View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13390_high_10 (Length: 274)

Name: NF13390_high_10
Description: NF13390
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13390_high_10
NF13390_high_10
[»] chr7 (23 HSPs)
chr7 (25-149)||(8792725-8792849)
chr7 (199-266)||(4974735-4974802)
chr7 (204-266)||(15577850-15577912)
chr7 (204-266)||(42611814-42611876)
chr7 (204-266)||(45637715-45637777)
chr7 (204-266)||(15329276-15329338)
chr7 (204-266)||(48880927-48880989)
chr7 (199-264)||(24394970-24395035)
chr7 (198-266)||(34482832-34482900)
chr7 (204-266)||(3961982-3962044)
chr7 (204-266)||(35444561-35444623)
chr7 (200-265)||(36790467-36790532)
chr7 (204-266)||(25167850-25167912)
chr7 (204-266)||(37477080-37477142)
chr7 (199-266)||(15238380-15238447)
chr7 (199-254)||(20010109-20010164)
chr7 (204-266)||(18036981-18037043)
chr7 (205-266)||(29737143-29737204)
chr7 (205-266)||(25167655-25167715)
chr7 (205-266)||(48880726-48880786)
chr7 (204-266)||(42696086-42696148)
chr7 (229-266)||(30848597-30848634)
chr7 (205-266)||(30848775-30848835)
[»] chr4 (36 HSPs)
chr4 (197-266)||(49387888-49387957)
chr4 (199-266)||(22199259-22199326)
chr4 (204-266)||(10442789-10442851)
chr4 (204-266)||(31078819-31078881)
chr4 (204-264)||(36072950-36073010)
chr4 (199-266)||(2624835-2624902)
chr4 (204-266)||(7745112-7745174)
chr4 (204-266)||(21802322-21802384)
chr4 (204-266)||(24128242-24128304)
chr4 (204-266)||(33530688-33530750)
chr4 (204-266)||(47290069-47290131)
chr4 (205-266)||(36073354-36073415)
chr4 (204-264)||(4751449-4751509)
chr4 (204-266)||(24392670-24392732)
chr4 (204-266)||(44893429-44893491)
chr4 (199-266)||(46441842-46441909)
chr4 (204-266)||(53123033-53123096)
chr4 (204-266)||(23964465-23964527)
chr4 (204-266)||(50156578-50156640)
chr4 (204-263)||(37934944-37935003)
chr4 (207-266)||(42671675-42671734)
chr4 (204-266)||(44893213-44893276)
chr4 (205-266)||(25063373-25063434)
chr4 (199-266)||(9089076-9089142)
chr4 (229-266)||(9088898-9088935)
chr4 (205-266)||(36073555-36073615)
chr4 (213-266)||(37219837-37219890)
chr4 (205-266)||(46442050-46442110)
chr4 (205-266)||(53123237-53123297)
chr4 (205-266)||(10442586-10442646)
chr4 (205-266)||(11314050-11314111)
chr4 (233-266)||(17655462-17655495)
chr4 (205-266)||(31078618-31078678)
chr4 (213-266)||(42671874-42671927)
chr4 (205-266)||(44893012-44893072)
chr4 (205-266)||(44893632-44893692)
[»] chr8 (45 HSPs)
chr8 (204-266)||(32064748-32064810)
chr8 (204-266)||(34665385-34665447)
chr8 (199-266)||(32393856-32393923)
chr8 (204-266)||(17841850-17841912)
chr8 (204-266)||(20091801-20091863)
chr8 (204-266)||(24211553-24211615)
chr8 (204-266)||(40780129-40780191)
chr8 (204-266)||(42755042-42755104)
chr8 (204-265)||(15187563-15187624)
chr8 (209-266)||(38016979-38017036)
chr8 (198-266)||(8453831-8453899)
chr8 (199-266)||(35353039-35353106)
chr8 (204-266)||(1645965-1646027)
chr8 (204-266)||(14128867-14128929)
chr8 (204-266)||(26042116-26042178)
chr8 (205-266)||(37986055-37986116)
chr8 (204-266)||(27782117-27782179)
chr8 (204-266)||(31347782-31347844)
chr8 (204-266)||(39772801-39772863)
chr8 (204-266)||(6108233-6108295)
chr8 (204-266)||(7017865-7017927)
chr8 (204-266)||(37132658-37132720)
chr8 (206-266)||(25581239-25581299)
chr8 (211-266)||(7021988-7022043)
chr8 (204-266)||(30835047-30835108)
chr8 (204-266)||(41819778-41819840)
chr8 (205-266)||(3890413-3890474)
chr8 (204-266)||(27835453-27835515)
chr8 (205-266)||(1503642-1503702)
chr8 (205-266)||(17841649-17841709)
chr8 (205-266)||(26041912-26041972)
chr8 (205-266)||(40779928-40779988)
chr8 (213-264)||(1886621-1886672)
chr8 (205-255)||(24844869-24844919)
chr8 (212-266)||(35353247-35353300)
chr8 (229-266)||(3890616-3890653)
chr8 (205-266)||(10044554-10044614)
chr8 (205-266)||(14129065-14129125)
chr8 (205-266)||(20091600-20091660)
chr8 (204-245)||(30055546-30055587)
chr8 (205-266)||(31347575-31347635)
chr8 (205-266)||(34665587-34665647)
chr8 (205-266)||(37132479-37132540)
chr8 (205-266)||(37985855-37985915)
chr8 (229-265)||(3597042-3597078)
[»] chr6 (19 HSPs)
chr6 (204-266)||(33695327-33695389)
chr6 (204-266)||(33696699-33696761)
chr6 (204-266)||(6127278-6127340)
chr6 (204-266)||(18365573-18365635)
chr6 (204-266)||(18370837-18370899)
chr6 (204-266)||(23291084-23291146)
chr6 (199-266)||(17176021-17176088)
chr6 (204-266)||(17705465-17705527)
chr6 (204-266)||(25986933-25986995)
chr6 (204-266)||(28675151-28675213)
chr6 (204-265)||(18889698-18889758)
chr6 (202-266)||(8515725-8515789)
chr6 (207-266)||(11548588-11548647)
chr6 (204-266)||(6031741-6031803)
chr6 (212-266)||(32702216-32702270)
chr6 (205-265)||(29693652-29693712)
chr6 (204-266)||(2309423-2309485)
chr6 (204-266)||(9752245-9752306)
chr6 (205-266)||(34238886-34238946)
[»] chr1 (31 HSPs)
chr1 (204-266)||(40214991-40215053)
