View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13388_low_5 (Length: 248)
Name: NF13388_low_5
Description: NF13388
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13388_low_5 |
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Alignment Details
Target: chr7 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 45043793 - 45044028
Alignment:
| Q |
1 |
aataataccgtgtgttgcatcgatagtaaaggaaacatctacaaagccaattccaataatatgattaaaatgtaagtaaaataataacaaatcaataaat |
100 |
Q |
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| T |
45043793 |
aataataccgtgtgttgcatcgatagtaaaggaaacatctacaaagccaattccaataatatgattaaaatgtaagtaaaatattaacaaatcaataaat |
45043892 |
T |
|
| Q |
101 |
cgatttgcatagaccaattacagaacataaaatgttagacannnnnnnggctacaagtatacaattaataactcaatttaatcgctttaattgatttttc |
200 |
Q |
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|||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
45043893 |
cgatttgcatagaccaattacagaccataaaatgttagacatttttttggctacaagtatacaactaataactcaatttaatcgctttaattgatttttc |
45043992 |
T |
|
| Q |
201 |
tcaagatttatcagtttatttcattagggtttgatt |
236 |
Q |
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|||||||||||||||||||||||||||||||||||| |
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| T |
45043993 |
tcaagatttatcagtttatttcattagggtttgatt |
45044028 |
T |
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