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||||||||||||| |||| |||||||| |||||||||||    
T  11358478 agagttaccatgacaagcggagaaaggatcttgagtttcaggagggtgatcatgtttttctgagagtcactcctttgacgggtgttggtcgtgctttgaa 11358577  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  11358578 gtcgagaaagttgactcc 11358595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 23293797 - 23293680
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  23293797 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 23293698  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  23293697 gtcgaggaagttgactcc 23293680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31830497 - 31830380
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  ||||||| || || || || || ||||| ||| |||||||||||||| |||| ||||||||||| ||||||||    
T  31830497 agagttaccatgacaagcgaagaaaggatcttgaatttcaggagggtgatcatgtttttctgagagtcactcctttgacgggtgttggacgggctttgaa 31830398  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  31830397 gtcgaggaagttgactcc 31830380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22276118 - 22276001
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| || |  || || ||||||||||||||||| | ||||||||| |||||||| |||||||||||    
T  22276118 agagttatcatgataagaggagaaaggatattgagtttcaggttggtgatcatgtgtttttgagagtgaatcctgtgaccggtgttggtcgtgctttgaa 22276019  T
Q  101 gtcaaagaagttgactcc 118  Q
    |   | ||||||||||||    
T  22276018 gggtaggaagttgactcc 22276001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24654184 - 24654067
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||| ||| |||||    
T  24654184 agagttatcatgataagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggacttgcattgaa 24654085  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  24654084 gtcgaggaagttgactcc 24654067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 1063590 - 1063473
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| || ||||||||    
T  1063590 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgggctttgaa 1063491  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  1063490 gtcgagaaagttgactcc 1063473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 12640523 - 12640640
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| || |  ||||| |||||||| ||||| || | ||| ||||| ||||| || |||||||||||    
T  12640523 agagttatcatgataagaggaggaaggatattgagtttcaggttggagatcatgtgttcttgagggtgaatccggtgaccggtgtcggtcgtgctttgaa 12640622  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  12640623 gtgtaggaagttgactcc 12640640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20832824 - 20832707
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||| || ||||||||    
T  20832824 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggtcgggctttgaa 20832725  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  20832724 gtcgagaaagttgactcc 20832707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24831791 - 24831908
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | | |||  || ||||||| ||||  || || |||||||||||||| || | |||| ||||||| || || |||||||||||    
T  24831791 agagttatcatgataagagaacgaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctatgactggagtgggtcgtgctttgaa 24831890  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  24831891 gtgtaggaagttgactcc 24831908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Original strand, 23817747 - 23817798
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||||| | || |||||| |||||||| |||||||||||||    
T  23817747 catgtgtttttgagagtgaatcttgtgaccggtgttggtcgtgctttgaagt 23817798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 24945156 - 24945089
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||||||| ||||||||||||    
T  24945156 catgtatttctgagggttactcctatgacgggtgtaggacgtgcattgaagtcaaggaagttgactcc 24945089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 28144752 - 28144701
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||||| | || ||| || ||||||||||||||||||||||    
T  28144752 catgtgtttttgagagtgaatcttgtaaccggtgttggacgtgctttgaagt 28144701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 25128436 - 25128387
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| |  | |||||||||||||||||| ||||||||    
T  25128436 catgtgtttttgagagtgaaccatgtgactggtgttggacgcgctttgaa 25128387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 390 - 426
Target Start/End: Complemental strand, 12098654 - 12098618
Alignment:
Q  390 taaagcatagagactattatgtaggtagactgatgat 426  Q
    |||| |||||||||||||||||| |||||||||||||    
T  12098654 taaaacatagagactattatgtatgtagactgatgat 12098618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19692829 - 19692773
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||| ||||||||||||| |||| ||| ||||| | |||||||||||    
T  19692829 tgttggagtaagccttaatagccaatctgtatttattaggtttggttttgtatcatg 19692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 255 - 410
Target Start/End: Complemental strand, 36802820 - 36802664
Alignment:
Q  255 aataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagaccccattaaacataaggaaactattctcaaagta 353  Q
    ||||||||||||| | ||||||||| | ||||||| ||||| ||||| | | |||||||||  |||   ||||||||| || || | |||||| |||  |    
T  36802820 aataataaagtcctttgaatagttaattcgtttaaatggaatattaaatgttacttaattgcaagatatcattaaacacaatgacattattcttaaaaca 36802721  T
Q  354 tccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatg 410  Q
    |||||| ||||| ||   ||  |||||||||| |||||||||||| ||| |||||||    
T  36802720 tccgtaatcaagattcagtgtaaagtgggataacattaaagcatatagattattatg 36802664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433 (Bit Score: 188; Significance: 1e-102; HSPs: 2)
Name: scaffold0433
Description:

Target: scaffold0433; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 7107 - 7314
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7107 acaaggtatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatagaacattaagtataacttaattgtgag 7206  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7207 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 7306  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  7307 ctgatgat 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0433; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 7015 - 7071
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  7015 tgttggaataagccctaatagccaatctatattgattgggtttggctttgcatcatg 7071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 188; Significance: 1e-102; HSPs: 81)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 24695673 - 24695466
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24695673 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 24695574  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||    
T  24695573 accccattaaacataatgaaactattctaaaagtatccgtagtcaagctttattgagaagtgagatatcaataaagcatagagactattatgtaggtaga 24695474  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  24695473 ctgatgat 24695466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 18570070 - 18569863
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18570070 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaattgaacattaagtataacttaattgtgag 18569971  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||| |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  18569970 accccgttaaacataaggaaactactcttaaagtatccgtagtcaagctttattgagaagtggaatatcattaaagcataaagactattatgttggtaga 18569871  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  18569870 ctgatgat 18569863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 221 - 426
Target Start/End: Complemental strand, 19714703 - 19714498
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19714703 aaggcatttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 19714604  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  19714603 cccgttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagact 19714504  T
Q  421 gatgat 426  Q
    ||||||    
T  19714503 gatgat 19714498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 19707419 - 19707218
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||     
T  19707419 catttctttattgattttgttttatttcaaagtaataaagtccctagaatagttagtcagtttaatggaacattaagtataacttaattgtgagaccccg 19707320  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||||||||||| ||||||| ||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  19707319 ttaaacataaggaatctattcttaaaatatccgaagtcaagctttattgagaagtaggatatcattaaagcatagagactattatgtgggtagactgatg 19707220  T
Q  425 at 426  Q
    ||    
T  19707219 at 19707218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23573882 - 23573756
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  23573882 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 23573783  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  23573782 gtcaaagaagttgactccgagatttat 23573756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 20798900 - 20798774
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  20798900 agagttatcatgataagcgcaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgaccggtgttggacgtgctttgaa 20798801  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  20798800 gtcaaagaagttgactccgagatttat 20798774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23516681 - 23516555
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | |||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23516681 agagttatcatgataagcgtagaaaagaccttgagtttcaagaaggagaccacgtgtttttgagagtcactcatgtgactggtgttggacgtgctttgaa 23516582  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  23516581 gtcaaagaagttgactccgagatttat 23516555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 3 - 127
Target Start/End: Original strand, 21984553 - 21984677
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    |||||||||||||||||||||||| |||||||||| ||||| |||||||| || |||||||||||||||||||||| |||||||||||||||||||||||    
T  21984553 agttatcatgataagcgtaggaaagatcttgagtttcaagagggagaccacgtatttttgagagtcactcctgtgattggtgttggacgtgctttgaagt 21984652  T
Q  103 caaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||    
T  21984653 caaagaagttgactccgagatttat 21984677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 23440365 - 23440239
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||| ||||| |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23440365 agagttatcatgataagcgcaggaaagatcttaagtttcaagaaggagaccacgtgtttttgagagtcactcttgtgactggtgttggacgtgctttgaa 23440266  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||| |||||||||||||||||||||    
T  23440265 gtcaatgaagttgactccgagatttat 23440239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 25423329 - 25423203
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  25423329 agagttaccatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcttgtgactggtgttggacgtgcgttgaa 25423230  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || ||||||||||||||||||||||||    
T  25423229 gtgaaagaagttgactccgagatttat 25423203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19770100 - 19769981
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19770100 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 19770001  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  19770000 gtcaaagaagttgaccccga 19769981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27685646 - 27685765
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  27685646 agagttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 27685745  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27685746 gtcaaagaagttgaccccga 27685765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14999985 - 15000104
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  14999985 agagttatcatgataagtgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 15000084  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  15000085 gtcaaagaagttgaccccga 15000104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16356642 - 16356523
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  16356642 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 16356543  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  16356542 gtcaaagaagttgaccccga 16356523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 22333133 - 22333252
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  22333133 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 22333232  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  22333233 gtcaaagaagttgaccccga 22333252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 34566634 - 34566515
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||||    
T  34566634 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgaccggtgtaggacgtgctttgaa 34566535  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  34566534 gtcaaagaagttgaccccga 34566515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 40708920 - 40708801
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  40708920 agagttatcatgataagcgtagaaaagatcttgagttccaagaaggagaccgcgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 40708821  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  40708820 gtcaaagaagttgaccccga 40708801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 224 - 407
Target Start/End: Complemental strand, 27347679 - 27347497
Alignment:
Q  224 gcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccc 323  Q
    |||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||| || |||||||||| |||||||| | ||||||| |||||| |||    
T  27347679 gcatttctttgttgattttgttttgattcaaaataataaagtccttagaataattaatctgtttaatggagcattaagtgtgacttaatcgtgaga-ccc 27347581  T
Q  324 attaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactatt 407  Q
    |||||||  ||||| | |||||| |||||||  ||||||||||||| ||| |||  |||||| |||||||||||||||||||||    
T  27347580 attaaacgaaaggacattattcttaaagtatatgtagtcaagctttattgtgaaaagggataacattaaagcatagagactatt 27347497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37291742 - 37291861
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||| |||||    
T  37291742 agagttatcatgataagtgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgccttgaa 37291841  T
Q  101 gtcaaagaagttgactccga 120  Q
    |||||| |||||||| ||||    
T  37291842 gtcaaaaaagttgaccccga 37291861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 18775917 - 18775791
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || || |||||||| || ||||||||||||||||||||||||||||||||||||||  ||||    
T  18775917 agagttatcatgataagcgcaggaaggatcttgagtttcaggagggagaccacgtctttttgagagtcactcctgtgactggtgttggacgtgccctgaa 18775818  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  18775817 gtcaaagaagttgactccgagatttat 18775791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20468342 - 20468468
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| ||||||||| | ||||| || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  20468342 agagttatcatgataaacgtaggaaagaccttgaatttcaggaaggagaccatgtatttttgagagtcactcctgtgactggtgttggacgtgcattgaa 20468441  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||| ||| |||||    
T  20468442 gtcaaagaagttgactctgaggtttat 20468468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27610494 - 27610375
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27610494 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 27610395  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27610394 gtcaaagaagttgaccccga 27610375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 27668736 - 27668855
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27668736 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 27668835  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27668836 gtcaaagaagttgaccccga 27668855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 41770982 - 41770863
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  41770982 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 41770883  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  41770882 gtcaaagaagttgaccccga 41770863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 225 - 426
Target Start/End: Complemental strand, 22547217 - 22547016
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    ||||| |||||| |||||||||| ||| |||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||| |||||| | ||    
T  22547217 catttatttattcattttgttttattttaaaataataaaaccgctataatagttagtcggtttaatggaacattaagtataacttaatcgtgagatctca 22547118  T
Q  325 ttaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    ||||| ||| ||| | |||| | ||||||| || |||||| |||| ||| |||||| |||| |||||||  |||||||||||||||| | ||||| ||||    
T  22547117 ttaaatatatggacattatttttaaagtattcgcagtcaaactttattgtgaagtgagataacattaaaatatagagactattatgtggatagaccgatg 22547018  T
Q  425 at 426  Q
    ||    
T  22547017 at 22547016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27518547 - 27518428
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||| || || ||||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  27518547 agagttatcatgataagcgtagaaaagatcttgaatttcaggaaggagacctcgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 27518448  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  27518447 gtcaaagaagttgaccccga 27518428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26738951 - 26739077
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | |||||||| |||||| |||| ||| | |||||||| |||||||||||||||||||||||| |||| |||||    
T  26738951 agagttatcatgataagcgtagaaaagaccttgagtttcaagaaagagatcatatatttttgagggtcactcctgtgactggtgttggatgtgcattgaa 26739050  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  26739051 gtcaaagaagttgactccgaggtttat 26739077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 29476319 - 29476433
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| ||||||||||||||||||||| |||| | ||| ||||||||||||||    
T  29476319 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcactcctatgacggatgtaggacgtgctttgaa 29476418  T
Q  101 gtcaaagaagttgac 115  Q
    |||||||||||||||    
T  29476419 gtcaaagaagttgac 29476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 23471369 - 23471254
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||| ||||||||||||||||| || | |||||||| ||||||||||| ||||| ||||||||||||||||  |||||||||||||||||||| |||||    
T  23471369 agagtaatcatgataagcgtaggcaagaccttgagtttcaagaaggagatcatgtatttttgagagtcactcaagtgactggtgttggacgtgcattgaa 23471270  T
Q  101 gtcaaagaagttgact 116  Q
    ||||||||||||||||    
T  23471269 gtcaaagaagttgact 23471254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 219 - 328
Target Start/End: Original strand, 39537962 - 39538071
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| |||||||||| ||||||||||||||||||||||  | |||||| |||||||||| || ||||||||||||||||||||||||||||||||||||    
T  39537962 acaagccatttctttaatgattttgttttgtttcaaaatggttaagtccttagaatagttggttcgtttaatggaacattaagtataacttaattgtgag 39538061  T
Q  319 accccattaa 328  Q
    ||| ||||||    
T  39538062 acctcattaa 39538071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22134808 - 22134689
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||||||||| || ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| |||||||| |||||    
T  22134808 agagttaccatgataagcgcagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgcattgaa 22134709  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  22134708 gtcaaagaagttgaccccga 22134689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 21498282 - 21498408
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||| | |  | ||||| ||||| ||||| |||||  ||||||||||||||| |||||| |||||||||||||  |||||    
T  21498282 agagttaccatgataagcgtaggatagacatcgagtttcaagagggagatcatgtagttttgagagtcactcttgtgaccggtgttggacgtgaattgaa 21498381  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  21498382 gtcaaagaagttgactccgagatttat 21498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 223 - 404
Target Start/End: Complemental strand, 17285935 - 17285754
Alignment:
Q  223 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 322  Q
    ||||||| ||||||||||||||| ||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||| | ||||||| |||| ||||    
T  17285935 ggcatttatttattgattttgttatgtttcaaaataataatctccagagaatagttagtctgtttaatggaacattaagtgtgacttaatcgtgaaaccc 17285836  T
Q  323 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact 404  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| ||| ||| |||||||  ||||||||||| |||||    
T  17285835 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgtgaattgggatagtattaaagcatatagact 17285754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22348563 - 22348446
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||||||||| ||||  |||||||| |  ||||||||||| || |||||||||||||||||| |||||||||| |||||||| |||||    
T  22348563 agagttatcacgataagcgtagaaaat--cttgagtttcgggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgcattgaa 22348466  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  22348465 gtcaaagaagttgaccccga 22348446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21564212 - 21564329
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||||| || ||  | |||||||| ||||||||||||||||||||| |||||||||||| ||||||  ||||| | |||||||||||    
T  21564212 agagttatcatgacaagcgaagaaaggaccttgagtttcaagaaggagaccatgtgtttctgagagtcactcatgtgacacgtgttagtcgtgctttgaa 21564311  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||| ||||||||    
T  21564312 gtctaagaatttgactcc 21564329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 23442539 - 23442656
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||   ||||||||| ||||| ||||| |||||||||||||||||||||||| |||| ||||| |||||||  |||||    
T  23442539 agagttaccatgacaagcgtaggaaggctcttgagtttcaagagggagatcatgtgtttttgagagtcactcctatgacgggtgtaggacgtgtgttgaa 23442638  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |||| |||||||||    
T  23442639 gtctaagatgttgactcc 23442656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 21343666 - 21343730
Alignment:
Q  63 agagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||    
T  21343666 agagtcactcctgtgactggtgttggacgagcattgaagtcaaagaagttgactccgagatttat 21343730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 225 - 328
Target Start/End: Original strand, 31886537 - 31886640
Alignment:
Q  225 catttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagacccca 324  Q
    |||||||||| |||||||||||||||||||| ||||||||||| ||||||| ||||| | |||||| |||||| |||||  ||||||| ||||||| |||    
T  31886537 catttctttagtgattttgttttgtttcaaattaataaagtccttagaataattagttcatttaattgaacatcaagtacgacttaatcgtgagactcca 31886636  T
Q  325 ttaa 328  Q
    ||||    
T  31886637 ttaa 31886640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 285 - 426
Target Start/End: Complemental strand, 18807175 - 18807034
Alignment:
Q  285 tttaatggaacattaagtataacttaattgtgagaccccattaaacataa-ggaaactattctcaaagtatccgtagtcaagctttgttgagaagtggga 383  Q
    |||||||||||||||||| | ||||||| ||||||| |||||||| |||| ||| | |||||| ||||||||  ||||||||| || ||| |||||  ||    
T  18807175 tttaatggaacattaagtgtgacttaatcgtgagacaccattaaa-ataatggacattattcttaaagtatctatagtcaagcgttattgtgaagtaaga 18807077  T
Q  384 tatcattaaagcatagagactattatgtaggtagactgatgat 426  Q
    || || |||||||||||||||||||||  ||||||||||||||    
T  18807076 taacaataaagcatagagactattatgcgggtagactgatgat 18807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 223 - 404
Target Start/End: Complemental strand, 17299088 - 17298907
Alignment:
Q  223 ggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc 322  Q
    ||||||| ||||||||||||||| |||||  |||||||||  |||  ||||||||||||||| |||||||||||||||||   ||||||| |||| ||||    
T  17299088 ggcatttatttattgattttgttatgtttataaataataatatccagagaatagttagtccgattaatggaacattaagtgcgacttaatcgtgaaaccc 17298989  T
Q  323 cattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagact 404  Q
     | |||||  || || | |||||| ||||||| | ||||| | |||| |||  ||||||||||  ||||||||||| |||||    
T  17298988 tagtaaactaaatgacattattcttaaagtattcatagtcgatctttattgttaagtgggatagtattaaagcatatagact 17298907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 39 - 116
Target Start/End: Complemental strand, 20573623 - 20573546
Alignment:
Q  39 caagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgact 116  Q
    ||||||||||| ||||| |||||||||||||||||  ||||||||||||||||||| |||||||||| ||||||||||    
T  20573623 caagaaggagatcatgtatttttgagagtcactccactgactggtgttggacgtgcattgaagtcaaggaagttgact 20573546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 24695765 - 24695709
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24695765 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 24695709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 332 - 424
Target Start/End: Original strand, 39538701 - 39538793
Alignment:
Q  332 taaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagactgatg 424  Q
    |||||| |||||||| ||| ||||| |||| ||||||| ||| |||||||||||||||||||||||  |||||||||||| ||||||||||||    
T  39538701 taaggacactattcttaaaatatccatagttaagctttattgtgaagtgggatatcattaaagcatgaagactattatgtgggtagactgatg 39538793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24735857 - 24735976
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  24735857 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacgggtgtaggccgtgcattaaa 24735956  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  24735957 atctaagaagttgactccga 24735976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24737031 - 24737150
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  24737031 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacgggtgtaggccgtgcattaaa 24737130  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  24737131 atctaagaagttgactccga 24737150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24749800 - 24749919
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  24749800 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacgggtgtaggccgtgcattaaa 24749899  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  24749900 atctaagaagttgactccga 24749919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 11210940 - 11211057
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||| || ||||||| ||||  || || |||||||||||||| || | ||||||||| |||||||| |||||||||||    
T  11210940 agagttatcatgataagaggaggaaagatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggtgttggtcgtgctttgaa 11211039  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  11211040 gtgtaggaagttgactcc 11211057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21891005 - 21891122
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| || ||| |||||||||| ||| |||| |||||    
T  21891005 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttacacctatgactggtgtaggatgtgcgttgaa 21891104  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  21891105 gtctaagaagttgactcc 21891122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19714798 - 19714742
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  19714798 tgttggagtaagccctaatagccaatctatattgattgggtttggctttgtatcatg 19714742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22462074 - 22461957
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| || ||||| |||||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  22462074 agagctatcatgacaagcgtaggaaggaccttgagtttcaggaaggtgaccatgtttttctgagggttactcctatgacgggtgtgggacgtgcattgaa 22461975  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  22461974 gtcgaggaagttgactcc 22461957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 24798643 - 24798760
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| |||||  |||||||||| |  || || || ||||| ||| |||||||||||||| |||| ||||||||||| ||||||||    
T  24798643 agagttaccatgacaagcgaaggaaggatcttgagtttctggagggtgatcatgtttttctgagagtcactcctttgacgggtgttggacgggctttgaa 24798742  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  24798743 gtcgaggaagttgactcc 24798760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28895188 - 28895305
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| | ||||| || || ||||| |||||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  28895188 agagctatcatgacaagcgtaggaaagaccttgaatttcaggaaggtgaccatgtttttctgagagttactcctatgacgggtgtaggacgtgcattgaa 28895287  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  28895288 gtcgagaaagttgactcc 28895305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28924014 - 28924131
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| | ||||| || || ||||| |||||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  28924014 agagctatcatgacaagcgtaggaaagaccttgaatttcaggaaggtgaccatgtttttctgagagttactcctatgacgggtgtaggacgtgcattgaa 28924113  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  28924114 gtcgagaaagttgactcc 28924131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 19707518 - 19707462
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  19707518 tgttggagtaagccctaatagccaatctatattgattgagtttggctttgtatcatg 19707462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 21662300 - 21662412
Alignment:
Q  15 aagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttga 114  Q
    |||||||||||| | ||||| || ||||||| ||| ||||||||| | |||||||||||| |||  |||||||| ||||| ||||| || ||||||||||    
T  21662300 aagcgtaggaaagaccttgaatttcaagaagcagatcatgtgtttctaagagtcactcctatgataggtgttggtcgtgccttgaaatcgaagaagttga 21662399  T
Q  115 ctccgagatttat 127  Q
    || |||| |||||    
T  21662400 cttcgaggtttat 21662412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 21665761 - 21665873
Alignment:
Q  15 aagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttga 114  Q
    |||||||||||| | ||||| || ||||||| ||| ||||||||| | |||||||||||| |||  |||||||| ||||| ||||| || ||||||||||    
T  21665761 aagcgtaggaaagaccttgaatttcaagaagcagatcatgtgtttctaagagtcactcctatgataggtgttggtcgtgccttgaaatcgaagaagttga 21665860  T
Q  115 ctccgagatttat 127  Q
    || |||| |||||    
T  21665861 cttcgaggtttat 21665873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 27347778 - 27347722
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||    
T  27347778 tgttggagtaagccctaatagccaatctatattgattgcgtttggctttgtatcatg 27347722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 28 - 118
Target Start/End: Complemental strand, 25848170 - 25848080
Alignment:
Q  28 atcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||||| || || || || ||||| |||||||||||||||||| |||| |||||||||||||||||||| || |  |||||||||||    
T  25848170 atcttgagtttcaggagggtgatcatgtttttttgagagtcactcctttgacgggtgttggacgtgctttgaaatcgagaaagttgactcc 25848080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14887237 - 14887354
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||    
T  14887237 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaa 14887336  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  14887337 gtcgagaaagttgactcc 14887354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 22502773 - 22502684
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  22502773 tcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaagtcgaggaagttgactcc 22502684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 21339532 - 21339596
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgaga 65  Q
    |||||||||||||||||||||||||| | |||||||| |||||| ||||||| || |||||||||    
T  21339532 agagttatcatgataagcgtaggaaagaccttgagtttcaagaacgagaccaagtatttttgaga 21339596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 118
Target Start/End: Original strand, 37545744 - 37545860
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttt-tgagagtcactcctgtgactggtgttggacgtgctttgaag 101  Q
    ||||| ||||| ||||| || ||  |||||||||| || || || || ||||| |||| |||| ||||||||| |||| |||||||||||||||||||||    
T  37545744 agttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgttttttctgagggtcactcctttgacgggtgttggacgtgctttgaag 37545843  T
Q  102 tcaaagaagttgactcc 118  Q
    || | ||||||||||||    
T  37545844 tcgaggaagttgactcc 37545860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 127 - 182
Target Start/End: Original strand, 39537870 - 39537925
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcat 182  Q
    ||||||| |||||||||||||||||||||| |||| || |||||||||||||||||    
T  39537870 tgttggattaagccctaatagccaatctatgttgactgagtttagctttgtatcat 39537925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 245 - 335
Target Start/End: Complemental strand, 33477479 - 33477389
Alignment:
Q  245 tttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccccattaaacataag 335  Q
    ||||||||||||||||||||||| || ||||||||| | | |||||||| |||||||| | |  |||| |||||||| |||||| ||||||    
T  33477479 tttgtttcaaaataataaagtccttacaatagttaggctgattaatggatcattaagtgtgatctaatcgtgagacctcattaatcataag 33477389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20342404 - 20342287
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || ||  | || ||||| ||| |||||||||| ||| |||| ||||||||||||||||||||    
T  20342404 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagcgtgatcatgtttttctgagagtcacccctttgacaggtgttggacgtgctttgaa 20342305  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  20342304 gtcgagaaagttgactcc 20342287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22236166 - 22236283
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  22236166 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggacgtgcattgaa 22236265  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  22236266 gtcgaggaagttgactcc 22236283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27011206 - 27011089
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| ||||  || || |||||||||||||| || | || |||||| || ||||| |||||||||||    
T  27011206 agagttatcatgataagaggaggaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcatgtgaccggagttggtcgtgctttgaa 27011107  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  27011106 gtgtaggaagttgactcc 27011089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 119
Target Start/End: Complemental strand, 21404934 - 21404858
Alignment:
Q  43 aaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccg 119  Q
    ||||||| ||||||||||| |||||||||| |||||| ||||||||||||||  | || ||||||||  ||||||||    
T  21404934 aaggagatcatgtgttttttagagtcactcttgtgaccggtgttggacgtgcgctaaaatcaaagaaactgactccg 21404858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 16065936 - 16066034
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttga 99  Q
    ||||||||||||||||| | |||||  || |||| |||||||  || || ||||| ||||| ||||| | ||| |||||||||||||| ||||||||||    
T  16065936 agagttatcatgataagaggaggaaggatattgaattccaagttggtgatcatgtattttttagagttaatcccgtgactggtgttgggcgtgctttga 16066034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 20821567 - 20821458
Alignment:
Q  9 catgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaaga 108  Q
    ||||| ||||||| |||| | ||||| || || ||||| || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||||| | ||    
T  20821567 catgacaagcgtaagaaagaccttgaatttcaggaaggtgatcatgtttttctgagggttactcctatgacgggtgtaggacgtgcattgaagtcgagga 20821468  T
Q  109 agttgactcc 118  Q
    ||||||||||    
T  20821467 agttgactcc 20821458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 21937434 - 21937551
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || ||||||||||| || || | ||||||||| || ||||| |||||||||||    
T  21937434 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttaagggtgaatcctgtgaccggagttggtcgtgctttgaa 21937533  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  21937534 gtgtaggaagttgactcc 21937551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 18570156 - 18570108
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||| |||||||| |||||||||| ||||||||| |||||||||||||    
T  18570156 taagctctaatagctaatctatattaattgggtttggctttgtatcatg 18570108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 23080385 - 23080452
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||| |||| ||||||||| |||| |||||  ||||||| |||||||| ||||||||||||||    
T  23080385 catgtttttctgagggtcactcctatgacgggtgtaagacgtgcattgaagtcgaagaagttgactcc 23080452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 17269608 - 17269698
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| || || ||||| ||| | ||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  17269608 cttgagtttcaagagggtgatcatgtatttctaagagttactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 17269698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 337
Target Start/End: Original strand, 11479420 - 11479489
Alignment:
Q  269 tagaatagttagtccgtttaatggaacattaagtataacttaattgtgagaccc-cattaaacataagga 337  Q
    ||||||| |||||  |||||||| || ||||||| | |||| |||||||||||| |||||||||||||||    
T  11479420 tagaataattagtgtgtttaatgaaatattaagtgtgacttgattgtgagaccctcattaaacataagga 11479489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20773882 - 20773765
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||| ||||| | ||| |||| || ||||| | |||||| ||| |||| || |||||| |||| || || |||||||| |||||    
T  20773882 agagctatcatgacaagcgtcggaaagagcttcagtttcaggaagggggccatgtttttctgagggttactcctatgacgggcgtaggacgtgcattgaa 20773783  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  20773782 gtcgagaaagttgactcc 20773765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 22381293 - 22381204
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||  |||| ||||| |||||||| |||||||| | ||||||||||||    
T  22381293 tcttgagtttcaggagggtgatcatgtttttctgagggtcactccgatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 22381204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24581333 - 24581216
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| ||||  || || || |||||| | || || | ||||||||| || ||||| |||||||||||    
T  24581333 agagttatcatgataagaggaggaaggatattgagtttcaagttggtgatcacgtgtttgtaagggtgaatcctgtgaccggagttggtcgtgctttgaa 24581234  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  24581233 gtgtaggaagttgactcc 24581216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25244598 - 25244695
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttg 98  Q
    ||||||||||| ||||| | | |||| || ||||||| ||||  ||||| ||||||||||||||||| | || |||    ||||||||||||||||||    
T  25244598 agagttatcatcataagaggatgaaagatattgagtttcaagttggagatcatgtgtttttgagagtgaatcatgtagtcggtgttggacgtgctttg 25244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25308750 - 25308847
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttg 98  Q
    ||||||||||| ||||| | | |||| || ||||||| ||||  ||||| ||||||||||||||||| | || |||    ||||||||||||||||||    
T  25308750 agagttatcatcataagaggatgaaagatattgagtttcaagttggagatcatgtgtttttgagagtgaatcatgtagtcggtgttggacgtgctttg 25308847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 135 - 183
Target Start/End: Complemental strand, 17285996 - 17285948
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||| |||||||||| ||||| |||| |||| |||||||    
T  17285996 taagccctaatagctaatctatatttattggatttaactttttatcatg 17285948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 184; Significance: 2e-99; HSPs: 2)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 219 - 426
Target Start/End: Original strand, 993 - 1200
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  993 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctaaaatagttagtccgtttaatgaaacattaagtataacttaattgtgag 1092  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  1093 accccattaaacataaagaaactattctcaaagtatctgtagtcaagctttattgagaagtgggatatcattaaagcatagagactattatgtaggtaga 1192  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  1193 ctgatgat 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 900 - 957
Alignment:
Q  126 atgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  900 atgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 180; Significance: 5e-97; HSPs: 2)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 180; E-Value: 5e-97
Query Start/End: Original strand, 219 - 426
Target Start/End: Complemental strand, 26197 - 25990
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgag 318  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  26197 acaagacatttctttattgattttgttttgtttcaaaataataaagtccttagaatagttagtccatttaatggaacattaaatataacttaattgtgag 26098  T
Q  319 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtaga 418  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||    
T  26097 accccattaaacataaggaaactattctcaaagtatccgtagtcaagctttattgaaaagtgggatatcattaaagcatagcgactattatgtaggtaga 25998  T
Q  419 ctgatgat 426  Q
    ||||||||    
T  25997 ctgatgat 25990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 127 - 182
Target Start/End: Complemental strand, 26286 - 26231
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcat 182  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  26286 tgttggaataagccctaatagtcaatctatattgattgggtttggctttgtatcat 26231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 166; Significance: 1e-88; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 221 - 426
Target Start/End: Original strand, 5531 - 5736
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5531 aaggcatttctttattgatttatttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 5630  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagagactattatgtaggtagact 420  Q
    ||| ||||||||||||||| |||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  5631 cccgttaaacataaggaaattattcttaaagtatatgtagtcaagctttattgagaagtgggatatcattaaagcataaagactattatgtgggtagact 5730  T
Q  421 gatgat 426  Q
    ||||||    
T  5731 gatgat 5736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 5444 - 5492
Alignment:
Q  135 taagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||    
T  5444 taagccctaatagccaatctatattgtttgggtttggctttgtatcatg 5492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 138; Significance: 5e-72; HSPs: 3)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 221 - 402
Target Start/End: Complemental strand, 230545 - 230365
Alignment:
Q  221 aaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtccgtttaatggaacattaagtataacttaattgtgagac 320  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  230545 aaggcatttctttattgattttgttttgtttcaaaataataaagttcttataatagttagtccgtttaatggaacattaagtataacttaattgtgagac 230446  T
Q  321 cccattaaacataaggaaactattctcaaagtatccgtagtcaagctttgttgagaagtgggatatcattaaagcatagaga 402  Q
    ||| |||||||||||||||| ||||| |||||||  ||||||||| ||| ||||||||||||||||||||||||||||||||    
T  230445 ccc-ttaaacataaggaaaccattcttaaagtatttgtagtcaagatttattgagaagtgggatatcattaaagcatagaga 230365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 230640 - 230584
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||| |||||  |||||||||||||||||||||||||||| |||||||||||||    
T  230640 tgttggagtaagcaataatagccaatctatattgattgggtttggctttgtatcatg 230584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 24119 - 24002
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| || |  || || ||||||||||| ||||| | ||| |||||||||||||| |||||||||||    
T  24119 agagttatcatgataagaggagaaaggatattgagtttcaggttggtgatcatgtgttttttagagttaatccggtgactggtgttggtcgtgctttgaa 24020  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  24019 gtgtaggaagttgactcc 24002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 107; Significance: 2e-53; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 65644 - 65518
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  65644 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggcgttggacgtgccttgaa 65545  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  65544 gtcaaagaagttgactccgagatttat 65518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 39924 - 39982
Alignment:
Q  69 actcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  39924 actcctgtgactggtgttggacgtgccttgaagtcaaagaatttgactccgagatttat 39982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1355 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold1355
Description:

Target: scaffold1355; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 915 - 789
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||| ||| ||| |||||||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  915 agagttatcatgataagcatagaaaagatcttgagtttcaagaaggagaccacgtatttttgagagtcactcctgtgactggtgttggacgtgctttgaa 816  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  815 gtcaaagaagttgactccgagatttat 789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 127266 - 127392
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  127266 agagttatcatgataagcgtaggaaagaccttgagttccaagaaggagatcacgtgtttttgagagtcactcatgtgactggtgttggacgtgcattgaa 127365  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  127366 gtcaaagaagttgactccgagatttat 127392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6611 - 6485
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||| ||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  6611 agagttaccatgataaacgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcatgtgactggtgttggacgtgctttgaa 6512  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  6511 gtcaaagaagttgactccgagatttat 6485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0284 (Bit Score: 99; Significance: 1e-48; HSPs: 1)
Name: scaffold0284
Description:

Target: scaffold0284; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 22106 - 21980
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |||||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  22106 agagttatcatgataagtgcaggaaggatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgcgactggtgttggacgtgctttgaa 22007  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  22006 gtcaaagaagttgactccgagatttat 21980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14278 - 14152
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||    
T  14278 agagttatcatgataagcgtaggagagatcttgagtttcaagaaggagaccacatgtttttgatagtcactcctgtgactggtgttggacgtgctttgaa 14179  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||| |||||||||||||||||||    
T  14178 gtcaaagtagttgactccgagatttat 14152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 31647 - 31532
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||| |||||||||||    |||||||| ||||| ||| | ||||||||| ||||||| ||| || |||| ||||| |||||||| |||||||    
T  31647 agttaccatgacaagcgtaggaaggcccttgagtttcaagagggatatcatgtgtttctgagagttacttctatgacgggtgtaggacgtgcattgaagt 31548  T
Q  103 caaagaagttgactcc 118  Q
    | ||||||||||||||    
T  31547 ctaagaagttgactcc 31532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 99; Significance: 1e-48; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 278897 - 279023
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||||  ||||||||    
T  278897 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctgtgactggtgtgggacaagctttgaa 278996  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  278997 gtcaaagaagttgactccgagatttat 279023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 164776 - 164902
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| ||||||||||| || || |||||||||||||||| ||||||||||||||||||||| |||||    
T  164776 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagatcacgtatttttgagagtcactcatgtgactggtgttggacgtgcattgaa 164875  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||| |||| |||||    
T  164876 gtcaaagaagttgacttcgaggtttat 164902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 308898 - 308787
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  308898 agagttatcatgataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 308799  T
Q  101 gtcaaagaagtt 112  Q
    ||||||||||||    
T  308798 gtcaaagaagtt 308787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 260518 - 260428
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| || || || || ||||| ||||||||||| |||||  |||| ||||| ||||||||||| || || | ||||||||||||||    
T  260518 cttgagtttcaggagggtgatcatgtatttttgagagttactccgatgacgggtgtaggacgtgctttaaaatcgaggaagttgactccga 260428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 96; Significance: 6e-47; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 64102 - 64213
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  64102 ttatcatgataagcgtaggaaagatcttgagttccaagaaggagaccacgtgtttttgagagtcactcctgtggctggagttggacgtgctttgaagtca 64201  T
Q  105 aagaagttgact 116  Q
    ||||||||||||    
T  64202 aagaagttgact 64213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4472 - 4598
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| |||||    
T  4472 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgttattgaaagtcactcttgtgactggtgttggacgtgccttgaa 4571  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||| ||||||||||||||    
T  4572 gtcaaagaagttaactccgagatttat 4598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0379 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 13044 - 13170
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  13044 agagttatcatgataagcgtaggaaagatcttgaatttcaagaaggagaccatgtgttattgagagtcactcctgtgactggtgttggacgtgcattgaa 13143  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||| ||||| |||||| ||||||||||    
T  13144 gtctaagaaattgacttcgagatttat 13170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 761 - 886
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||| |||| |||||||||||||| ||||||| ||||||| ||| |||||||||||||||||||||||||||    
T  761 agagttatcatgataagcgtaggaaagatcttaagtttcaagaaggagaccacgtgtttt-gagagtccctcgtgtgactggtgttggacgtgctttgaa 859  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  860 gtcaaagaagttgactccgagatttat 886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 95; Significance: 2e-46; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6262 - 6136
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| |||||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||| ||||||||    
T  6262 agagttaccatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtatttttgagagtcacacctgtgactggtgttggacgagctttgaa 6163  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||    
T  6162 gtcaaagaagttgactccaagatttat 6136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 22933 - 22816
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || ||||||||||||||||| | || |||||| ||||||||  ||||||||||    
T  22933 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagagtgaatcatgtgaccggtgttggttgtgctttgaa 22834  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  22833 gtgtaggaagttgactcc 22816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1591 - 1708
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||| |||||||    |||||||| || |  | ||| ||||| |||  |||||| |||||| |||| ||||| |||||||| |||||    
T  1591 agagttatcatgacaagtgtaggaaggcccttgagtttcaggtggaagatcatgtatttcggagagttactcctatgacgggtgtaggacgtgcattgaa 1690  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  1691 gtcgaagaagttgactcc 1708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8835 - 8709
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| |||||    
T  8835 agagttatcatgataagcgtaggaaagatcttgagtttcaagaaggagaccacgtgttattgaaagtcactcttgtgactggtgttggacgtgccttgaa 8736  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||| ||||||||||||||    
T  8735 gtcaaagaagttaactccgagatttat 8709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 33640 - 33766
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||||||| ||||| |||| |||||||| ||||||||||||||||||||| |||||    
T  33640 agagttatcatgataagcgtaggaaagatcttgagtttcaggaaggagaccacgtgttattgaaagtcactcatgtgactggtgttggacgtgccttgaa 33739  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  33740 gtcaaagaagttgactccgagatttat 33766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 8029 - 7903
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| |||||||||| || ||||||||||| |||||||||||||||||| | ||||| |||||||||||||| |||||    
T  8029 agagttatcatgataagcgtaggaaagatcttgagtttcaggaaggagaccacgtgtttttgagagtcacttcggtgaccggtgttggacgtgccttgaa 7930  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  7929 gtcaaagaagttgactccgagatttat 7903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 95; Significance: 2e-46; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 14599 - 14473
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||| |||||  |||||||||| || |||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  14599 agagttatcatgataagcgcaggaaggatcttgagtttcaggaaggataccacgtgtttttgagagtcactcctgtgactggtgttggacgtgccttgaa 14500  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  14499 gtcaaagaagttgactccgagatttat 14473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 859 - 740
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||  |||||||||| ||| |||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  859 agagttatcaccataagcgtagaaaagatcttgagtttcaagaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 760  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  759 gtcaaagaagttgaccccga 740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9209 - 9083
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| | |||||||| |||||||| || ||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  9209 agagttaccatgataagcgtaggaaagaccttgagtttcaagaaggggatcatgtatttttgagagtcactcctgtgaccggtgttggacgtgcgttgaa 9110  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  9109 gtcaaagaagttgactccgagatttat 9083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 400 - 517
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  || ||||||| || |  || || |||||||| |||||||| | |||||| ||| ||||||| |||||||||||    
T  400 agagttatcatgataagaggaggaaggatattgagtttcaggttggtgatcatgtgttcttgagagtgaatcctgtaactagtgttggtcgtgctttgaa 499  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  500 gtgtaggaagttgactcc 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 9582 - 9456
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||| || || |||||||||||||||||||||||||||||||| ||||||||    
T  9582 agagttatcatgataagcgtaggaaagaccttgagtttcaagaaggagaccacgtattgttgagagtcactcctgtgactggtgttggacgagctttgaa 9483  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||| ||||||| ||||||||    
T  9482 gtcaaagaaggtgactcctagatttat 9456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 91; Significance: 6e-44; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1244 - 1118
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | ||||||||| |||||||||| ||||| || ||||||||||| ||||||||||||||||||||||| |||||    
T  1244 agagttatcatgataagcgtagaaaagaccttgagttcaaagaaggagatcatgtattcttgagagtcacccctgtgactggtgttggacgtgcattgaa 1145  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  1144 gtcaaagaagttgactccgagatttat 1118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 91; Significance: 6e-44; HSPs: 3)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 219484 - 219610
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| ||||||| ||| || || |||||||||||||||||||||||||||||||||||||| |||||    
T  219484 agagttatcatgataagcgtaggaaagaccttgagtttcaagaagaagatcacgtatttttgagagtcactcctgtgactggtgttggacgtgcgttgaa 219583  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  219584 gtcaaagaagttgactccgaggtttat 219610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 229282 - 229158
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||| ||||| ||| | ||||| || ||||||||||| ||||| |||||||||||||||||| | |||||||| |||||||| |||||    
T  229282 agagttaccatgataaacgtagaaaagaccttgaatttcaagaaggagatcatgtatttttgagagtcactcctattactggtgtgggacgtgcattgaa 229183  T
Q  101 gtcaaagaagttgactccgagattt 125  Q
    |||||||||||||||||||||||||    
T  229182 gtcaaagaagttgactccgagattt 229158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 33062 - 33179
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || |  |||||||| |||||||| |||||||||||    
T  33062 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaaacctgtgaccggtgttggtcgtgctttgaa 33161  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  ||||||||||||||    
T  33162 gtgtaagaagttgactcc 33179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 89; Significance: 9e-43; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 3 - 127
Target Start/End: Complemental strand, 1376 - 1252
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||||||| |||||||| |||||||||| |||||||||||||| || ||||| |||||||||||||||||||||||| ||||||| |||||||    
T  1376 agttaccatgataagtgtaggaaagatcttgagtttcaagaaggagaccacgtattttttagagtcactcctgtgactggtgttcgacgtgccttgaagt 1277  T
Q  103 caaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||    
T  1276 caaagaagttgactccgagatttat 1252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 53 - 175
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||||||||||||||||||| | |||||||| ||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||| |||||||||    
T  53 ttatcatgataagcgtaggaaagaccttgagtttcaagaaggagatcatgtattttttagagtcactcatgtgactggtgttggacgtgcattgaagtca 152  T
Q  105 aagaagttgactccgagatttat 127  Q
    ||||||||||||| |||||||||    
T  153 aagaagttgactctgagatttat 175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6253 - 6127
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||| ||||||| ||| |  |||||||||| ||||| |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  6253 agagttatcataataagcgcaggcaggatcttgagtttcaagagggagaccacgtgtttttaagagtcactcctgtgactggtgtttgacgtgctttgaa 6154  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  6153 gtcaaagaagttgactccgagatttat 6127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 87; Significance: 1e-41; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 15731 - 15605
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||||| || ||||| |||||||||||||| || ||||||| ||||| || |||||||||||||||||||||||||||    
T  15731 agagttaccatgataagcgtaggaaatacctcgagtttcaagaaggagaccacgtatttttgacagtcattcttgtgactggtgttggacgtgctttgaa 15632  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||    
T  15631 gtcaaagaagttgactcctagatttat 15605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 15894 - 15832
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttga 63  Q
    ||||||| |||||||||||||||||||| || ||||| |||||||||||||| || |||||||    
T  15894 agagttaccatgataagcgtaggaaatacctcgagtttcaagaaggagaccacgtatttttga 15832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3379 - 3253
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | ||| |||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  3379 agagttatcatgataagcgtaggaaagaccttaagtttcaagaaggagatcatgtatttttgagagtcactcctgtgactggtgttggacgcgcattgaa 3280  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||| |||| |||||    
T  3279 gtcaaagaagttgacttcgaggtttat 3253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 180456 - 180330
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||  |||||||||| ||||| || || ||||||||||||||||| ||||| |||||||||||||||| |||||||||    
T  180456 agagttatcatgataagcgtagaaaggatcttgagtttcaagagggtgatcatgtgtttttgagagttactccggtgactggtgttggacctgctttgaa 180357  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||||||||||||    
T  180356 gtcaaagaagttgactccgagatttat 180330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 84; Significance: 9e-40; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 109878 - 109997
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||    
T  109878 agagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaa 109977  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  109978 gtcaaagaagttgaccccga 109997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 112798 - 112681
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  |||||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  112798 agagctatcatgacaagcgtaggaaggatcttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgcattaaa 112699  T
Q  101 gtcaaagaagttgactcc 118  Q
     || ||||||||||||||    
T  112698 atctaagaagttgactcc 112681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 96069 - 96186
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| | ||||| || || ||||| |||||||| |||||||| || |||||| |||| ||||| |||||||| |||||    
T  96069 agagctatcatgacaagcgtaggaaagaccttgaatttcaggaaggtgaccatgtttttttgagggttactcctatgacgggtgtaggacgtgcattgaa 96168  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  96169 gtcgagaaagttgactcc 96186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0396 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 4271 - 4145
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||  ||||||||||||||||| | ||||||||  |||||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  4271 agagttactatgataagcgtaggaaagaccttgagttttaagaaggagatcatgtatttttgagagtcactcctgtgactggtgttggacgcgcattgaa 4172  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  4171 gtcaaagaagttgactccgaggtttat 4145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 17226 - 17100
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| ||||||||||| || || |||||||||||||||| ||||| | ||||||||||||| |||||    
T  17226 agagttatcatgataagcgtaggaaagaccttgagtttcaagaaggagatcacgtatttttgagagtcactcatgtgatttgtgttggacgtgcattgaa 17127  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  17126 gtcaaagaagttgactccgaggtttat 17100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 32819 - 32945
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| ||||||||||  |||||||||| || || |||||||||||||||| ||||||||||||||||| ||| |||||    
T  32819 agagttatcatgataagcgtaggaaagatcttgagttttaagaaggagatcacgtatttttgagagtcactcttgtgactggtgttggacttgcattgaa 32918  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || ||||||||||||| ||||||||||    
T  32919 gttaaagaagttgacttcgagatttat 32945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 83; Significance: 4e-39; HSPs: 5)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 112260 - 112134
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||||||| |||  | |||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  112260 agagatatcatgataagcgtaagaaggaccttgagtttcaggaaggagaccatgtatttttgagagtcactcctgtgactggtgttggacgtgcattgaa 112161  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| || |||||    
T  112160 gtcaaagaagttgactcccaggtttat 112134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 203539 - 203661
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||| |||||||| |||||| | ||||| || ||||||||||||||||||||| | |||||||||| |||||| |||| ||| |||||||||||| ||    
T  203539 ttatcacgataagcgcaggaaagaccttgaatttcaagaaggagaccatgtgtttctaagagtcactcttgtgacaggtgctggccgtgctttgaagcca 203638  T
Q  105 aagaagttgactccgagatttat 127  Q
    ||||||||||| ||||| |||||    
T  203639 aagaagttgacgccgaggtttat 203661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 322943 - 322826
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  322943 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 322844  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  322843 gtcgaggaagttgactcc 322826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 117807 - 117690
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| |||| || |||||| ||||  |||| |||||||| |||||    
T  117807 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgagtgtgggacgtgcattgaa 117708  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  117707 gtcgaggaagttgactcc 117690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 386029 - 385939
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| ||||| ||| | ||| ||||||||||||||  ||| ||||| ||  |||| |||||||  ||||||||||||||||    
T  386029 cttgagtttcaagagggagatcatctatttctgagagtcactcctacgacgggtgtaggttgtgcgttgaagtataagaagttgactccga 385939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 7635 - 7522
Alignment:
Q  2 gagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaag 101  Q
    ||||||||||||||||||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| |||||||||||||||    
T  7635 gagttatcatgataagcgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaag 7536  T
Q  102 tcaaagaagttgac 115  Q
    ||||||||||||||    
T  7535 tcaaagaagttgac 7522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 15146 - 15262
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| || |||||||| ||||| | |||||||||||||| ||||||||||||||||||||| |||||    
T  15146 agagttatcatgataagcgtaggaaagaccttgagtttcaggaaggagatcatgtatctttgagagtcactcatgtgactggtgttggacgtgcattgaa 15245  T
Q  101 gtcaaagaagttgactc 117  Q
    |||||||||||||||||    
T  15246 gtcaaagaagttgactc 15262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 653 - 534
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| | ||||| || || ||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  653 agagttatcatgataagcgtagaaaagaccttgaatttcaggaaggagaccacgtgtttttgagagtcactcctatgactggtgtaggacgtgctttgaa 554  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  553 gtcaaagaagttgaccccga 534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 9 - 127
Target Start/End: Original strand, 335 - 453
Alignment:
Q  9 catgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaaga 108  Q
    |||||||||||||||||| |  ||||||| |||||||| |||||||||||||||||||||| |||||| || |||||||||||||| |||||||| ||||    
T  335 catgataagcgtaggaaagacattgagtttcaagaaggggaccatgtgtttttgagagtcaatcctgtaaccggtgttggacgtgcattgaagtctaaga 434  T
Q  109 agttgactccgagatttat 127  Q
    |||||||||||||||||||    
T  435 agttgactccgagatttat 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 1147 - 1021
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||| | |||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  1147 agagttatcatgataagcgtaggaaagaccttgagtttcaggaaggagaccatgtattttttagagtcactcctgtgactggtgttggacgtgcattgaa 1048  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     | |||||| |||| |||||| |||||    
T  1047 atgaaagaaattgaatccgaggtttat 1021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 5460 - 5334
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||| ||| || |||||| ||||||||||  |||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||    
T  5460 agagttatcatggtaaacgcaggaaagatcttgagtttaaagaaggagaccacatatttttgagagtcactcctgtgactggtgttggacgagctttgaa 5361  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||| ||||| |||||||||||||||    
T  5360 gtcaaggaagtcgactccgagatttat 5334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 79; Significance: 9e-37; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 49728 - 49606
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||||  | ||||| |||||||||||||||| || ||||||||| ||||||||||||    
T  49728 ttatcatgataagcgtaggaaagaccttgagtttcaagaaggagaccacatattttttagagtcactcctgtgattgttgttggacgagctttgaagtca 49629  T
Q  105 aagaagttgactccgagatttat 127  Q
    |||||||||||||| ||||||||    
T  49628 aagaagttgactcctagatttat 49606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 79; Significance: 9e-37; HSPs: 5)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 26600 - 26726
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| | ||||||||||| |||||||| || || ||||||||||| ||||||||||||||||||||||| || |||||    
T  26600 agagttaccatgataagcgtaggaaagaccttgagttccaggaaggagatcacgtatttttgagagttactcctgtgactggtgttggacgcgcattgaa 26699  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || |||||||||||||||||| |||||    
T  26700 gtgaaagaagttgactccgaggtttat 26726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 122017 - 122134