chr1 (205-266)||(16045798-16045859)
chr1 (199-266)||(9910293-9910360)
chr1 (204-266)||(44094701-44094763)
chr1 (201-266)||(3559617-3559682)
chr1 (199-266)||(36966708-36966775)
chr1 (204-266)||(18404445-18404507)
chr1 (204-266)||(19015407-19015469)
chr1 (204-266)||(25463679-25463741)
chr1 (204-266)||(37821834-37821896)
chr1 (199-266)||(6883485-6883552)
chr1 (204-266)||(41876442-41876504)
chr1 (199-264)||(32000269-32000334)
chr1 (204-266)||(25973417-25973478)
chr1 (204-266)||(40273705-40273767)
chr1 (204-266)||(34519761-34519823)
chr1 (205-266)||(19015610-19015670)
chr1 (213-266)||(44690828-44690881)
chr1 (205-266)||(51737711-51737771)
chr1 (205-263)||(6883696-6883753)
chr1 (204-238)||(51620983-51621017)
chr1 (205-263)||(52064376-52064434)
chr1 (213-266)||(9910098-9910150)
chr1 (205-266)||(20304929-20304989)
chr1 (204-266)||(27523255-27523319)
chr1 (205-266)||(32000065-32000125)
chr1 (205-266)||(33786430-33786490)
chr1 (205-266)||(33786635-33786695)
chr1 (205-266)||(40215194-40215254)
chr1 (205-266)||(40273914-40273974)
chr1 (212-265)||(44691030-44691083)
[»] chr3 (41 HSPs)
chr3 (197-266)||(30385007-30385076)
chr3 (199-266)||(6041882-6041949)
chr3 (199-266)||(37217053-37217120)
chr3 (204-266)||(2754720-2754782)
chr3 (204-266)||(3574527-3574589)
chr3 (204-265)||(11347271-11347332)
chr3 (199-266)||(3456062-3456129)
chr3 (199-266)||(48160903-48160970)
chr3 (204-266)||(3137414-3137476)
chr3 (204-266)||(33113796-33113858)
chr3 (204-266)||(9797029-9797091)
chr3 (204-266)||(19650900-19650962)
chr3 (204-266)||(22426344-22426406)
chr3 (204-266)||(34482910-34482972)
chr3 (204-255)||(42297356-42297407)
chr3 (204-266)||(8320584-8320646)
chr3 (204-266)||(33145716-33145777)
chr3 (204-266)||(37522056-37522118)
chr3 (204-266)||(24343550-24343612)
chr3 (204-266)||(36865027-36865089)
chr3 (213-265)||(47738117-47738169)
chr3 (199-266)||(8362045-8362112)
chr3 (207-262)||(41224239-41224294)
chr3 (212-255)||(42921154-42921197)
chr3 (210-264)||(26612794-26612848)
chr3 (204-238)||(40327878-40327912)
chr3 (205-266)||(3137213-3137273)
chr3 (205-266)||(34482687-34482747)
chr3 (205-266)||(40328037-40328098)
chr3 (213-266)||(46919100-46919153)
chr3 (213-266)||(47738317-47738370)
chr3 (210-266)||(33839741-33839797)
chr3 (204-266)||(33839534-33839596)
chr3 (205-266)||(22426144-22426204)
chr3 (205-266)||(30385606-30385666)
chr3 (205-266)||(33114000-33114060)
chr3 (205-266)||(36864831-36864892)
chr3 (205-266)||(37522259-37522319)
chr3 (205-266)||(41224440-41224500)
chr3 (229-266)||(41883223-41883260)
chr3 (204-232)||(47402630-47402658)
[»] chr5 (28 HSPs)
chr5 (199-266)||(11361131-11361198)
chr5 (204-266)||(2477639-2477701)
chr5 (204-266)||(6043511-6043573)
chr5 (205-266)||(8145379-8145440)
chr5 (204-264)||(3362781-3362841)
chr5 (204-264)||(12850804-12850864)
chr5 (204-264)||(38899728-38899788)
chr5 (199-266)||(3522006-3522073)
chr5 (199-266)||(22913054-22913121)
chr5 (199-266)||(33584329-33584396)
chr5 (204-266)||(4892205-4892267)
chr5 (204-266)||(14138671-14138733)
chr5 (204-266)||(25398241-25398303)
chr5 (199-266)||(4434007-4434074)
chr5 (204-266)||(37321793-37321856)
chr5 (199-266)||(17545685-17545752)
chr5 (204-266)||(12614733-12614795)
chr5 (213-266)||(10458409-10458462)
chr5 (205-266)||(25398444-25398504)
chr5 (205-256)||(27481830-27481881)
chr5 (205-266)||(4892408-4892468)
chr5 (205-266)||(33584128-33584188)
chr5 (205-264)||(12851010-12851068)
chr5 (205-264)||(38899524-38899583)
chr5 (205-266)||(3521806-3521866)
chr5 (205-266)||(6043311-6043371)
chr5 (205-266)||(8145579-8145639)
chr5 (205-266)||(22912856-22912916)
[»] chr2 (21 HSPs)
chr2 (199-266)||(21936079-21936146)
chr2 (204-266)||(9293576-9293638)
chr2 (204-266)||(10661890-10661952)
chr2 (204-266)||(23268062-23268124)
chr2 (204-266)||(35160760-35160822)
chr2 (201-266)||(31174834-31174899)
chr2 (204-265)||(13354849-13354910)
chr2 (204-266)||(7475508-7475570)
chr2 (204-266)||(14941366-14941428)
chr2 (204-266)||(33380210-33380272)
chr2 (204-266)||(43330915-43330977)
chr2 (204-266)||(21393688-21393750)
chr2 (204-266)||(9723408-9723470)
chr2 (204-266)||(27847635-27847697)
chr2 (200-238)||(40262714-40262752)
chr2 (213-266)||(22591494-22591547)
chr2 (205-266)||(22592918-22592979)
chr2 (205-266)||(33380413-33380473)
chr2 (205-266)||(35160965-35161025)
chr2 (229-266)||(3989104-3989141)
chr2 (205-266)||(23267861-23267921)
[»] scaffold0471 (1 HSPs)
scaffold0471 (204-266)||(12845-12907)
[»] scaffold0178 (1 HSPs)
scaffold0178 (204-266)||(11624-11686)
[»] scaffold0096 (1 HSPs)
scaffold0096 (204-266)||(41014-41076)
[»] scaffold0085 (1 HSPs)
scaffold0085 (204-266)||(47853-47915)
[»] scaffold0665 (1 HSPs)
scaffold0665 (204-266)||(3071-3133)
[»] scaffold0228 (5 HSPs)
scaffold0228 (212-266)||(8413-8467)
