View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13386_low_46 (Length: 207)
Name: NF13386_low_46
Description: NF13386
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13386_low_46 |
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Alignment Details
Target: chr1 (Bit Score: 121; Significance: 3e-62; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 15 - 188
Target Start/End: Original strand, 35246866 - 35247045
Alignment:
| Q |
15 |
gagtgagttgtgttcttctatggacgaatgtgaatgattcaaggaaatggaacgaccaattcgaagg------agagtgaacaatgttgaaagaaacaag |
108 |
Q |
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| T |
35246866 |
gagtgagttgtgttcttctacggacgaacgtgaatgattcaaggaaatggaacgaccaattcgaagggaaaggaaagtgaaaaatgttgaaagaaacaag |
35246965 |
T |
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| Q |
109 |
ggagagaaactgaagaagcaaataaaagtgtgaaaatgacgtaaaggtcggtagtaacaaaatcaagggaaacatagaat |
188 |
Q |
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| T |
35246966 |
ggagagaaactgaagaagccaataaaagtgtgaaaatgaagtaaaggtcagtagtaacaagatcaaaggaaacatagaat |
35247045 |
T |
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