View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13389_high_8 (Length: 468)

Name: NF13389_high_8
Description: NF13389
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13389_high_8
NF13389_high_8
[»] chr1 (138 HSPs)
chr1 (220-468)||(11891897-11892145)
chr1 (220-462)||(11905508-11905750)
chr1 (220-455)||(11882711-11882946)
chr1 (220-404)||(52818440-52818624)
chr1 (17-104)||(11905305-11905392)
chr1 (17-102)||(11882364-11882449)
chr1 (17-102)||(11891598-11891683)
chr1 (17-104)||(11882460-11882547)
chr1 (17-104)||(11891694-11891781)
chr1 (17-102)||(11905449-11905534)
chr1 (17-104)||(52818788-52818875)
chr1 (17-102)||(11905257-11905342)
chr1 (17-101)||(52818599-52818683)
chr1 (17-102)||(11882412-11882497)
chr1 (17-102)||(11882604-11882689)
chr1 (17-102)||(11891646-11891731)
chr1 (17-102)||(11891838-11891923)
chr1 (17-102)||(11882316-11882401)
chr1 (25-102)||(11882660-11882737)
chr1 (17-102)||(11891550-11891635)
chr1 (220-387)||(11882471-11882638)
chr1 (220-387)||(11891705-11891872)
chr1 (232-381)||(11880174-11880323)
chr1 (25-102)||(11889615-11889692)
chr1 (325-381)||(11905325-11905381)
chr1 (31-102)||(11880069-11880140)
chr1 (43-102)||(11880177-11880236)
chr1 (43-102)||(11880273-11880332)
chr1 (43-102)||(11902773-11902832)
chr1 (220-387)||(11905316-11905483)
chr1 (325-387)||(11882384-11882446)
chr1 (325-387)||(11891618-11891680)
chr1 (325-387)||(52818601-52818663)
chr1 (232-381)||(11902674-11902823)
chr1 (17-98)||(52818554-52818635)
chr1 (25-102)||(52818838-52818915)
chr1 (28-101)||(52821338-52821411)
chr1 (220-284)||(11882663-11882727)
chr1 (37-93)||(11892002-11892058)
chr1 (327-387)||(11905279-11905339)
chr1 (43-102)||(11879793-11879852)
chr1 (226-381)||(11880072-11880227)
chr1 (232-387)||(11902578-11902733)
chr1 (43-102)||(11902581-11902640)
chr1 (43-102)||(11902677-11902736)
chr1 (31-101)||(11879664-11879734)
chr1 (331-381)||(11888193-11888243)
chr1 (331-381)||(11888241-11888291)
chr1 (331-381)||(11888289-11888339)
chr1 (331-381)||(11888337-11888387)
chr1 (331-381)||(11888385-11888435)
chr1 (331-381)||(11888433-11888483)
chr1 (331-381)||(11888481-11888531)
chr1 (331-381)||(11888529-11888579)
chr1 (331-381)||(11888577-11888627)
chr1 (331-381)||(11888625-11888675)
chr1 (331-381)||(11888673-11888723)
chr1 (331-381)||(11888721-11888771)
chr1 (331-381)||(11888769-11888819)
chr1 (331-381)||(11888817-11888867)
chr1 (331-381)||(11888865-11888915)
chr1 (331-381)||(11888913-11888963)
chr1 (331-381)||(11888961-11889011)
chr1 (331-381)||(11889009-11889059)
chr1 (331-381)||(11889057-11889107)
chr1 (331-381)||(11889105-11889155)
chr1 (331-381)||(11889153-11889203)
chr1 (331-381)||(11889201-11889251)
chr1 (331-381)||(11889249-11889299)
chr1 (331-381)||(11889297-11889347)
chr1 (331-381)||(11889345-11889395)
chr1 (331-381)||(11889393-11889443)
chr1 (331-381)||(11889441-11889491)
chr1 (331-381)||(11889489-11889539)
chr1 (17-95)||(11904969-11905047)
chr1 (394-464)||(52818287-52818357)
chr1 (17-95)||(52819085-52819163)
chr1 (28-101)||(11879613-11879686)
chr1 (17-102)||(11882508-11882593)
chr1 (25-98)||(11882708-11882781)
chr1 (37-98)||(11882816-11882877)
chr1 (17-102)||(11888215-11888300)
chr1 (17-102)||(11888263-11888348)
chr1 (17-102)||(11888311-11888396)
chr1 (17-102)||(11888359-11888444)
chr1 (17-102)||(11888407-11888492)
chr1 (17-102)||(11888455-11888540)
chr1 (17-102)||(11888503-11888588)
chr1 (17-102)||(11888551-11888636)
chr1 (17-102)||(11888599-11888684)
chr1 (17-102)||(11888647-11888732)
chr1 (17-102)||(11888695-11888780)
chr1 (17-102)||(11888743-11888828)
chr1 (17-102)||(11888791-11888876)
chr1 (17-102)||(11888839-11888924)
chr1 (17-102)||(11888887-11888972)
chr1 (17-102)||(11888935-11889020)
chr1 (17-102)||(11888983-11889068)
chr1 (17-102)||(11889031-11889116)
chr1 (17-102)||(11889079-11889164)
chr1 (17-102)||(11889127-11889212)
chr1 (17-102)||(11889175-11889260)
chr1 (17-102)||(11889223-11889308)
chr1 (17-102)||(11889271-11889356)
chr1 (17-102)||(11889319-11889404)
chr1 (17-102)||(11889367-11889452)
chr1 (17-102)||(11889415-11889500)
chr1 (17-102)||(11889463-11889548)
chr1 (17-102)||(11891742-11891827)
chr1 (220-284)||(11882423-11882487)
chr1 (220-284)||(11891657-11891721)
chr1 (25-89)||(11891894-11891958)
chr1 (17-101)||(11904921-11905005)
chr1 (25-89)||(11905505-11905569)
chr1 (37-89)||(11905613-11905665)
chr1 (325-381)||(52818799-52818855)
chr1 (43-102)||(11879937-11879996)
chr1 (31-102)||(11905175-11905246)
chr1 (325-387)||(11882336-11882398)
chr1 (325-387)||(11882432-11882494)
chr1 (43-101)||(11889777-11889835)
chr1 (325-387)||(11891570-11891632)
chr1 (325-387)||(11891666-11891728)
chr1 (325-387)||(11905469-11905531)
chr1 (331-377)||(52818851-52818897)
chr1 (17-95)||(52818941-52819019)
chr1 (28-98)||(52821293-52821363)
chr1 (25-102)||(11879823-11879900)
chr1 (328-381)||(11889630-11889683)
chr1 (28-101)||(11902305-11902378)
chr1 (17-102)||(11905209-11905294)
chr1 (28-101)||(52821098-52821171)
chr1 (229-281)||(11882336-11882388)
chr1 (331-371)||(11889537-11889577)
chr1 (331-387)||(11889777-11889833)
chr1 (229-281)||(11891570-11891622)
chr1 (17-77)||(52818911-52818971)
chr1 (17-101)||(52821434-52821518)
[»] scaffold1918 (1 HSPs)
scaffold1918 (34-101)||(7-74)
[»] chr4 (1 HSPs)
chr4 (241-285)||(24482211-24482255)


Alignment Details
Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 138)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 220 - 468
Target Start/End: Original strand, 11891897 - 11892145
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11891897 tcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctccttatcactatcaaagtcctcctcccccatctcccattt 11891996  T
