View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13387_low_4 (Length: 337)

Name: NF13387_low_4
Description: NF13387
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13387_low_4
NF13387_low_4
[»] chr3 (67 HSPs)
chr3 (1-260)||(42772123-42772370)
chr3 (105-260)||(34641083-34641234)
chr3 (107-260)||(26135888-26136039)
chr3 (103-260)||(24253813-24253968)
chr3 (140-260)||(40858656-40858774)
chr3 (111-260)||(10943620-10943767)
chr3 (108-260)||(17474209-17474359)
chr3 (155-260)||(41414169-41414272)
chr3 (107-260)||(44412452-44412603)
chr3 (109-238)||(55428492-55428619)
chr3 (105-260)||(8432261-8432412)
chr3 (140-260)||(48683703-48683823)
chr3 (160-259)||(18086035-18086133)
chr3 (162-260)||(42699669-42699765)
chr3 (163-260)||(21090129-21090224)
chr3 (287-335)||(42772046-42772094)
chr3 (162-245)||(54985750-54985838)
chr3 (163-260)||(36727268-36727362)
chr3 (18-106)||(42772928-42773016)
chr3 (103-260)||(18654598-18654753)
chr3 (182-260)||(46978518-46978594)
chr3 (100-177)||(24560212-24560289)
chr3 (197-260)||(16884064-16884124)
chr3 (101-260)||(24560308-24560465)
chr3 (107-187)||(41110323-41110403)
chr3 (97-140)||(30200090-30200133)
chr3 (103-177)||(28582681-28582755)
chr3 (287-335)||(44412555-44412603)
chr3 (190-260)||(27197734-27197802)
chr3 (102-165)||(36568901-36568964)
chr3 (1-48)||(42770169-42770216)
chr3 (180-242)||(45663220-45663279)
chr3 (103-177)||(220569-220643)
chr3 (108-166)||(18654784-18654842)
chr3 (109-255)||(37807176-37807321)
chr3 (288-337)||(44412361-44412410)
chr3 (293-337)||(5903549-5903593)
chr3 (293-337)||(24560217-24560261)
chr3 (293-337)||(25655172-25655216)
chr3 (108-172)||(28581189-28581253)
chr3 (297-333)||(31664391-31664427)
chr3 (297-333)||(31931969-31932005)
chr3 (293-337)||(34641190-34641234)
chr3 (105-177)||(41110493-41110565)
chr3 (287-334)||(21090265-21090312)
chr3 (105-140)||(37102159-37102194)
chr3 (103-145)||(651929-651971)
chr3 (102-140)||(21773981-21774019)
chr3 (287-337)||(27197843-27197893)
chr3 (106-140)||(40858764-40858798)
chr3 (7-45)||(42772820-42772858)
chr3 (105-147)||(44412361-44412403)
chr3 (295-333)||(55428581-55428619)
chr3 (300-337)||(21773782-21773819)
chr3 (296-337)||(24253721-24253762)
chr3 (120-177)||(30200263-30200320)
chr3 (103-140)||(34641000-34641037)
chr3 (103-140)||(48683813-48683850)
chr3 (219-260)||(54996792-54996833)
chr3 (298-334)||(6803406-6803442)
chr3 (297-337)||(9312476-9312516)
chr3 (105-145)||(9312673-9312713)
chr3 (294-334)||(18654802-18654842)
chr3 (293-337)||(28582709-28582753)
chr3 (4-48)||(42770709-42770752)
chr3 (14-46)||(42772012-42772044)
chr3 (220-260)||(46204977-46205017)
[»] chr8 (57 HSPs)
chr8 (103-260)||(43732778-43732933)
chr8 (101-260)||(12022138-12022296)
chr8 (108-259)||(16024246-16024394)
chr8 (101-250)||(8815137-8815284)
chr8 (101-259)||(34196402-34196555)
chr8 (105-258)||(30365223-30365374)
chr8 (103-260)||(40632994-40633142)
chr8 (162-260)||(8671849-8671947)
chr8 (140-260)||(9933332-9933450)
chr8 (109-239)||(29937614-29937742)
chr8 (160-260)||(20472747-20472845)
chr8 (135-257)||(39449398-39449518)
chr8 (103-258)||(31738516-31738669)
chr8 (177-260)||(6453275-6453356)
chr8 (181-260)||(43826423-43826500)
chr8 (103-177)||(31543244-31543318)
chr8 (105-260)||(41103504-41103659)
chr8 (103-178)||(3726861-3726936)
chr8 (103-176)||(7503127-7503200)
chr8 (167-258)||(9434360-9434450)
chr8 (105-174)||(9718654-9718723)
chr8 (101-200)||(11785676-11785774)
chr8 (287-337)||(43732679-43732729)
chr8 (103-172)||(2248450-2248519)
chr8 (99-195)||(12022297-12022393)
chr8 (105-193)||(31543072-31543160)
chr8 (102-145)||(2412961-2413004)
chr8 (298-337)||(4247725-4247764)
chr8 (287-337)||(12022337-12022387)
chr8 (191-260)||(38198135-38198202)
chr8 (108-193)||(16653105-16653190)
chr8 (198-254)||(22591501-22591555)
chr8 (111-172)||(36309020-36309081)
chr8 (101-145)||(2481977-2482021)
chr8 (293-337)||(8815341-8815385)
chr8 (293-337)||(31543072-31543116)
chr8 (293-337)||(31543272-31543316)
chr8 (293-337)||(43732887-43732931)
chr8 (294-337)||(2248452-2248495)
chr8 (109-172)||(7394638-7394701)
chr8 (105-140)||(9718489-9718524)
chr8 (105-259)||(24243050-24243199)
chr8 (105-195)||(40990181-40990272)
chr8 (111-177)||(1281149-1281215)
chr8 (295-333)||(7394663-7394701)
chr8 (295-337)||(9718681-9718723)
chr8 (118-200)||(11033567-11033649)
chr8 (105-187)||(34634305-34634387)
chr8 (103-140)||(1026857-1026894)
chr8 (105-194)||(8815296-8815385)
chr8 (294-335)||(16024155-16024196)
chr8 (219-260)||(26167847-26167888)
chr8 (105-177)||(1027020-1027092)
chr8 (297-337)||(9933240-9933280)
chr8 (103-170)||(11033417-11033482)
chr8 (219-259)||(27483652-27483692)
chr8 (293-337)||(41103504-41103548)
[»] chr7 (74 HSPs)
chr7 (102-259)||(33519140-33519295)
chr7 (100-250)||(36267548-36267696)
chr7 (103-260)||(48881556-48881711)
chr7 (105-259)||(28074103-28074255)
chr7 (111-260)||(37620865-37621012)
chr7 (121-260)||(35422055-35422192)
chr7 (105-259)||(48015299-48015451)
chr7 (161-260)||(39646560-39646657)
chr7 (126-259)||(37925933-37926064)
chr7 (176-260)||(21857438-21857520)
chr7 (131-260)||(2087765-2087896)
chr7 (179-260)||(3215934-3216013)
chr7 (130-248)||(31364070-31364183)
chr7 (102-260)||(41496954-41497110)
chr7 (160-260)||(3143571-3143673)
chr7 (105-242)||(30592253-30592388)
chr7 (105-177)||(39856037-39856109)
chr7 (162-260)||(48013593-48013690)
chr7 (197-259)||(12670928-12670988)
chr7 (103-260)||(16833786-16833944)
chr7 (287-337)||(28074103-28074153)
chr7 (103-260)||(40196530-40196685)
chr7 (105-172)||(1051675-1051742)
chr7 (105-172)||(4833531-4833598)
chr7 (103-174)||(47390853-47390924)
chr7 (170-260)||(8122235-8122327)
chr7 (106-200)||(31571619-31571713)
chr7 (105-199)||(33519048-33519142)
chr7 (105-195)||(37925841-37925931)
chr7 (292-337)||(25887192-25887237)
chr7 (288-337)||(36267748-36267797)
chr7 (105-186)||(47391019-47391100)
chr7 (100-172)||(18231763-18231835)
chr7 (103-175)||(33655282-33655354)
chr7 (293-337)||(37925841-37925885)
chr7 (293-337)||(39856065-39856109)
chr7 (105-172)||(36267730-36267797)
chr7 (294-337)||(47391057-47391100)
chr7 (287-337)||(39646469-39646519)
chr7 (101-171)||(40282193-40282263)
chr7 (108-194)||(42306485-42306571)
chr7 (292-337)||(1051697-1051742)
chr7 (292-337)||(13770948-13770993)
chr7 (292-337)||(34228518-34228563)
chr7 (172-239)||(7791831-7791896)
chr7 (103-187)||(13770946-13771030)
chr7 (293-337)||(33519248-33519292)
chr7 (293-337)||(36267553-36267597)
chr7 (105-172)||(13425120-13425187)
chr7 (105-140)||(17853069-17853104)
chr7 (103-170)||(25887190-25887257)
chr7 (101-172)||(34228496-34228567)
chr7 (288-335)||(37926036-37926083)
chr7 (105-195)||(13771100-13771190)
chr7 (101-195)||(18795749-18795842)
chr7 (294-336)||(31571671-31571713)
chr7 (295-337)||(41496957-41496999)
chr7 (295-337)||(48881558-48881600)
chr7 (105-194)||(10315788-10315877)
chr7 (219-260)||(18063673-18063714)
chr7 (292-337)||(18231785-18231830)
chr7 (218-259)||(20393693-20393734)
chr7 (290-335)||(23116425-23116470)
chr7 (219-260)||(33655220-33655261)
chr7 (102-195)||(37620771-37620864)
chr7 (294-335)||(37620776-37620817)
chr7 (294-331)||(41008188-41008225)
chr7 (140-260)||(48093984-48094102)
chr7 (293-337)||(4833531-4833575)
chr7 (291-335)||(18127433-18127476)
chr7 (293-337)||(28074308-28074352)
chr7 (298-334)||(31364249-31364285)
chr7 (293-337)||(40282197-40282241)
chr7 (293-337)||(47390855-47390899)
[»] chr5 (69 HSPs)
chr5 (103-260)||(33744191-33744346)
chr5 (93-260)||(34980901-34981066)
chr5 (102-260)||(40305667-40305818)
chr5 (108-260)||(21581038-21581188)
chr5 (101-260)||(15986620-15986777)
chr5 (102-260)||(10204667-10204823)
chr5 (105-259)||(12035936-12036087)
chr5 (160-260)||(10043343-10043441)
chr5 (150-237)||(6597835-6597920)
chr5 (175-260)||(8551488-8551571)
chr5 (107-194)||(1657968-1658055)
chr5 (103-260)||(10043008-10043162)
chr5 (101-178)||(14245217-14245294)
chr5 (103-219)||(2183944-2184060)
chr5 (160-259)||(6382419-6382516)
chr5 (102-260)||(28279473-28279629)
chr5 (105-199)||(14245088-14245182)
chr5 (103-177)||(16938477-16938551)
chr5 (105-170)||(13634711-13634776)
chr5 (107-194)||(7544291-7544378)
chr5 (105-183)||(11436939-11437017)
chr5 (292-337)||(14245088-14245133)
chr5 (99-140)||(22023568-22023609)
chr5 (105-169)||(10476026-10476090)
chr5 (103-147)||(10476230-10476274)
chr5 (293-337)||(13634711-13634755)
chr5 (106-194)||(13634866-13634954)
chr5 (293-337)||(14245246-14245290)
chr5 (293-337)||(16938479-16938523)
chr5 (105-177)||(26414893-26414965)
chr5 (109-168)||(2550533-2550592)
chr5 (190-260)||(5688504-5688572)
chr5 (293-336)||(13634911-13634954)
chr5 (292-335)||(42681450-42681493)
chr5 (108-178)||(11757074-11757144)
chr5 (297-335)||(34980812-34980850)
chr5 (292-337)||(5688589-5688634)
chr5 (293-334)||(11757103-11757144)
chr5 (105-194)||(16938634-16938723)
chr5 (103-193)||(35176815-35176907)
chr5 (288-337)||(40305860-40305909)
chr5 (293-333)||(2550552-2550592)
chr5 (105-177)||(7544136-7544208)
chr5 (293-337)||(7544136-7544180)
chr5 (287-335)||(8551612-8551660)
chr5 (160-242)||(13839783-13839863)
chr5 (297-337)||(20147074-20147114)
chr5 (293-337)||(26414893-26414937)
chr5 (294-337)||(10476229-10476272)
chr5 (290-337)||(12035936-12035983)
chr5 (290-337)||(15986624-15986671)
chr5 (290-337)||(34981007-34981054)
chr5 (102-169)||(37551585-37551652)
chr5 (102-169)||(37654415-37654482)
chr5 (293-335)||(1658013-1658055)
chr5 (101-147)||(5688592-5688638)
chr5 (287-337)||(10043252-10043302)
chr5 (287-337)||(10204576-10204626)
chr5 (299-337)||(13298271-13298309)
chr5 (287-337)||(15986818-15986868)
chr5 (103-145)||(20409663-20409705)
chr5 (110-188)||(36363193-36363271)
chr5 (300-337)||(40815297-40815334)
chr5 (293-337)||(11436939-11436983)
chr5 (294-334)||(12600703-12600743)
chr5 (99-147)||(15858942-15858990)
chr5 (105-145)||(20147074-20147114)
chr5 (140-200)||(29002241-29002301)
chr5 (297-337)||(40305670-40305710)
[»] chr2 (63 HSPs)
chr2 (103-260)||(45257398-45257553)
chr2 (111-260)||(31061450-31061598)
chr2 (105-259)||(42813712-42813864)
chr2 (161-260)||(15085756-15085853)
chr2 (103-218)||(22356134-22356250)
chr2 (161-260)||(33265697-33265794)
chr2 (122-259)||(1052771-1052907)
chr2 (163-260)||(45098260-45098355)
chr2 (167-260)||(34187666-34187759)
chr2 (162-260)||(35325360-35325456)
chr2 (101-260)||(2380988-2381140)
chr2 (182-259)||(31928121-31928196)
chr2 (160-248)||(3094408-3094494)
chr2 (118-255)||(9313079-9313219)
chr2 (160-249)||(8554354-8554441)
chr2 (160-260)||(21502124-21502222)
chr2 (108-260)||(31795772-31795922)
chr2 (160-260)||(42296358-42296456)
chr2 (163-250)||(36052145-36052230)
chr2 (103-217)||(16713657-16713771)
chr2 (288-337)||(8554446-8554495)
chr2 (105-260)||(23748186-23748339)
chr2 (106-194)||(36046205-36046293)
chr2 (105-172)||(15224871-15224938)
chr2 (103-170)||(35736173-35736240)
chr2 (103-177)||(36347713-36347787)
chr2 (105-195)||(41778773-41778863)
chr2 (101-153)||(17379842-17379894)
chr2 (293-337)||(17379846-17379890)
chr2 (293-337)||(35736175-35736219)
chr2 (107-194)||(8426881-8426968)
chr2 (287-337)||(31061359-31061409)
chr2 (293-335)||(36046401-36046443)
chr2 (105-178)||(17380012-17380085)
chr2 (107-168)||(35531837-35531898)
chr2 (293-337)||(22356204-22356248)
chr2 (293-337)||(23748295-23748339)
chr2 (297-337)||(31795968-31796008)
chr2 (100-233)||(17331410-17331535)
chr2 (294-337)||(36347742-36347785)
chr2 (302-337)||(39732937-39732972)
chr2 (293-335)||(9426987-9427029)
chr2 (287-337)||(17334006-17334056)
chr2 (295-337)||(17380043-17380085)
chr2 (287-337)||(35736381-35736431)
chr2 (105-147)||(35736389-35736431)
chr2 (106-140)||(39821868-39821902)
chr2 (287-337)||(45257307-45257357)
chr2 (105-178)||(9631731-9631804)
chr2 (102-147)||(15224142-15224187)
chr2 (102-147)||(17334014-17334059)
chr2 (103-144)||(21662415-21662456)
chr2 (103-140)||(23748103-23748140)
chr2 (103-140)||(34187778-34187815)
chr2 (107-200)||(40022522-40022615)
chr2 (219-260)||(41778864-41778905)
chr2 (103-172)||(42296480-42296549)
chr2 (109-177)||(2241590-2241658)
chr2 (287-335)||(3094547-3094595)
chr2 (295-335)||(16713494-16713534)
chr2 (290-334)||(31795772-31795816)
chr2 (293-337)||(41778773-41778817)
chr2 (293-337)||(42296503-42296547)
[»] chr6 (51 HSPs)
chr6 (108-260)||(26318396-26318546)
chr6 (101-259)||(9051530-9051686)
chr6 (99-260)||(3841176-3841336)
chr6 (105-260)||(4097235-4097388)
chr6 (150-247)||(31799025-31799120)
chr6 (168-259)||(15353456-15353544)
chr6 (121-247)||(34176587-34176711)
chr6 (151-260)||(25468445-25468552)
chr6 (168-260)||(15323316-15323406)
chr6 (174-247)||(15373668-15373739)
chr6 (113-245)||(10293354-10293484)
chr6 (106-260)||(16737997-16738149)
chr6 (105-184)||(10818229-10818308)
chr6 (100-198)||(14515623-14515720)
chr6 (105-177)||(14515473-14515545)
chr6 (287-337)||(23090995-23091045)
chr6 (105-178)||(9721138-9721211)
chr6 (106-242)||(10818325-10818459)
chr6 (293-337)||(9721138-9721182)
chr6 (295-337)||(9051734-9051776)
chr6 (108-178)||(9719034-9719104)
chr6 (113-186)||(23091121-23091195)
chr6 (108-177)||(19278210-19278278)
chr6 (293-337)||(14515473-14515517)
chr6 (105-188)||(665841-665923)
chr6 (102-200)||(9298635-9298738)
chr6 (105-152)||(30487306-30487353)
chr6 (292-334)||(9719034-9719076)
chr6 (295-337)||(10818229-10818271)
chr6 (152-260)||(29692969-29693083)
chr6 (103-184)||(4097678-4097759)
chr6 (297-334)||(4097717-4097754)
chr6 (293-334)||(31849113-31849154)
chr6 (103-199)||(15353362-15353458)
chr6 (293-337)||(30487306-30487350)
chr6 (101-140)||(1300625-1300664)
chr6 (100-171)||(9721315-9721386)
chr6 (298-337)||(15323225-15323264)
chr6 (298-337)||(15353364-15353403)
chr6 (105-140)||(21606854-21606889)
chr6 (152-255)||(28477076-28477186)
chr6 (102-172)||(12811157-12811227)
chr6 (110-200)||(19278039-19278128)
chr6 (105-142)||(4097443-4097480)
chr6 (106-171)||(9719208-9719273)
chr6 (103-144)||(15323223-15323264)
chr6 (293-334)||(19278237-19278278)
chr6 (296-336)||(9719233-9719273)
chr6 (293-337)||(12811180-12811224)
chr6 (287-335)||(25468585-25468633)
chr6 (219-259)||(32926737-32926777)
[»] chr4 (80 HSPs)
chr4 (108-260)||(4437428-4437578)
chr4 (100-258)||(37761557-37761713)
chr4 (107-259)||(54576329-54576479)
chr4 (141-260)||(43961501-43961618)
chr4 (160-260)||(22186810-22186908)
chr4 (140-260)||(17182518-17182638)
chr4 (140-260)||(47846090-47846208)
chr4 (130-256)||(7977520-7977645)
chr4 (102-260)||(34995142-34995296)
chr4 (105-234)||(5825013-5825140)
chr4 (107-258)||(21694890-21695040)
chr4 (108-260)||(29993774-29993924)
chr4 (160-260)||(55080670-55080768)
chr4 (100-188)||(54935230-54935318)
chr4 (160-248)||(11089619-11089705)
chr4 (161-260)||(14539363-14539460)
chr4 (103-187)||(37711285-37711369)
chr4 (161-260)||(51329887-51329983)
chr4 (161-250)||(54001162-54001246)
chr4 (113-259)||(17938115-17938259)
chr4 (107-260)||(27735836-27735987)
chr4 (105-194)||(41174500-41174589)
chr4 (140-240)||(44145842-44145940)
chr4 (175-258)||(9030309-9030390)
chr4 (103-260)||(5730828-5730983)
chr4 (287-337)||(44145773-44145823)
chr4 (105-195)||(56135749-56135839)
chr4 (102-171)||(46007879-46007948)
chr4 (140-260)||(47433743-47433861)
chr4 (103-177)||(45132667-45132741)
chr4 (105-194)||(6938402-6938491)
chr4 (103-172)||(26166935-26167004)
chr4 (105-170)||(31348500-31348565)
chr4 (100-260)||(45741981-45742139)
chr4 (105-178)||(49735468-49735541)
chr4 (219-260)||(56135840-56135881)
chr4 (125-260)||(6891451-6891584)
chr4 (293-337)||(49735468-49735512)
chr4 (293-337)||(49735692-49735736)
chr4 (293-337)||(54320634-54320678)
chr4 (105-172)||(54935067-54935135)
chr4 (293-337)||(56135749-56135793)
chr4 (103-154)||(49735687-49735738)
chr4 (103-178)||(54320605-54320680)
chr4 (108-166)||(5731014-5731072)
chr4 (102-172)||(47433886-47433956)
chr4 (152-209)||(35543354-35543411)
chr4 (293-334)||(46007901-46007942)
chr4 (105-146)||(53260718-53260759)
chr4 (296-337)||(54935067-54935108)
chr4 (103-140)||(56135930-56135967)
chr4 (105-177)||(1968531-1968603)
chr4 (297-337)||(1968563-1968603)
chr4 (293-337)||(6938447-6938491)
chr4 (293-337)||(7977697-7977741)
chr4 (103-194)||(31348314-31348410)
chr4 (293-337)||(31348521-31348565)
chr4 (113-260)||(35248777-35248922)
chr4 (293-337)||(37711138-37711182)
chr4 (293-337)||(37711323-37711367)
chr4 (178-233)||(51075215-51075268)
chr4 (293-337)||(54935269-54935313)
chr4 (290-337)||(17182682-17182729)
chr4 (105-184)||(21695053-21695132)
chr4 (294-337)||(26166937-26166980)
chr4 (162-260)||(55510261-55510356)
chr4 (109-195)||(27735749-27735835)
chr4 (295-337)||(41174547-41174589)
chr4 (107-201)||(47846204-47846298)
chr4 (293-335)||(47846256-47846298)
chr4 (105-177)||(37711138-37711215)
chr4 (219-260)||(37711234-37711275)
chr4 (120-169)||(49735648-49735696)
chr4 (296-337)||(53260718-53260759)
chr4 (305-337)||(4437626-4437658)
chr4 (294-334)||(5731032-5731072)
chr4 (293-337)||(37761664-37761708)
chr4 (293-337)||(47433909-47433953)
chr4 (107-195)||(47846417-47846505)
chr4 (297-337)||(54320435-54320475)
[»] scaffold0012 (2 HSPs)
scaffold0012 (109-259)||(184698-184847)
scaffold0012 (102-140)||(184608-184646)
[»] chr1 (65 HSPs)
chr1 (109-239)||(35512909-35513037)
chr1 (105-260)||(1085489-1085643)
chr1 (113-260)||(25268355-25268500)
chr1 (105-259)||(20607311-20607461)
chr1 (105-260)||(51303384-51303537)
chr1 (103-260)||(35927904-35928058)
chr1 (160-260)||(33643359-33643457)
chr1 (160-260)||(47071142-47071240)
chr1 (107-260)||(2506630-2506781)
chr1 (150-259)||(13386964-13387071)
chr1 (103-260)||(40709290-40709445)
chr1 (140-260)||(1344639-1344757)
chr1 (101-260)||(40094929-40095086)
chr1 (159-259)||(40287310-40287407)
chr1 (107-178)||(12234181-12234252)
chr1 (160-260)||(525156-525252)
chr1 (105-260)||(30010423-30010576)
chr1 (102-177)||(30010329-30010404)
chr1 (290-337)||(40709292-40709339)
chr1 (292-337)||(30010332-30010377)
chr1 (103-188)||(38509892-38509977)
chr1 (105-174)||(41498404-41498473)
chr1 (103-195)||(2470728-2470820)
chr1 (104-172)||(2858931-2858999)
chr1 (105-177)||(12234010-12234082)
chr1 (293-337)||(26324014-26324058)
chr1 (102-145)||(20607220-20607263)
chr1 (197-258)||(17622630-17622689)
chr1 (287-337)||(33643268-33643318)
chr1 (105-178)||(35349466-35349537)
chr1 (103-177)||(35349634-35349708)
chr1 (103-188)||(41498565-41498651)
chr1 (105-219)||(47261401-47261515)
chr1 (287-337)||(51303384-51303434)
chr1 (293-330)||(2859132-2859169)
chr1 (108-169)||(38510074-38510135)
chr1 (219-260)||(50079496-50079537)
chr1 (160-260)||(52707736-52707834)
chr1 (109-259)||(8529891-8530039)
chr1 (297-337)||(12234010-12234050)
chr1 (102-178)||(20576130-20576206)
chr1 (293-337)||(20607417-20607461)
chr1 (293-337)||(35349662-35349706)
chr1 (293-337)||(41498404-41498448)
chr1 (140-171)||(49832722-49832753)
chr1 (287-337)||(1085684-1085734)
chr1 (108-194)||(7444650-7444736)
chr1 (293-335)||(12234210-12234252)
chr1 (105-147)||(26324014-26324056)
chr1 (103-177)||(32951490-32951564)
chr1 (287-337)||(35927814-35927864)
chr1 (103-144)||(1085695-1085736)
chr1 (124-177)||(2859104-2859157)
chr1 (103-172)||(28770898-28770967)
chr1 (293-334)||(38510094-38510135)
chr1 (141-260)||(44210943-44211058)
chr1 (293-337)||(2858932-2858976)
chr1 (103-139)||(10392078-10392114)
chr1 (294-334)||(20576136-20576176)
chr1 (297-337)||(20607223-20607263)
chr1 (293-337)||(30010532-30010576)
chr1 (109-141)||(35512638-35512670)
chr1 (293-333)||(35512997-35513037)
chr1 (293-337)||(38509894-38509938)
chr1 (293-337)||(40094933-40094977)
[»] scaffold0007 (1 HSPs)
scaffold0007 (104-260)||(242307-242461)
[»] scaffold0240 (1 HSPs)
scaffold0240 (105-250)||(17641-17782)
[»] scaffold0071 (1 HSPs)
scaffold0071 (160-259)||(52977-53074)
[»] scaffold0095 (1 HSPs)
scaffold0095 (135-257)||(8241-8361)
[»] scaffold0026 (4 HSPs)
scaffold0026 (160-259)||(1452-1549)
scaffold0026 (108-177)||(1175-1244)
scaffold0026 (294-334)||(1175-1215)
scaffold0026 (105-193)||(1554-1642)
[»] scaffold0119 (1 HSPs)
scaffold0119 (160-260)||(37474-37572)
[»] scaffold0067 (3 HSPs)
scaffold0067 (103-240)||(39184-39320)
scaffold0067 (105-177)||(39362-39434)
scaffold0067 (293-337)||(39390-39434)
[»] scaffold0262 (1 HSPs)
scaffold0262 (105-188)||(16296-16379)
[»] scaffold1414 (1 HSPs)
scaffold1414 (178-250)||(402-473)
[»] scaffold0198 (2 HSPs)
scaffold0198 (108-193)||(3150-3235)
scaffold0198 (294-334)||(3150-3190)
[»] scaffold0096 (2 HSPs)
scaffold0096 (103-172)||(6582-6651)
scaffold0096 (293-337)||(6584-6628)
[»] scaffold0006 (1 HSPs)
scaffold0006 (197-260)||(81503-81564)