scaffold0228 (212-266)||(15995-16049)
scaffold0228 (212-266)||(25947-26001)
scaffold0228 (205-266)||(16190-16250)
scaffold0228 (205-266)||(26142-26202)
[»] scaffold0204 (1 HSPs)
scaffold0204 (204-266)||(4399-4461)


Alignment Details
Target: chr7 (Bit Score: 117; Significance: 1e-59; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 25 - 149
Target Start/End: Complemental strand, 8792849 - 8792725
Alignment:
Q  25 tagggtaaatcaaggaaatctgcaacgagagatttgagggagccttccgtaaaagttggaaaaaatcaactgttattcctagggcaattacatggtaagg 124  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8792849 tagggtaaatcaaggaaatctgcaacgagagatttgagggagccttccataaaagttggaaaaaatcaactgttattcctacggcaattacatggtaagg 8792750  T
Q  125 ccaattttcaagttggtgacttata 149  Q
    |||||||||||||||||||||||||    
T  8792749 ccaattttcaagttggtgacttata 8792725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 4974802 - 4974735
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4974802 atgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 4974735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 15577912 - 15577850
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15577912 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 15577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 42611814 - 42611876
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42611814 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42611876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 45637715 - 45637777
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45637715 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 45637777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 15329276 - 15329338
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  15329276 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 15329338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 48880989 - 48880927
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  48880989 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 48880927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 24394970 - 24395035
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  24394970 atgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataa 24395035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 34482832 - 34482900
Alignment:
Q  198 gatgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  34482832 gatgagcaatgctatatatcaagaaagattttattaagaaaattttaagaatgacatggcagaataatc 34482900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 3961982 - 3962044
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  3961982 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 3962044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 35444561 - 35444623
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  35444561 caatgctatatattaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 35444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 265
Target Start/End: Complemental strand, 36790532 - 36790467
Alignment:
Q  200 tgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    ||||||||||||||||||||||||| |||||||||||||| || || |||||||||||||||||||    
T  36790532 tgaacaatgctatatatcaagaaagtttttatcaagaaaaatttaagaatgacatggcagaataat 36790467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 25167912 - 25167850
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| | |||||||||| || ||||||||||||||||||||    
T  25167912 caatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 25167850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 37477142 - 37477080
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  37477142 caatgctatatatcaagaaagattttctcaagaaaaatttaagaatgacatggcagaataatc 37477080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 15238380 - 15238447
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||| | ||| ||||||||| ||||| ||||||||||||||||||||    
T  15238380 atgagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 15238447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 199 - 254
Target Start/End: Complemental strand, 20010164 - 20010109
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacat 254  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  20010164 atgagcaatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacat 20010109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 18036981 - 18037043
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||| ||||||||| || || ||||||||||||||||||||    
T  18036981 caatgatatatatcaagaaagattttttcaagaaaaatttaagaatgacatggcagaataatc 18037043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 29737143 - 29737204
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||| | |||||||||| || |||||||||| |||||||||    