Q  320 ctcatcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattacgtgagtcctcccccaccagtaaagtcacctcc 419  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11891997 ctcatcctcccaactactacaaatcccctccaccaccatcgccatctcctccacctccataccattacgtgagtcctcccccaccagtaaagtcacctcc 11892096  T
Q  420 accaccagcttacatctatgcttctccaccaccaccaatctacaactag 468  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  11892097 accaccagcttacatctatgcttctccaccaccaccaatctacaactag 11892145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 220 - 462
Target Start/End: Original strand, 11905508 - 11905750
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11905508 tcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 11905607  T
Q  320 ctcatcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattacgtgagtcctcccccaccagtaaagtcacctcc 419  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  11905608 ctcatcctccctactactacaaatcccctccaccaccgtctccatctcctccacctccgtaccattacgtgagtcctcccccaccagtaaagtctcctcc 11905707  T
Q  420 accaccagcttacatctatgcttctccaccaccaccaatctac 462  Q
    |||| ||| |||| | |||||||||||||||||||| ||||||    
T  11905708 accatcagtttacgtttatgcttctccaccaccacccatctac 11905750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 220 - 455
Target Start/End: Original strand, 11882711 - 11882946
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  11882711 tcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctccttaccactatcaaagtcctcctccaccatctcccattt 11882810  T
Q  320 ctcatcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattacgtgagtcctcccccaccagtaaagtcacctcc 419  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  11882811 ctcatcctccctactactacaaatcccctccaccaccatcgccgtctcctccacctccttaccactatgtgagtcctcccccaccagtaaagtcacctcc 11882910  T
Q  420 accaccagcttacatctatgcttctccaccaccacc 455  Q
    ||||||| |||| ||||||||||| |||||||||||    
T  11882911 accaccaacttatatctatgcttcaccaccaccacc 11882946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 220 - 404
Target Start/End: Complemental strand, 52818624 - 52818440
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||| |||||||||||||||||||| || ||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |     
T  52818624 tcacctccacctccttactattacaagtcacctccacctccatctccatctccaccacctccttattactatcaaagtcctcctccaccatctcccactc 52818525  T
Q  320 ctcatcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattacgtgagtcctcccccacc 404  Q
    ||||| |||||||| ||||||||||||||||||||||| || | |||||||||||||| |||||||| |||||||| ||||||||    
T  52818524 ctcatactccctaccactacaaatcccctccaccaccaacggcgtctcctccacctccttaccattatgtgagtccccccccacc 52818440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 11905305 - 11905392
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaag 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11905305 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaag 11905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11882364 - 11882449
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  11882364 caccatcaccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcacctccccctccatactattacaaa 11882449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11891598 - 11891683
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  11891598 caccatcaccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcacctccccctccatactattacaaa 11891683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 11882460 - 11882547
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaag 104  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  11882460 caccatcaccatcaccaccacctccttactattacaaatcacctccaccaccatccccatcaccaccacctccatactactacaaaag 11882547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 17 - 104
Target Start/End: Original strand, 11891694 - 11891781
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaag 104  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  11891694 caccatcaccatcaccaccacctccttactattacaaatcacctccaccaccatccccatcaccaccacctccatactactacaaaag 11891781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11905449 - 11905534
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| ||||||    
T  11905449 caccatcaccatcaccaccccctccctactattacaaatcacctccaccaccgtcaccatcaccgccacctccttactattacaaa 11905534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 52818875 - 52818788
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaag 104  Q
    ||||||| ||||| ||||||||||| || || ||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||    
T  52818875 caccatcaccatctccaccacctccttattactacaaatcacctccaccaccaaccccatcacctccacctccatactactacaaaag 52818788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11905257 - 11905342
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| |||||||||| || ||||||||||||||||||||||||||||||||| ||||| || |||||||| ||||| ||||||    
T  11905257 caccatccccatcaccacaacatccctactattacaaatcacctccaccaccatcgccatcaccaccacctccctactattacaaa 11905342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 52818683 - 52818599
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    |||||||||| || ||||||||||||||||| ||||||||||||||||||||||| || || ||||||||||| ||||| |||||    
T  52818683 caccatcgccttctccaccacctccctactactacaaatcacctccaccaccatccccgtcacctccacctccttactattacaa 52818599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11882412 - 11882497
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||||    
T  11882412 caccatcaccatcacctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccttactattacaaa 11882497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11882604 - 11882689