Alignment Details
Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 260
Target Start/End: Complemental strand, 42772370 - 42772123
Alignment:
Q  1 ttctttaacgttcttagagttttcttcttccgctttctcaccttcaacaactgaatcttctcaaagaattcaccttcagccacagaagcttcttgaacat 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42772370 ttctttaacgttcttagagttttcttcttccgctttcccaccttcaacaactgaatcttctcaaagaattcaccttcagccacagaagcttcttgaacat 42772271  T
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||||||||||||||||||||||||||          ||||||||||| ||| ||| || |||||| |||||||||||||||||||||||||||    
T  42772270 tcttagggtgtgtttgaatggagggtttaggag----------gggaaggtttactttgcttcttaaaattacggacattataaaatgattttttgaaaa 42772181  T
Q  201 ttgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  42772180 ttgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 42772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 105 - 260
Target Start/End: Complemental strand, 34641234 - 34641083
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||||||||||||| ||||||||||||||||  ||| |||||||||    
T  34641234 agggtgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacggacattataaaatga--tttagaaaattga 34641137  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  34641136 attaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 34641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 26136039 - 26135888
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 206  Q
    |||||| |||||||||||||||||||||||| ||||| ||| |||||| ||| ||||||||||||| |||||||||||||| ||||||||||||||||||    
T  26136039 ggtgtgattgaatggagggtttaggaggggaagggagtggagggtttacttttcttttttaaattacggacattataaaataattttttgaaaattgaat 26135940  T
Q  207 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||| |||  |||||| || |||||||||||||||||||||| |||||||||    
T  26135939 taacaatatg--ataaataattatataatacttcaaaaacacttaatttatttt 26135888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 24253968 - 24253813
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| ||||||||||||| |||||| ||||||| | | |||| ||| ||||||||||||| |||||||||||||||| |||| |||| ||    
T  24253968 ttagggtgtgtttggatggagggtttagaaggggaagggagggaaggatttacttttcttttttaaattacggacattataaaatgagttttagaaagtt 24253869  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||||    
T  24253868 gaattaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatttt 24253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 40858774 - 40858656
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    |||||||| |||||| ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||||    
T  40858774 ggaggggagggtttagttttcttttttaaattacggacattataaaatgatcttttgaaaattgaattaacaacatg--ataaatgatcatataatactt 40858677  T
Q  240 caaaaacacttcatttatttt 260  Q
    ||||||||||  |||||||||    
T  40858676 caaaaacactaaatttatttt 40858656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 111 - 260
Target Start/End: Original strand, 10943620 - 10943767
Alignment:
Q  111 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaac 210  Q
    |||||| |||||||||||| |||||||  ||||| |||| |||| ||| |||||||||||||| || ||||||||||||||||| |||||||||||||||    
T  10943620 tgtttggatggagggtttaagaggggaaaggaggagaagatttaattttcttttttaaattatagatattataaaatgatttttagaaaattgaattaac 10943719  T
Q  211 aacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||   |||||| || |||||||||||||||||||||| |||||||||    
T  10943720 aacat--aataaataattatataatacttcaaaaacacttaatttatttt 10943767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 17474209 - 17474359
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| || ||||||||||||||| | |  | || || ||||| ||| ||||||||||||| |||||||||||||| ||||||| |||||||||||    
T  17474209 gtgtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacggacattataaaataattttttaaaaattgaatt 17474308  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||| |||  |||||| |||| |||||||||||||||||||| |||||||||    
T  17474309 aacaatatg--ataaataatcaaataatacttcaaaaacacttaatttatttt 17474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 155 - 260
Target Start/End: Complemental strand, 41414272 - 41414169
Alignment:
Q  155 ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatt 254  Q
    ||||| |||||||||| | ||||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||||||||||||||| ||| |||    
T  41414272 ttttctttttttaaatcagggacattataaaatgatttttagaaaattgagttaacaacatg--ataaatgatcatataatacttcaaaaacgcttgatt 41414175  T
Q  255 tatttt 260  Q
    ||||||    
T  41414174 tatttt 41414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 44412603 - 44412452
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 206  Q
    |||||||||| || || |||||  ||||||| ||||||||| |  | | |||  |||||||||||| | ||| | |||||||||||||||||||||||||    
T  44412603 ggtgtgtttggattgatggtttgtgaggggaagggaggggaggactcacttttattttttaaattacgaacaatgtaaaatgattttttgaaaattgaat 44412504  T
Q  207 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  44412503 taacaacatg--ataaatcatcatataatacttcaaaaacacttaatttatttt 44412452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 55428619 - 55428492
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 208  Q
    |||||||| || ||||||||||||||||| ||||||||| | |||| ||| ||| ||||||||| |||||||| || ||||||||| |||||||||||||    
T  55428619 tgtgtttggattgagggtttaggaggggaagggaggggatgatttacttttcttctttaaattacggacattacaagatgatttttagaaaattgaatta 55428520  T
Q  209 acaacatgatataaatgatcatataatact 238  Q
    ||||| ||  ||||||||||||||||||||    
T  55428519 acaacgtg--ataaatgatcatataatact 55428492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 105 - 260
Target Start/End: Original strand, 8432261 - 8432412
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    ||||||||||||||||||||||||| ||||||| | ||||||| |  ||| |||  |||||| |||||  ||||||||||||||||||||  ||||||||    
T  8432261 agggtgtgtttgaatggagggtttacgaggggaagagaggggaggacttacttt--tttttttaattacagacattataaaatgatttttacaaaattga 8432358  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||  |||||| ||  ||||||||||||||||||||| ||| |||||    
T  8432359 attaacaacatg--ataaataattttataatacttcaaaaacacttaattcatttt 8432412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 48683823 - 48683703
Alignment:
Q  140 ggaggggaaggtttattttc-cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatact 238  Q
    |||||||| ||||||||||  ||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||   |||||||||||||||||| |    
T  48683823 ggaggggagggtttattttttcttttttaaattacgaacattataaaatgatttttaggaaattgaattaacaacat-tgataaatgatcatataatatt 48683725  T
Q  239 tcaaaaacacttcatttatttt 260  Q
    |||||||||||| |||||||||    
T  48683724 tcaaaaacacttaatttatttt 48683703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 18086035 - 18086133
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||  |||||||||||||| ||||| |||||||||||||||||||| ||| ||||||||||| |||||||||||||||||| ||||||||    
T  18086035 cttttttaaattacagacattataaaatgttttttagaaaattgaattaacaacataata-aaatgatcataaaatacttcaaaaacacttaatttattt 18086133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 42699669 - 42699765
Alignment:
Q  162 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||||||||||| | |||| ||||||||||||| ||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  42699669 tttttaaattatggacattataaaataaattttagaaaattgaattatcaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 42699765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 260
Target Start/End: Original strand, 21090129 - 21090224
Alignment:
Q  163 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||  || ||||||||| |||||||||||||||||||||||||||||||||  || ||||||||||||||||||||||||| |||||||||    
T  21090129 ttttaaattacagatattataaaacgattttttgaaaattgaattaacaacatgatat--attatcatataatacttcaaaaacacttaatttatttt 21090224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 287 - 335
Target Start/End: Complemental strand, 42772094 - 42772046
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  42772094 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 42772046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 162 - 245
Target Start/End: Original strand, 54985750 - 54985838
Alignment:
Q  162 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatata-----aatgatcatataatacttcaaaaa 245  Q
    ||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||||| |     ||||||||||||||||||||||||    
T  54985750 tttttaaattacggacattataaattgatttttagaaaattgaattaacaatatgataaatgaataatgatcatataatacttcaaaaa 54985838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 36727362 - 36727268
Alignment:
Q  163 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||| | |||||||||||| |||||  ||||||| | |||||||||||  |||||| ||||||||||||||||||||||||| |||||||||    
T  36727362 ttttaaattacgaacattataaaataattttaagaaaattaacttaacaacatg--ataaattatcatataatacttcaaaaacactt-atttatttt 36727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 106
Target Start/End: Original strand, 42772928 - 42773016
Alignment:
Q  18 agttttcttcttccgctttctcaccttcaacaactgaatcttctcaaagaattcaccttcagccacagaagcttcttgaacattcttag 106  Q
    ||||||||||| ||||||| |||||||||||||| ||| ||||||  | | |||||||||||||||| ||||||||||||  |||||||    
T  42772928 agttttcttctcccgctttgtcaccttcaacaacagaaccttctcggatatttcaccttcagccacaaaagcttcttgaatgttcttag 42773016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 18654598 - 18654753
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa-aat 201  Q
    |||||||||||||| |||||||||||||||||| | | || |||| ||||||  || | ||||||||||| ||||  |||||||| |||||||||| | |    
T  18654598 ttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaat-attttttgaagagt 18654696  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    | |  ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||||    
T  18654697 taacatattaacatg--ataaatgatcatataatacttcaattacacttaatttatttt 18654753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 46978594 - 46978518
Alignment:
Q  182 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||  |||||| ||||||||||||||||  |||||| ||||||||||||||||||| || |||||||||    
T  46978594 taaaatgatttttataaaatttaattaacaacatgata--aatgattatataatacttcaaaaacatttaatttatttt 46978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 177
Target Start/End: Original strand, 24560212 - 24560289
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||| |||||||||||| ||  |||||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||||    
T  24560212 ttctaagggtgtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 24560289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 16884064 - 16884124
Alignment:
Q  197 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||| ||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  16884064 aaaattgaat-aacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 16884124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 101 - 260
Target Start/End: Complemental strand, 24560465 - 24560308
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||||||||| ||||||||||||||||||||  ||| ||||  ||||| ||| | |||||||||||  |||| ||| ||||| |||||  |||     
T  24560465 tcttagggtgtgtttggatggagggtttaggaggggaacggatgggagagtttacttttcatttttaaattaccgacactatgaaatgttttttaaaaag 24560366  T
Q  201 ttgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    || |  ||  ||||||  ||||| ||||||||||||||||||  ||| || |||||||||    
T  24560365 ttaacatattaacatg--ataaacgatcatataatacttcaatcacatttaatttatttt 24560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 107 - 187
Target Start/End: Original strand, 41110323 - 41110403
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 187  Q
    |||||||||| ||||||| |||||||||||| |||||| ||||||||| ||| | ||||||||||| ||||| ||| ||||    
T  41110323 ggtgtgtttggatggaggatttaggaggggaagggaggagaaggtttacttttcatttttaaattacggacactatgaaat 41110403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 140
Target Start/End: Original strand, 30200090 - 30200133
Alignment:
Q  97 acattcttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  30200090 acattcttagggtgtgtttggatggagggtttaggaggggaggg 30200133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 28582755 - 28582681
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||| |  |||| |||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||    
T  28582755 ttagggtgtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 28582681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 44412555 - 44412603
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||||||||||||||||||||||||  ||||| ||||||||||||||||    
T  44412555 gtgagtcctcccctcccttcccctcacaaaccatcaatccaaacacacc 44412603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Original strand, 27197734 - 27197802
Alignment:
Q  190 ttttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||| |||||||||||||||||||||  ||| ||||||||||||||||| ||| | |||| |||||||||    
T  27197734 tttttagaaaattgaattaacaacatg--atagatgatcatataatactttaaatatacttaatttatttt 27197802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 165
Target Start/End: Original strand, 36568901 - 36568964
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttt 165  Q
    ||||||||||||||| |||||||||||||||| |||  ||||||||  |||||||||| |||||    
T  36568901 cttagggtgtgtttggatggagggtttaggagtggaatggaggggagagtttattttcattttt 36568964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 42770216 - 42770169
Alignment:
Q  1 ttctttaacgttcttagagttttcttcttccgctttctcaccttcaac 48  Q
    ||||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  42770216 ttcttgaacgttcctagagttttcttcttcctctttctcaccttcaac 42770169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 242
Target Start/End: Original strand, 45663220 - 45663279
Alignment:
Q  180 tataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaa 242  Q
    |||||||| ||||||||||||||||| ||||||||||  |||||||||| |||||||||||||    
T  45663220 tataaaat-attttttgaaaattgaaataacaacatg--ataaatgatcttataatacttcaa 45663279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 220643 - 220569
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    ||||||| |||||| ||||||||||||||||| || |||||||||   |||| ||| ||||||||||||| ||||    
T  220643 ttagggtctgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggac 220569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 18654842 - 18654784
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttcctttttt 166  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||| |||| |||||||    
T  18654842 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttt 18654784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 255
Target Start/End: Complemental strand, 37807321 - 37807176
Alignment:
Q  109 tgtgtttgaatggagggtttagga-ggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat- 206  Q
    |||||||||||||||||||||||| ||||| | ||||  || ||||| ||| | |||||||||| |||||| ||| ||||| |||||| |||| | |||     
T  37807321 tgtgtttgaatggagggtttaggagggggaagagaggacaatgtttacttttcgtttttaaattttggacactatgaaatg-ttttttaaaaagttaata 37807223  T
Q  207 taacaacatgatataaatgatcatataatacttcaaaaacacttcattt 255  Q
    ||  ||||||  ||||| ||||||||||||||||||  |||||| ||||    
T  37807222 tattaacatg--ataaacgatcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Complemental strand, 44412410 - 44412361
Alignment:
Q  288 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| ||||||||| |||||| ||||| ||||||||||||    
T  44412410 tgagtcctcccctctcttcccctcctaaaccctcaattcaaacacaccct 44412361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 5903593 - 5903549
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||| ||||||||||||||| | ||||||||||||||||||    
T  5903593 cctcccctgccttcccctcttaaatcctcaatccaaacacaccct 5903549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 24560261 - 24560217
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||    
T  24560261 cctcccctcccttcccctcctaaacccttaatccaaacacaccct 24560217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 25655172 - 25655216
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||||| |||| ||||||||||||||||||    
T  25655172 cctcccctcccttctcctcttcaaccctcaatccaaacacaccct 25655216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 172
Target Start/End: Original strand, 28581189 - 28581253
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    ||||||||| ||||||||||||| || ||| ||||||||| |||||| ||| | |||||||||||    
T  28581189 gtgtgtttggatggagggtttagaagaggaagggaggggagggtttagttttcatttttaaatta 28581253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Complemental strand, 31664427 - 31664391
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacaca 333  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31664427 ccctcccttcccctcttaaaccctcaatccaaacaca 31664391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 333
Target Start/End: Original strand, 31931969 - 31932005
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacaca 333  Q
    |||||||||||||||||||||| ||||||||||||||    
T  31931969 ccctcccttcccctcttaaaccctcaatccaaacaca 31932005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 34641190 - 34641234
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  34641190 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 34641234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 41110565 - 41110493
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || ||||||||  ||||||| ||||| |||||||||| ||| | ||||||||||| ||||    
T  41110565 agggtgtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggac 41110493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 287 - 334
Target Start/End: Original strand, 21090265 - 21090312
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||| |||||||||| ||| |||||| |||||||||||||||    
T  21090265 gtgagtcctctcctcccttcctctcctaaaccatcaatccaaacacac 21090312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 37102159 - 37102194
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||| |||||||||||||||||||||||    
T  37102159 agggtgtgtttggatggagggtttaggaggggaggg 37102194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 651971 - 651929
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    ||||||||||||||  |||||||||||||| ||||||||||||    
T  651971 ttagggtgtgtttgggtggagggtttaggaagggaggggaggg 651929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Complemental strand, 21774019 - 21773981
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    ||||||||||||||| ||| |||||||||||||||||||    
T  21774019 cttagggtgtgtttggatgaagggtttaggaggggaggg 21773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 27197843 - 27197893
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||  || ||||| |||||||||||||||| ||||||||||||    
T  27197843 gtgagtcctcctttctcttcctctcttaaaccttcaattcaaacacaccct 27197893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 40858798 - 40858764
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    ||||||||||| |||||||||||||||||||||||    
T  40858798 gggtgtgtttggatggagggtttaggaggggaggg 40858764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 45
Target Start/End: Original strand, 42772820 - 42772858
Alignment:
Q  7 aacgttcttagagttttcttcttccgctttctcaccttc 45  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  42772820 aacgttcttagagttttcttcttcccctttctcgccttc 42772858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 44412361 - 44412403
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    ||||||||||||||| ||||||||||||||||| | |||||||    
T  44412361 agggtgtgtttgaattgagggtttaggaggggaagagagggga 44412403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 55428581 - 55428619
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacaca 333  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  55428581 tcccctcccttcccctcctaaaccctcaatccaaacaca 55428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 21773819 - 21773782
Alignment:
Q  300 tcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  21773819 tcccttcccctcctaaaccttcaatccaaacataccct 21773782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 24253762 - 24253721
Alignment:
Q  296 cccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||| ||||| |||||| ||||||||||||||||||    
T  24253762 cccctccctttccctcctaaaccctcaatccaaacacaccct 24253721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 30200320 - 30200263
Alignment:
Q  120 ggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    ||||||| |||||||||| ||||||| | |||||| ||| ||||||||||||| ||||    
T  30200320 ggagggtataggaggggaagggagggaagggtttacttttcttttttaaattacggac 30200263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 34641000 - 34641037
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||| || ||||||||||||||||||||    
T  34641000 ttagggtgtgtttggattgagggtttaggaggggaggg 34641037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 48683850 - 48683813
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||| || ||||||||||||||||||||    
T  48683850 ttagggtgtgtttggatagagggtttaggaggggaggg 48683813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 54996792 - 54996833
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||||||  |||||||||| |||||    
T  54996792 ataaatgatcatataatacttcaatcacacttcattcatttt 54996833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 6803406 - 6803442
Alignment:
Q  298 cctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||| ||||||||| ||||||||||||||||||||||    
T  6803406 cctctcttcccctcctaaaccttcaatccaaacacac 6803442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 9312516 - 9312476
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| ||||||| |||||||||||| |||||    
T  9312516 ccctcccttcccctattaaaccctcaatccaaacataccct 9312476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 9312713 - 9312673
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    |||| ||||||| || |||||||||||||||||||||||||    
T  9312713 agggagtgtttggattgagggtttaggaggggaggggaggg 9312673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 18654802 - 18654842
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||| |||||| ||||| |||||||||    
T  18654802 ctcccctcccttcccctcctaaaccctcaattcaaacacac 18654842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 28582709 - 28582753
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||| | ||| ||||||||||||||    
T  28582709 cctcccctcccttcccctcctaaatcctcagtccaaacacaccct 28582753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 42770709 - 42770752
Alignment:
Q  4 tttaacgttcttagagttttcttcttccgctttctcaccttcaac 48  Q
    |||||| ||||||||| |||||||| |||||||||||||||||||    
T  42770709 tttaacattcttagagctttcttct-ccgctttctcaccttcaac 42770752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 42772044 - 42772012
Alignment:
Q  14 ttagagttttcttcttccgctttctcaccttca 46  Q
    |||||||||||| ||||||||||||||||||||    
T  42772044 ttagagttttctgcttccgctttctcaccttca 42772012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 46205017 - 46204977
Alignment:
Q  220 taaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||||||||  |||||| |||||||||    
T  46205017 taaatgatcatataatacttcaatcacacttaatttatttt 46204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 115; Significance: 2e-58; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 43732933 - 43732778
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  43732933 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgattttttgaaaatt 43732834  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  43732833 gaattaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 43732778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 101 - 260
Target Start/End: Original strand, 12022138 - 12022296
Alignment:
Q  101 tcttagggtgtgtttgaatggagggttt-aggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    |||||||||||||| | ||||||||||| || |||||| ||||||||| || ||| ||| ||||||||||||| | ||||||||||||||||||| ||||    
T  12022138 tcttagggtgtgttaggatggagggtttgagaaggggaagggaggggagggcttacttttcttttttaaattacgaacattataaaatgatttttagaaa 12022237  T
Q  200 attgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||    
T  12022238 attgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 12022296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 108 - 259
Target Start/End: Complemental strand, 16024394 - 16024246
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| ||||||| |||||||||||| |||||||||  ||||| ||| |||||| |||||| ||||||||||||||||||||| ||||||||||||    
T  16024394 gtgtgtttggatggaggatttaggaggggaagggaggggagagtttacttttcttttt-aaattacggacattataaaatgatttttagaaaattgaatt 16024296  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  16024295 aacaacatg--ataaatgatcatataatacttcaaaaacacttaatttattt 16024246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 101 - 250
Target Start/End: Original strand, 8815137 - 8815284
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||||||||| |||||||||||||||||||| | |||| || |  ||| ||| ||||||||||||| ||||||||||||||||||||| |||||    
T  8815137 tcttagggtgtgtttggatggagggtttaggaggggaagagaggtgatgacttacttttcttttttaaattacggacattataaaatgatttttagaaaa 8815236  T
Q  201 ttgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    |||||| |||||||||  ||||||||| ||||||||||||||||||||||    
T  8815237 ttgaatcaacaacatg--ataaatgattatataatacttcaaaaacactt 8815284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 101 - 259
Target Start/End: Complemental strand, 34196555 - 34196402
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||| ||||| |||||||||||||||||||| ||| ||||| || ||| ||| |||||| ||||||  |||||||||||||||||||| |||||    
T  34196555 tcttagggtgcgtttggatggagggtttaggaggggaaggg-ggggagggcttacttttcttttt-aaattacagacattataaaatgatttttagaaaa 34196458  T
Q  201 ttgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||||  | ||||| |||||||||||||||||||||||||| ||||||||    
T  34196457 ttgaattaacaaca--agataaacgatcatataatacttcaaaaacactt-atttattt 34196402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 105 - 258
Target Start/End: Complemental strand, 30365374 - 30365223
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| ||||||| ||||| |||| | ||||||||| || ||  ||| |||||||||||||  |||||||| ||||||||||| |||||||||    
T  30365374 agggtgtgtttggatggaggatttagaagggtaagggaggggagggcttccttttcttttttaaattacagacattatgaaatgatttttagaaaattga 30365275  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    ||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||    
T  30365274 attaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatt 30365223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 40632994 - 40633142
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||| || ||| |||       ||||||| |||||||||||||| |||||| |||||||    
T  40632994 ttagggtgtgtttgaatggagggtttaggaggggaagggagaggagggcttacttt-------taaattacggacattataaaataatttttagaaaatt 40633086  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||  |||||||||  ||||||| ||||||||||||| |||||||||    
T  40633087 gaattaacaacatg--ataaatgattgtataatatttcaaaaacacttaatttatttt 40633142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 162 - 260
Target Start/End: Original strand, 8671849 - 8671947
Alignment:
Q  162 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||||| |||| |||||||||    
T  8671849 tttttaaattacggacattataaaatgatttttagaaaattgaattaacaatatgaaaaaaatgatcatataatacttcaaaaatacttaatttatttt 8671947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 9933450 - 9933332
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    |||||||| |||||| ||| |||||||||| | |||||||||||||||||||||   ||||||||||||||||||||  |||||||||||||||||| ||    
T  9933450 ggaggggagggtttacttttcttttttaaaatttggacattataaaatgattttaaaaaaattgaattaacaacatg--ataaatgatcatataatattt 9933353  T
Q  240 caaaaacacttcatttatttt 260  Q
    |||||| |||| |||||||||    
T  9933352 caaaaatacttaatttatttt 9933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 29937742 - 29937614
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 208  Q
    |||||||| |||||||||||| ||| |||||| |||| |     || ||| |||||| |||||||||||||||||||||||||||| |||||||||||||    
T  29937742 tgtgtttggatggagggtttaagagtggagggaagggaagaacatacttttctttttaaaattatggacattataaaatgatttttagaaaattgaatta 29937643  T
Q  209 acaacatgatataaatgatcatataatactt 239  Q
    ||||||||  |||||||||||||||||||||    
T  29937642 acaacatg--ataaatgatcatataatactt 29937614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 20472747 - 20472845
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||  ||||||||||||| | |||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||| ||||||||    
T  20472747 cttttttaaattacagacattataaaataaattttagaaaattgaattaacaatatgatat--atgatcatataatacttcaaaaacacttgatttattt 20472844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 39449518 - 39449398
Alignment:
Q  135 ggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataa 234  Q
    ||||||||||||| || |||  |||||||||||| |||  ||| ||||||||| ||||||  ||||||||||||||||||||  || |||||||||||||    
T  39449518 ggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaattaacaacatg--attaatgatcatataa 39449421  T
Q  235 tacttcaaaaacacttcatttat 257  Q
    ||||||||||||| || ||||||    
T  39449420 tacttcaaaaacagttaatttat 39449398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 103 - 258
Target Start/End: Complemental strand, 31738669 - 31738516
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa-aat 201  Q
    |||||||||||||| |||||||||||||||||||| |  |||||| ||||||  || | ||||||||||| ||||| |||||||| |||||||||| | |    
T  31738669 ttagggtgtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacggacactataaaat-attttttgaagagt 31738571  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    | |  ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||    
T  31738570 taacatattaacatg--ataaatgatcatataatacttcaattacacttaatttatt 31738516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 6453356 - 6453275
Alignment:
Q  177 cattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||| |||||||||||||| ||||||  |||| | ||||||||||||||||||||||||| || ||||||    
T  6453356 cattataaaatgatttttagaaaattgaattaataacatg--ataagtaatcatataatacttcaaaaacacttaatatatttt 6453275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 181 - 260
Target Start/End: Complemental strand, 43826500 - 43826423
Alignment:
Q  181 ataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||| |||||| |||||||||||||||||||||  ||||||||||||| |||||||||||||||||| | |||||||    
T  43826500 ataaaataatttttagaaaattgaattaacaacatg--ataaatgatcataaaatacttcaaaaacacttaacttatttt 43826423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 31543318 - 31543244
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||  || ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||||||    
T  31543318 ttagggtgtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggac 31543244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 260
Target Start/End: Original strand, 41103504 - 41103659
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttt-attttccttttt-taaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||| |||||||||||||||||||| | ||||||| ||||| |||||| |||||  |||||||||||| ||| ||| | ||||   ||||||    
T  41103504 agggtgtgtttggatggagggtttaggaggggaagagaggggagggtttgattttcgtttttaaaaattatggacactatgaaacgtttttaaaaaaatt 41103603  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     ||  || ||||||  ||||| ||||||||||||||||||  |||||| |||||||||    
T  41103604 aaaacaataacatg--ataaacgatcatataatacttcaatcacacttaatttatttt 41103659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 178
Target Start/End: Original strand, 3726861 - 3726936
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||||| |||||||||||||||||||| ||||  ||| |||||||||| | ||||||||||| |||||    
T  3726861 ttagggtgtgtttggatggagggtttaggaggggaagggaaaggacggtttatttttcatttttaaattacggaca 3726936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 103 - 176
Target Start/End: Complemental strand, 7503200 - 7503127
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatgga 176  Q
    |||||||||||||| || |||| ||| |||||||||||||||||| |||||| ||| | |||||||||||||||    
T  7503200 ttagggtgtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatgga 7503127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 9434360 - 9434450
Alignment:
Q  167 aaattatggacattataaaa-tgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    |||||| ||| ||||||||| | ||||||  |||||||||||||||||||||||  |||||| |||||||||||||||| ||||| |||||||    
T  9434360 aaattacggatattataaaaataatttttaaaaaattgaattaacaacatgata--aatgataatataatacttcaaaaccacttaatttatt 9434450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 174
Target Start/End: Complemental strand, 9718723 - 9718654
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatg 174  Q
    |||||||||||| || |||||||||||||| || |||||||||| ||||| ||| |||||||||||||||    
T  9718723 agggtgtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatg 9718654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 200
Target Start/End: Complemental strand, 11785774 - 11785676
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||||||||| |||||||||||||||||| | | || |||| |||||  ||| | ||||||||||| ||||||||| |||| ||||||| ||||    
T  11785774 tcttagggtgtgtttggatggagggtttaggagggtaagagaagggagggtttgattttcatttttaaattacggacattatgaaat-attttttaaaaa 11785676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 43732729 - 43732679
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||| ||||||||||||| |||||| ||||||||||||||||||    
T  43732729 gtgagtcctcctctcccttcccctcctaaaccctcaatccaaacacaccct 43732679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 2248450 - 2248519
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||||| || ||| ||||||||||||| |||||||||  ||| | |||||||||||||||||    
T  2248450 ttagggtgtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaatta 2248519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 12022393 - 12022297
Alignment:
Q  99 attcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    ||||| |||||||||||| || |||||||||||||||||  |||||||| || | | |||  |||||||||||| ||||| | ||||||| ||||||    
T  12022393 attctaagggtgtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgttttttt 12022297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 31543072 - 31543160
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 193  Q
    ||||| |||||| |||||||||||| ||||||| ||||||||| |||||| ||| | ||||||||||| ||| | ||| ||||| ||||    
T  31543072 agggtatgtttggatggagggtttaagaggggaagggaggggagggtttacttttcatttttaaattacggaaactatgaaatgttttt 31543160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 2412961 - 2413004
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||    
T  2412961 cttagagtgtgtttggatggagggtttaggaggggaggggaggg 2413004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 298 - 337
Target Start/End: Original strand, 4247725 - 4247764
Alignment:
Q  298 cctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  4247725 cctcccttcccctcctaaaccttcaatccaaacacaccct 4247764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 12022337 - 12022387
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||||||||    
T  12022337 gtgagccctcccctcctttcccctcctaaaccctcaatccaaacacaccct 12022387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 260
Target Start/End: Original strand, 38198135 - 38198202
Alignment:
Q  191 tttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||| ||||||||| ||||||||||||||  ||||||||||||||||||||  |||||| ||| |||||    
T  38198135 tttttaaaaattgaaataacaacatgatat--atgatcatataatacttcaatcacacttaattcatttt 38198202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Complemental strand, 16653190 - 16653105
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 193  Q
    ||||||||| ||| | |||||| ||||||| |||||| || |||||| ||| | ||||||||||| ||||||||| ||||| ||||    
T  16653190 gtgtgtttggatgaatggtttaagaggggaagggaggagagggtttaattttcatttttaaattacggacattatgaaatgttttt 16653105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 198 - 254
Target Start/End: Original strand, 22591501 - 22591555
Alignment:
Q  198 aaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatt 254  Q
    ||||||||| ||||||||||||  ||||||||||||||||||||| | |||||||||    
T  22591501 aaattgaatgaacaacatgata--aatgatcatataatacttcaatagcacttcatt 22591555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 111 - 172
Target Start/End: Complemental strand, 36309081 - 36309020
Alignment:
Q  111 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||| |||||||||||||||||||| ||||||||| |||||| ||| | | |||||||||    
T  36309081 tgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatctttaaatta 36309020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Complemental strand, 2482021 - 2481977
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    ||||||||| |||||| |||||||||||||||||||| |||||||    
T  2482021 tcttagggtatgtttggatggagggtttaggaggggaagggaggg 2481977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 8815341 - 8815385
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||| |||||| |||||| ||||||||||||||||||    
T  8815341 cctcccctccctccccctcctaaaccctcaatccaaacacaccct 8815385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 31543116 - 31543072
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||||||||| || ||||||||| |||||    
T  31543116 cctcccctcccttcccctcttaaaccctccatccaaacataccct 31543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 31543272 - 31543316
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||    
T  31543272 cctcccctcccttcccctcctaaaccctcaatcgaaacacaccct 31543316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 43732887 - 43732931
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  43732887 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 43732931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 2248495 - 2248452
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||| |||||  ||||||||||||||||||    
T  2248495 ctcccctcccttcccctcctaaactctcaatccaaacacaccct 2248452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 172
Target Start/End: Complemental strand, 7394701 - 7394638
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||| || ||||||||||||||||| ||||||||| |||| | |||  ||||||||||||    
T  7394701 tgtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaatta 7394638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 9718489 - 9718524
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||| |||||||||||||||||||||||    
T  9718489 agggtgtgtttggatggagggtttaggaggggaggg 9718524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 24243050 - 24243199
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| |||||| ||||| ||||| |||| |||| | |  ||| ||| | |||| |||||| | ||| ||||||||| | |||| ||||||||    
T  24243050 agggtgtgtttggatggagagtttaagagggaagggaaggg-atgacttacttttcattttgaaattacg-acactataaaatg-tcttttaaaaattga 24243146  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    | ||| |||||||||  |||||||||||||||||||||  |||||| ||| ||||    
T  24243147 aataataacatgata--aatgatcatataatacttcaatcacacttaattaattt 24243199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 40990181 - 40990272
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttat-tttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||||| ||||||||||| ||||  ||  |||||||| ||||||| |||| |||||||| |||| |||| ||| ||||| ||||||    
T  40990181 agggtgtgtttggatggagggtttgggagaagaaaggaggggagggtttatatttcattttttaatttatagacactatgaaatgttttttt 40990272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 177
Target Start/End: Original strand, 1281149 - 1281215
Alignment:
Q  111 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||| || ||||||||||||||||| |||| | || |||||| ||| ||||||||||||| ||||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggac 1281215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 333
Target Start/End: Original strand, 7394663 - 7394701
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacaca 333  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  7394663 tcccctcccttcccctcctaaaccctcaatccaaacaca 7394701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 9718681 - 9718723
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||| |||| |||||| ||||||||||||||||||    
T  9718681 tcccctcccttctcctcctaaaccctcaatccaaacacaccct 9718723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 200
Target Start/End: Complemental strand, 11033649 - 11033567
Alignment:
Q  118 atggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    ||||||||||||||||| || |||||| |||| |||| ||| |  |||||||||||| | ||||| ||||| |||||| ||||    
T  11033649 atggagggtttaggaggagaagggaggagaagatttacttttcaattttaaattatgaatattatgaaatgtttttttaaaaa 11033567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 34634387 - 34634305
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 187  Q
    |||||||||||| |||||| ||||||||||||| |||| | || |||| |||||   ||||||||||| ||||| ||| ||||    
T  34634387 agggtgtgtttggatggagagtttaggaggggaagggatgtgagggttcattttttatttttaaattacggacactatgaaat 34634305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 1026857 - 1026894
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  1026857 ttaggctgtgtttggatggagggtttaggaggggaggg 1026894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 8815385 - 8815296
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||||| || ||||||||||||||||  ||||||||| |||| | |||   ||||||||||| | ||| | ||||||| |||||    
T  8815385 agggtgtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacgaacactgtaaaatgtttttt 8815296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 16024196 - 16024155
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||| || |||||| ||||||||||||||||    
T  16024196 ctcccctcccttcccttcctaaaccctcaatccaaacacacc 16024155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 26167888 - 26167847
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  26167888 ataaatgatcatataatacttcaataactctttatttatttt 26167847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 1027092 - 1027020
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| ||  ||||||||||| |||| ||||||| | |||| | ||| ||||||||||||| ||||    
T  1027092 agggtgtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggac 1027020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 9933280 - 9933240
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||| ||| |||| |||||||||||||||||||||||||    
T  9933280 ccctcctttctcctcctaaaccttcaatccaaacacaccct 9933240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 11033417 - 11033482
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 170  Q
    |||||||||||||| || |||||||||| || ||| ||||||||  |||||| ||| |||||||||||    
T  11033417 ttagggtgtgtttggattgagggtttagaagaggaagggagggg--ggtttacttttcttttttaaat 11033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 27483692 - 27483652
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  27483692 ataaattatcatataatacttcaataacactttatttattt 27483652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 41103548 - 41103504
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||| ||||||||| |||||| || |||||||||||||||    
T  41103548 cctcccctctcttcccctcctaaaccctccatccaaacacaccct 41103504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 102 - 259
Target Start/End: Complemental strand, 33519295 - 33519140
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||| |||||||||  |||||||||||||||||||| ||||||    
T  33519295 cttagggtgtgtttggatggagggtttaggaggggaagggaggggagggattacttttcttctttaaattacagacattataaaatgatttttagaaaat 33519196  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||    
T  33519195 tgaattaacaacatg--ataaatgatcatataatacttcaaaaacacttaatttattt 33519140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 100 - 250
Target Start/End: Original strand, 36267548 - 36267696
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||||||||||||| ||| ||||||||||||||||| ||||    
T  36267548 ttcttagggtgtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggatattataaaatgatttttagaaa 36267647  T
Q  200 attgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    ||||||| ||||| |||  ||||||||||||||||||||||||||||||||    
T  36267648 attgaatcaacaatatg--ataaatgatcatataatacttcaaaaacactt 36267696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 48881556 - 48881711
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| || ||| ||| ||||||||||||| |||||||||||||| |||||  |||||||    