T  29737143 aatgctatatatcaagaaagatttttttaagaaaattttaagaatgacatggtagaataatc 29737204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 25167655 - 25167715
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  25167655 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 25167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 48880726 - 48880786
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  48880726 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 48880786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 42696086 - 42696148
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||||| || ||  ||| || |||||||| |||||||||||    
T  42696086 caatgttatatatcaagaaagattttattaaaaattttttaagaatgacatagcagaataatc 42696148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 30848597 - 30848634
Alignment:
Q  229 tatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||| || ||||||||||||||||||||    
T  30848597 tatcaagaaaattttaagaatgacatggcagaataatc 30848634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 30848835 - 30848775
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| | |||||| ||||||| ||||| |||||||||||| |||||||    
T  30848835 aatgctagatatcaagaatgcttttat-aagaaaaattcaagaatgacatggcacaataatc 30848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 7e-27; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 197 - 266
Target Start/End: Complemental strand, 49387957 - 49387888
Alignment:
Q  197 agatgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49387957 agatgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 49387888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 22199259 - 22199326
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  22199259 atgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 22199326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 10442851 - 10442789
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10442851 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 10442789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 31078881 - 31078819
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  31078881 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 31078819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 36072950 - 36073010
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  36072950 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataa 36073010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 2624835 - 2624902
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2624835 atgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgaaatggcagaataatc 2624902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 7745174 - 7745112
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  7745174 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 7745112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 21802384 - 21802322
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  21802384 caatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 21802322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 24128242 - 24128304
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  24128242 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 24128304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 33530750 - 33530688
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  33530750 caatgctatatatcaagaaagattttatcaagaaaaattcaagaatgacatggcagaataatc 33530688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 47290069 - 47290131
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  47290069 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 47290131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 36073354 - 36073415
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36073354 aatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 36073415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 4751449 - 4751509
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  4751449 caatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 4751509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 24392670 - 24392732
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  24392670 caatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 24392732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 44893429 - 44893491
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  44893429 caatgctatatatcaagaaagattttttcaaaaaaatttcaagaatgacatggcagaataatc 44893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 46441842 - 46441909
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||| |||||||    
T  46441842 atgagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgacatggcaaaataatc 46441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 53123033 - 53123096