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||| || |||||||| || |||||||| ||||| ||||||    
T  11882604 caccatcaccatccccaccccctccctactattacaaatcacctccacctccctcaccatcaccgccacctccttactattacaaa 11882689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11891646 - 11891731
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| |||||||| || ||||| |||||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||||    
T  11891646 caccatcaccatcacctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccttactattacaaa 11891731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11891838 - 11891923
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||| || |||||||| || |||||||| ||||| ||||||    
T  11891838 caccatcaccatccccaccccctccctactattacaaatcacctccacctccctcaccatcaccgccacctccttactattacaaa 11891923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11882316 - 11882401
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||| || || ||||| |||||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||||    
T  11882316 caccatcaccatcccctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccctactattacaaa 11882401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 11882660 - 11882737
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||| |||||||| ||||||||||||||||||||||| || |||||||| || |||||||| ||||| ||||||    
T  11882660 ccatcaccgccacctccttactattacaaatcacctccacctccctcaccatcaccgccacctccttactattacaaa 11882737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11891550 - 11891635
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||| || || ||||| |||||||||||||| |||||||||||||||||||| || |||||||| ||||| ||||||    
T  11891550 caccatcaccatcccctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccctactattacaaa 11891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 387
Target Start/End: Original strand, 11882471 - 11882638
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||| ||||||||||||||||||||||| ||  |||| ||||| ||||| ||||||||||| ||  ||||  ||||||| ||||||||||||||   |     
T  11882471 tcaccaccacctccttactattacaaatcacctccaccaccatccccatcaccaccacctccatactactacaaaagtccccctccaccatctccatctc 11882570  T
Q  320 ct-catcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    || ||||| || || ||||||||||| || ||||||||||| ||||| || || ||||| ||| |||||    
T  11882571 ctccatcc-ccatattactacaaatctccaccaccaccatcaccatccccaccccctccctactattac 11882638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 220 - 387
Target Start/End: Original strand, 11891705 - 11891872
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||| ||||||||||||||||||||||| ||  |||| ||||| ||||| ||||||||||| ||  ||||  ||||||| ||||||||||||||   |     
T  11891705 tcaccaccacctccttactattacaaatcacctccaccaccatccccatcaccaccacctccatactactacaaaagtccccctccaccatctccatctc 11891804  T
Q  320 ct-catcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    || ||||| || || ||||||||||| || ||||||||||| ||||| || || ||||| ||| |||||    
T  11891805 ctccatcc-ccatattactacaaatctccaccaccaccatcaccatccccaccccctccctactattac 11891872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 11880174 - 11880323
Alignment:
Q  232 ccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccatttctcatcctccct 331  Q
    ||||||||||||||||||||| |||| || || |||||||| ||||| || ||  ||||  ||  ||||||||| |||||||| ||| | | | | || |    
T  11880174 ccttactattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaatctcctcctcctccatctcctattccccgtacacctt 11880273  T
Q  332 actactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    |||| |||||||| || |||||||| || |||||||||||||| ||||||    
T  11880274 actattacaaatctcccccaccaccttcaccatctcctccaccaccatac 11880323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 11889615 - 11889692
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||| || ||||| |||||||| || |||||||| |||||||| |||||||| |||||||| |||||||||||||||    
T  11889615 ccatctcccccaccaccctactactataaatcacccccaccaccttcaccatctcctccaccaccatactactacaaa 11889692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 11905325 - 11905381
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||| |||||||| |||||||||||||| ||||| |||||||||||||||    
T  11905325 cctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatac 11905381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 11880069 - 11880140
Alignment:
Q  31 ccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||| || ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||||||||||    
T  11880069 ccaccaccaccttactattacaagtctcctcccccaccttcaccatctcctccaccaccatactactacaaa 11880140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11880177 - 11880236
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||    
T  11880177 tactattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaa 11880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11880273 - 11880332
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||    
T  11880273 tactattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaa 11880332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11902773 - 11902832
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||||||| || |||||||| |||||||| |||||||| |||||||||||||||    
T  11902773 tactattacaaatctcccccaccaccttcaccatctcctccaccaccatactactacaaa 11902832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 220 - 387
Target Start/End: Original strand, 11905316 - 11905483
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccattt 319  Q
    ||||| |||||||| |||||||||||||| ||  |||| ||||| ||||| || |||||||| ||  ||||  |||| || |||||||| ||||||  |     
T  11905316 tcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaaagcccccctccaccttctccctctc 11905415  T