T  48881556 ttagggtgtgtttggatggagggtttaggaggggaagggaggggatggcttacttttcttttttaaattacggacattataaaataattttcagaaaatt 48881655  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||  ||||||||| ||||||| ||||||||| |||| |||||||||    
T  48881656 gaattaacaacatg--ataaatgattatataatgcttcaaaaatacttaatttatttt 48881711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 28074103 - 28074255
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| || || |||||||||||||| |||||||||    | | ||| ||||||||||||| ||||||||||||||||||||| |||||||||    
T  28074103 agggtgtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacggacattataaaatgatttttagaaaattga 28074202  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||| ||  |||||||||||||||||||||||||||||||| ||||||||    
T  28074203 attaacaacctg--ataaatgatcatataatacttcaaaaacacttaatttattt 28074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 111 - 260
Target Start/End: Complemental strand, 37621012 - 37620865
Alignment:
Q  111 tgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaac 210  Q
    |||||| |||||||||||  || |||| ||||||||| |||||  ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  37621012 tgtttggatggagggtttgagaagggaagggaggggagggtttgcttttcttttttaaattatggacattataaaatgatttttggaaaattgaattatc 37620913  T
Q  211 aacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||  ||||| ||| ||||||||||||||||||| || |||||||||    
T  37620912 aacatg--ataaaagattatataatacttcaaaaacatttaatttatttt 37620865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 121 - 260
Target Start/End: Complemental strand, 35422192 - 35422055
Alignment:
Q  121 gagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatat 220  Q
    ||||||||||||||| |   ||| ||| |||||| ||| |||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||   ||    
T  35422192 gagggtttaggagggaaatagagtggagggtttacttttctttttaaaattacggacattataaaataatttttagaaaattgaattaacaacat--aat 35422095  T
Q  221 aaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||| ||||||| ||||||||||||||||| |||||||||    
T  35422094 aaataatcatatgatacttcaaaaacacttaatttatttt 35422055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 105 - 259
Target Start/End: Complemental strand, 48015451 - 48015299
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    ||||| |||||| |||||||| ||||||||||| |||||  ||  | ||| ||| | |||||||||||  ||| ||||||||| |||||| |||||||||    
T  48015451 agggtttgtttggatggagggattaggaggggaagggagatgagagcttacttttcgtttttaaattacagactttataaaataatttttggaaaattga 48015352  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||  |||||||||||||||||  ||||||||||||| ||||||||    
T  48015351 attaacaacatg--ataaatgatcatataatttttcaaaaacacttaatttattt 48015299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 39646657 - 39646560
Alignment:
Q  161 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  ||  ||||| ||||||||||||||||||| || |||||||||    
T  39646657 ttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatg--attgatgatgatataatacttcaaaaacagttaatttatttt 39646560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 126 - 259
Target Start/End: Complemental strand, 37926064 - 37925933
Alignment:
Q  126 tttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatg 225  Q
    ||||||| |||| ||||||||| |  | ||||| ||||| ||||||| ||||||||||||||||| ||| |||||||||||||||||||||  ||  |||    
T  37926064 tttaggaagggaagggaggggaggactcatttttcttttctaaattacggacattataaaatgatgtttagaaaattgaattaacaacatg--attgatg 37925967  T
Q  226 atcatataatacttcaaaaacacttcatttattt 259  Q
    || |||||||||||||||||||||| || |||||    
T  37925966 atgatataatacttcaaaaacacttaatctattt 37925933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 21857520 - 21857438
Alignment:
Q  176 acattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||| |||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| |||||||||    
T  21857520 acattataaaatgatttttagaaaattgaattaacaacatg--ataaatgatcatacaatatttcaaaaacacttaatttatttt 21857438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 131 - 260
Target Start/End: Original strand, 2087765 - 2087896
Alignment:
Q  131 gaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgat--ataaatgatc 228  Q
    ||||||| ||||| | |||  ||| ||| ||||||||||||| ||| |||||||||| ||||||  |||| |||||||||||||||||  |||| |||||    
T  2087765 gaggggaagggagagaaagacttacttttcttttttaaattacggatattataaaataatttttaaaaaaatgaattaacaacatgataaataattgatc 2087864  T
Q  229 atataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||| |  |||||||||    
T  2087865 atataatacttcaaaaacattaaatttatttt 2087896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 179 - 260
Target Start/End: Original strand, 3215934 - 3216013
Alignment:
Q  179 ttataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||| ||||||||||||||||| |||  ||||||||||||||||||||||| ||| |||| |||||||||    
T  3215934 ttataaaatgatttttagaaaattgaattaacaatatg--ataaatgatcatataatacttcataaatacttgatttatttt 3216013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 130 - 248
Target Start/End: Original strand, 31364070 - 31364183
Alignment:
Q  130 ggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatca 229  Q
    |||||||| |||||||||  | ||| ||| ||||| ||||||| ||||||||||||||||||||  ||||||||||| |||     || |||||||||||    
T  31364070 ggaggggaagggaggggagagcttacttttcttttctaaattacggacattataaaatgattttaagaaaattgaatcaac-----gacataaatgatca 31364164  T
Q  230 tataatacttcaaaaacac 248  Q
    |||||||||||||||||||    
T  31364165 tataatacttcaaaaacac 31364183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 260
Target Start/End: Original strand, 41496954 - 41497110
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||| | |||| |||   ||||||||||| ||||| ||  ||||| |||||| |||||    
T  41496954 cttagggtgtgtttggatggagggtttaggaggggaagggaggggatgatttactttttatttttaaattacggacaataggaaatg-ttttttaaaaat 41497052  T
Q  202 tgaa-ttaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    | ||  ||  ||||||  ||||||||||||||||| ||||||  |||||| |||||||||    
T  41497053 ttaacatattaacatg--ataaatgatcatataattcttcaatcacacttaatttatttt 41497110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 3143673 - 3143571
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaac-aacatgat-ataaatgatcatataatacttcaaaaacacttcatttat 257  Q
    |||||||||||||  ||||||||||||| ||||||  |||||||||||||  ||||  || ||||||||||||||||||||||||||| |||| ||||||    
T  3143673 cttttttaaattaatgacattataaaataatttttaaaaaattgaattaattaacaaaatgataaatgatcatataatacttcaaaaaaacttaatttat 3143574  T
Q  258 ttt 260  Q
    |||    
T  3143573 ttt 3143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 105 - 242
Target Start/End: Original strand, 30592253 - 30592388
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    ||||||| |||| ||||||| |||||||||| | |||| |||| || ||| ||| |||||||||||||  |||| |||||||||||||||  ||||||||    
T  30592253 agggtgtatttggatggaggatttaggagggaaagggaagggagggcttacttttcttttttaaattacagacactataaaatgatttttaaaaaattga 30592352  T
Q  205 attaacaacatgatataaatgatcatataatacttcaa 242  Q
    | |||  | |||  |||||| |||||||||||||||||    
T  30592353 aataatcatatg--ataaataatcatataatacttcaa 30592388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 39856109 - 39856037
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||| ||||    
T  39856109 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggac 39856037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 48013690 - 48013593
Alignment:
Q  162 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatat-aatacttcaaaaacacttcatttatttt 260  Q
    ||||||||| |  ||| ||||||||| |||||| |||||||||||||||||||||  |||||||||||||| |||  ||||||||||||| |||||||||    
T  48013690 tttttaaatcacagactttataaaataatttttagaaaattgaattaacaacatg--ataaatgatcatatgaatttttcaaaaacacttaatttatttt 48013593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 12670928 - 12670988
Alignment:
Q  197 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||| ||||    
T  12670928 aaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaattcattt 12670988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 16833944 - 16833786
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatgga---cattataaaatgattttttgaaa 199  Q
    |||||||||||||| ||| ||| |||| ||||||| || ||| || |  ||| ||| |||||| ||||||  ||   |||||||| || ||||||  |||    
T  16833944 ttagggtgtgtttggatgcaggatttaagaggggaaggaaggagaggagttacttttctttttaaaattacagacttcattataatataatttttataaa 16833845  T
Q  200 attgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||| ||||||  |||||||||||| ||||||||||||||||||| |||| ||||    
T  16833844 attgaattaataacatg--ataaatgatcatgtaatacttcaaaaacacttaatttttttt 16833786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 28074153 - 28074103
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||||    
T  28074153 gtgagttctcccctcccttcccctcctaaaccttcaatccaaacacaccct 28074103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 40196530 - 40196685
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| ||||||||||| |||||||| ||||| ||| |||||| ||| | ||||| ||||| ||||| ||||||||| ||| |  ||| ||    
T  40196530 ttagggtgtgtttggatggagggtttgggaggggaagggagaggagggtttacttttcatttttgaattacggacactataaaatgttttataaaaagtt 40196629  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     |  || |||| ||  |||||  |||||||||||||||||  |||||| |||||||||    
T  40196630 aacatatcaacctg--ataaacaatcatataatacttcaatcacacttaatttatttt 40196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 1051742 - 1051675
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||| || ||||||||||||||||| |||||| || | |||||||| |||||||||||||    
T  1051742 agggtgtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaatta 1051675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 4833531 - 4833598
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    ||||| |||||| |||||||||||||||||||| ||||||||| |||||| ||| | |||||||||||    
T  4833531 agggtatgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaatta 4833598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 47390853 - 47390924
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatg 174  Q
    |||||||||||||| || ||||| ||||||||||| ||||| ||| |||||| ||| |||||||||||||||    
T  47390853 ttagggtgtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatg 47390924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 170 - 260
Target Start/End: Complemental strand, 8122327 - 8122235
Alignment:
Q  170 ttatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcata----taatacttcaaaaacacttcatttatttt 260  Q
    |||| ||||||||||||| |||||| ||||||||||||||||| |||  |||||| ||||||    |||||||||||||||| || |||||||||    
T  8122327 ttatagacattataaaataatttttagaaaattgaattaacaagatg--ataaattatcatataattaatacttcaaaaacaattaatttatttt 8122235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 200
Target Start/End: Complemental strand, 31571713 - 31571619
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    ||||||||||| || ||||||||||||||||| | |||||||  ||||| ||| ||||||||||||| ||||  ||||| ||| |||||| ||||    
T  31571713 gggtgtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaa 31571619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 33519048 - 33519142
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    |||| ||||||| ||||||| |||||||||||| ||||||||| || | | |||  |||||||||||| | ||| ||||||||| ||||||||||    
T  33519048 agggagtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaa 33519142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 37925841 - 37925931
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||| | |||  |||||||||||| | ||| | ||||||| ||||||    
T  37925841 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttt 37925931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 25887237 - 25887192
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  25887237 tcctcccctcccttcccctcataaaccctcaatccaaacacaccct 25887192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 36267748 - 36267797
Alignment:
Q  288 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||    
T  36267748 tgagccctcccctcccttcccctcctaaaccctcaatccaaacacaccct 36267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 186
Target Start/End: Complemental strand, 47391100 - 47391019
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaa 186  Q
    |||||||||||| |||||||||||| ||||||| |||||||||  ||||  ||| | ||||||||||| ||||| |||||||    
T  47391100 agggtgtgtttggatggagggtttaagaggggaagggaggggagagtttggttttcatttttaaattacggacactataaaa 47391019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 18231835 - 18231763
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||| |||||||||||| |||||| ||||||||||||| ||||||||| | |||| ||| | |||||||||||    
T  18231835 ttctaagggtgtgtttggatggagcgtttaggaggggaagggaggggaggatttacttttcatttttaaatta 18231763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 175
Target Start/End: Complemental strand, 33655354 - 33655282
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatgg 175  Q
    |||| ||||||||| || ||||||||||||||||| | |||| || |||||| ||| ||||||||||||||||    
T  33655354 ttagagtgtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgg 33655282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 37925885 - 37925841
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  37925885 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 37925841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 39856065 - 39856109
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  39856065 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 39856109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 36267797 - 36267730
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||| || ||||||||||||||||| ||||||||| || | |||||  ||||||||||||    
T  36267797 agggtgtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaatta 36267730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 47391057 - 47391100
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||||||||| || |||||||||||||||    
T  47391057 ctcccctcccttcccctcttaaaccctccatccaaacacaccct 47391100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 39646519 - 39646469
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||| |||||||||||||||| ||| |||||| ||||||||||||||||||    
T  39646519 gtgattcctcccctcccttcctctcctaaaccgtcaatccaaacacaccct 39646469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 40282193 - 40282263
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 171  Q
    ||||||||| |||||| || ||||||||||||||||| ||||| ||| |||||  ||| ||||||||||||    
T  40282193 tcttagggtatgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 42306571 - 42306485
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    ||||||||| || |||||||||||||||||   ||||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||||    
T  42306571 gtgtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacggacactatgaaatgtttttt 42306485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 1051697 - 1051742
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||||||||||||| |||||| ||||||||||||||||||    
T  1051697 tcctctcctcccttcccctcctaaaccctcaatccaaacacaccct 1051742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 13770993 - 13770948
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||| |||| | ||||||||||||||||||    
T  13770993 tcctcccctcccttcccctcctaaatcctcaatccaaacacaccct 13770948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 34228518 - 34228563
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||| |||||||||||| ||||||||||||    
T  34228518 tcctcccctcccttctcctcctaaaccttcaattcaaacacaccct 34228563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 239
Target Start/End: Complemental strand, 7791896 - 7791831
Alignment:
Q  172 atggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    ||||||| ||||||||  |||||||||||||||| ||| ||||||  |||||| ||||||||||||||    
T  7791896 atggacactataaaatacttttttgaaaattgaaataaaaacatg--ataaataatcatataatactt 7791831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 187
Target Start/End: Original strand, 13770946 - 13771030
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 187  Q
    |||||||||||||| || |||| |||||||||||| ||||||||| | |||| ||    ||||||||||| ||||| ||||||||    
T  13770946 ttagggtgtgtttggattgaggatttaggaggggaagggaggggaggatttacttattatttttaaattacggacactataaaat 13771030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 33519248 - 33519292
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  33519248 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 33519292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 36267597 - 36267553
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  36267597 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 36267553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 13425120 - 13425187
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||| || ||||||||||||||||| || || ||| ||||||||||   |||||||||||    
T  13425120 agggtgtgtttggatagagggtttaggaggggaaggaagaggatggtttattttttatttttaaatta 13425187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 140
Target Start/End: Complemental strand, 17853104 - 17853069
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||| |||||||||||||||||||||||    
T  17853104 agggtgtgtttggatggagggtttaggaggggaggg 17853069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 25887190 - 25887257
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 170  Q
    |||||||||||||| || ||||||||| ||||||| ||||||||| | ||| |||| ||||| |||||    
T  25887190 ttagggtgtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaat 25887257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 34228567 - 34228496
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    ||||||||||||||||||| || ||||||||||| || ||||||||| | |||| ||| | |||| ||||||    
T  34228567 tcttagggtgtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaatta 34228496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 335
Target Start/End: Original strand, 37926036 - 37926083
Alignment:
Q  288 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||||||||| || |||| ||||||||| ||||||||    
T  37926036 tgagtcctcccctcccttcccttcctaaatcttcaatcctaacacacc 37926083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 195
Target Start/End: Complemental strand, 13771190 - 13771100
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||||  || ||||||||||||||||| |||||| ||  ||||| ||| | ||||||||||| ||||  ||||| ||| ||||||    
T  13771190 agggtgtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgttttttt 13771100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 195
Target Start/End: Complemental strand, 18795842 - 18795749
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||| ||||||||| || ||| |||||| |||||| || ||||||||| ||  ||| ||||||||||||| | ||| ||||||||| ||||||    
T  18795842 tcttagagtgtgtttggattgagagtttagaaggggaagg-aggggaaggcttgattttcttttttaaattacgaacaatataaaatgttttttt 18795749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 336
Target Start/End: Original strand, 31571671 - 31571713
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacaccc 336  Q
    |||||||| ||||||||| |||||| |||||||||||||||||    
T  31571671 ctcccctcgcttcccctcctaaaccctcaatccaaacacaccc 31571713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 41496999 - 41496957
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  41496999 tcccctcccttcccctcctaaaccctccatccaaacacaccct 41496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 48881600 - 48881558
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  48881600 tcccctcccttcccctcctaaaccctccatccaaacacaccct 48881558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 10315877 - 10315788
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||| ||||||| ||||| |||||||||||||| ||||| ||  | |||||||| | |||||||| || ||||| ||| ||||| |||||    
T  10315877 agggcgtgtttggatggaaggtttaggaggggaagggagagggtgatttatttttcatttttaaaatacggacactatgaaatgtttttt 10315788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 18063673 - 18063714
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  18063673 ataaatgatcatataatacttcaatcacacttaatttatttt 18063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 18231785 - 18231830
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||| |||||  || |||||||||||||||    
T  18231785 tcctcccctcccttcccctcctaaacgctccatccaaacacaccct 18231830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 20393734 - 20393693
Alignment:
Q  218 tataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||||||||||||||  |||||| ||||||||    
T  20393734 tataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 290 - 335
Target Start/End: Original strand, 23116425 - 23116470
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||    
T  23116425 agtcctcccctcccttcccctcgtaaaccctcggtccaaacacacc 23116470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 33655220 - 33655261
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  33655220 ataaatgatcatataatacttcaatcacacttaatttatttt 33655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 195
Target Start/End: Original strand, 37620771 - 37620864
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||| |||||||||| || |||||||| |||||||| |||||||||  ||| | |||   |||| |||||||| ||| | ||||||||||||||    
T  37620771 cttaaggtgtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgatttttt 37620864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 335
Target Start/End: Complemental strand, 37620817 - 37620776
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||||||  ||||| ||||||||||||||||    
T  37620817 ctcccctcccttcccctcccaaaccctcaatccaaacacacc 37620776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 294 - 331
Target Start/End: Complemental strand, 41008225 - 41008188
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaaca 331  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  41008225 ctcccctcccttcccctctcaaaccctcaatccaaaca 41008188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 48094102 - 48093984
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    |||||||| | |||| ||| ||||||||||||| | ||  ||||||||  |||||  | ||||||| ||| || ||||||  ||||||||||||||||||    
T  48094102 ggaggggaggatttacttttcttttttaaattacgaacgctataaaatcttttttatagaattgaaataataaaatgata--aatgatcatataatactt 48094005  T
Q  240 caaaaacacttcatttatttt 260  Q
     ||  |||||| |||||||||    
T  48094004 taaccacacttaatttatttt 48093984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 4833575 - 4833531
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || ||||||||| |||||    
T  4833575 cctcccctcccttcccctcctaaaccctccatccaaacataccct 4833531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 291 - 335
Target Start/End: Original strand, 18127433 - 18127476
Alignment:
Q  291 gtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||| |||||||||||||||| || |||||||||||||    
T  18127433 gtcctcccctcacttcccctcttaaaccatc-atccaaacacacc 18127476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 28074308 - 28074352
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||| |||||| ||| |||||| ||||||||||||||||||    
T  28074308 cctccccttccttcctctcctaaaccctcaatccaaacacaccct 28074352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 334
Target Start/End: Original strand, 31364249 - 31364285
Alignment:
Q  298 cctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||| |||||| |||||||||||||||    
T  31364249 cctcccttcccctcctaaaccctcaatccaaacacac 31364285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 40282241 - 40282197
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| |||||| |||||||||||| |||||    
T  40282241 cctcctctcccttcccctcctaaaccctcaatccaaacataccct 40282197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 47390899 - 47390855
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| ||| || ||||||||||||||||||    
T  47390899 cctccactcccttcccctcctaacccctcaatccaaacacaccct 47390855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 103; Significance: 3e-51; HSPs: 69)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 33744191 - 33744346
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| |||||||||| ||| || || ||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||    
T  33744191 ttagggtgtgtttggatggagggttaaggcggagaagggaggggagggtttacttttcttttttaaattatggacattataaaatgattttttgaaaatt 33744290  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||  ||||||||||||||| | |||||||||||||| |||||||||    
T  33744291 gaattaacaacatg--ataaatgatcatatatttcttcaaaaacacttaatttatttt 33744346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 93 - 260
Target Start/End: Complemental strand, 34981066 - 34980901
Alignment:
Q  93 ttgaacattcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattt 192  Q
    ||||| ||||||||||||||||| ||||||||||||| ||||||| ||||||||| |  ||| ||| |||||||||||||||||||||||||||||||||    
T  34981066 ttgaaaattcttagggtgtgttttaatggagggtttaagaggggaagggaggggaggacttacttttcttttttaaattatggacattataaaatgattt 34980967  T
Q  193 tttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     | ||||||||| |||||||||||  ||||||||| |||||||||||||||||||||| |||||||||    
T  34980966 atagaaaattgagttaacaacatg--ataaatgattatataatacttcaaaaacacttaatttatttt 34980901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 102 - 260
Target Start/End: Original strand, 40305667 - 40305818
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    ||||||||||||||| |||||||||||||||||||| |||||||      ||| ||| |||||||||||||  ||||||||||||| |||||| ||||||    
T  40305667 cttagggtgtgtttggatggagggtttaggaggggaagggagggc-----ttagttttcttttttaaattacagacattataaaataatttttagaaaat 40305761  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||| |||  ||||||||||||||| |||||||||||| ||| |||||||||    
T  40305762 tgaattaacaatatg--ataaatgatcatatagtacttcaaaaacccttaatttatttt 40305818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 108 - 260
Target Start/End: Complemental strand, 21581188 - 21581038
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| |||||||||||||||||||| ||||||||    |   ||||| ||||||||||||||||| |||| |||| |||||| ||||||||||||    
T  21581188 gtgtgtttggatggagggtttaggaggggaagggaggggtgactaacttttctttttttaaattatggacgttatgaaataatttttagaaaattgaatt 21581089  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||  ||||||| |||||| ||||||||||||||||| |||||||||    
T  21581088 aacaacatg--ataaatgttcatatgatacttcaaaaacacttaatttatttt 21581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 101 - 260
Target Start/End: Original strand, 15986620 - 15986777
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||||||||| |  ||||||||||||||||| ||||||||| |  ||| ||| ||||||||| |||  ||||||||||||||| ||||  ||||    
T  15986620 tcttagggtgtgtttggaaagagggtttaggaggggaagggaggggaggacttaattttcttttttaatttacagacattataaaatgacttttaaaaaa 15986719  T
Q  201 ttgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||  |  ||||||||||||||||||| |||||||||| |||||||||    
T  15986720 ttgaattaacaacat--ttaaaatgatcatataatactttaaaaacacttaatttatttt 15986777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 102 - 260
Target Start/End: Complemental strand, 10204823 - 10204667
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    ||||||||||||||| |  ||| ||||||||||||| ||||||||| |  ||| ||| ||||||||| |||  ||||||| ||||||||||||  |||||    
T  10204823 cttagggtgtgtttggaaagagagtttaggaggggaagggaggggaggacttacttttcttttttaatttacagacattaaaaaatgatttttaaaaaat 10204724  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||  |  |||||||||||||||||||||||||||||||| |||||||||    
T  10204723 tgaattaacaac--gtaataaatgatcatataatacttcaaaaacacttaatttatttt 10204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 105 - 259
Target Start/End: Original strand, 12035936 - 12036087
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| || || |||||||||||||| ||||| ||| |  || |||| ||||||||||||||| |||||||||||| ||| || |||||||||    
T  12035936 agggtgtgtttggatagatggtttaggaggggaagggagaggaggacttgtttttcttttttaaattatgaacattataaaattattattagaaaattga 12036035  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||| ||||||||  |||||| |||||||||||||| |||||||||| ||||||||    
T  12036036 att-acaacatg--ataaattatcatataatacttaaaaaacacttaatttattt 12036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 10043441 - 10043343
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||| | | ||||||||||||||||| ||||||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||| |||    
T  10043441 cttttttaaattacgaatattataaaatgatttttagaaaattgaattaacaacat--tataaataatcatataatacttcaaaaacacttaatttcttt 10043344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 6597835 - 6597920
Alignment:
Q  150 gtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatac 237  Q
    ||||| ||| ||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||  |||||||||||||||||||    
T  6597835 gtttacttttcttttttaaattacggacattgtaaaatgattttttgaaaattgaaataacaacatg--ataaatgatcatataatac 6597920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 260
Target Start/End: Original strand, 8551488 - 8551571
Alignment:
Q  175 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||  |||||| ||||||||||||  |||||||||||||||||||||| |||||||||| |||||||||    
T  8551488 gacattataaaatgatttttaaaaaattaaattaacaacat--tataaatgatcatataatactttaaaaacacttaatttatttt 8551571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 1658055 - 1657968
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||| ||| | ||||||||||| ||||| ||||||||| |||||    
T  1658055 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacggacactataaaatgtttttt 1657968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 10043008 - 10043162
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    ||||||||||||||||| ||||||||||||||  |   ||||| | |  ||| ||| |||| |||||||||  |||||| | ||| |||| | |||||||    
T  10043008 ttagggtgtgtttgaatcgagggtttaggaggaaaaatgaggg-atgacttacttttctttcttaaattataaacattaaagaattatttctagaaaatt 10043106  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||| ||| |||||    
T  10043107 gaattaacaacatgata--aatgatcatataatactttaaaaacacttaattaatttt 10043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 14245294 - 14245217
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| | ||||||||||| |||||    
T  14245294 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacggaca 14245217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 2184060 - 2183944
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| |||||||||||| ||||||| |  ||  || || ||||||| | | ||||||||| ||||||||||||||| | |||  ||||||    
T  2184060 ttagggtgtgtttggatggagggtttaagaggggaagatagaagagggcttatttttcctctttaaattacggacattataaaatgttatttaaaaaatt 2183961  T
Q  203 gaattaacaacatgata 219  Q
    ||| |||||||||||||    
T  2183960 gaaataacaacatgata 2183944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 6382516 - 6382419
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||| ||| ||| ||||||||||||||  ||||| |||||||||||||||||||||  ||||||| |||| | |||||||||||| |||| ||||||||    
T  6382516 cttttctaatttacggacattataaaatactttttagaaaattgaattaacaacatg--ataaatgttcatgtgatacttcaaaaagacttaatttattt 6382419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 102 - 260
Target Start/End: Original strand, 28279473 - 28279629
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    ||||||||||||||| ||||||||||| ||| ||||  || || |||  |||| ||| | ||||||||||||||||||||| ||||| |||||  ||| |    
T  28279473 cttagggtgtgtttggatggagggtttgggatgggaaagggggtgaaaatttacttttcatttttaaattatggacattatgaaatgttttttaaaaagt 28279572  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    | |  ||  ||||||  ||||||||||||||||||||||||  ||||||  ||||||||    
T  28279573 taacatattaacatg--ataaatgatcatataatacttcaatcacacttagtttatttt 28279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 14245088 - 14245182
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    |||||||||||| || ||||||||||||||||| ||||||||| | |||| ||| ||||||||||||| ||||| | | ||||| ||||| ||||    
T  14245088 agggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacggacactgtgaaatgttttttagaaa 14245182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 177
Target Start/End: Original strand, 16938477 - 16938551
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| ||||||||| ||| ||||    
T  16938477 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggac 16938551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 13634711 - 13634776
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 170  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  13634711 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaat 13634776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 194
Target Start/End: Complemental strand, 7544378 - 7544291
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||| |||||||||||||||||||| || |||||| |||||  ||| | ||||||||||| ||||| ||| ||||| |||||    
T  7544378 ggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacggacactatgaaatgtttttt 7544291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 183
Target Start/End: Original strand, 11436939 - 11437017
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattata 183  Q
    |||| ||||||| || ||||||||||||||||| ||||| ||| || ||| ||||||||||||||||| ||||| ||||    
T  11436939 agggcgtgtttggattgagggtttaggaggggaagggagaggagggcttactttccttttttaaattacggacaatata 11437017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 14245133 - 14245088
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  14245133 tcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14245088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 22023609 - 22023568
Alignment:
Q  99 attcttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  22023609 attcttagggtgtgtttggatggagggtttaggaggggaggg 22023568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 10476026 - 10476090
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 169  Q
    ||||||||||||||| ||||||||||||||||| |||| | || |||||| ||| ||||||||||    
T  10476026 agggtgtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaa 10476090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 10476274 - 10476230
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    |||||||||||||| |||||||||||||||||||| |||||||||    
T  10476274 ttagggtgtgtttggatggagggtttaggaggggaagggagggga 10476230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 13634755 - 13634711
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  13634755 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 13634711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 194
Target Start/End: Complemental strand, 13634954 - 13634866
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    ||||||||||| || ||||||||||||||||| ||||||||| || ||| ||| | ||||||||||| | ||| ||| ||||| |||||    
T  13634954 gggtgtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacgaacactatgaaatgtttttt 13634866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 14245246 - 14245290
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  14245246 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14245290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 16938523 - 16938479
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  16938523 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 16938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 26414893 - 26414965
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || |||||||||||||| || ||||||||| |||||| ||| | ||||||||||| ||||    
T  26414893 agggtgtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggac 26414965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 109 - 168
Target Start/End: Complemental strand, 2550592 - 2550533
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaa 168  Q
    |||||||| || ||||||||||||||||| ||||||||| |||||| ||| |||||||||    
T  2550592 tgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaa 2550533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 5688572 - 5688504
Alignment:
Q  190 ttttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||| |||||||||||||||||||||||  |  |||| |||||||||||||||||||||| || ||||||    
T  5688572 tttttagaaaattgaattaacaacatgattga--tgatgatataatacttcaaaaacacttaatctatttt 5688504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 293 - 336
Target Start/End: Original strand, 13634911 - 13634954
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccc 336  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  13634911 cctcccctcccttcccctcctaaaccctcaatccaaacacaccc 13634954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 292 - 335
Target Start/End: Complemental strand, 42681493 - 42681450
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  42681493 tcctcccctcctttcccctcttaaaccctcaatccaaacacacc 42681450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 11757144 - 11757074
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    ||||||||| |||||||||||| ||||||| ||||||||| ||||||  || | ||||||||||| |||||    
T  11757144 gtgtgtttggatggagggtttaagaggggaagggaggggagggtttagatttcatttttaaattacggaca 11757074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 34980850 - 34980812
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  34980850 ccctcccttcccctcctaaaccttcaatccaaacacacc 34980812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 337
Target Start/End: Original strand, 5688589 - 5688634
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||| |||||||||||| |||||| ||||||||||||||||||    
T  5688589 tcctcccttcccttcccctcctaaaccctcaatccaaacacaccct 5688634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 11757103 - 11757144
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||||||||||| || ||||||||||||    
T  11757103 cctcccctcccttcccctcttaaaccctccatccaaacacac 11757144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 16938723 - 16938634
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||||| |||||||||||||||| |||  |||||||| ||||||  || | |||||||||||  |||| ||| ||||| |||||    
T  16938723 agggtgtgtttggatggagggtttaggagaggaatggaggggagggtttagatttcatttttaaattactgacactatgaaatgtttttt 16938634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 193
Target Start/End: Complemental strand, 35176907 - 35176815
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaagg--tttattttccttttttaaattatggacattataaaatgatttt 193  Q
    ||||||||||||||  || ||||||||| |||||||||| ||||   |  |||| ||| ||||||||||||||||||| ||||||||| ||||    
T  35176907 ttagggtgtgtttggttgtagggtttagaaggggagggggggggggagaatttacttttcttttttaaattatggacactataaaatgctttt 35176815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 40305860 - 40305909
Alignment:
Q  288 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| |||| |||||| ||||||||||||||||||    
T  40305860 tgagttctcccctcccttctcctcctaaaccctcaatccaaacacaccct 40305909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 2550552 - 2550592
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacaca 333  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  2550552 cctcccctcccttcccctcctaaaccctcaatccaaacaca 2550592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 7544136 - 7544208
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || |||||||||||| |||| ||||||||| || | | ||| ||||||||||||| ||||    
T  7544136 agggtgtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggac 7544208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 7544180 - 7544136
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||| || |||||| ||||||||||||||||||    
T  7544180 cctcccctcccttcccttcctaaaccctcaatccaaacacaccct 7544136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 8551612 - 8551660
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  8551612 gtgagaccccccctctcttcccctcctaaaccttcaatccaaacacacc 8551660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 242
Target Start/End: Original strand, 13839783 - 13839863
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaa-ttgaattaacaacatgatataaatgatcatataatacttcaa 242  Q
    ||||||||||||||||||| ||||||||| | ||||||||| ||||| ||| ||||||||| | |  |||||||||||||||||    
T  13839783 cttttttaaattatggacactataaaatg-tattttgaaaagttgaaataataacatgatagaca--atcatataatacttcaa 13839863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 20147074 - 20147114
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  20147074 ccctcccttcccctcctaaaccctcaatccaaacacaccct 20147114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 26414937 - 26414893
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||| |||||| ||||||||||||||||||    
T  26414937 cctcccctcccttctcctcctaaaccctcaatccaaacacaccct 26414893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 10476229 - 10476272
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||| |||||| || |||||||||||||||    
T  10476229 ctcccctcccttcccctcctaaaccctccatccaaacacaccct 10476272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 12035983 - 12035936
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||| ||||||||||||| |||||| || |||||||||||||||    
T  12035983 agtcctcctctcccttcccctcctaaaccatctatccaaacacaccct 12035936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 15986671 - 15986624
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||||| |||||| ||  ||||||||||||||    
T  15986671 agtcctcccctcccttcccctcctaaaccctctttccaaacacaccct 15986624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 34981007 - 34981054
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||||||||||||| || ||  |||||||||||    
T  34981007 agtcctcccctcccttcccctcttaaaccctccattaaaacacaccct 34981054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 37551652 - 37551585
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 169  Q
    ||||||||||||||| |||||||||||| ||||| | ||||| ||| |||||| ||| | ||||||||    
T  37551652 cttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37551585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 37654482 - 37654415
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 169  Q
    ||||||||||||||| |||||||||||| ||||| | ||||| ||| |||||| ||| | ||||||||    
T  37654482 cttagggtgtgtttggatggagggtttacgagggaaagggagaggatggtttacttttcatttttaaa 37654415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 1658013 - 1658055
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||||||| |||||| || |||||||||||||    
T  1658013 cctcccctcccttcccctcctaaaccctccatccaaacacacc 1658055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 147
Target Start/End: Complemental strand, 5688638 - 5688592
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    |||||||||||||||| || ||||||||||||||||| |||| ||||    
T  5688638 tcttagggtgtgtttggattgagggtttaggaggggaagggaaggga 5688592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 10043302 - 10043252
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||| ||||||||||||||||| |||||| |||||| ||| |||||||    
T  10043302 gtgagtcatcccctcccttcccctcataaaccatcaatctaaatacaccct 10043252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 10204626 - 10204576
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||| |||||||||||||| |||||| || |||||||||||||||    
T  10204626 gtgagccctcacctcccttcccctcctaaaccctcgatccaaacacaccct 10204576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 299 - 337
Target Start/End: Complemental strand, 13298309 - 13298271
Alignment:
Q  299 ctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| |||||||||||||||||||    
T  13298309 ctcccctcccctcttaaacattcaatccaaacacaccct 13298271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 15986818 - 15986868
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||| || |||||||||| |||||| ||||||||||||||||||    
T  15986818 gtgagccctcctcttccttcccctcctaaaccctcaatccaaacacaccct 15986868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 145
Target Start/End: Original strand, 20409663 - 20409705
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    ||||||| |||||| ||||||||||| ||||||||||||||||    
T  20409663 ttagggtatgtttggatggagggttttggaggggaggggaggg 20409705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 36363271 - 36363193
Alignment:
Q  110 gtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 188  Q
    ||||||| |||||||||||||||||||| |||||| ||  ||| | ||| | ||||||||||| ||| | |||||||||    
T  36363271 gtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggatactataaaatg 36363193  T