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaa-gaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||    
T  53123033 caatgctatatatcaagaaagattttttcaaagaaaatttcaagaatgacatggcagaataatc 53123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 23964527 - 23964465
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  23964527 caatgttatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 23964465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 50156640 - 50156578
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||| |||||||||||| || ||||||||||||||||||||    
T  50156640 caatgctatatattaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 50156578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 37935003 - 37934944
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaata 263  Q
    |||||||||||||||| |||||||||||||| ||||| |||| |||||||||| ||||||    
T  37935003 caatgctatatatcaaaaaagattttatcaaaaaaatgtcaagaatgacatggtagaata 37934944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 207 - 266
Target Start/End: Original strand, 42671675 - 42671734
Alignment:
Q  207 tgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||||| |||| || || ||||||||||||||||||||    
T  42671675 tgctatatatcaataaagattttatcaaaaaaaatttaagaatgacatggcagaataatc 42671734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 44893276 - 44893213
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaa-tttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||| |||| |||| |||||| ||||||||||||||||||||    
T  44893276 caatgctatatattaagaaagattttttcaaaaaaaatttcaagaatgacatggcagaataatc 44893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 25063373 - 25063434
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||||  ||||| |||||||||| |||||||||    
T  25063373 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatggtagaataatc 25063434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 9089142 - 9089076
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  9089142 atgaaaaatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9089076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 9088898 - 9088935
Alignment:
Q  229 tatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  9088898 tatcaagaaaatttcaagaatgacatggcagaataatc 9088935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 36073615 - 36073555
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  36073615 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 36073555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 37219890 - 37219837
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||| |||||||||||||||  || || ||||||||||||||||||||    
T  37219890 atatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataatc 37219837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 46442110 - 46442050
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  46442110 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 46442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 53123297 - 53123237
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  53123297 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 53123237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 10442586 - 10442646
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  10442586 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10442646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 11314050 - 11314111
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||||  | ||| ||||||||| || |||||||    
T  11314050 aatgctagatatcaagaatgattttatcaagaaagatgcaagaatgacatgacacaataatc 11314111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 266
Target Start/End: Original strand, 17655462 - 17655495
Alignment:
Q  233 aagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| ||||||||||||||||||||    
T  17655462 aagaaaatttcaagaatgacatggcagaataatc 17655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 31078618 - 31078678
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| || |||||| ||| |||||||||||| |||||||    
T  31078618 aatgctagatatcaagaatgattttataaaaaaaatt-caagaatgacatggcacaataatc 31078678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 42671927 - 42671874
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||| |||||||||||||||  ||||| ||||||||| || |||||||    
T  42671927 atatcaagaatgattttatcaagaaagattcaagaatgacatgacataataatc 42671874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 44893012 - 44893072
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  44893012 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 44893692 - 44893632
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  44893692 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 44893632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 32064748 - 32064810