Q  320 ctcatcctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||| ||| || || ||||||||||| || ||||||||||| ||||| || || ||||| ||| |||||    
T  11905416 ctcctcccccatattactacaaatctccaccaccaccatcaccatcaccaccccctccctactattac 11905483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11882384 - 11882446
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| |||||    
T  11882384 cctccctactattacaaatcacctccaccaccatcaccatcacctccccctccatactattac 11882446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11891618 - 11891680
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||||||||| |||||||| |||||||||||||| ||||| ||||| ||||||||| |||||    
T  11891618 cctccctactattacaaatcacctccaccaccatcaccatcacctccccctccatactattac 11891680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 387
Target Start/End: Complemental strand, 52818663 - 52818601
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    |||||||||||||||||||| |||||||||||||| || || ||||||||||| ||| |||||    
T  52818663 cctccctactactacaaatcacctccaccaccatccccgtcacctccacctccttactattac 52818601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 232 - 381
Target Start/End: Original strand, 11902674 - 11902823
Alignment:
Q  232 ccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccatttctcatcctccct 331  Q
    ||||||||||||||||||||| |||| || || |||||||| ||||| || ||  | ||  ||  ||||||||| |||||||| ||| | | | | || |    
T  11902674 ccttactattacaaatctcccccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcctccatctcctattccccgtacacctt 11902773  T
Q  332 actactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    |||| |||||||| || |||||||| || |||||||||||||| ||||||    
T  11902774 actattacaaatctcccccaccaccttcaccatctcctccaccaccatac 11902823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 52818635 - 52818554
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactacta 98  Q
    ||||||| || ||||| |||||||| ||||||||||| ||||||||||| ||||| ||||| || |||||||| || |||||    
T  52818635 caccatccccgtcacctccacctccttactattacaagtcacctccacctccatctccatctccaccacctccttattacta 52818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 102
Target Start/End: Complemental strand, 52818915 - 52818838
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||| ||||| || || ||||||||| |||| |||||||||||||||||||| || |||||||| || |||||||||    
T  52818915 ccatccccacctccaccgtactattaccaatcccctccaccaccatcaccatctccaccacctccttattactacaaa 52818838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 52821411 - 52821338
Alignment:
Q  28 tcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| || || || ||||||||||| |||||||||||    
T  52821411 tcacctccacctccttactactacaagtcacctccaccaccctctccctcacctccacctccttactactacaa 52821338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 11882663 - 11882727
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctcctta 284  Q
    ||||||||||||||||||||||||||||| ||  ||||||| || ||||| || |||||||||||    
T  11882663 tcaccgccacctccttactattacaaatcacctccacctccctcaccatcaccgccacctcctta 11882727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 11892002 - 11892058
Alignment:
Q  37 cctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatac 93  Q
    |||||| |||| |||||||| |||||||||||||| ||||| |||||||||||||||    
T  11892002 cctcccaactactacaaatcccctccaccaccatcgccatctcctccacctccatac 11892058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 11905279 - 11905339
Alignment:
Q  327 tccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||||||| |||||||| |||||||||||||||||||| || |||||||| ||| |||||    
T  11905279 tccctactattacaaatcacctccaccaccatcgccatcaccaccacctccctactattac 11905339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11879793 - 11879852
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||||||| || || |||||||| |||||||| |||||||| |||||||||||||||    
T  11879793 tactattacaagtccccaccaccaccttcaccatctcctccaccaccatactactacaaa 11879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 226 - 381
Target Start/End: Original strand, 11880072 - 11880227
Alignment:
Q  226 ccacctccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccatttctcatc 325  Q
    ||||| |||||||||||||| |||||  | || || || |||||||| ||||| || ||  ||||  ||  ||||||||| |||||||| ||| | |||     
T  11880072 ccaccaccttactattacaagtctcctcccccaccttcaccatctcctccaccaccatactactacaaatctcctcctcctccatctcctattccccata 11880171  T
Q  326 ctccctactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    | || ||||| |||||||| || |||||||| || |||||||||||||| ||||||    
T  11880172 caccttactattacaaatctcccccaccaccttcaccatctcctccaccaccatac 11880227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 232 - 387
Target Start/End: Original strand, 11902578 - 11902733
Alignment:
Q  232 ccttactattacaaatctccctcacctccatctccatctccaccacctccttatcactatcaaagtcctcctccaccatctcccatttctcatcctccct 331  Q
    |||||||||||||| |||||  |||| || || |||||||| ||||| || ||  | ||  ||  ||||||||| |||||||| ||| | ||| | || |    
T  11902578 ccttactattacaagtctcctccaccaccttcaccatctcctccaccaccatactattacaaatctcctcctcctccatctcctattccccatacacctt 11902677  T
Q  332 actactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    |||| |||||||| || |||||||| || |||||||||||||| |||||| |||||    
T  11902678 actattacaaatctcccccaccaccttcaccatctcctccaccaccatactattac 11902733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11902581 - 11902640
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||||||| || ||||||||||| |||||||| |||||||| |||||||| ||||||    
T  11902581 tactattacaagtctcctccaccaccttcaccatctcctccaccaccatactattacaaa 11902640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11902677 - 11902736