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Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 300 - 337
Target Start/End: Complemental strand, 40815334 - 40815297
Alignment:
Q  300 tcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||| |||| ||||||||||||||||||||    
T  40815334 tcccttcccctcctaaatcttcaatccaaacacaccct 40815297  T

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Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 11436983 - 11436939
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| |||||| ||||||||||||| ||||    
T  11436983 cctcctctcccttcccctcctaaaccctcaatccaaacacgccct 11436939  T

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Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 12600703 - 12600743
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||| ||||||||| |||||||| |||||||||||||    
T  12600703 ctcccctctcttcccctcctaaaccttaaatccaaacacac 12600743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 15858990 - 15858942
Alignment:
Q  99 attcttagggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    ||||||||||||||||||||| |||| ||| ||||| || |||||||||    
T  15858990 attcttagggtgtgtttgaattgaggctttgggaggtgaagggagggga 15858942  T

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Target: chr5; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 145
Target Start/End: Complemental strand, 20147114 - 20147074
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    |||||||||||| || ||||||||||||||||| |||||||    
T  20147114 agggtgtgtttggattgagggtttaggaggggaagggaggg 20147074  T

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Target: chr5; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 200
Target Start/End: Original strand, 29002241 - 29002301
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||| |||||| ||| | ||||||||||||| ||| ||||||||| |||||| ||||    
T  29002241 ggaggggagggtttacttttcatttttaaattatgaacactataaaatgttttttttaaaa 29002301  T

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Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 40305710 - 40305670
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||||| || |||||||||||||||    
T  40305710 ccctcccttcccctcctaaaccctccatccaaacacaccct 40305670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 8e-49; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 45257553 - 45257398
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| ||||||| ||||||| |||| |||||| || |||||| ||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  45257553 ttagggtgtgtttggatggaggttttaggatgggaagggaggagatggtttacttttcttttttaaattacggatattataaaatgattttttgaaaatt 45257454  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  45257453 gaattaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 45257398  T

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Target: chr2; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 111 - 260
Target Start/End: Complemental strand, 31061598 - 31061450
Alignment:
Q  111 tgtttgaatggagggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaa 209  Q
    |||||| || |||||||||||||||||  |||||||| | |||| ||||| ||||||||||||  ||||||||||| ||| |||||||||||||||||||    
T  31061598 tgtttggattgagggtttaggaggggaatggaggggaggatttacttttctttttttaaattacagacattataaagtgactttttgaaaattgaattaa 31061499  T
Q  210 caacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||  |||||||||||||||||| ||||||||||||| |||||||||    
T  31061498 caacatg--ataaatgatcatataatatttcaaaaacacttaatttatttt 31061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 105 - 259
Target Start/End: Complemental strand, 42813864 - 42813712
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| ||| |||||||||||||||| | ||||||| || ||||||| ||||||||||||| | ||||||||||||||||||| |||||||||    
T  42813864 agggtgtgtttggatgaagggtttaggaggggaagagaggggatggcttatttttcttttttaaattacgaacattataaaatgatttttagaaaattga 42813765  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||| ||  |||||| |||||||||||||| ||||| | || ||||||||    
T  42813764 attaacaacctg--ataaataatcatataatactttaaaaatatttgatttattt 42813712  T

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Target: chr2; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 161 - 260
Target Start/End: Original strand, 15085756 - 15085853
Alignment:
Q  161 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||| |||||| ||||||||||||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||||||||||| |||||||||    
T  15085756 tttttaaaattacggacattataaaatgatttttagaaaattgaattaacaacttg--ataaatgatcatataatacttcaaaaacacttaatttatttt 15085853  T

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Target: chr2; HSP #5
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 103 - 218
Target Start/End: Complemental strand, 22356250 - 22356134
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca-ttataaaatgattttttgaaaat 201  Q
    |||||||||||||| || |||| |||||||||||| ||||||||| |||| ||||| ||||||||||||| ||||| |||||||||||||||| ||||||    
T  22356250 ttagggtgtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacggacatttataaaatgatttttagaaaat 22356151  T
Q  202 tgaattaacaacatgat 218  Q
    ||||||||||| |||||    
T  22356150 tgaattaacaaaatgat 22356134  T