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || ||||| |||||||| || | ||||||||| |||||||| |||||||||||    
T  122017 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtatttttgagggtgaatcctgtgaccggtgttggtcgtgctttgaa 122116  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  122117 gtgtaggaagttgactcc 122134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 118
Target Start/End: Complemental strand, 148776 - 148692
Alignment:
Q  34 agttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| |||| || || ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  148776 agttctaagagggtgatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaagtcgaagaagttgactcc 148692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 195770 - 195886
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  195770 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgt-tttctgagggttactcctatgacgggtgtaggacgtgcattgaa 195868  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  195869 gtctaggaagttgactcc 195886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 118
Target Start/End: Original strand, 68575 - 68624
Alignment:
Q  69 actcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  68575 actcctatgacgggtgtaggacgtgcattgaagtctaagaagttgactcc 68624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 78; Significance: 3e-36; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 15115 - 14990
Alignment:
Q  2 gagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaag 101  Q
    ||||||||||||||||| ||||||| | |||||||| || |||||||| ||||| ||||||| ||||||||||||||||||||||||||| || ||||||    
T  15115 gagttatcatgataagcttaggaaagaccttgagtttcatgaaggagatcatgtatttttgatagtcactcctgtgactggtgttggacgcgcattgaag 15016  T
Q  102 tcaaagaagttgactccgagatttat 127  Q
    ||||| |||||||||||||| |||||    
T  15015 tcaaataagttgactccgaggtttat 14990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7178 - 7058
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgttttt-gagagtcactcctgtgactggtgttggacgtgctttga 99  Q
    |||||||||| ||||||||| | ||| |||||||||| |||||||||||||| |||||||| ||||||||||||| |||||||||| |||||||||||||    
T  7178 agagttatcacgataagcgtggaaaagatcttgagtttcaagaaggagaccacgtgttttttgagagtcactcctatgactggtgtaggacgtgctttga 7079  T
Q  100 agtcaaagaagttgactccga 120  Q
    |||||||||||||||| ||||    
T  7078 agtcaaagaagttgaccccga 7058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7616 - 7497
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||| ||||| ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||    
T  7616 agagttatcacgataaacgtagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgctttgaa 7517  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  7516 gtcaaagaagttgaccccga 7497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 241 - 115
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| ||||| ||  |||||||||| ||||| ||  | ||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  241 agagttatcatgataaccgtagaaaggatcttgagtttcaagagggttatcatgtgtttttgagagtcaatccggtgactggtgttggacgtgctttgaa 142  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    || ||| ||||||||||||||||||||    
T  141 gtaaaaaaagttgactccgagatttat 115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 28206 - 28080
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||  ||||||| || ||||| || || ||||||||||||||||| ||||| ||||||||||||||||||||| ||||    
T  28206 agagttatcatgataagcgtagaaaggatcttgaatttcaagagggtgatcatgtgtttttgagagttactccggtgactggtgttggacgtgctgtgaa 28107  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||| ||| ||||||||    
T  28106 gtcaaagaagttgaatcctagatttat 28080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 116972 - 117098
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| ||||||||| | |||||||| |||||| |||| || || |||||||||||||||| ||||| | ||||||||||||| |||||    
T  116972 agagttatcatgataaacgtaggaaagaccttgagtttcaagaaagagaacaagtatttttgagagtcactcatgtgaatagtgttggacgtgcattgaa 117071  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  117072 gtcaaagaagttgactccgaggtttat 117098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 23583 - 23650
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||||||||| || | ||||||||| |||||||| |||||||||||||  | ||||||||||||    
T  23583 catgtgtttttgagggtgaatcctgtgaccggtgttggtcgtgctttgaagtgtaggaagttgactcc 23650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 75; Significance: 2e-34; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 162352 - 162226
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||  ||| |||||| ||| ||||||| |||||| || |||||||||||||||||| |||||||||||||||| || | |||    
T  162352 agagttatcatgataagcgtaaaaaagatcttgtgtttcaagaagtagaccacgtatttttgagagtcactcctatgactggtgttggacgagcgtcgaa 162253  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||| |||||||||||||||||    
T  162252 gtcaaagaacttgactccgagatttat 162226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 448298 - 448172
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| ||||||||||||||||||||| | |||||||| ||||||||||| || || ||||| |||||||||||||| |||  ||||||||| || |||||    
T  448298 agagctatcatgataagcgtaggaaagaccttgagtttcaagaaggagatcacgtattttttagagtcactcctgtaactattgttggacgagcattgaa 448199  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||||| |||||    
T  448198 gtcaaagaagttgactccgaggtttat 448172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 90999 - 91114
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| ||||||  ||| ||||| |||||||| |||||    
T  90999 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttactcctacgacgggtgtaggacgtgcattgaa 91098  T
Q  101 gtcaaagaagttgact 116  Q
    ||| ||||||||||||    
T  91099 gtctaagaagttgact 91114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 78696 - 78813
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || ||||||||||||||||| | || |||||| || ||||| |||||||||||    
T  78696 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagagtgaatcatgtgacaggagttggtcgtgctttgaa 78795  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  78796 gtgtaggaagttgactcc 78813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 16532 - 16657
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| |||||||||||||||||| | |||||||| ||||| ||||| || || |||||||||||||||||||||||||||||||||||  | |||||    
T  16532 agagttaccatgataagcgtaggaaagaccttgagtttcaagagggagatcacgtatttttgagagtcactcctgtgactggtgttggacgcacattgaa 16631  T
Q  101 gtcaaagaagttgactccgagattta 126  Q
    ||||||||||||||||| ||| ||||    
T  16632 gtcaaagaagttgactcagaggttta 16657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 74; Significance: 8e-34; HSPs: 2)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28836 - 28953
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||  | |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||  | |||||||||||    
T  28836 agagttatcatgacaagcgtagaaaggaccttgagtttcaagaaggagaccatgtgtttttgagagtcactcatgtgacaggtgtctgtcgtgctttgaa 28935  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||||||||||||||||||    
T  28936 gtcaaagaagttgactcc 28953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 40827 - 40944
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||  | |||||||| |||||||||||||||||||||||||||||||||| |||||| |||||  | |||||||||||    
T  40827 agagttatcatgacaagcgtagaaaggaccttgagtttcaagaaggagaccatgtgtttttgagagtcactcatgtgacaggtgtctgtcgtgctttgaa 40926  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||||||||||||||||||    
T  40927 gtcaaagaagttgactcc 40944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 71; Significance: 5e-32; HSPs: 2)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 58473 - 58599
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||| ||||| |||||| |||||||||| |||  ||||    
T  58473 agagttatcatgataagcataggaaggatcttgagtttcaagaaggagaccatgtgtttttgagagccactcatgtgaccggtgttggacatgcactgaa 58572  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||  |||||||||| |||||    
T  58573 atcaaagaaactgactccgaggtttat 58599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 74139 - 74038
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||| | |||||| || ||||||| || |  |  || ||||||||| ||||||| | |||||| || ||||||||||||||||||||    
T  74139 agagctatcatgataagagcaggaaagatattgagtttcaggttgatgatcatgtgtttctgagagtgaatcctgtaaccggtgttggacgtgctttgaa 74040  T
Q  101 gt 102  Q
    ||    
T  74039 gt 74038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 847 - 966
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||| ||| ||||||||||  | ||||||||||| || ||||| |||||||||||| |||||||||| ||||||||  ||||    
T  847 agagttatcatgataagcgtagaaaagatcttgagtttaaggaaggagaccacgtattttttagagtcactcctatgactggtgtaggacgtgcactgaa 946  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  947 gtcaaagaagttgaccccga 966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 68; Significance: 3e-30; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8724 - 8605
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||| ||||| ||||| ||| ||||||||||  | ||||||||||| || |||||||||||||||||| |||||||||| |||||||| |||||    
T  8724 agagttatcacgataaacgtagaaaagatcttgagttttaggaaggagaccacgtatttttgagagtcactcctatgactggtgtaggacgtgccttgaa 8625  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  8624 gtcaaagaagttgaccccga 8605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 43393 - 43274
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||||||| | || ||| |||||||||| || ||||||||||| || |||||||||||||||||| |||||||||| || |||||||||||    
T  43393 agagttaccatgataagtgcagaaaagatcttgagtttcaggaaggagaccacgtatttttgagagtcactcctatgactggtgtagggcgtgctttgaa 43294  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||||||||||||||| ||||    
T  43293 gtcaaagaagttgaccccga 43274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 50595 - 50698
Alignment:
Q  15 aagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttga 114  Q
    |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || || || ||||||||||    
T  50595 aagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgcattaaaatctaagaagttga 50694  T
Q  115 ctcc 118  Q
    ||||    
T  50695 ctcc 50698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 13905 - 13832
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcct 74  Q
    |||||||||| ||||| ||||| ||| ||||||||||  | ||||||||||| || ||||||||||||||||||    
T  13905 agagttatcacgataaacgtagaaaagatcttgagttttaggaaggagaccacgtatttttgagagtcactcct 13832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 5 - 118
Target Start/End: Original strand, 106644 - 106757
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    ||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| |||||||| | |||||| ||||      
T  106644 ttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggtgttggtcctgctttaaagtgt 106743  T
Q  105 aagaagttgactcc 118  Q
    | ||||||||||||    
T  106744 aggaagttgactcc 106757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 10806 - 10932
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||| |||| ||  |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| | || ||||| |||||    
T  10806 agagttatcatgacaagtgtagaaaggatcttgagttacaagaaggagaccatgtgtttttgagagtcactcctgtgacaggtataggtcgtgccttgaa 10905  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     || ||||||||||| ||||| |||||    
T  10906 atcgaagaagttgacaccgaggtttat 10932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 17142 - 17070
Alignment:
Q  55 tgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17142 tgtttttgagagtcactcatgtgactggtgttggacgtgccttgaagtcaaagaagttgactccgagatttat 17070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 16483 - 16609
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||||||||| |  |||||   || ||||||||||| ||||| ||||| || |||||||| |||| ||||||||||||||| |||||    
T  16483 agagttatcatgataagcgtagggaggatcttatatttcaagaaggagatcatgtattttttagggtcactccagtgattggtgttggacgtgcattgaa 16582  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
    ||| ||||||||||| |||||||||||    
T  16583 gtcgaagaagttgacaccgagatttat 16609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 86571 - 86697
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||| ||||||||  |||||||||| ||||||||| ||||||||||||| |||||||||| |||||| ||||||||||||||  | ||    
T  86571 agagttatcatgataatcgtaggaaggatcttgagtttcaagaaggataccatgtgttttttagagtcactcttgtgaccggtgttggacgtgcactaaa 86670  T
Q  101 gtcaaagaagttgactccgagatttat 127  Q
     ||||||||  ||||| |||| |||||    
T  86671 atcaaagaaactgacttcgaggtttat 86697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 8510 - 8446
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 283  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8510 acaagacatttctttattgattttgttttgtttcaaaataataaagtccctagaatagttagtcc 8446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 8602 - 8546
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  8602 tgttggaataagccctaatagccaatctatattgattgggttcggctttgtatcatg 8546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4114 - 3995
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||||||||||   |||||||| ||||| ||||| ||||||||| ||| |||||||||| |||| ||||| || ||||| |||||    
T  4114 agagttaccatgacaagcgtaggaaagtccttgagtttcaagagggagatcatgtgtttctgatagtcactcctatgacaggtgtaggtcgtgcgttgaa 4015  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  4014 gtctaagaagttgactccga 3995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5658 - 5747
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacg 91  Q
    ||||||||||||||||||| |  ||  |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||    
T  5658 agagttatcatgataagcgcaa-aaggatcttgagtttcaagaaggagaccatgtatttttgagagtcactcctgtgaccggtgttggacg 5747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 26352 - 26262
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||| |||| ||||| || ||||| |||||||| ||||||||||||||||    
T  26352 cttgagtttcaagagggagatcatgtgtttttgagagtcactcctatgacgggtgtaggccgtgcgttgaagtctaagaagttgactccga 26262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 4130 - 4013
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  4130 agagttaccatgacaagcgtaggaaggcccttgagtttcaagatggagatcatgtgtttctgagagttactcctatgacgggtgtaggacgtgcattgaa 4031  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  4030 gtctaagaagttgactcc 4013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 2033 - 1916
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||| ||||||    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||||    
T  2033 agagttaccatgacaagcataggaaggcccttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacaggtgtaggacgtgcattgaa 1934  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  1933 gtctaagaagttgactcc 1916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 1236 - 1353
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  1236 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttactcctatgacgggtgtaggacgtgcattgaa 1335  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  1336 gtctaagaagttgactcc 1353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 51930 - 52047
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||| ||| |||||    
T  51930 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacgggtgtaggacatgcattgaa 52029  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  52030 gtctaagaagttgactcc 52047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 23825 - 23769
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23825 tgttggaataagccctaatagccaatctatattgattgggtttggctttgtatcatg 23769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 14318 - 14435
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||||||||||||||||||||    ||||||||  | || || || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  14318 agagttatcatgataagcgtaggaaggcccttgagttttaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggacgtgcattgaa 14417  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  14418 gtcgaggaagttgactcc 14435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 25790 - 25890
Alignment:
Q  5 ttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtca 104  Q
    |||||||||||||||||||||  |  ||||||| || |||||| ||||||| ||||| |||||||||||| ||||||| ||||||||||| |||||||||    
T  25790 ttatcatgataagcgtaggaaggactttgagtttcaggaaggaaaccatgtattttttagagtcactcctatgactggggttggacgtgcattgaagtca 25889  T
Q  105 a 105  Q
    |    
T  25890 a 25890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19088 - 18969
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| ||||||| |||  | |||||||| ||||| |||||||||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  19088 agagctatcatgacaagcgtatgaaggaccttgagtttcaagagggagaccatgtgttcttgagagtcactcctatgacaggtgtaggtcgtgcattaaa 18989  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  18988 atctaagaagttgactccga 18969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23250 - 23131
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| ||||||| |||  | |||||||| ||||| |||||||||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  23250 agagctatcatgacaagcgtatgaaggaccttgagtttcaagagggagaccatgtgttcttgagagtcactcctatgacaggtgtaggtcgtgcattaaa 23151  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  23150 atctaagaagttgactccga 23131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 52; Significance: 1e-20; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33744 - 33863
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||  | |||||||| ||||| ||||| |||||||| ||||||||||||||| |||| ||||| || ||||| || ||    
T  33744 agagctatcatgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagtcactcctatgacaggtgtaggccgtgcattaaa 33843  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  33844 atctaagaagttgactccga 33863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 40497 - 40380
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| || ||||| |||||||| ||    
T  40497 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggagttggtcgtgctttaaa 40398  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  40397 gtgtaggaagttgactcc 40380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 14295 - 14205
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| || ||||| |||||||| ||||||||||||||||    
T  14295 cttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacgggtgtaggtcgtgcgttgaagtcgaagaagttgactccga 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18604 - 18721
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||||| |||||| |||| ||||| ||| |||| |||||    
T  18604 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagttactcctatgacgggtgtaggatgtgcattgaa 18703  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  18704 gtctaagaagttgactcc 18721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 16523 - 16579
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  16523 tgttggaataagccctaatagccaatctatattgattgggtttggctttatatcatg 16579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 252
Target Start/End: Original strand, 16615 - 16648
Alignment:
Q  219 acaaggcatttctttattgattttgttttgtttc 252  Q
    |||||||||||||||||||||||||||||| |||    
T  16615 acaaggcatttctttattgattttgttttgnttc 16648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 27758 - 27641
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || ||||| ||||||||| ||||||| |||||| |||| ||||| |||||||| | |||    
T  27758 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggagatcatgtgtttctgagagttactcctatgacaggtgtaggacgtgcatcgaa 27659  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  27658 gtcgaagaagttgactcc 27641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 1218 - 1335
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| ||||| ||| |||| |||| ||||| || ||||| |||||||    
T  1218 agttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagaatcattcctatgacgggtgtaggtcgtgcgttgaagt 1317  T
Q  103 caaagaagttgactccga 120  Q
    | ||||||||||||||||    
T  1318 ctaagaagttgactccga 1335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 109 - 1
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| |||||||| |||||    
T  109 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacgggtgtaggacgtgcattgaa 10  T
Q  101 gtcaaagaa 109  Q
    ||| |||||    
T  9 gtctaagaa 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 1385 - 1297
Alignment:
Q  32 tgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||| ||||| ||||| ||||||||| |||||||||||||| |||| ||||| || ||||| |||||||| ||||||||||||||||    
T  1385 tgagtttcaagagggagatcatgtgtttctgagagtcactcctatgacaggtgtaggtcgtgcgttgaagtctaagaagttgactccga 1297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 7103 - 7222
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| |||   |||||||  ||||| ||||| ||||||||| |||| || |||||| |||| ||||| || ||||| |||||    
T  7103 agagttatcatgacaagcgtagaaaagcccttgagtgtcaagagggagatcatgtgtttctgagggttactcctatgacaggtgtaggtcgtgcgttgaa 7202  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  7203 gtctaagaagttgactccga 7222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 10150 - 10267
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| | |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||||||| |||||    
T  10150 agagctatcatgacaagcgtaggaaagaccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggacgtgcattgaa 10249  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  10250 gtcgaagaagttgactcc 10267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 20222 - 20105
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||| ||    |||||||| ||||| ||||| ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  20222 agagttatcatgacaagcgtagaaaggcccttgagtttcaagagggagatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcgttgaa 20123  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |||||||| |||||    
T  20122 gtcgaagaagtttactcc 20105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 13428 - 13545
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| || ||||||||    |||||||| || || || || ||||| ||| | ||||| |||||| |||| ||||| |||||||| |||||    
T  13428 agagttatcatgacaaacgtaggaaggcccttgagtttcaggagggtgatcatgtatttctaagagttactcctatgacgggtgtaggacgtgcattgaa 13527  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  13528 gtcgacgaagttgactcc 13545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 17198 - 17315
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| || ||||||||    |||||||| || || || || ||||| ||| | || || |||||| |||| ||||| |||||||| |||||    
T  17198 agagttatcatgacaaacgtaggaaggcccttgagtttcaggagggtgatcatgtatttcttagggttactcctatgacgggtgtaggacgtgcattgaa 17297  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  17298 gtcgacgaagttgactcc 17315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 47363 - 47246
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||||| ||||||||| |||| || |||||| | || ||||| |||||||| |||||    
T  47363 agagttaccatgaaaagcgtaggaaggcccttgagtttcaagagggagatcatgtgtttctgagggttactcctataacgggtgtaggacgtgcattgaa 47264  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  47263 gtctaagaagttgactcc 47246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1124 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1124
Description:

Target: scaffold1124; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 308 - 220
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| ||||| ||||| ||| ||||||| |||||| |||| |||||  |||||||||||||||| ||||||||||||||    
T  308 cttgagtttcaagagggagatcatgtatttctgagagttactcctatgacgggtgtatgacgtgctttgaagtctaagaagttgactcc 220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 32 - 120
Target Start/End: Complemental strand, 10006 - 9918
Alignment:
Q  32 tgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||| ||||| ||||| ||||||||| ||||||| |||||| || | ||||| |||||||| |||||||| ||||||||||||||||    
T  10006 tgagtttcaagagggagatcatgtgtttctgagagttactcctatggcgggtgtaggacgtgcgttgaagtctaagaagttgactccga 9918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 45; Significance: 2e-16; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 27404 - 27520
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| || || |||||||||||    |||||||| ||||| ||||| ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  27404 agagttaccacgacaagcgtaggaaggcccttgagtttcaagagggagatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 27503  T
Q  101 gtcaaagaagttgactc 117  Q
    ||| |||||||||||||    
T  27504 gtctaagaagttgactc 27520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 38241 - 38357
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| || || |||||||||||    |||||||| ||||| ||||| ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  38241 agagttaccaagacaagcgtaggaaggcccttgagtttcaagagggagatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 38340  T
Q  101 gtcaaagaagttgactc 117  Q
    ||| |||||||||||||    
T  38341 gtctaagaagttgactc 38357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37441 - 37322
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||     ||||||| ||||   |||| ||||||||| | |||||||| ||| |||| ||||| || ||||| |||||    
T  37441 agagttaccatgacaagcgtaggaaggccattgagtttcaagggagagatcatgtgtttcttagagtcacccctatgacaggtgtaggtcgtgcgttgaa 37342  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  37341 gtctaagaagttgactccga 37322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 4567 - 4618
Alignment:
Q  76 tgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  4567 tgactggtgttggacgtgcattgaagtcaaagaagtttactccgagatttat 4618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 6423 - 6305
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgttt-ttgagagtcactcctgtgactggtgttggacgtgctttga 99  Q
    |||| |||||||| |||||||||||| | |||||||| || ||||| |||||||| |||  |||| || |||||| |||| ||||| |||||||| ||||    
T  6423 agagctatcatgacaagcgtaggaaagaccttgagtttcaggaaggtgaccatgtttttcctgagggttactcctatgacgggtgtaggacgtgcattga 6324  T
Q  100 agtcaaagaagttgactcc 118  Q
    |||| | ||||||||||||    
T  6323 agtcgaggaagttgactcc 6305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1710 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 977 - 1094
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | ||||||||| |||||||| |||||||||||    
T  977 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctgtgaccggtgttggtcgtgctttgaa 1076  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  1077 gtgtaggaagttgactcc 1094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 14762 - 14661
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | |||||  |  ||||||| || |  || || ||||||||||||||||| | || |||||||||||||||||||||||||||    
T  14762 agagttatcatgataagaggaggaaggacattgagtttcaggttggggatcatgtgtttttgagagtgaatcatgtgactggtgttggacgtgctttgaa 14663  T
Q  101 gt 102  Q
    ||    
T  14662 gt 14661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 7877 - 7994
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||||||| | |||||  || ||||||| ||||  || || ||||||||||||||||| | ||||||||| || ||||| |||||||||||    
T  7877 agagctatcatgataagaggaggaaggatattgagtttcaagttggtgatcatgtgtttttgagagtgaatcctgtgaccggagttggtcgtgctttgaa 7976  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  7977 gtgtaggaagttgactcc 7994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 466 - 583
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| || ||||||||    |||||||| || || || || ||||| ||| | || || |||||| |||| ||||| |||||||| |||||    
T  466 agagttatcatgacaaacgtaggaaggcccttgagtttcaggagggtgatcatgtatttcttagggttactcctatgacgggtgtaggacgtgcattgaa 565  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  566 gtcgacgaagttgactcc 583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 11127 - 11010
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| || ||||||||    |||||||| || || || || ||||| ||| | || || |||||| |||| ||||| |||||||| |||||    
T  11127 agagttatcatgacaaacgtaggaaggcccttgagtttcaggagggtgatcatgtatttcttagggttactcctatgacgggtgtaggacgtgcattgaa 11028  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  11027 gtcgacgaagttgactcc 11010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 26472 - 26383
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||||||||||||||||||||| | ||||||||||||    
T  26472 tcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgctttgaagtcgaggaagttgactcc 26383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28333 - 28450
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| |||| ||| || |||||||||||||| || | || |||||| |||||||| |||||||||||    
T  28333 agagttatcatgataagaggagaaaggatattgagttacaagtaggtgatcatgtgtttttgagggtgaatcatgtgaccggtgttggtcgtgctttgaa 28432  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  28433 gtgtaggaagttgactcc 28450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 49100 - 49217
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||||||    |||||||| ||||| ||| | ||||||||| ||||||| || ||| |||| ||||| ||| |||| |||||    
T  49100 agagttaccatgacaagcgtaggaaggcccttgagtttcaagagggaaatcatgtgtttctgagagtaacacctatgacaggtgtaggaagtgcgttgaa 49199  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  49200 gtctaagaagttgactcc 49217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 51 - 120
Target Start/End: Original strand, 57933 - 58002
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    ||||| ||||||||||| |||||  |||| ||||| |||||||||||||| || | ||||||||||||||    
T  57933 catgtatttttgagagttactccgatgacgggtgtaggacgtgctttgaaatcgaggaagttgactccga 58002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0705 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0705
Description:

Target: scaffold0705; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 97 - 41
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||||||||||||||||||| ||||||  ||| |||||||||||||    
T  97 tgttggaataagccctaatagccaatctataatgattgattttggctttgtatcatg 41  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0637 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0637
Description:

Target: scaffold0637; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 8944 - 9000
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||||||||||||| |||||||||||||| |||| ||||||| |||||||||||||    
T  8944 tgttggaataagcccaaatagccaatctatgttgaatgggtttggctttgtatcatg 9000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 4235 - 4323
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| || || ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||||| | ||||||||||||    
T  4235 cttgagtttcaagagggggatcatgtgtttttaagagttactcctatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 4323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 49303 - 49391
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| || || ||||||||| |||| |||| |||| |||| ||||| |||||||| |||||||| ||||||||||||||    
T  49303 cttgagtttcaagagggtgatcatgtgtttctgagggtcattcctatgacgggtgtgggacgtgcattgaagtctaagaagttgactcc 49391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 13997 - 14085
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| || || ||||||||||| ||||| |||||| |||| ||||| |||||||| |||||||| ||||| ||||||||    
T  13997 cttgagtttcaagagggggatcatgtgtttttaagagttactcctatgacgggtgtaggacgtgcattgaagtcgaagaaattgactcc 14085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 5020 - 5137
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || |  || ||||| ||| ||||||| |||||| |||| ||||| |||||||| |||||    
T  5020 agagttatcatgacaagcgtaggaaggcccttgagtttcaggaggatgatcatgtatttctgagagttactcctatgacgggtgtaggacgtgcattgaa 5119  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  5120 gtcgaggaagttgactcc 5137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5981 - 6100
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||    |||||||| ||||| ||||  ||||||||| |||| || |||||| |||| ||||| || ||||| |||||    
T  5981 agagttaccatgacaagcgtagaaaggcccttgagtttcaagagggagctcatgtgtttctgagggttactcctatgacgggtgtaggtcgtgcattgaa 6080  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  6081 gtctaagaagttgactccga 6100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5069 - 5188
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||    |||||||| ||||| ||||| ||||||||| ||||| |||||||| |||| ||||| ||  |||  |||||    
T  5069 agagttaccatgacaagcgtagaaaggcccttgagtttcaagagggagatcatgtgtttctgagaatcactcctatgacgggtgtaggttgtgtgttgaa 5168  T
Q  101 gtcaaagaagttgactccga 120  Q
    ||| ||||||||||||||||    
T  5169 gtctaagaagttgactccga 5188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 3 - 118
Target Start/End: Complemental strand, 14894 - 14779
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||||||||||||| | || ||  || ||||||| ||||  || || ||||||||||| || || | |||||||||||||||||| |||||||||||||    
T  14894 agttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgttttttagggtgaatcctgtgactggtgttggtcgtgctttgaagt 14795  T
Q  103 caaagaagttgactcc 118  Q
      | ||||||||||||    
T  14794 gtaggaagttgactcc 14779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 767 - 648
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||| ||| |||||||||||  | |||||||| ||||| ||||| |||||||| |||||||| |||||| |||| ||||| ||  |||| || ||    
T  767 agagctatcgtgacaagcgtaggaaggaccttgagtttcaagagggagatcatgtgttcttgagagttactcctatgacaggtgtaggcagtgcattaaa 668  T
Q  101 gtcaaagaagttgactccga 120  Q
     || ||||||||||||||||    
T  667 atctaagaagttgactccga 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 5450 - 5333
Alignment:
Q  3 agttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagt 102  Q
    ||||| ||||||||||| |||||    |||||||| || || || || ||||| ||||||||||| |||||  |||| ||||| |||||||||||||| |    
T  5450 agttaccatgataagcggaggaaggcccttgagtttcaggagggtgatcatgtatttttgagagttactccgatgacgggtgtaggacgtgctttgaaat 5351  T
Q  103 caaagaagttgactccga 120  Q
    | | ||||||||||||||    
T  5350 cgaggaagttgactccga 5333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 430 - 313
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| |||||||| |||||||||||| | |||||||| || || || |||||||| ||| |||| || |||||| |||| ||| | |||||||| |||||    
T  430 agagctatcatgacaagcgtaggaaagaccttgagtttcaggagggtgaccatgtttttctgagggttactcctatgacgggtataggacgtgcgttgaa 331  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  ||||| ||||||||    
T  330 gttgaagaacttgactcc 313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 118
Target Start/End: Complemental strand, 16887 - 16798
Alignment:
Q  29 tcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| || || || || ||||| ||| |||| ||||||||| |||| |||||||||||||| |||||||| | ||||||||||||    
T  16887 tcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgttggacgtgcattgaagtcgaggaagttgactcc 16798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 25932 - 26049
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| |||||||| ||    |||||||| ||||| || || ||||| ||| ||||||| |||||| |||| ||||| ||| |||| |||||    
T  25932 agagttaccatgacaagcgtagaaaggcccttgagtttcaagagggggatcatgtatttctgagagttactcctatgacgggtgtaggatgtgcattgaa 26031  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  26032 gtcgaagaagttgactcc 26049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 38954 - 39071
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| ||||| || ||  ||||||| || || || || || ||||| ||| |||||||||||||| |||| ||||| || ||||| |||||    
T  38954 agagttatcatgacaagcgaagaaaggatcttgaatttcaggagggtgatcatgtttttctgagagtcactcctttgacgggtgtcggtcgtgccttgaa 39053  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  39054 gtcgaggaagttgactcc 39071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 46393 - 46276
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | |||||| || |||||||| |||||||||||    
T  46393 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtaaatcctgtaaccggtgttggtcgtgctttgaa 46294  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  46293 gtgtaggaagttgactcc 46276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 37 - 1
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgatt 163  Q
    |||||||||||||||||||||||||||||||||||||    
T  37 tgttggaataagccctaatagccaatctatattgatt 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 2961 - 2873
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| ||||| ||| | ||||| ||| ||||||| |||||| |||| ||||| |||||||| ||||||||  |||||||||||||    
T  2961 cttgagtttcaagagggatatcatgtatttatgagagttactcctatgacgggtgtaggacgtgcattgaagtctgagaagttgactcc 2873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 13262 - 13364
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||| ||||||||||| || |||||||   | ||||| || ||||| || ||||| ||||| ||||||| ||| ||||| || ||||| |||||||||||    
T  13262 agagctatcatgataaacgaaggaaatcattggagtttcaggaaggggatcatgtatttttaagagtcaatccggtgacgggcgttgggcgtgctttgaa 13361  T
Q  101 gtc 103  Q
    |||    
T  13362 gtc 13364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0554 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0554
Description:

Target: scaffold0554; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 3348 - 3281
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||||||||||| | ||||||||| ||| |||| |||||||||||||  | ||||||||||||    
T  3348 catgtgtttttgagagtgaatcctgtgaccggtattggtcgtgctttgaagtgtaggaagttgactcc 3281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 2330 - 2263
Alignment:
Q  60 ttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccgagatttat 127  Q
    |||||||||||||  ||||  |||||||||||||| ||||| |||||||||||||||| ||| |||||    
T  2330 ttgagagtcactctagtgataggtgttggacgtgcattgaaatcaaagaagttgactctgaggtttat 2263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 42400 - 42517
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| ||| |||| |||||    
T  42400 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggaagtgcattgaa 42499  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  42500 gtcgaggaagttgactcc 42517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 47466 - 47583
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||| |||||||||||    |||||||| || || || || ||||| ||| |||| || |||||| |||| ||||| |||  ||| |||||    
T  47466 agagttatcatgacaagcgtaggaaggcccttgagtttcaggagggtgatcatgtatttctgagggttactcctatgacgggtgtaggaaatgcattgaa 47565  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| | ||||||||||||    
T  47566 gtcgaggaagttgactcc 47583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 10256 - 10202
Alignment:
Q  129 ttggaataagccctaatagccaatctatattgattgggtttagctttgtatcatg 183  Q
    ||||| ||||| |||||||||||||||||||||||| ||||  ||||||||||||    
T  10256 ttggagtaagctctaatagccaatctatattgattgagtttgactttgtatcatg 10202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 269
Target Start/End: Complemental strand, 10158 - 10127
Alignment:
Q  238 attttgttttgtttcaaaataataaagtccct 269  Q
    ||||||||||||||||||||||||||||||||    
T  10158 attttgttttgtttcaaaataataaagtccct 10127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Original strand, 1121 - 1222
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||| || ||||||| |  |  || || ||||| ||||| ||||| | |||||||||||||||||| |||||||||||    
T  1121 agagttatcatgataagaggagaaaagatattgagtttctggttggcgatcatgtattttttagagtgaatcctgtgactggtgttggtcgtgctttgaa 1220  T
Q  101 gt 102  Q
    ||    
T  1221 gt 1222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 453 - 570
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || |  |||||||||||||| || | ||||||||| |||||||| ||||||||| |    
T  453 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgctcatgtgtttttgagggtgaatcctgtgaccggtgttggccgtgctttgga 552  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  553 gtgtaggaagttgactcc 570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 10594 - 10493
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| ||||  || || |||||||||||||| || | |||| |||| |||||||| |||||||||||    
T  10594 agagttatcatgataagaggagaaaggatattgagtttcaagttggtgatcatgtgtttttgagggtgaatcctttgaccggtgttggtcgtgctttgaa 10495  T
Q  101 gt 102  Q
    ||    
T  10494 gt 10493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 5980 - 5879
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||  ||||  || || |||||||||||||| || | |||| |||| |||||||| |||||||||||    
T  5980 agagttatcatgataagaggagaaaggatattgagtatcaagttggtgatcatgtgtttttgagggtgaatcctatgaccggtgttggtcgtgctttgaa 5881  T
Q  101 gt 102  Q
    ||    
T  5880 gt 5879  T

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Target: scaffold0162 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 13147 - 13030
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||| || |  || || |||||||| |||||||| |  |||||||| |||||||| |||||||||||    
T  13147 agagttatcatgataagaggagaaaggatattgagtttcaggttggtgatcatgtgttgttgagagtgaaccctgtgaccggtgttggtcgtgctttgaa 13048  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||  | ||||||||||||    
T  13047 gtgtaggaagttgactcc 13030  T

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Target: scaffold0089 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 16780 - 16897
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||| ||||| ||||| || ||  |||||||||| || || || || ||||| ||| |||| ||||||||| |||| ||||| || |||||||||||    
T  16780 agagttaccatgacaagcgaagaaaggatcttgagtttcaggagggtgatcatgtttttctgagggtcactcctttgacgggtgtcggtcgtgctttgaa 16879  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| |  |||||||||||    
T  16880 gtcgagaaagttgactcc 16897  T

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Target: scaffold0465 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 1301 - 1385
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgt 85  Q
    |||| |||||||| |||||||||||| | |||||||| || ||||| |||||||| ||| |||| || |||||| |||| |||||    
T  1301 agagctatcatgacaagcgtaggaaagaccttgagtttcaggaaggtgaccatgtttttctgagggttactcctatgacgggtgt 1385  T

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Target: scaffold0156 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 27436 - 27348
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| || ||||| ||| | ||||| ||| ||||||| |||||| || | ||||| |||||||| |||||||| ||||||||||||||    
T  27436 cttgaatttcaagagggatatcatgtatttctgagagttactcctatgtcgggtgtaggacgtgcattgaagtcgaagaagttgactcc 27348  T

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Target: scaffold0114 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 20332 - 20244
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||||||| |||| || |||| | |||| ||||| |||||||| |||||||| ||||||||||||||    
T  20332 cttgagtttcaggagggtgatcatgtgtttctgagggttactcttatgacgggtgtgggacgtgcattgaagtcgaagaagttgactcc 20244  T

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Target: scaffold0692 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 3992 - 4059
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||||| ||||| | ||||||||| |||||||| |||||||| ||||  | ||||||||||||    
T  3992 catgtgtttttaagagtgaatcctgtgaccggtgttggtcgtgctttaaagtgtaggaagttgactcc 4059  T

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Target: scaffold0117 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 10426 - 10493
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||| |||||||||||| | ||||||||| |||||||| | |||||||||||  | ||||||||||||    
T  10426 catgggtttttgagagtgaatcctgtgaccggtgttggtcatgctttgaagtgtaggaagttgactcc 10493  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 118
Target Start/End: Complemental strand, 248802 - 248735
Alignment:
Q  51 catgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||| ||| |||| ||||||||| |||| ||||| |||||||| |||||||| | ||||||||||||    
T  248802 catgtttttctgagggtcactcctatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 248735  T

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Target: scaffold0239 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 12877 - 12967
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactccga 120  Q
    |||||||| || || || || ||||| ||||||||||| |||||  |||| ||||| | |||||||||||| |||| |||||| |||||||    
T  12877 cttgagtttcaggagggtgatcatgtatttttgagagttactccgatgacgggtgtagaacgtgctttgaaatcaaggaagttaactccga 12967  T

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Target: scaffold0383 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 8589 - 8488
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    ||||||||||||||||| | || ||  || ||||||  ||||  || || |||||||||||||| || | |||| |||| |||||||| |||||||||||    
T  8589 agagttatcatgataagaggagaaaggatattgagtatcaagttggtgatcatgtgtttttgagggtgaatcctatgaccggtgttggtcgtgctttgaa 8490  T
Q  101 gt 102  Q
    ||    
T  8489 gt 8488  T

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Target: scaffold0149 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 13380 - 13437
Alignment:
Q  61 tgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||| |||||| |||| ||||| |||| ||| |||||||| ||||||||||||||    
T  13380 tgagagttactcctatgacgggtgtaggacatgcattgaagtctaagaagttgactcc 13437  T

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Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 39978 - 39861
Alignment:
Q  1 agagttatcatgataagcgtaggaaatatcttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaa 100  Q
    |||||||  |||| |||||||| ||  | |||||||| || || ||||| ||||| ||| ||||||| |||||| |||| ||||| ||||| ||  | ||    
T  39978 agagttactatgacaagcgtagaaaggaccttgagtttcaggagggagatcatgtatttctgagagttactcctatgacgggtgtaggacgcgcactcaa 39879  T
Q  101 gtcaaagaagttgactcc 118  Q
    ||| ||||||||||||||    
T  39878 gtctaagaagttgactcc 39861  T

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Target: scaffold0032 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 320
Target Start/End: Original strand, 92194 - 92267
Alignment:
Q  248 gtttcaaaataataaagtccctagaatagttagtccgtttaa-tggaacattaagtataacttaattgtgagac 320  Q
    |||| ||| |||||||||| ||||||||  ||||   ||||| ||||||||||||||||||||||| |||||||    
T  92194 gttttaaagtaataaagtctctagaatatctagttattttaaatggaacattaagtataacttaatcgtgagac 92267  T

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Target: scaffold0170 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 127 - 179
Target Start/End: Original strand, 5878 - 5930
Alignment:
Q  127 tgttggaataagccctaatagccaatctatattgattgggtttagctttgtat 179  Q
    ||||||| |||| | ||||||||||||||||||||||| ||||  ||||||||    
T  5878 tgttggagtaagtcataatagccaatctatattgattgagtttgactttgtat 5930  T

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Target: scaffold0067 (Bit Score: 29; Significance: 0.0000006; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 52275 - 52363
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||| |||| || |||||| |||  ||||| |||||||| |||||||| ||||||||||||||    
T  52275 cttgagtttcaggagggcgatcatgtatttctgagggttactcctatgatgggtgtaggacgtgcattgaagtcgaagaagttgactcc 52363  T

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Target: scaffold0067; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 61309 - 61397
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||| |||| || |||||| |||  ||||| |||||||| |||||||| ||||||||||||||    
T  61309 cttgagtttcaggagggcgatcatgtatttctgagggttactcctatgatgggtgtaggacgtgcattgaagtcgaagaagttgactcc 61397  T

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Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 118
Target Start/End: Original strand, 67697 - 67785
Alignment:
Q  30 cttgagttccaagaaggagaccatgtgtttttgagagtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    |||||||| || || || || ||||| ||| |||| || |||||| |||  ||||| |||||||| |||||||| ||||||||||||||    
T  67697 cttgagtttcaggagggcgatcatgtatttctgagggttactcctatgatgggtgtaggacgtgcattgaagtcgaagaagttgactcc 67785  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 42957 - 42905
Alignment:
Q  66 gtcactcctgtgactggtgttggacgtgctttgaagtcaaagaagttgactcc 118  Q
    ||||||||| |||| ||||| |||||||| |||||||| | ||||||||||||    
T  42957 gtcactcctatgacgggtgtaggacgtgcattgaagtcgaggaagttgactcc 42905  T

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