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||||||| || |||||||| |||||||| |||||||| |||||||| ||||||    
T  11902677 tactattacaaatctcccccaccaccttcaccatctcctccaccaccatactattacaaa 11902736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 101
Target Start/End: Original strand, 11879664 - 11879734
Alignment:
Q  31 ccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    |||||||| || ||||||||||| || |||||||||||||| || || |||||||| ||||| ||||||||    
T  11879664 ccaccaccaccatactattacaagtctcctccaccaccatctccctcacctccaccaccatattactacaa 11879734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888193 - 11888243
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888193 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888241 - 11888291
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888241 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888289 - 11888339
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888289 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888337 - 11888387
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888337 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888385 - 11888435
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888385 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888433 - 11888483
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888433 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888481 - 11888531
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888481 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888529 - 11888579
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888529 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888577 - 11888627
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888577 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888625 - 11888675
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888625 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888673 - 11888723
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888673 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888721 - 11888771
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888721 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888769 - 11888819
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888769 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888817 - 11888867
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888817 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888865 - 11888915
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888865 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888913 - 11888963
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888913 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11888963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11888961 - 11889011
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11888961 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889009 - 11889059
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889009 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889057 - 11889107
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889057 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889105 - 11889155
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889105 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889153 - 11889203
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889153 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889201 - 11889251
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889201 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889249 - 11889299
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889249 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889297 - 11889347
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889297 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889345 - 11889395
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889345 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889393 - 11889443
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889393 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889441 - 11889491
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889441 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 381
Target Start/End: Original strand, 11889489 - 11889539
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||||||||| || ||||||||||| ||||||||||| ||||||    
T  11889489 tactactacaaatccccacctccaccatcgccttctcctccaccaccatac 11889539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Original strand, 11904969 - 11905047
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatacta 95  Q
    ||||||| ||||| |||||||| || ||||||||||| ||||| || |||||||| ||||| ||||| || ||||||||    
T  11904969 caccatcaccatctccaccaccaccatactattacaagtcaccacctccaccatctccatctcctcctccaccatacta 11905047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 464
Target Start/End: Complemental strand, 52818357 - 52818287
Alignment:
Q  394 cctcccccaccagtaaagtcacctccaccaccagcttacatctatgcttctccaccaccaccaatctacaa 464  Q
    |||||||||||| | || |||||||| || |||| |||||| |||||||| ||||||||||| ||||||||    
T  52818357 cctcccccaccaatgaaatcacctcctccgccagtttacatttatgcttccccaccaccacctatctacaa 52818287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 52819163 - 52819085
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatacta 95  Q
    ||||||| |||||||| || ||||| |||||||||||||| || ||||| ||||||||||| || || || ||||||||    
T  52819163 caccatccccatcacctccccctccatactattacaaatctcccccaccgccatcaccatccccacctccaccatacta 52819085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 11879613 - 11879686