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Target: chr2; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 33265794 - 33265697
Alignment:
Q  161 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||| ||| | ||||||||||||||||||||||||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||    
T  33265794 ttttttaaattatgaacaatgtaaaatgattttttgaaaattgaattaacaatatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 33265697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 122 - 259
Target Start/End: Original strand, 1052771 - 1052907
Alignment:
Q  122 agggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatat 220  Q
    ||||||||||||| ||  |||||||||| |||| ||||| ||||||||||||| || |||||||||| |||||| |||||||||||||||||||||  ||    
T  1052771 agggtttaggaggagaatggaggggaagatttacttttctttttttaaattatcgatattataaaataatttttagaaaattgaattaacaacatg--at 1052868  T
Q  221 aaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||| ||||||| |||||||||| || ||||||||    
T  1052869 aaatgatcgtataatatttcaaaaacatttaatttattt 1052907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 163 - 260
Target Start/End: Complemental strand, 45098355 - 45098260
Alignment:
Q  163 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||  |||||||||||||| |||||  |||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  45098355 ttttaaattacagacattataaaatggtttttgaaaaattgaattaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 45098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 167 - 260
Target Start/End: Complemental strand, 34187759 - 34187666
Alignment:
Q  167 aaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgat--catataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||   |||||||||||||||||||||| |||||||||    
T  34187759 aaattatggacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgattatatataatacttcaaaaacacttaatttatttt 34187666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 35325456 - 35325360
Alignment:
Q  162 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||  ||||||||||||| ||||||  ||||||||||||| |||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  35325456 tttttaaattaacgacattataaaataatttttaaaaaattgaattaataacatgata--aatgatcatataatacttcaaaaatacttaatttatttt 35325360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 101 - 260
Target Start/End: Original strand, 2380988 - 2381140
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggagggga-ggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    ||||||| |||||||| || ||||||||||||||||| |||||||||| |  | ||||| |||||||||| |||      |||||||||| |||| ||||    
T  2380988 tcttaggatgtgtttggatagagggtttaggaggggaaggggaggggaggactcatttttcttttttaaaatat------tataaaatgaattttagaaa 2381081  T
Q  200 attgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||| ||||||||||  |  |||| |||||||||||||||||||||| |||||||||    
T  2381082 attgaattgacaacatgattga--tgatgatataatacttcaaaaacacttaatttatttt 2381140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 259
Target Start/End: Original strand, 31928121 - 31928196
Alignment:
Q  182 taaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||| ||||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  31928121 taaaatgatttttttaaaattgaattaataacatgata--aatgatcatataatacttcaaaaacacttaatttattt 31928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 160 - 248
Target Start/End: Original strand, 3094408 - 3094494
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 248  Q
    ||||||||||||| | || ||||||||||||| || |||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  3094408 cttttttaaattacgaacgttataaaatgattcttagaaaattgaattaacaacatg--ataaataatcatataatacttcaaaaacac 3094494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 118 - 255
Target Start/End: Complemental strand, 9313219 - 9313079
Alignment:
Q  118 atggagggtttaggaggggaggggaggggaaggt-ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatg 216  Q
    |||||||||||||||||||| | |||| || ||  ||| ||| | |||||||||||  |||||||||||||||||||| |||||||||||||||||| ||    
T  9313219 atggagggtttaggaggggatgagaggagaggggcttacttttcctttttaaattacagacattataaaatgatttttcgaaaattgaattaacaacttg 9313120  T
Q  217 at--ataaatgatcatataatacttcaaaaacacttcattt 255  Q
    ||  || |  |||||||| ||||||||||||||||| ||||    
T  9313119 ataaatgatcgatcatattatacttcaaaaacacttaattt 9313079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 8554354 - 8554441
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacact 249  Q
    |||||| |||||| |||||||||||||| ||||||| ||||||||||||||| ||||  |||||||||| || |||||||||||||||||    
T  8554354 ctttttcaaattacggacattataaaataattttttaaaaattgaattaacatcatg--ataaatgatcgtacaatacttcaaaaacact 8554441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 21502222 - 21502124
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||| || ||| |||||||||| |||||  |||||||| |||||||||| ||||  |||| |||||||||||||||||||||||| ||||||||    
T  21502222 cttttttaaactacggatattataaaataattttaagaaaattgcattaacaacaagata--aatggtcatataatacttcaaaaacacttaatttattt 21502125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 31795772 - 31795922
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| |||||||||||| |||| || ||||||||| |  ||| ||| | ||||||||||| ||||| ||| ||| | |||||| |||| | || |    
T  31795772 gtgtgtttggatggagggtttatgaggtgaagggaggggaggacttacttttcgtttttaaattacggacactatgaaaagtttttttaaaaaataaaat 31795871  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||  ||||| ||||||||||||||||||  |||||| |||||||||    
T  31795872 aacaacatg--ataaacgatcatataatacttcaatcacacttaatttatttt 31795922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 42296358 - 42296456
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||| ||| |||||||||||| |||| ||||| ||||||||||||||   |||||||||||||||||| || |||||||||| ||| ||||    
T  42296358 cttttttaaattacggatattataaaatgaattttagaaaaatgaattaacaacat--aataaatgatcatataataatttaaaaacacttaattcattt 42296455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 163 - 250
Target Start/End: Original strand, 36052145 - 36052230
Alignment:
Q  163 ttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    ||||||||||   ||||||||||||||||||| ||||||||||||||||||||   ||| |||||||||| |||||||||||||||||    
T  36052145 ttttaaattacatacattataaaatgatttttagaaaattgaattaacaacat--catacatgatcatatgatacttcaaaaacactt 36052230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 103 - 217
Target Start/End: Complemental strand, 16713771 - 16713657
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| |||||||||||||||  ||| |||||| ||  | || |||| |||||| ||| || ||| |||||||||| |||||| |||||||    
T  16713771 ttagggtgtgtttggatggagggtttaggaaaggaagggaggagagagcttgtttttctttttaaaactacggatattataaaataatttttagaaaatt 16713672  T
Q  203 gaattaacaacatga 217  Q
    ||||||| |||||||    
T  16713671 gaattaataacatga 16713657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 288 - 337
Target Start/End: Original strand, 8554446 - 8554495
Alignment:
Q  288 tgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  8554446 tgagtcctcccctccattcccctcttaaactttcaatccaaacacaccct 8554495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 260
Target Start/End: Complemental strand, 23748339 - 23748186
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||| | ||| | |||||||| || ||||| ||| |||||  ||||  ||| || |    
T  23748339 agggtgtgtttggatggagggtttaggaggggaagggaggggagggttcacttttcatttttaaactacggacactatgaaatgtcttttaaaaagttaa 23748240  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
      ||  ||||||  ||||| ||| ||||||||||||||  |||||| |||||||||    
T  23748239 catattaacatg--ataaacgataatataatacttcaatcacacttgatttatttt 23748186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 36046205 - 36046293
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    ||||||||||| ||||||||||||||||||||   |||||||  ||||||||| | ||||||||||| ||||| || |||||| |||||    
T  36046205 gggtgtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacggacactagaaaatgtttttt 36046293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 105 - 172
Target Start/End: Complemental strand, 15224938 - 15224871
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||| ||  |||||||||||||||| ||||||||| |||||| ||| |||||||||||||    
T  15224938 agggtgtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaatta 15224871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 35736173 - 35736240
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 170  Q
    |||||||||||||| || ||||||||||||||||| ||||||||| || ||| ||| |||||||||||    
T  35736173 ttagggtgtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaat 35736240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 36347787 - 36347713
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||| || ||||||||||||||||| |||| ||||  ||||| ||| ||||||||||||| ||||    
T  36347787 ttagggtgtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggac 36347713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 41778773 - 41778863
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||||| || |||||||||| |||| | ||||||||| |||||| |||  |  ||||||||||||||| ||||||||| ||||||    
T  41778773 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgttttttt 41778863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 17379842 - 17379894
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttt 153  Q
    |||||||||||||||| || ||||||||||||||||| ||||||||| |||||    
T  17379842 tcttagggtgtgtttggattgagggtttaggaggggaagggaggggagggttt 17379894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 17379890 - 17379846
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  17379890 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 17379846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 35736219 - 35736175
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  35736219 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 35736175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 8426881 - 8426968
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    ||||| ||||||||||| ||||||||||||| |||| |||| |||||| |||   ||||||||||| ||||| ||| ||||| |||||    
T  8426881 ggtgtatttgaatggagagtttaggaggggaagggaagggagggtttacttttaatttttaaattaaggacactatgaaatgtttttt 8426968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 31061409 - 31061359
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||||| ||| |||||||| |||||||||||||||||||||||||    
T  31061409 gtgagccctcccatcctttcccctcctaaaccttcaatccaaacacaccct 31061359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 36046401 - 36046443
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||||||| |||||| ||||||||||||||||    
T  36046401 cctcccctcccttcccctcataaaccctcaatccaaacacacc 36046443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 17380085 - 17380012
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||| || ||||||||||||||||| | ||||||| |||||  ||| | ||||||||||| |||||    
T  17380085 agggtgtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacggaca 17380012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 107 - 168
Target Start/End: Complemental strand, 35531898 - 35531837
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaa 168  Q
    |||||||||| ||| ||| |||||||||||||||||||||| ||||||  |||| |||||||    
T  35531898 ggtgtgtttggatgaaggttttaggaggggaggggaggggagggtttagattccatttttaa 35531837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 22356204 - 22356248
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||| | ||||||||||||||||||    
T  22356204 cctcccctcccttcccctcctaaatcctcaatccaaacacaccct 22356248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 23748295 - 23748339
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  23748295 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 23748339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 31795968 - 31796008
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| ||||||||||||||||||| |||||    
T  31795968 ccctcccttcccctcctaaaccttcaatccaaacaaaccct 31796008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 233
Target Start/End: Original strand, 17331410 - 17331535
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    |||| |||||||||||| |  ||||||| |||||||||  |||||||| |||||| ||| ||||||||| | |  | ||||||||||||||      |||    
T  17331410 ttctaagggtgtgtttgcaaagagggttaaggaggggaaaggaggggagggtttacttttcttttttaattcactggcattataaaatgat------aaa 17331503  T
Q  200 attgaattaacaacatgatataaatgatcatata 233  Q
    | |||||||| ||||||  |||||||||||||||    
T  17331504 aatgaattaataacatg--ataaatgatcatata 17331535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Original strand, 36347742 - 36347785
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||||||||||| |||||| ||||||||||||||||||    
T  36347742 ctcccttcccttcccctcctaaaccctcaatccaaacacaccct 36347785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 302 - 337
Target Start/End: Original strand, 39732937 - 39732972
Alignment:
Q  302 ccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39732937 ccttcccctctcaaaccttcaatccaaacacaccct 39732972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Complemental strand, 9427029 - 9426987
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||| |||||||||||||| ||||| |||||||||||||||||    
T  9427029 cctctcctcccttcccctcctaaactttcaatccaaacacacc 9426987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 17334006 - 17334056
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||||||||| |||||| ||||| |||| |||||||    
T  17334006 gtgagtcctccccttccttcccctcctaaaccctcaattcaaaaacaccct 17334056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 17380043 - 17380085
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||    
T  17380043 tcccctcacttcccctcctaaaccctcaatccaaacacaccct 17380085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 35736381 - 35736431
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||||||||||||| |||| |||||| || |||||||||||||||    
T  35736381 gtgagccctcccctcccttcacctcctaaaccctccatccaaacacaccct 35736431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Complemental strand, 35736431 - 35736389
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    |||||||||||| ||||||||||||||||| || |||||||||    
T  35736431 agggtgtgtttggatggagggtttaggaggtgaagggagggga 35736389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 39821902 - 39821868
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    ||||||||||| |||||||||||||||||||||||    
T  39821902 gggtgtgtttggatggagggtttaggaggggaggg 39821868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 45257357 - 45257307
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||| ||| |||||||| |||||  ||||||||||||||||||    
T  45257357 gtgagtcctcccttcctttcccctcctaaactctcaatccaaacacaccct 45257307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 9631804 - 9631731
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||| |||||||||||||||||| | |||||  || |||| | ||| | ||||||||||| |||||    
T  9631804 agggtgtgtttggatggagggtttaggagggaaagggagaagagggttaacttttcgtttttaaattacggaca 9631731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Original strand, 15224142 - 15224187
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    |||||||||  |||| |||||||||||||||||||| |||||||||    
T  15224142 cttagggtgcctttggatggagggtttaggaggggaagggagggga 15224187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 17334059 - 17334014
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    |||||||||| ||||||| ||||||||||||||||| || ||||||    
T  17334059 cttagggtgtttttgaattgagggtttaggaggggaaggaagggga 17334014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 21662456 - 21662415
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggagg 144  Q
    ||||||| |||||| ||||||||||| |||||||||||||||    
T  21662456 ttagggtatgtttggatggagggttttggaggggaggggagg 21662415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Original strand, 23748103 - 23748140
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||| || ||||||||||||||||||||    
T  23748103 ttagggtgtgtttggatcgagggtttaggaggggaggg 23748140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 34187815 - 34187778
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  34187815 ttagggtgtatttgaatggagggtttaggagtggaggg 34187778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 40022615 - 40022522
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||| ||| |||||||||||| |||| || ||||||||| ||||||  || | |||||||||||  |||| ||| ||||| |||||| ||||    
T  40022615 ggtgtgcttggatggagggtttaagaggagaagggaggggagggtttacatttcatttttaaattacagacactatgaaatgtttttttaaaaa 40022522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 41778905 - 41778864
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  41778905 ataaatgatcatataatacttcaatcacacttaatttatttt 41778864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 42296549 - 42296480
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||||| || ||||| ||||||||||| |||||| || |||| | |||  ||||||||||||    
T  42296549 ttagggtgtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaatta 42296480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 177
Target Start/End: Complemental strand, 2241658 - 2241590
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||| ||| |||||||||| |||||  | ||||||  ||||||||| | ||||||||||||||||    
T  2241658 tgtgtttggatgaagggtttaggtggggaaagaaggggagagtttatttttcatttttaaattatggac 2241590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 3094547 - 3094595
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||| ||||||||||| || || |||||| ||||||||||||||||    
T  3094547 gtgagtcttcccctccctttccttcctaaaccctcaatccaaacacacc 3094595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 295 - 335
Target Start/End: Complemental strand, 16713534 - 16713494
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||| ||||||||||||||||||| |||||| |||||||||    
T  16713534 tcccttcccttcccctcttaaaccctcaatcaaaacacacc 16713494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 334
Target Start/End: Complemental strand, 31795816 - 31795772
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    ||||||||||||||||| |||| |||||| || ||||||||||||    
T  31795816 agtcctcccctcccttcacctcataaaccctccatccaaacacac 31795772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 41778817 - 41778773
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||    
T  41778817 cctcccctccctttcccttctaaaccctcaatccaaacacaccct 41778773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 42296503 - 42296547
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||| |||||||||||||| ||| || ||||||||||||||||||    
T  42296503 cctctcctcccttcccctcctaatccctcaatccaaacacaccct 42296547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 90; Significance: 2e-43; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 260
Target Start/End: Complemental strand, 26318546 - 26318396
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| |||||| ||||||||||| | ||||||||||| |||| ||| |||||||||||||||||  ||||||||||| |||| ||||||||||||    
T  26318546 gtgtgtttggatggagagtttaggagggaaagggaggggaagatttacttttcttttttaaattatggattttataaaatgacttttagaaaattgaatt 26318447  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  26318446 aacaacatg--ataattgatcatataatacttcaaaaacacttaatttatttt 26318396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 101 - 259
Target Start/End: Original strand, 9051530 - 9051686
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||| ||||| || |||| |||||||||| |  ||||| || |||||| |||  |||||||||||| ||| ||||||||||||||||| |||||    
T  9051530 tcttagggtgcgtttggattgaggatttaggagggaaatggaggagatggtttactttttttttttaaattacggatattataaaatgatttttagaaaa 9051629  T
Q  201 ttgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||||||  ||||||||||||||  ||||| |||||||||| ||||||||    
T  9051630 ttgaattaacaacatg--ataaatgatcatatgctactttaaaaacacttaatttattt 9051686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 99 - 260
Target Start/End: Complemental strand, 3841336 - 3841176
Alignment:
Q  99 attcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttga- 197  Q
    ||||| |||||||||||| ||| |||||||||||||||| |  |  |||||  ||| ||| ||||||||||||| |||||||||||||||||||||| |     
T  3841336 attctaagggtgtgtttggatgaagggtttaggaggggaagaaaatggaagacttacttttcttttttaaattacggacattataaaatgatttttttac 3841237  T
Q  198 -aaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     ||||||||||||||| ||||||  |||||| |||||||||||||||||||||| |||||||||    
T  3841236 aaaattgaattaacaa-atgata--aatgatgatataatacttcaaaaacacttaatttatttt 3841176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 105 - 260
Target Start/End: Original strand, 4097235 - 4097388
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| || ||||||||||||||||| || ||  ||  ||||| |||  |||||| ||| | ||||||||||||||  ||||| |||||||||    
T  4097235 agggtgtgtttggattgagggtttaggaggggaaggaagatgagagtttacttttattttttgaatcacggacattataaaatattttttagaaaattga 4097334  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||  ||||||||||||| |||||||| ||||||||| |||||||||    
T  4097335 attaacaacatg--ataaatgatcatacaatacttccaaaacacttaatttatttt 4097388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 31799120 - 31799025
Alignment:
Q  150 gtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 247  Q
    ||||| ||| ||||||||||||| ||| |||||||||| ||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  31799120 gtttacttttcttttttaaattacggatattataaaataattttttaaaaattgaattaacaacatg--ataaatgatcatataatacttcaaaaaca 31799025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 168 - 259
Target Start/End: Complemental strand, 15353544 - 15353456
Alignment:
Q  168 aattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||||||||||| ||||||||    
T  15353544 aattacggacattataaaatgatttttagaaaattgaattaacaacat--tataaatgatcatataatacatcaaaaacactt-atttattt 15353456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 247
Target Start/End: Original strand, 34176587 - 34176711
Alignment:
Q  121 gagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatat 220  Q
    ||||||||||||||||| |||||||||||  ||| ||| ||||||||||||| | | |||||||| ||||||||  |||||||||||||||| ||   ||    
T  34176587 gagggtttaggaggggatgggaggggaagacttacttttcttttttaaattacgaaaattataaattgatttttaaaaaattgaattaacaatat--aat 34176684  T
Q  221 aaatgatcatataatacttcaaaaaca 247  Q
    |||||||||||||||| ||||||||||    
T  34176685 aaatgatcatataatatttcaaaaaca 34176711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 151 - 260
Target Start/End: Original strand, 25468445 - 25468552
Alignment:
Q  151 tttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    |||| ||| |||||||||||||||||||||||||||| |||||  ||||||| | |||||||| ||  ||||||||| ||||||||||||||||||||||    
T  25468445 tttacttttcttttttaaattatggacattataaaataattttaagaaaattaatttaacaacgtg--ataaatgattatataatacttcaaaaacactt 25468542  T
Q  251 catttatttt 260  Q
     |||||||||    
T  25468543 aatttatttt 25468552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 15323406 - 15323316
Alignment:
Q  168 aattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| ||| |||||||| |||||||||    
T  15323406 aattacggacattataaaatgatttttagaaaattgaattaacaacatg--acaaatgatcatataatacatcagaaacacttaatttatttt 15323316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 247
Target Start/End: Original strand, 15373668 - 15373739
Alignment:
Q  174 ggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaaca 247  Q
    ||||||||||||||||||||| |||||||||||||||||||||  | ||||||||||||||||| |||||||||    
T  15373668 ggacattataaaatgatttttagaaaattgaattaacaacatg--acaaatgatcatataatacatcaaaaaca 15373739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 113 - 245
Target Start/End: Complemental strand, 10293484 - 10293354
Alignment:
Q  113 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 212  Q
    |||| ||| ||||||||||||| || |||||||||  | ||| ||| |||||| ||||||  || ||||||||||||||||| ||||| |||||| ||||    
T  10293484 tttggatgaagggtttaggaggagaagggaggggagagcttacttttctttttcaaattacagatattataaaatgatttttagaaaactgaattgacaa 10293385  T
Q  213 catgatataaatgatcatataatacttcaaaaa 245  Q
    |||   |||||| ||||||||||||||||||||    
T  10293384 cat--cataaataatcatataatacttcaaaaa 10293354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 260
Target Start/End: Original strand, 16737997 - 16738149
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttga-aaattga 204  Q
    ||||||||||| |||||||||||| ||| ||| | ||||||||| |||| ||| | ||||||||||||||| | ||| ||||| |||||||| ||||| |    
T  16737997 gggtgtgtttggatggagggtttaagagaggaagagaggggaagatttacttttcgtttttaaattatggaaactatgaaatg-ttttttgataaattaa 16738095  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    | ||| ||||||||||  | ||||||||||||||| || |||||||  ||||||||    
T  16738096 aataataacatgatat--acgatcatataatacttaaataacacttactttatttt 16738149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 10818229 - 10818308
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataa 184  Q
    |||||||||||| || ||||||||||||||||| |||||||||  ||||||||| ||||||||||||| ||||| |||||    
T  10818229 agggtgtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataa 10818308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 100 - 198
Target Start/End: Complemental strand, 14515720 - 14515623
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa 198  Q
    ||||||||||||||||| |||||||||||||||||||| || | |||| ||||||  || | ||||||||||||| ||| |||||||| ||||||||||    
T  14515720 ttcttagggtgtgtttggatggagggtttaggaggggaaggaaagggagggtttagatttcatttttaaattatgaacactataaaat-attttttgaa 14515623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 14515473 - 14515545
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || ||||||||||||||||| ||||||||| ||||| |||| ||||||||||||| ||||    
T  14515473 agggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggac 14515545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 23091045 - 23090995
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  23091045 gtgagccctcccctcccttcccctcctaaaccttcaatccaaacacaccct 23090995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 9721138 - 9721211
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||| || || |||||||||||||| ||||||||| |||||||||| | ||||||||||| |||||    
T  9721138 agggtgtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggaca 9721211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 242
Target Start/End: Complemental strand, 10818459 - 10818325
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaa 205  Q
    ||||||||||| || ||| ||||||||||||  ||||||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||||  || ||| |     
T  10818459 gggtgtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaatattaac 10818360  T
Q  206 ttaacaacatgatataaatgatcatataatacttcaa 242  Q
     ||  ||||||  ||||||||||||||||||||||||    
T  10818359 atattaacatg--ataaatgatcatataatacttcaa 10818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 9721182 - 9721138
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  9721182 cctcccctcccttcccctcctaaaccttcaatccaaacacaccct 9721138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 9051734 - 9051776
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  9051734 tcccctcccttcccctcttaaaccctcaatccaaacacaccct 9051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 178
Target Start/End: Original strand, 9719034 - 9719104
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    ||||||||| || ||||||||||||||||| ||||||||| | |||||||| | ||||||||||| |||||    
T  9719034 gtgtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacggaca 9719104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 113 - 186
Target Start/End: Complemental strand, 23091195 - 23091121
Alignment:
Q  113 tttgaatggagggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaa 186  Q
    |||| |||||||||||||||||||| ||||||||| || ||| ||||| |||||||||||| ||| |||||||||    
T  23091195 tttggatggagggtttaggaggggaagggaggggagggcttacttttctttttttaaattacggatattataaaa 23091121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 19278278 - 19278210
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    ||||||||| || ||| ||||||||||||| ||||||||| |||||||||| ||||||||||||| ||||    
T  19278278 gtgtgtttggattgagagtttaggaggggaagggaggggagggtttatttt-cttttttaaattacggac 19278210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 14515517 - 14515473
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  14515517 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 14515473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 665841 - 665923
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 188  Q
    |||||||||||| ||| |||||||||||||||| | ||||||| |||| ||||| | ||||||||||||| | ||||| |||||    
T  665841 agggtgtgtttggatg-agggtttaggaggggaagtgaggggagggttcatttttcatttttaaattatgaatattatgaaatg 665923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 200
Target Start/End: Complemental strand, 9298738 - 9298635
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggagggga-----ggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttg 196  Q
    ||||||||||||||| ||| |||| |||||||||||     |||||||||| |||||| ||| |  |||||||||| ||||||||| ||||| ||||||     
T  9298738 cttagggtgtgtttggatgaaggggttaggaggggaagggaggggaggggagggtttacttttcaattttaaattacggacattatgaaatgttttttta 9298639  T
Q  197 aaaa 200  Q
    ||||    
T  9298638 aaaa 9298635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 30487306 - 30487353
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtt 152  Q
    |||||||||||| |||||||||||||||||||| ||||||||| ||||    
T  30487306 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtt 30487353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 292 - 334
Target Start/End: Complemental strand, 9719076 - 9719034
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||||| |||||| |||||||||||||||    
T  9719076 tcctcccctcccttcccctcctaaaccctcaatccaaacacac 9719034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 295 - 337
Target Start/End: Complemental strand, 10818271 - 10818229
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||| |||||| ||||||||||||||||||    
T  10818271 tcccctcccttcccctcctaaaccctcaatccaaacacaccct 10818229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 260
Target Start/End: Complemental strand, 29693083 - 29692969
Alignment:
Q  152 ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaaca-----tgat-ataaatgatcatataatacttcaaaaa 245  Q
    ||||||| |||||||||||||  ||||||||||||| ||| || ||||| | ||||||||| |     | || |||||||||||| ||||||||||||||    
T  29693083 ttatttttcttttttaaattacagacattataaaataattcttagaaaaataaattaacaaaagaaaatcatgataaatgatcatgtaatacttcaaaaa 29692984  T
Q  246 cacttcatttatttt 260  Q
    ||||| |||| ||||    
T  29692983 cacttaatttgtttt 29692969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 184
Target Start/End: Complemental strand, 4097759 - 4097678
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataa 184  Q
    |||| ||||||||| || ||||||||| ||||||| ||||||| | |||| | ||| ||||||||||||| ||||| |||||    
T  4097759 ttagagtgtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataa 4097678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 334
Target Start/End: Original strand, 4097717 - 4097754
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||||||| |||||||||||||||    
T  4097717 ccctcccttcccctcttaaaccctcaatccaaacacac 4097754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 31849154 - 31849113
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||||||||||| ||||||| |||||||    
T  31849154 cctcccctcccttcccctcttaaaccctcaatcctaacacac 31849113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 199
Target Start/End: Original strand, 15353362 - 15353458
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    |||||||||||||| || ||||||||||||||||| |||||| ||  | | | |||  |||||||||||| | ||| | ||||||| ||||||||||    
T  15353362 ttagggtgtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaa 15353458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 30487350 - 30487306
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  30487350 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 30487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 140
Target Start/End: Original strand, 1300625 - 1300664
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  1300625 tcttagggtgtgtttggattgagggtttaggaggggaggg 1300664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 9721386 - 9721315
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 171  Q
    |||||||||||||||||||| ||||||||| || || | | ||||||  |||||| ||| ||||||||||||    
T  9721386 ttcttagggtgtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaatt 9721315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 15323264 - 15323225
Alignment:
Q  298 cctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  15323264 cctcccttcccctcctaaaccctcaatccaaacacaccct 15323225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 298 - 337
Target Start/End: Complemental strand, 15353403 - 15353364
Alignment:
Q  298 cctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||||| ||||||||||||||||||    
T  15353403 cctcccttcccctcctaaaccctcaatccaaacacaccct 15353364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 140
Target Start/End: Original strand, 21606854 - 21606889
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||| |||||||||||||||||||||||    
T  21606854 agggtgtgtttggatggagggtttaggaggggaggg 21606889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 255
Target Start/End: Complemental strand, 28477186 - 28477076
Alignment:
Q  152 ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaaca------tgat-ataaatgatcatataatacttcaaaa 244  Q
    ||||||| |||||||||||||  ||||||||||||| ||| || ||||| | ||||||||| |      | || |||||||||||| |||||||||||||    
T  28477186 ttatttttcttttttaaattacagacattataaaataattcttagaaaaataaattaacaaaagaaaaatcatgataaatgatcatgtaatacttcaaaa 28477087  T
Q  245 acacttcattt 255  Q
    |||||| ||||    
T  28477086 acacttaattt 28477076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 12811227 - 12811157
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    ||||||||||||||| || |||||||||||| |||| | ||||||| || ||| ||| ||| |||||||||    
T  12811227 cttagggtgtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaatta 12811157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 19278039 - 19278128
Alignment:
Q  110 gtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    ||||||| |||||||||||||||||||| || ||| ||  ||||| ||| | |||||||||||  |||| |||||||| ||||||| ||||    
T  19278039 gtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattactgacactataaaat-attttttaaaaa 19278128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 142
Target Start/End: Complemental strand, 4097480 - 4097443
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggagggga 142  Q
    |||||||||| | |||||||||||||||||||||||||    
T  4097480 agggtgtgttaggatggagggtttaggaggggagggga 4097443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 171
Target Start/End: Complemental strand, 9719273 - 9719208
Alignment:
Q  106 gggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 171  Q
    ||||||||||| || ||||||||| ||||||| | ||||||  |||||| ||| ||||||||||||    
T  9719273 gggtgtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaatt 9719208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Original strand, 15323223 - 15323264
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggagg 144  Q
    |||||||||||||| || ||||||||||||||||| ||||||    
T  15323223 ttagggtgtgtttggattgagggtttaggaggggaagggagg 15323264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 19278237 - 19278278
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    ||||||||||||||||||| |||||  |||||||||||||||    
T  19278237 cctcccctcccttcccctcctaaactctcaatccaaacacac 19278278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 336
Target Start/End: Original strand, 9719233 - 9719273
Alignment:
Q  296 cccctcccttcccctcttaaaccttcaatccaaacacaccc 336  Q
    |||||| ||||||||| |||||| |||||||||||||||||    
T  9719233 cccctctcttcccctcataaaccctcaatccaaacacaccc 9719273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 12811180 - 12811224
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||| |||||| || |||||| ||||||||||||||||||    
T  12811180 cctcccctctcttcccatcctaaaccctcaatccaaacacaccct 12811224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 287 - 335
Target Start/End: Original strand, 25468585 - 25468633
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||| |||| ||||||||| |||||||||||| | ||||||||||||||    
T  25468585 gtgaatccttccctcccttaccctcttaaaccattaatccaaacacacc 25468633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 219 - 259
Target Start/End: Complemental strand, 32926777 - 32926737
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  32926777 ataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 2e-43; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 4437428 - 4437578
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| ||||||||||||||| || | ||||||||| |  ||||||| ||||||||||||||||| |||||||||||||||||  |||||||||||    
T  4437428 gtgtgtttggatggagggtttaggatggaaagggaggggatgacttatttttcttttttaaattatggatattataaaatgatttttaaaaaattgaatt 4437527  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||  |||| ||||||||||||||||||||||||||| |||||||||    
T  4437528 aacaacatg--ataattgatcatataatacttcaaaaacacttgatttatttt 4437578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 100 - 258
Target Start/End: Complemental strand, 37761713 - 37761557
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    ||||||||||||||||| ||||||| ||||  |||||| ||||||||| || ||  ||| ||||||||||||||||||||||| ||||||||||| ||||    
T  37761713 ttcttagggtgtgtttggatggaggatttaaaaggggaagggaggggagggcttccttttcttttttaaattatggacattatgaaatgatttttagaaa 37761614  T
Q  200 attgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    |||||||||||||||||  ||||||||| |||||| ||||||||||||||| |||||||    
T  37761613 attgaattaacaacatg--ataaatgattatataacacttcaaaaacacttaatttatt 37761557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 259
Target Start/End: Original strand, 54576329 - 54576479
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 206  Q
    |||||||||| ||||||||||||| |||||| ||||||||| || ||| ||| |||||||| |||| ||||||||||||||||||| | |||||||||||    
T  54576329 ggtgtgtttggatggagggtttagaaggggaagggaggggagggcttacttttcttttttagattacggacattataaaatgatttatagaaaattgaat 54576428  T
Q  207 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||| ||  ||||||||| ||||||||||||||||||| || ||||||||    
T  54576429 taacaacgtg--ataaatgattatataatacttcaaaaacatttaatttattt 54576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 141 - 260
Target Start/End: Complemental strand, 43961618 - 43961501
Alignment:
Q  141 gaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttc 240  Q
    ||||||| || ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||  ||||||||||||||||||||||    
T  43961618 gaggggagggcttatttttcttttttaaattatgaacattataaaatgatttttagaaaattgaattatcaacatg--ataaatgatcatataatacttc 43961521  T
Q  241 aaaaacacttcatttatttt 260  Q
    |||||||||| |||||||||    
T  43961520 aaaaacacttaatttatttt 43961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 22186908 - 22186810
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||||||||||||||||||| ||||||||    
T  22186908 cttttttaaattacggacattataaaatgatttttagaaaattgaattaacaacatg--ataaatgattatataatacttcaaaaacactttatttattt 22186811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 17182518 - 17182638
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttg--aaaattgaattaacaacatgatataaatgatcatataatac 237  Q
    |||||||||| |||| ||| |||||||||||||| ||| ||||||||||||||||||  |||||||||||||||| ||||||  ||||||||||||||||    
T  17182518 ggaggggaagatttacttttcttttttaaattattgacgttataaaatgattttttgcaaaaattgaattaacaatatgata--aatgatcatataatac 17182615  T
Q  238 ttcaaaaacacttcatttatttt 260  Q
    ||||||||||||| |||||||||    
T  17182616 ttcaaaaacacttaatttatttt 17182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 47846090 - 47846208
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    ||||||||  ||||| ||| |||||||||||| ||||||||||||||| ||||||  ||||||||||||| ||||||  |||||| ||||||||||||||    
T  47846090 ggaggggagagtttacttttcttttttaaattctggacattataaaataatttttacaaaattgaattaagaacatg--ataaataatcatataatactt 47846187  T
Q  240 caaaaacacttcatttatttt 260  Q
    ||||||||||| |||||||||    
T  47846188 caaaaacacttaatttatttt 47846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 130 - 256
Target Start/End: Original strand, 7977520 - 7977645
Alignment:
Q  130 ggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatc 228  Q
    |||||| | ||||||||| || ||| ||||| |||||||||||| | |||||||||||| || |||||||||||||||||||||||||  ||||||||||    
T  7977520 ggagggaaagggaggggagggcttacttttctttttttaaattacgaacattataaaataatattttgaaaattgaattaacaacatg--ataaatgatc 7977617  T
Q  229 atataatacttcaaaaacacttcattta 256  Q
    ||||||||||||||||||| || |||||    
T  7977618 atataatacttcaaaaacaattaattta 7977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 102 - 260
Target Start/End: Complemental strand, 34995296 - 34995142
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    ||||||||||||||  || |||||||||||| |||| | ||||| |||  ||| ||| ||||||||||||| ||| ||||| ||||||||||| ||||||    
T  34995296 cttagggtgtgtttagattgagggtttaggaagggaagtgagggtaagacttacttttcttttttaaattacggatattatcaaatgatttttagaaaat 34995197  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||  ||||||  |||||| ||| ||||||||||||||||||||| |||||||||    
T  34995196 tgaatta--aacatg--ataaataatcttataatacttcaaaaacacttaatttatttt 34995142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 234
Target Start/End: Complemental strand, 5825140 - 5825013
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| |||||||||||||||| ||| | | || || | |||| ||| ||||||| |||||  |||||||||||||||||||| |||||||||    
T  5825140 agggtgtgtttggatggagggtttaggagaggaagtggggagaggatttacttttcttttttgaattacagacattataaaatgatttttagaaaattga 5825041  T
Q  205 attaacaacatgatataaatgatcatataa 234  Q
    ||||||||||||  ||||||||||||||||    
T  5825040 attaacaacatg--ataaatgatcatataa 5825013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 107 - 258
Target Start/End: Original strand, 21694890 - 21695040
Alignment:
Q  107 ggtgtgtttgaatgg--agggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||||||  |||||||||||||||| |||| |||| || ||| ||| ||||||||||||| ||||| ||||||||| |||||   |||||||    
T  21694890 ggtgtgtttgaatggggagggtttaggaggggaagggacgggagggcttacttttcttttttaaattacggacactataaaatggtttttaataaattga 21694989  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    | |||||| |||||   |||||||||||||||||||||  |||||| |||||||    
T  21694990 aataacaaaatgat---aatgatcatataatacttcaatcacacttaatttatt 21695040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 260
Target Start/End: Original strand, 29993774 - 29993924
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatt 207  Q
    ||||||||| ||  |||||||||||||||| | ||| ||| |  |  |||| ||||||||||||| ||||| ||||||||||||||| ||||||||||||    
T  29993774 gtgtgtttggattaagggtttaggaggggaagtgagtggaggactcgtttttcttttttaaattacggacactataaaatgatttttagaaaattgaatt 29993873  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||  ||  ||||| ||||||||||||||||| |||| || ||||||    
T  29993874 aacaacatg--attgatgatgatataatacttcaaaaatacttaatctatttt 29993924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 55080768 - 55080670
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||| | |||||||||||| |||||| ||||||| |||||||||||||  ||||||||||||| |||||||||||||||||| | ||||||    
T  55080768 cttttttaaattacgaacattataaaataatttttagaaaatttaattaacaacatg--ataaatgatcataaaatacttcaaaaacacttaacttattt 55080671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 100 - 188
Target Start/End: Complemental strand, 54935318 - 54935230
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 188  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||| | ||||||||||| ||||| ||| |||||    
T  54935318 ttcttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacggacactatgaaatg 54935230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 248
Target Start/End: Complemental strand, 11089705 - 11089619
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacac 248  Q
    ||||||||||||| |||| |||||||||  ||||| ||||||||||||||||||||   ||||||||||||||| ||||||||||||||    
T  11089705 cttttttaaattacggactttataaaatattttttagaaaattgaattaacaacat--cataaatgatcatatattacttcaaaaacac 11089619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 14539460 - 14539363
Alignment:
Q  161 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||| ||||||| | ||||||||||||| || || ||||||| |||||| ||||| |||  ||||||||||||||||||||||||||||| |||||||||    
T  14539460 ttttataaattacgaacattataaaatgtttgttagaaaattaaattaagaacataata--aatgatcatataatacttcaaaaacacttaatttatttt 14539363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 37711369 - 37711285
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaat 187  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| ||||||  || | ||||||||||| ||||| ||||||||    
T  37711369 ttagggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagatttcatttttaaattacggacactataaaat 37711285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 260
Target Start/End: Complemental strand, 51329983 - 51329887
Alignment:
Q  161 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||| ||| |||||||||| |||| | ||||||||||||||||| |||  ||||||||| ||||||||||||||||| |||| |||||||||    
T  51329983 ttttttaaattagggatattataaaataatttatagaaaattgaattaacaaaatg--ataaatgattatataatacttcaaaaa-acttaatttatttt 51329887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 161 - 250
Target Start/End: Original strand, 54001162 - 54001246
Alignment:
Q  161 ttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    |||||||||||| |||||||||||||| ||||||  |||||||||||   ||||||  ||||||||||||||||||||||||||||||||    
T  54001162 ttttttaaattacggacattataaaataatttttaaaaaattgaatt---aacatg--ataaatgatcatataatacttcaaaaacactt 54001246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 259
Target Start/End: Original strand, 17938115 - 17938259
Alignment:
Q  113 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 212  Q
    |||| ||||||||||||||||||||  |||||| |  ||||| ||| | |||||||||||||||||||||  |||| |||||  ||| || || ||| ||    
T  17938115 tttggatggagggtttaggaggggaatggagggaagagtttaattttcgtttttaaattatggacattatggaatgttttttaaaaatttaaaataataa 17938214  T
Q  213 catgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||  ||||| ||||||||||||||||||  |||||| ||||||||    
T  17938215 catg--ataaacgatcatataatacttcaatcacacttaatttattt 17938259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 27735987 - 27735836
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 206  Q
    |||||||||| |||||||||||||||||||| ||||||  | |||| ||||| | ||||||||||| ||||| ||||||||| |||||  | | ||        
T  27735987 ggtgtgtttggatggagggtttaggaggggaagggaggatagggttcatttttcatttttaaattacggacactataaaatgttttttaaagagttagca 27735888  T
Q  207 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||||    
T  27735887 tattaacatg--ataaatgatcatataatacttcaatcacacttaatttatttt 27735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 41174589 - 41174500
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||| ||| | ||||||| ||| ||||| ||| ||||| |||||    
T  41174589 agggtgtgtttggatggagggtttaggaggggaagggaggggatggtttagttttcatttttaatttagggacactatgaaatggttttt 41174500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 44145940 - 44145842
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    |||||||| || |||  |||||||||||| |||  ||||||||||||||||||||  ||||||||||||||| |||  ||||||||||||| ||||||||    
T  44145940 ggaggggagggcttacattccttttttaatttaaagacattataaaatgatttttaaaaaattgaattaacagcat--tataaatgatcatgtaatactt 44145843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 175 - 258
Target Start/End: Complemental strand, 9030390 - 9030309
Alignment:
Q  175 gacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    |||||||||||||||||||| ||||||| |||||| || |||  ||||||||| ||||||||||| |||||||||| |||||||    
T  9030390 gacattataaaatgatttttagaaaatttaattaataaaatg--ataaatgattatataatactttaaaaacacttaatttatt 9030309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 5730828 - 5730983
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaa-aat 201  Q
    |||||||||||||| |||||||||||||||||| | | || |||| ||||||  || | ||||||||||| ||||  |||||||| |||||||||| | |    
T  5730828 ttagggtgtgtttggatggagggtttaggagggaaagagatgggagggtttagatttcatttttaaattacggaccctataaaat-attttttgaagagt 5730926  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    | |  ||  ||||||  ||||||||||||||||||||||||  |||||| |||||||||    
T  5730927 taacatattaacatg--ataaatgatcatataatacttcaattacacttaatttatttt 5730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 44145823 - 44145773
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  44145823 gtgagtcctcccctcccttcccctcctaaaccttgaatccaaacacaccct 44145773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 105 - 195
Target Start/End: Original strand, 56135749 - 56135839
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||| |||||  |||||||||||| | ||| | ||||||| ||||||    
T  56135749 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgttttttt 56135839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 171
Target Start/End: Complemental strand, 46007948 - 46007879
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatt 171  Q
    ||||| ||||||||| || ||||||||||||||||| ||||||||| |||||| ||| ||||||||||||    
T  46007948 cttagagtgtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaatt 46007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 140 - 260
Target Start/End: Original strand, 47433743 - 47433861
Alignment:
Q  140 ggaggggaagg-tttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatact 238  Q
    ||||||||||| |||| ||| | |||||||||||||||||||||  |||| |||||  |||||| || ||| |||||   ||||| ||||||||||||||    
T  47433743 ggaggggaagggtttaattttcgtttttaaattatggacattatggaatgttttttaaaaaattaaaataataacat---ataaacgatcatataatact 47433839  T
Q  239 tcaaaaacacttcatttatttt 260  Q
    ||||  |||||| |||||||||    
T  47433840 tcaatcacacttaatttatttt 47433861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 45132741 - 45132667
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    ||||||||||||||||| ||| ||||||||||||| | |||| || |||||| ||| ||||||||||||| ||||    
T  45132741 ttagggtgtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggac 45132667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 194
Target Start/End: Complemental strand, 6938491 - 6938402
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||||| ||||| |||||| |||||||  |||||||| |||| | ||| | ||||||||||| ||| ||||||||||| |||||    
T  6938491 agggtgtgtttggatggaaggtttatgaggggaatggaggggagggttcacttttcatttttaaattacggatattataaaatgtttttt 6938402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 26166935 - 26167004
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||||| || |||||||||||||||||  ||||||||  |||| |||| |||||||||||||    
T  26166935 ttagggtgtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaatta 26167004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 31348565 - 31348500
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaat 170  Q
    |||||||||||| || ||| ||||||||||||| ||||||||| |||||| ||| |||||||||||    
T  31348565 agggtgtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaat 31348500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 100 - 260
Target Start/End: Complemental strand, 45742139 - 45741981
Alignment:
Q  100 ttcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaa 199  Q
    |||| |||||||||||| ||| |||||||||| ||| | |||||||||  ||||| ||| | ||||||||||| ||||| ||| ||||| |||||  |||    
T  45742139 ttctaagggtgtgtttggatgaagggtttaggcgggaaagggaggggagagtttacttttcatttttaaattacggacactatgaaatgttttttaaaaa 45742040  T
Q  200 attgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     || |  ||  ||||||  ||||| ||||||||||||||||||  ||| || |||||||||    
T  45742039 gttaacatattaacatg--ataaacgatcatataatacttcaatcacatttaatttatttt 45741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 49735468 - 49735541
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||| || ||||||||||||||||| ||||||||| |||| | ||| | ||||||||||| |||||    
T  49735468 agggtgtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacggaca 49735541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 56135881 - 56135840
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  56135881 ataaatgatcatataatacttcaaaaacacttaatttatttt 56135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 6891584 - 6891451
Alignment:
Q  125 gtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaat 224  Q
    ||||||||||||| | |||||||  ||||  ||| | ||||||||||||||||| ||| || || ||||   |||||| || ||| |||||  ||||||     
T  6891584 gtttaggaggggaagagaggggagagtttgattttcgtttttaaattatggacactatgaattgtttttaaaaaaattaaaataataacat--tataaac 6891487  T
Q  225 gatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||  |||||| |||||||||    
T  6891486 gatcatataatacttcaatcacacttaatttatttt 6891451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 49735512 - 49735468
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  49735512 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 49735692 - 49735736
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  49735692 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 49735736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 54320634 - 54320678
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  54320634 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 54320678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 172
Target Start/End: Original strand, 54935067 - 54935135
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggagggga-ggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||| || ||||||||||||||||| |||| ||||| |||||| ||| |||||||||||||    
T  54935067 agggtgtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaatta 54935135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 56135793 - 56135749
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  56135793 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 56135749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 154
Target Start/End: Complemental strand, 49735738 - 49735687
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttta 154  Q
    |||||||||||||| || ||||||||||||||||| ||||||||| ||||||    
T  49735738 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggttta 49735687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 178
Target Start/End: Complemental strand, 54320680 - 54320605
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||||| || ||||||||||||||||| ||||||||| |||||  |||   ||||||||||| |||||    
T  54320680 ttagggtgtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacggaca 54320605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 5731072 - 5731014
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttcctttttt 166  Q
    |||||||||||| ||||||||||||||||| |||||||||  |||| |||| |||||||    
T  5731072 gtgtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttt 5731014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 47433956 - 47433886
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||||||  | || |||||||||||||| ||||| ||| |||||| ||| |||||||||||||    
T  47433956 cttagggtgtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaatta 47433886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 152 - 209
Target Start/End: Original strand, 35543354 - 35543411
Alignment:
Q  152 ttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaa 209  Q
    ||||||| ||||||||||||| | |||||||||||| ||||||  |||||||||||||    
T  35543354 ttatttttcttttttaaattaggaacattataaaataatttttaaaaaattgaattaa 35543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 46007901 - 46007942
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    ||||||||||||||||||| |||||| |||||||||||||||    
T  46007901 cctcccctcccttcccctcctaaaccctcaatccaaacacac 46007942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 146
Target Start/End: Original strand, 53260718 - 53260759
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggagggg 146  Q
    |||||||||||| |||||||||||||||||||| ||||||||    
T  53260718 agggtgtgtttggatggagggtttaggaggggaagggagggg 53260759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 54935108 - 54935067
Alignment:
Q  296 cccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  54935108 cccctcccttcccctcctaaaccctcaatccaaacacaccct 54935067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 140
Target Start/End: Complemental strand, 56135967 - 56135930
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    |||||||||||||| |||||||||||||||||||||||    
T  56135967 ttagggtgtgtttggatggagggtttaggaggggaggg 56135930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 1968603 - 1968531
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || ||||||||||||||||| ||||||| |  ||||| ||| | ||||||||||| ||||    
T  1968603 agggtgtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggac 1968531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Original strand, 1968563 - 1968603
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  1968563 ccctcccttcccctcctaaaccctcaatccaaacacaccct 1968603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 6938447 - 6938491
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||| |||||||| ||||||||| |||||||||||||||    
T  6938447 cctcccctccattcccctcataaaccttccatccaaacacaccct 6938491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 7977697 - 7977741
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||| |||||||| |||||| ||||||||||||||||||    
T  7977697 cctcccctcctttcccctcataaaccctcaatccaaacacaccct 7977741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 194
Target Start/End: Original strand, 31348314 - 31348410
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttag-----gaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    |||||||||||||| |||||||||||||     ||||||| ||||||| | |||||| ||| | ||||||||||| ||||| ||| ||||| |||||    
T  31348314 ttagggtgtgtttggatggagggtttagtttatgaggggaagggagggaagggtttacttttcatttttaaattacggacactatgaaatgtttttt 31348410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 31348521 - 31348565
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||  ||||||||||||||||||    
T  31348521 cctcccctcccttcccctcctaaactctcaatccaaacacaccct 31348565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 113 - 260
Target Start/End: Complemental strand, 35248922 - 35248777
Alignment:
Q  113 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 212  Q
    |||| |||||||||||||||| ||  ||||||||| |||||| ||| |  |||||||||||||||| |  | |||  |||||| ||| || |  ||  ||    
T  35248922 tttggatggagggtttaggagaggtagggaggggagggtttacttttcaattttaaattatggacactcaagaatatttttttaaaagttaacgtattaa 35248823  T
Q  213 catgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||  |||||| |||||||||||||||||  |||||| |||||||||    
T  35248822 catg--ataaataatcatataatacttcaatcacacttaatttatttt 35248777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 37711182 - 37711138
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||    
T  37711182 cctcccttcccttcccctcctaaaccctcaatccaaacacaccct 37711138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 37711323 - 37711367
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  37711323 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 37711367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 233
Target Start/End: Complemental strand, 51075268 - 51075215
Alignment:
Q  178 attataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatata 233  Q
    |||||||||| ||||||  ||||||||||||||||||||  |||||||||||||||    
T  51075268 attataaaataatttttaaaaaattgaattaacaacatg--ataaatgatcatata 51075215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 54935269 - 54935313
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  54935269 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 54935313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 290 - 337
Target Start/End: Original strand, 17182682 - 17182729
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||| ||| |||||||| |||||| ||||||||||||||||||    
T  17182682 agtcctcccttcctttcccctcataaaccctcaatccaaacacaccct 17182729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 184
Target Start/End: Complemental strand, 21695132 - 21695053
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataa 184  Q
    |||||||||||| || | ||||||| ||||||| || || ||| |||||| ||| || |||||||||||||||| |||||    