Alignment:
Q  28 tcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||| |||||||| ||||| |||||||| ||||||||||| ||||| || || ||||| |||||||| |||||    
T  11879613 tcacctccacctccttactactacaaatctcctccaccaccctcaccttccccaccaccaccatactattacaa 11879686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11882508 - 11882593
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||||||||||||||| ||||| ||||||   || || |||||||| ||||| |||||| | ||||| |||||||||    
T  11882508 caccatccccatcaccaccacctccatactactacaaaagtccccctccaccatctccatctcctccatccccatattactacaaa 11882593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 25 - 98
Target Start/End: Original strand, 11882708 - 11882781
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactacta 98  Q
    |||||||| |||||||| |||||||||||||| || ||||| ||||| ||||| || |||||||| ||| ||||    
T  11882708 ccatcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctccttaccacta 11882781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 98
Target Start/End: Original strand, 11882816 - 11882877
Alignment:
Q  37 cctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactacta 98  Q
    ||||||||||| |||||||| |||||||||||||| || || ||||||||||| ||| ||||    
T  11882816 cctccctactactacaaatcccctccaccaccatcgccgtctcctccacctccttaccacta 11882877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888215 - 11888300
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888215 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888263 - 11888348
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888263 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888311 - 11888396
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888311 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888359 - 11888444
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888359 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888407 - 11888492
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888407 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888455 - 11888540
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888455 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888503 - 11888588
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888503 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888551 - 11888636
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888551 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888599 - 11888684
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888599 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888647 - 11888732
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888647 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888695 - 11888780
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888695 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888743 - 11888828
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888743 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888791 - 11888876
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888791 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888839 - 11888924
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888839 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888887 - 11888972
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888887 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11888972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888935 - 11889020
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888935 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11888983 - 11889068
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11888983 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889031 - 11889116
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889031 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889079 - 11889164
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889079 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889127 - 11889212
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889127 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889175 - 11889260
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889175 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889223 - 11889308
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889223 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889271 - 11889356
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889271 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889319 - 11889404
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889319 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889367 - 11889452
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889367 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889415 - 11889500
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889415 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11889463 - 11889548
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||||| || || ||||| || ||||| |||||||| || || |||||||| || || |||||||| |||||||||||||||    
T  11889463 caccatcgccttctcctccaccaccatactactacaaatccccacctccaccatcgccttctcctccaccaccatactactacaaa 11889548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11891742 - 11891827
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||||||||||||||| ||||| ||||||   || || |||||||| ||||| |||||| | ||||| |||||||||    
T  11891742 caccatccccatcaccaccacctccatactactacaaaagtccccctccaccatctccatctcctccatccccatattactacaaa 11891827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 11882423 - 11882487
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctcctta 284  Q