T  21695132 agggtgtgtttggattgggggtttatgaggggaaggaagcggagggtttacttttctattttaaattatggacaatataa 21695053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 294 - 337
Target Start/End: Complemental strand, 26166980 - 26166937
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||| |||||||| |||||| ||||||||||||||||||    
T  26166980 ctcccctccattcccctcctaaaccctcaatccaaacacaccct 26166937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 55510356 - 55510261
Alignment:
Q  162 tttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||| | ||| |||||||| |||||   ||||||||| ||||||||||||   ||||||||||||||||||||   |||||| |||||||||    
T  55510356 tttttaaattacgaacactataaaat-attttaaaaaaattgaaataacaacatgatg--aatgatcatataatacttcagtcacacttaatttatttt 55510261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 109 - 195
Target Start/End: Original strand, 27735749 - 27735835
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||| || ||||||||||||||||| |||| | || |||||| ||| | ||||||||||| ||||  ||||| ||| ||||||    
T  27735749 tgtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgttttttt 27735835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 337
Target Start/End: Original strand, 41174547 - 41174589
Alignment:
Q  295 tcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||| |||||| || |||||||||||||||    
T  41174547 tcccctcccttcccctcctaaaccctccatccaaacacaccct 41174589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 107 - 201
Target Start/End: Complemental strand, 47846298 - 47846204
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    |||||||||| || ||||||||| |||| || |||| |||| |||||| |||  |||||||||||||| ||| | |||| || |||||| |||||    
T  47846298 ggtgtgtttggattgagggtttaagaggagaagggatgggagggtttacttttattttttaaattatgaacaatgtaaagtgttttttttaaaat 47846204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 47846256 - 47846298
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||    
T  47846256 cctcccatcccttctcctcttaaaccctcaatccaaacacacc 47846298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 37711138 - 37711215
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggag-----gggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || |||||||||||||     |||| ||||||||| ||||| |||| ||||||||||||| ||||    
T  37711138 agggtgtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggac 37711215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 37711275 - 37711234
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  37711275 ataaatgatcatataatacttcaatcacacttaatttatttt 37711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 49735696 - 49735648
Alignment:
Q  120 ggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 169  Q
    |||||||||||||||||| |||||||| ||||||| ||| ||||||||||    
T  49735696 ggagggtttaggaggggaagggagggg-aggtttagttttcttttttaaa 49735648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 337
Target Start/End: Complemental strand, 53260759 - 53260718
Alignment:
Q  296 cccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||| |||||| || |||||||||||||||    
T  53260759 cccctcccttcccctcctaaaccctccatccaaacacaccct 53260718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 305 - 337
Target Start/End: Original strand, 4437626 - 4437658
Alignment:
Q  305 tcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||| |||||||||||||||||||||||||    
T  4437626 tcccctcctaaaccttcaatccaaacacaccct 4437658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Original strand, 5731032 - 5731072
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||| |||||| ||||| |||||||||    
T  5731032 ctcccctcccttcccctcctaaaccctcaattcaaacacac 5731072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 37761664 - 37761708
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||| ||||| | || |||||||||||||||    
T  37761664 cctcccctcccttccccttttaaatcctccatccaaacacaccct 37761708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 47433909 - 47433953
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||    
T  47433909 cctcctctcccttcccctcctaaaccgtcaacccaaacacaccct 47433953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 195
Target Start/End: Complemental strand, 47846505 - 47846417
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||| || ||||||||| |||| || ||||  |||||||||| |||  |||||||||||||| ||| | |||| || ||||||    
T  47846505 ggtgtgtttggattgagggtttaagaggagaagggaaaggaaggtttacttttattttttaaattatgaacaatgtaaagtgttttttt 47846417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 54320475 - 54320435
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||| ||||| |||||| ||||||||||||||||||    
T  54320475 ccctccctttccctcctaaaccctcaatccaaacacaccct 54320435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 184847 - 184698
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 208  Q
    |||||||| |||||||||||||||||| | |||| |||| |||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  184847 tgtgtttggatggagggtttaggagggaaagggaagggagggtttactattcttttttaaattatggacattataaaatgatttttttaaaattgaatta 184748  T
Q  209 acaacatgatataaatgatcatataatacttc-aaaaacacttcatttattt 259  Q
    ||||||||||||  || ||||||||||||||| |||||||||| ||||||||    
T  184747 acaacatgatat--attatcatataatacttcaaaaaacacttaatttattt 184698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 140
Target Start/End: Original strand, 184608 - 184646
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggg 140  Q
    ||||||||||||||| || ||||||||||||||||||||    
T  184608 cttagggtgtgtttggattgagggtttaggaggggaggg 184646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 239
Target Start/End: Complemental strand, 35513037 - 35512909
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaatta 208  Q
    |||||||| |||||||||||||||||||| ||||||||| || ||| |||  |||||||||||||||||||||||||||||||||| |||||||||||||    
T  35513037 tgtgtttggatggagggtttaggaggggaagggaggggagggcttacttttattttttaaattatggacattataaaatgatttttagaaaattgaatta 35512938  T
Q  209 acaacatgatataaatgatcatataatactt 239  Q
    ||||||||  |||||||||||||||||||||    
T  35512937 acaacatg--ataaatgatcatataatactt 35512909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 105 - 260
Target Start/End: Original strand, 1085489 - 1085643
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggttta-ttttccttttttaaattatggacattataaaatgattttttgaaaattg 203  Q
    |||||||||||| |||||||||||||||||||   |||||||| |  ||| |||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  1085489 agggtgtgtttggatggagggtttaggagggggatggaggggaggacttacttttccttttttaaattacggacattagaaaatgatttttagaaaattg 1085588  T
Q  204 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    || ||||| ||||  |||||||||||||||||||||||||||||||| |||||||||    
T  1085589 aactaacagcatg--ataaatgatcatataatacttcaaaaacacttaatttatttt 1085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 113 - 260
Target Start/End: Complemental strand, 25268500 - 25268355
Alignment:
Q  113 tttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaa 212  Q
    |||| ||||||||||||| |||||| | ||||||| |||||| ||||||||||||||||| ||| ||||||||||||||||| ||||||| ||| |||||    
T  25268500 tttggatggagggtttagaaggggaagtgaggggagggtttactttccttttttaaattacggaaattataaaatgatttttagaaaatttaatcaacaa 25268401  T
Q  213 catgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    | ||  |||||||||||||||||||||||||||||||| |||||||||    
T  25268400 cgtg--ataaatgatcatataatacttcaaaaacacttaatttatttt 25268355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 105 - 259
Target Start/End: Complemental strand, 20607461 - 20607311
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttatt-ttccttttttaaattatggacattataaaatgattttttgaaaattg 203  Q
    |||||||||||| |||||||||||||||||||| ||||||||| |||||| | ||  |||||| |||||||||||||||||||||||||||||||||||     
T  20607461 agggtgtgtttggatggagggtttaggaggggaagggaggggagggtttactatttttttttttaattatggacattataaaatgattttttgaaaatta 20607362  T
Q  204 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||   ||||||||||  || ||||||||||||||||||||||||| ||||||||    
T  20607361 aatt---aacatgatat--attatcatataatacttcaaaaacacttaatttattt 20607311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 105 - 260
Target Start/End: Original strand, 51303384 - 51303537
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| || ||||||||||||||||||||||||||| || | | |||  ||||||| ||||   ||| | |||||||||||||| ||||||||    
T  51303384 agggtgtgtttggattgagggtttaggaggggaggggaggggagggctcacttttattttttatattaccaacaatgtaaaatgatttttttaaaattga 51303483  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  51303484 attaacaacatgata--aatgatcatataatacttcaaaaacacttaatttatttt 51303537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 260
Target Start/End: Complemental strand, 35928058 - 35927904
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| || ||||| |||| |||||| |||  |||| | |||| ||| |||||||||||||  ||  ||||||||| |||||  |||||||    
T  35928058 ttagggtgtgtttggattgagggcttagaaggggaaggggagggatgatttacttttcttttttaaattacagattttataaaataatttta-gaaaatt 35927960  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||    
T  35927959 gaattaacaacatgata--aatgatcatataatacttcaaaaatacttaatttatttt 35927904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 33643457 - 33643359
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||||| ||||| ||||||||||||| |||||||||||||| || |||  || ||||||||||||||||||||||||||||| ||||||||    
T  33643457 cttttttaaattatgaacattttaaaatgatttttagaaaattgaattaataatatg--atgaatgatcatataatacttcaaaaacacttaatttattt 33643360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 47071240 - 47071142
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||  ||||||||||||| |||| ||||||||||||| | ||||||    
T  47071240 cttttttaaattacggacattataaaatgatttttagaaaatttaattaacaacatg--ataaatgatcataaaatatttcaaaaacacttaacttattt 47071143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 107 - 260
Target Start/End: Complemental strand, 2506781 - 2506630
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaat 206  Q
    |||||||||| |||||| |||||| || ||| |||||| || |  ||| ||| |||||||||||||  || |||||||||| ||||||  ||||| ||||    
T  2506781 ggtgtgtttggatggagagtttagaagaggaagggaggagatgacttagttttcttttttaaattacagatattataaaataatttttaaaaaatcgaat 2506682  T
Q  207 taacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    |||||| || |||  ||||||||||||||||||||||||||||| |||||||||    
T  2506681 taacaatataata--aatgatcatataatacttcaaaaacacttaatttatttt 2506630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 150 - 259
Target Start/End: Original strand, 13386964 - 13387071
Alignment:
Q  150 gtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacact 249  Q
    ||||| ||| ||||||| |||||||||||| |||||| ||||||| |||||||||||||||||||||  |||||||||||||||||||   |||||||||    
T  13386964 gtttacttttctttttttaattatggacatcataaaacgatttttagaaaattgaattaacaacatg--ataaatgatcatataatacacaaaaaacact 13387061  T
Q  250 tcatttattt 259  Q
    | ||||||||    
T  13387062 taatttattt 13387071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 103 - 260
Target Start/End: Original strand, 40709290 - 40709445
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaatt 202  Q
    |||||||||||||| ||  | |||||| ||||||| ||||| ||| |  ||| ||| ||||||||||||| | | |||||||||| |||||| |||||||    
T  40709290 ttagggtgtgtttggatttaaggtttaagaggggaagggagaggaggacttacttttcttttttaaattacgaatattataaaataatttttagaaaatt 40709389  T
Q  203 gaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     ||||||| | |||  |||||||||||||||||||||||||||||||| |||| ||||    
T  40709390 aaattaacgatatg--ataaatgatcatataatacttcaaaaacacttaatttctttt 40709445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 140 - 260
Target Start/End: Complemental strand, 1344757 - 1344639
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatactt 239  Q
    |||||||||  |||||||| ||||||||||||| ||||||| ||||||||||||| ||||||||||  |||||||||  |||||| | |||||| ||| |    
T  1344757 ggaggggaaaatttatttttcttttttaaattacggacattgtaaaatgatttttagaaaattgaaccaacaacatg--ataaataaacatatattacat 1344660  T
Q  240 caaaaacacttcatttatttt 260  Q
    ||||||||||| |||| ||||    
T  1344659 caaaaacacttaatttttttt 1344639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 101 - 260
Target Start/End: Original strand, 40094929 - 40095086
Alignment:
Q  101 tcttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa 200  Q
    |||||||||||||||| |||||||||||||||||||| || |||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||| | ||||    
T  40094929 tcttagggtgtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacggacactatgaaatg-ttttataaaaa 40095027  T
Q  201 ttgaattaa-caacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
     | ||  ||  ||||||  ||||| ||||||||||||||||||  |||||| |||||||||    
T  40095028 gttaacaaattaacatg--ataaacgatcatataatacttcaatcacacttaatttatttt 40095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 259
Target Start/End: Original strand, 40287310 - 40287407
Alignment:
Q  159 ccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    |||||||||||||| ||||||| | |||||| |||| ||||||||||||||||| || |||  |||||| |||||||||||||||||||||| |||||||    
T  40287310 ccttttttaaatta-ggacattgtgaaatgagttttagaaaattgaattaacaaaatcata--aatgattatataatacttcaaaaacacttaatttatt 40287406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 107 - 178
Target Start/End: Complemental strand, 12234252 - 12234181
Alignment:
Q  107 ggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||| |||||||||||||||||||| ||||||||| |||||| ||| | ||||||||||| |||||    
T  12234252 ggtgtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacggaca 12234181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 525156 - 525252
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    ||||||||||||| |||||| ||||||| |||||| |||| |||||||||||| ||||||  |||||| ||||||||||||||| | |||| ||||||||    
T  525156 cttttttaaattacggacat-ataaaataatttttagaaa-ttgaattaacaatatgata--aatgattatataatacttcaaacaaacttaatttattt 525251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 260
Target Start/End: Complemental strand, 30010576 - 30010423
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| ||||||||||||| |||||| ||||||||| |||||| ||| | |||| |||||| ||||| ||  ||||| |||||  | | || |    
T  30010576 agggtgtgtttggatggagggtttagaaggggaagggaggggagggtttacttttcattttgaaattacggacactacgaaatgttttttaaatagttaa 30010477  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
      ||  |||||  |||||| ||||||||||||||||||  |||||| |||||||||    
T  30010476 catattaacat--tataaacgatcatataatacttcaaccacacttaatttatttt 30010423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 177
Target Start/End: Original strand, 30010329 - 30010404
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    ||||||||||||||| || ||||||||||||||||| ||||||||| | |||| ||| ||| ||||||||| ||||    
T  30010329 cttagggtgtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggac 30010404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 290 - 337
Target Start/End: Complemental strand, 40709339 - 40709292
Alignment:
Q  290 agtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  40709339 agtcctcctctcccttcccctcttaaaccttaaatccaaacacaccct 40709292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 337
Target Start/End: Complemental strand, 30010377 - 30010332
Alignment:
Q  292 tcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||    
T  30010377 tcctcccctcccttcccctcctaaaccctcaatccaaacacaccct 30010332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 103 - 188
Target Start/End: Original strand, 38509892 - 38509977
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 188  Q
    |||||||||||||| || ||||||||||||||||| ||||| ||| |||| | ||| | ||||||||||| ||||| ||| |||||    
T  38509892 ttagggtgtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacggacactatgaaatg 38509977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 174
Target Start/End: Original strand, 41498404 - 41498473
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatg 174  Q
    |||||||||||| || ||||||||||||||||| | ||||||| |||||| ||| | |||||||||||||    
T  41498404 agggtgtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatg 41498473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 103 - 195
Target Start/End: Original strand, 2470728 - 2470820
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttttt 195  Q
    |||||||||||||| |||||||||||||||||||| | ||  ||| |||||  ||| | ||||||||||| | ||| ||||||||| ||||||    
T  2470728 ttagggtgtgtttggatggagggtttaggaggggaagagaatggagggtttcgtttacatttttaaattacgaacactataaaatgttttttt 2470820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 2858931 - 2858999
Alignment:
Q  104 tagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    ||||||||||||| |||||||||||||||||| | ||||||||| |||||| ||| | ||| |||||||    
T  2858931 tagggtgtgtttggatggagggtttaggagggaaagggaggggagggtttacttttcatttctaaatta 2858999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 177
Target Start/End: Original strand, 12234010 - 12234082
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || ||||||||||||||||| ||||||| | || ||| ||| ||||||||||||| ||||    
T  12234010 agggtgtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggac 12234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 26324058 - 26324014
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||    
T  26324058 cctcccctcccttcccctcctaaaccctcaatccaaacacaccct 26324014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 20607220 - 20607263
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggg 145  Q
    |||||||||||||||||| ||||||||||||||||| |||||||    
T  20607220 cttagggtgtgtttgaattgagggtttaggaggggaagggaggg 20607263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 258
Target Start/End: Complemental strand, 17622689 - 17622630
Alignment:
Q  197 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatt 258  Q
    ||||||||||||| |||||||||  | ||||||||||||||||| ||||||||| |||||||    
T  17622689 aaaattgaattaataacatgata--agtgatcatataatacttctaaaacacttaatttatt 17622630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 33643318 - 33643268
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||| |||| |||||||||||| ||||||||||||| |||||||||||    
T  33643318 gtgagtcatcccttcccttcccctcctaaaccttcaatctaaacacaccct 33643268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 35349466 - 35349537
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    |||||||||||| |||||||||||| ||||||||||  ||||| |||||| ||| | ||||||||||| |||||    
T  35349466 agggtgtgtttggatggagggtttaagaggggaggg--ggggagggtttacttttcatttttaaattacggaca 35349537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 35349708 - 35349634
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||| ||  |||||||| ||||||| ||||||||| |||||| ||| | ||||||||||| ||||    
T  35349708 ttagggtgtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggac 35349634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 41498651 - 41498565
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggagggg-aggggaggggaaggtttattttccttttttaaattatggacattataaaatg 188  Q
    |||||||||||||| |||||| |||||||||||| | ||||||||| | |||| ||| | ||||||||||| ||||| ||| |||||    
T  41498651 ttagggtgtgtttggatggagagtttaggaggggtaagggaggggaggatttacttttcatttttaaattacggacactatgaaatg 41498565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 105 - 219
Target Start/End: Complemental strand, 47261515 - 47261401
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| |||| || ||||| |||||| | ||||| | |||||| ||| |||||||||| || ||||| ||||||||   |||||  |||||||    
T  47261515 agggtgtgtttggatgggggatttagaaggggaagagagggtagggtttaattttcttttttaaagtacggacactataaaatacatttttttaaattga 47261416  T
Q  205 attaacaacatgata 219  Q
    | ||| |||||||||    
T  47261415 aataaaaacatgata 47261401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 51303434 - 51303384
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||| ||||||| |||||| ||||||||||||||||||    
T  51303434 gtgagccctcccctcccctcccctcctaaaccctcaatccaaacacaccct 51303384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 293 - 330
Target Start/End: Original strand, 2859132 - 2859169
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaac 330  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  2859132 cctcccctcccttcccctcctaaaccttcaatccaaac 2859169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 38510135 - 38510074
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaa 169  Q
    ||||||||| ||  |||||||||||||||| ||||||||| |||||| ||| ||||||||||    
T  38510135 gtgtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaa 38510074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 50079496 - 50079537
Alignment:
Q  219 ataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  50079496 ataaatgatcatataatactttaaaaacacttaatttatttt 50079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 52707834 - 52707736
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||   ||||||| |||| ||||||| |||| |  | |||||||||||||  |||||| ||||||||||||||||| || | ||||||||    
T  52707834 cttttttaaattaccaacattatcaaataatttttttaaaaatttaataacaacatgata--aatgatgatataatacttcaaaaatacataatttattt 52707737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 259
Target Start/End: Complemental strand, 8530039 - 8529891
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaa-ttgaatt 207  Q
    |||||||| ||| || ||||||||||||| |||||| ||| ||||| ||| | ||||||||||| ||||| ||| |||| ||||||| |||| || |  |    
T  8530039 tgtgtttggatgaagagtttaggaggggaagggaggtgaaagtttacttttcatttttaaattacggacactatgaaat-attttttaaaaagttaacat 8529941  T
Q  208 aacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |  ||||||   |||| ||||||||||||||||||  |||||| ||||||||    
T  8529940 attaacatg--gtaaacgatcatataatacttcaatcacacttaatttattt 8529891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 12234050 - 12234010
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  12234050 ccctcccttcccctcctaaaccctcaatccaaacacaccct 12234010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 178
Target Start/End: Original strand, 20576130 - 20576206
Alignment:
Q  102 cttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggaca 178  Q
    ||||| ||||||||| || ||||||||||||||||| |||||||||  |||||  || | ||||||||||| |||||    
T  20576130 cttagagtgtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacggaca 20576206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 20607417 - 20607461
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| || |||||||||||||||    
T  20607417 cctcccctcccttcccctcctaaaccctccatccaaacacaccct 20607461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 35349662 - 35349706
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||| |||||| | ||||||||||||||||    
T  35349662 cctcccctcccttcccctcataaacccttaatccaaacacaccct 35349706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 41498448 - 41498404
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||    
T  41498448 cctcccctcacttcccctcctaaaccctcaatccaaacacaccct 41498404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 140 - 171
Target Start/End: Complemental strand, 49832753 - 49832722
Alignment:
Q  140 ggaggggaaggtttattttccttttttaaatt 171  Q
    ||||||||||||||||||||||||||||||||    
T  49832753 ggaggggaaggtttattttccttttttaaatt 49832722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Original strand, 1085684 - 1085734
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||| || |||||||||||||| |||||| || |||||||||||||||    
T  1085684 gtgagtcatctcctcccttcccctcctaaaccctctatccaaacacaccct 1085734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 194
Target Start/End: Complemental strand, 7444736 - 7444650
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttt 194  Q
    ||||||||| ||| || |||||| | |||| | ||||||| |||||| ||| | |||| |||||| ||||| |||||||||||||||    
T  7444736 gtgtgtttggatgaagagtttagaaagggaagagaggggagggtttagttttcattttaaaattacggacactataaaatgattttt 7444650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 335
Target Start/End: Original strand, 12234210 - 12234252
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacacc 335  Q
    ||||||||||||||||||| |||||| || |||||||||||||    
T  12234210 cctcccctcccttcccctcctaaaccctccatccaaacacacc 12234252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 147
Target Start/End: Original strand, 26324014 - 26324056
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggagggga 147  Q
    |||||||||||| || ||||||||||||||||| |||||||||    
T  26324014 agggtgtgtttggattgagggtttaggaggggaagggagggga 26324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 103 - 177
Target Start/End: Complemental strand, 32951564 - 32951490
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||| || ||| ||||||||| ||| |||||||||  ||||| ||| | ||||||||||| ||||    
T  32951564 ttagggtgtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggac 32951490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 287 - 337
Target Start/End: Complemental strand, 35927864 - 35927814
Alignment:
Q  287 gtgagtcctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| |||||||||| |||||||| |||| | ||||||||||||||||||    
T  35927864 gtgagccctcccctccattcccctcctaaaacctcaatccaaacacaccct 35927814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 1085736 - 1085695
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggagg 144  Q
    |||||||||||||| || ||||||||||||||||| ||||||    
T  1085736 ttagggtgtgtttggatagagggtttaggaggggaagggagg 1085695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 2859157 - 2859104
Alignment:
Q  124 ggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||||| ||||||||| |||||| |||  |||||||||||| ||||    
T  2859157 ggtttaggaggggaagggaggggagggtttacttttattttttaaattacggac 2859104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 103 - 172
Target Start/End: Complemental strand, 28770967 - 28770898
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||||| ||||| |||||||||||| |  |||| ||| ||||||||||   |||||||||||    
T  28770967 ttagggtgtgtttggatggaaggtttaggagggaaaaggagtggagggtttattttttatttttaaatta 28770898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Original strand, 38510094 - 38510135
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    ||||||||||||||||||| |||||| | |||||||||||||    
T  38510094 cctcccctcccttcccctcctaaacccttaatccaaacacac 38510135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 44210943 - 44211058
Alignment:
Q  141 gaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttc 240  Q
    ||||||| |||||| ||| | ||||||||||||||||   || ||||| | | |  |||||| || |||||||||||||  || ||||||||||||||||    
T  44210943 gaggggagggtttacttttcgtttttaaattatggacc--atgaaatgttctctaaaaaattaaaataacaacatgata--aacgatcatataatacttc 44211038  T
Q  241 aaaaacacttcatttatttt 260  Q
    ||  |||||| |||||||||    
T  44211039 aatcacacttaatttatttt 44211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 2858976 - 2858932
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||| ||||| |||||| || |||||||||||||||    
T  2858976 cctcccctccctttccctcctaaaccctccatccaaacacaccct 2858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 139
Target Start/End: Complemental strand, 10392114 - 10392078
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggagg 139  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  10392114 ttaggctgtgtttggatggagggtttaggaggggagg 10392078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 20576176 - 20576136
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||| |||||| || ||||||||||||    
T  20576176 ctcccctcccttcccctcctaaaccctctatccaaacacac 20576136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 337
Target Start/End: Complemental strand, 20607263 - 20607223
Alignment:
Q  297 ccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||| |||||| ||||| ||||||||||||    
T  20607263 ccctcccttcccctcctaaaccctcaattcaaacacaccct 20607223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 30010532 - 30010576
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||||||||  |||||| || |||||||||||||||    
T  30010532 cctcccctcccttccccttctaaaccctccatccaaacacaccct 30010576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 109 - 141
Target Start/End: Original strand, 35512638 - 35512670
Alignment:
Q  109 tgtgtttgaatggagggtttaggaggggagggg 141  Q
    |||||||| ||||||||||||||||||||||||    
T  35512638 tgtgtttggatggagggtttaggaggggagggg 35512670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 333
Target Start/End: Original strand, 35512997 - 35513037
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacaca 333  Q
    ||||||||||||||||||| |||||| || |||||||||||    
T  35512997 cctcccctcccttcccctcctaaaccctccatccaaacaca 35513037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 38509938 - 38509894
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||| ||||||||||||| |||||| || |||||||||||||||    
T  38509938 cctcctctcccttcccctcctaaaccctctatccaaacacaccct 38509894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 40094977 - 40094933
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||| |||||||||| |||||| || |||||||||||||||    
T  40094977 cctccccttccttcccctcctaaaccctccatccaaacacaccct 40094933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 104 - 260
Target Start/End: Complemental strand, 242461 - 242307
Alignment:
Q  104 tagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattg 203  Q
    |||| |||||||| ||||| ||||||  |||||| ||||||||| |||||| ||| ||||||||||||| |||||||||||||||||||||  |||||||    
T  242461 taggctgtgtttggatggatggtttataaggggaagggaggggagggtttacttttcttttttaaattacggacattataaaatgatttttaaaaaattg 242362  T
Q  204 aattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||| |||||  ||||||||| |||||||| |||||||| ||||||||||||||    
T  242361 aattaacgacatg--ataaatgatgatataataattcaaaaatacttcatttatttt 242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 105 - 250
Target Start/End: Complemental strand, 17782 - 17641
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattga 204  Q
    |||||||||||| |||||||||||||||| ||| ||||||||  |||||| ||| |||||||||||||   | |||||||||||||||||||||||||||    
T  17782 agggtgtgtttggatggagggtttaggagtggaagggagggg--ggtttacttttcttttttaaattacaaatattataaaatgattttttgaaaattga 17685  T
Q  205 attaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    |||| |||||||  |||||| |||||||||||||||||| ||||||    
T  17684 attagcaacatg--ataaataatcatataatacttcaaatacactt 17641  T