    ||||| || ||||| |||||||||||||||||  |||| ||||| ||||| ||||||||||||||    
T  11882423 tcacctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctcctta 11882487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 220 - 284
Target Start/End: Original strand, 11891657 - 11891721
Alignment:
Q  220 tcaccgccacctccttactattacaaatctccctcacctccatctccatctccaccacctcctta 284  Q
    ||||| || ||||| |||||||||||||||||  |||| ||||| ||||| ||||||||||||||    
T  11891657 tcacctccccctccatactattacaaatctcctccaccaccatcaccatcaccaccacctcctta 11891721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 11891894 - 11891958
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctcc 89  Q
    |||||||| |||||||| |||||||||||||| || ||||| ||||| ||||| || ||||||||    
T  11891894 ccatcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctcc 11891958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 11904921 - 11905005
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||||| |||||||| || || || ||||||||||| || || || |||||||||||||| || ||||| |||||||| |||||    
T  11904921 caccatccccatcacctcctccaccatactattacaagtccccccctccaccatcaccatctccaccaccaccatactattacaa 11905005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 89
Target Start/End: Original strand, 11905505 - 11905569
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctcc 89  Q
    |||||||| |||||||| |||||||||||||| || ||||| ||||| ||||| || ||||||||    
T  11905505 ccatcaccgccacctccttactattacaaatctcccccacctccatctccatctccaccacctcc 11905569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 11905613 - 11905665
Alignment:
Q  37 cctccctactattacaaatcacctccaccaccatcaccatcgcctccacctcc 89  Q
    ||||||||||| |||||||| ||||||||||| || ||||| |||||||||||    
T  11905613 cctccctactactacaaatcccctccaccaccgtctccatctcctccacctcc 11905665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 52818855 - 52818799
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||| || ||||||||||| |||||||||||| | ||||| |||||||||||||||    
T  52818855 cctccttattactacaaatcacctccaccaccaaccccatcacctccacctccatac 52818799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 102
Target Start/End: Original strand, 11879937 - 11879996
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||| |||||||| || ||||| || |||||||| |||||||| |||||||||||||||    
T  11879937 tactactacaaatctcccccacccccttcaccatctcctccaccaccatactactacaaa 11879996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 102
Target Start/End: Original strand, 11905175 - 11905246
Alignment:
Q  31 ccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    |||||||| || |||||||| || ||||| || |||||||||||||| ||||| |||||||| || ||||||    
T  11905175 ccaccaccaccttactattataagtcaccacccccaccatcaccatcccctccccctccatattattacaaa 11905246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11882336 - 11882398
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||| ||||| |||||||| |||||||||||||| ||||| || |||||||| ||| |||||    
T  11882336 cctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccctactattac 11882398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11882432 - 11882494
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||| ||||| |||||||| |||||||||||||| ||||| || |||||||| ||| |||||    
T  11882432 cctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccttactattac 11882494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 11889777 - 11889835
Alignment:
Q  43 tactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||||||||| || || |||||||| |||||||| |||||||| |||||||| |||||    
T  11889777 tactattacaagtccccaccaccaccttcaccatctcctccaccaccatactattacaa 11889835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11891570 - 11891632
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||| ||||| |||||||| |||||||||||||| ||||| || |||||||| ||| |||||    
T  11891570 cctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccctactattac 11891632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #123
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11891666 - 11891728
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||| ||||| |||||||| |||||||||||||| ||||| || |||||||| ||| |||||    
T  11891666 cctccatactattacaaatctcctccaccaccatcaccatcaccaccacctccttactattac 11891728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #124
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 387
Target Start/End: Original strand, 11905469 - 11905531
Alignment:
Q  325 cctccctactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||||||||| |||||||| ||||||||||| || ||||| || |||||||| ||| |||||    
T  11905469 cctccctactattacaaatcacctccaccaccgtcaccatcaccgccacctccttactattac 11905531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #125
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 377
Target Start/End: Complemental strand, 52818897 - 52818851
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctcc 377  Q
    ||||| ||| ||||||||||||||||||| |||||||| ||||||||    
T  52818897 tactattaccaatcccctccaccaccatcaccatctccaccacctcc 52818851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #126
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 52819019 - 52818941
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatacta 95  Q
    ||||||| ||||| || || || || |||||||| || ||||| || |||||||||||||| ||||| |||||||||||    
T  52819019 caccatcaccatcccctcctccaccatactattataagtcaccacctccaccatcaccatcccctccccctccatacta 52818941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #127
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 28 - 98
Target Start/End: Complemental strand, 52821363 - 52821293
Alignment:
Q  28 tcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactacta 98  Q
    ||||| |||||||| ||||| ||||| |||||||||||||| ||||| || ||||| || || ||||||||    
T  52821363 tcacctccacctccttactactacaagtcacctccaccaccttcaccttcacctcctccaccttactacta 52821293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #128
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 102
Target Start/End: Original strand, 11879823 - 11879900
Alignment:
Q  25 ccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||| || ||||| || ||||| |||||||| || ||||| || ||||| || |||||||| |||||||||||||||    
T  11879823 ccatctcctccaccaccatactactacaaatctcccccacccccttcaccgtctcctccaccaccatactactacaaa 11879900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #129
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 381
Target Start/End: Original strand, 11889630 - 11889683
Alignment:
Q  328 ccctactactacaaatcccctccaccaccatcgccatctcctccacctccatac 381  Q
    ||||||||||| ||||| || |||||||| || |||||||||||||| ||||||    
T  11889630 ccctactactataaatcacccccaccaccttcaccatctcctccaccaccatac 11889683  T

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Target: chr1; HSP #130
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Original strand, 11902305 - 11902378
Alignment:
Q  28 tcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||| |||||||| ||||| || ||||| ||||||||||| ||||| || ||||| || |||||||| |||||    
T  11902305 tcacctccacctccttactactataaatcgcctccaccaccctcaccttcccctcccccaccatactattacaa 11902378  T

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Target: chr1; HSP #131
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 102
Target Start/End: Original strand, 11905209 - 11905294
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaaa 102  Q
    ||||||| ||||| || || ||||| || ||||||||||| |||||||||||||| ||||| || | || ||| ||||| ||||||    
T  11905209 caccatcaccatcccctccccctccatattattacaaatctcctccaccaccatccccatcaccacaacatccctactattacaaa 11905294  T

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Target: chr1; HSP #132
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 101
Target Start/End: Complemental strand, 52821171 - 52821098
Alignment:
Q  28 tcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||| ||||| || ||||| ||||| || ||||||||||| || || || ||||||||||| |||||||||||    
T  52821171 tcacctccaccaccttactactacaagtctcctccaccaccctctccctcacctccacctccttactactacaa 52821098  T

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Target: chr1; HSP #133
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 11882336 - 11882388
Alignment:
Q  229 cctccttactattacaaatctccctcacctccatctccatctccaccacctcc 281  Q
    ||||| |||||||||||||||||  |||| ||||| ||||| |||||||||||    
T  11882336 cctccatactattacaaatctcctccaccaccatcaccatcaccaccacctcc 11882388  T

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Target: chr1; HSP #134
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 371
Target Start/End: Original strand, 11889537 - 11889577
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctcc 371  Q
    ||||||||||||||||| || ||||||||||| ||||||||    
T  11889537 tactactacaaatccccacctccaccatcgccttctcctcc 11889577  T

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Target: chr1; HSP #135
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 387
Target Start/End: Original strand, 11889777 - 11889833
Alignment:
Q  331 tactactacaaatcccctccaccaccatcgccatctcctccacctccataccattac 387  Q
    ||||| ||||| ||||| |||||||| || |||||||||||||| |||||| |||||    
T  11889777 tactattacaagtccccaccaccaccttcaccatctcctccaccaccatactattac 11889833  T

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Target: chr1; HSP #136
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 11891570 - 11891622
Alignment:
Q  229 cctccttactattacaaatctccctcacctccatctccatctccaccacctcc 281  Q
    ||||| |||||||||||||||||  |||| ||||| ||||| |||||||||||    
T  11891570 cctccatactattacaaatctcctccaccaccatcaccatcaccaccacctcc 11891622  T

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Target: chr1; HSP #137
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 52818971 - 52818911
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatc 77  Q
    ||||||| ||||| || || ||||| |||||||| ||||| ||||||||||| ||||||||    
T  52818971 caccatcaccatcccctccccctccatactattataaatctcctccaccaccctcaccatc 52818911  T

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Target: chr1; HSP #138
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 52821518 - 52821434
Alignment:
Q  17 caccatcgccatcaccaccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||||| || ||||| |||||||| ||||| || ||||| || |||||||| || || || |||||||| || |||||||||||    
T  52821518 caccatctccctcacccccacctccttactactataaatctccaccaccaccctctccctcacctccaccaccttactactacaa 52821434  T

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Target: scaffold1918 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1918
Description:

Target: scaffold1918; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 74 - 7
Alignment:
Q  34 ccacctccctactattacaaatcacctccaccaccatcaccatcgcctccacctccatactactacaa 101  Q
    ||||| || |||||||||||||| || ||||||||||| || || |||||||||||||||||||||||    
T  74 ccaccaccttactattacaaatctccaccaccaccatctccctcacctccacctccatactactacaa 7  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 241 - 285
Target Start/End: Complemental strand, 24482255 - 24482211
Alignment:
Q  241 tacaaatctccctcacctccatctccatctccaccacctccttat 285  Q
    |||||||||||  |||| ||||||||||| |||||||||||||||    
T  24482255 tacaaatctccaccaccaccatctccatcaccaccacctccttat 24482211  T

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