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Target: scaffold0071 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 53074 - 52977
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||  |||||||||||||||||| ||||||||||||| || |||||    
T  53074 cttttttaaattatgggcattatgaaatgattttttgaaaattgaactaacaacatg--ataaatgatcatataatatttcaaaaacacttaatgtattt 52977  T

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Target: scaffold0095 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 135 - 257
Target Start/End: Complemental strand, 8361 - 8241
Alignment:
Q  135 ggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataa 234  Q
    ||||||||||||| || |||  |||||||||||| |||  ||| ||||||||| ||||||  ||||||||||||||||||||  || |||||||||||||    
T  8361 ggaggggaggggagggcttacattccttttttaatttaaagacgttataaaattatttttaaaaaattgaattaacaacatg--attaatgatcatataa 8264  T
Q  235 tacttcaaaaacacttcatttat 257  Q
    ||||||||||||| || ||||||    
T  8263 tacttcaaaaacagttaatttat 8241  T

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Target: scaffold0026 (Bit Score: 53; Significance: 2e-21; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 259
Target Start/End: Original strand, 1452 - 1549
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||| |  |||||||||| |||||||||| |||||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| ||||||||    
T  1452 cttttttaaactgcggacattatagaatgatttttagaaaattgaattaacaacttg--ataaatgatcatataatacttaaaaaatacttaatttattt 1549  T

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Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 177
Target Start/End: Original strand, 1175 - 1244
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    ||||||||| || ||||||||||||||||| | |||||||  ||||| ||| ||||||||||||| ||||    
T  1175 gtgtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggac 1244  T

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Target: scaffold0026; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 1215 - 1175
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||| ||||||||| |||||| |||||||||||||||    
T  1215 ctcccctctcttcccctcctaaaccctcaatccaaacacac 1175  T

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Target: scaffold0026; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 1642 - 1554
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 193  Q
    ||||||||||||||| ||||||||||||| |||  |||||||| || | | |||  |||||||||||| | ||| | ||||||| ||||    
T  1642 agggtgtgtttgaattgagggtttaggagaggaatggaggggagggctcacttttattttttaaattacgaacaatgtaaaatgttttt 1554  T

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Target: scaffold0119 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 160 - 260
Target Start/End: Complemental strand, 37572 - 37474
Alignment:
Q  160 cttttttaaattatggacattataaaatgattttttgaaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttattt 259  Q
    |||||||||||||  |||| ||||| ||||||||| ||||| | |||||||||||||  |||| ||||||||||| ||||||||||||||| ||||||||    
T  37572 cttttttaaattacagacaatataagatgatttttagaaaacttaattaacaacatg--ataagtgatcatataacacttcaaaaacacttgatttattt 37475  T

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Target: scaffold0067 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 39184 - 39320
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggagggga-ggggaaggtttattttccttttttaaattatggacattataaaatgattttttgaaaat 201  Q
    |||||||||||||| ||||||||||||||||||||   || ||||| |||||| ||| | ||||||||||| ||||| ||| ||||| |||||  ||| |    
T  39184 ttagggtgtgtttggatggagggtttaggaggggaaatgagggggagggtttacttttcatttttaaattacggacactatgaaatgttttttaaaaagt 39283  T
Q  202 tgaattaacaacatgatataaatgatcatataatacttc 240  Q
    | |  ||  ||||||  ||||||||||||||||||||||    
T  39284 taacatattaacatg--ataaatgatcatataatacttc 39320  T

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Target: scaffold0067; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 177
Target Start/End: Complemental strand, 39434 - 39362
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggac 177  Q
    |||||||||||| || |||||||||| |||| | ||||||||| |||||| ||| ||||||||||||| ||||    
T  39434 agggtgtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggac 39362  T

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Target: scaffold0067; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 337
Target Start/End: Original strand, 39390 - 39434
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    ||||||||||||| ||||  |||||| ||||||||||||||||||    
T  39390 cctcccctccctttcccttctaaaccctcaatccaaacacaccct 39434  T

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Target: scaffold0262 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 188
Target Start/End: Original strand, 16296 - 16379
Alignment:
Q  105 agggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatg 188  Q
    ||||| |||||| |||||||||||||||||| |  |||||||| |||||| ||| | ||||||||||||| ||| ||| |||||    
T  16296 agggtttgtttggatggagggtttaggagggaaaaggaggggagggtttacttttcatttttaaattatgaacactatgaaatg 16379  T

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Target: scaffold1414 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1414
Description:

Target: scaffold1414; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 473 - 402
Alignment:
Q  178 attataaaatgattttttgaaaattgaa-ttaacaacatgatataaatgatcatataatacttcaaaaacactt 250  Q
    ||||||||||||||||| ||||||| || |||||| |||||||  |||||| ||| ||||||||||||||||||    
T  473 attataaaatgatttttagaaaattaaaattaacagcatgata--aatgataataaaatacttcaaaaacactt 402  T

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Target: scaffold0198 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 3150 - 3235
Alignment:
Q  108 gtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaattatggacattataaaatgatttt 193  Q
    ||||||||| || ||| ||||||||||||| |||||||||  ||||| ||| |||||||||||||  |||| ||| ||||| ||||    
T  3150 gtgtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattacagacactatgaaatgttttt 3235  T

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Target: scaffold0198; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 294 - 334
Target Start/End: Complemental strand, 3190 - 3150
Alignment:
Q  294 ctcccctcccttcccctcttaaaccttcaatccaaacacac 334  Q
    |||||||||||||||||| |||||  |||||||||||||||    
T  3190 ctcccctcccttcccctcctaaactctcaatccaaacacac 3150  T

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Target: scaffold0096 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 172
Target Start/End: Original strand, 6582 - 6651
Alignment:
Q  103 ttagggtgtgtttgaatggagggtttaggaggggaggggaggggaaggtttattttccttttttaaatta 172  Q
    |||||||||||||| || || | ||||||||| || ||||||||| |||||| ||| |||||||||||||    
T  6582 ttagggtgtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaatta 6651  T

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Target: scaffold0096; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 337
Target Start/End: Complemental strand, 6628 - 6584
Alignment:
Q  293 cctcccctcccttcccctcttaaaccttcaatccaaacacaccct 337  Q
    |||||||||||||| |||| |||| ||||||||||||||||||||    
T  6628 cctcccctcccttctcctcctaaaacttcaatccaaacacaccct 6584  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 260
Target Start/End: Original strand, 81503 - 81564
Alignment:
Q  197 aaaattgaattaacaacatgatataaatgatcatataatacttcaaaaacacttcatttatttt 260  Q
    ||||||||| ||| |||||||||  |||||||||||||||||||||  | |||| |||||||||    
T  81503 aaaattgaaataataacatgata--aatgatcatataatacttcaatcatacttgatttatttt 81564  T

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