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32064748 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 32064810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 34665385 - 34665447
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34665385 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 34665447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 32393856 - 32393923
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  32393856 atgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 32393923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 17841912 - 17841850
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  17841912 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 17841850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 20091863 - 20091801
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  20091863 caatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 20091801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 24211615 - 24211553
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  24211615 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatggcatggcagaataatc 24211553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 40780191 - 40780129
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  40780191 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 40780129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 42755104 - 42755042
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42755104 caatgatatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 42755042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 15187563 - 15187624
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  15187563 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 15187624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 209 - 266
Target Start/End: Original strand, 38016979 - 38017036
Alignment:
Q  209 ctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  38016979 ctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 38017036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 8453831 - 8453899
Alignment:
Q  198 gatgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || |||||||    
T  8453831 gatgaacaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgacaaaataatc 8453899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 35353039 - 35353106
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  35353039 atgagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 35353106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 1646027 - 1645965
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||    
T  1646027 caatgctatatatcaagaaagattttatcaagaaaattttaagaaagacatggcagaataatc 1645965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 14128867 - 14128929
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  14128867 caatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 14128929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 26042178 - 26042116
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  26042178 caatgctatatattaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 26042116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 37986116 - 37986055
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  37986116 aatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 37986055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 27782179 - 27782117
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||    
T  27782179 caatgctatatatcaagaaatattttatcaagaaagattcaataatgacatggcagaataatc 27782117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 31347844 - 31347782
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  31347844 caatgctatatatcaagaaatattttctcaagaaaaattcaagaatgacatggcagaataatc 31347782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 39772863 - 39772801
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  39772863 caatgttatatatcaagaaatattttatcaaaaaaatttcaagaatgacatggcagaataatc 39772801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 6108295 - 6108233
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||| | |||||||||| || ||||||||||||||||||||    
T  6108295 caatgttatatatcaagaaagatttttttaagaaaattttaagaatgacatggcagaataatc 6108233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 7017927 - 7017865
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||| |||||||||| | ||||||| ||||| ||||||||||||||||||||    
T  7017927 caatgctatatatcatgaaagattttcttaagaaaaattcaagaatgacatggcagaataatc 7017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 37132720 - 37132658
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||| ||| ||||||||||||||| || || ||||||||||||||||||||    
T  37132720 caatgctatatatcaaaaaatattttatcaagaaaaatttaagaatgacatggcagaataatc 37132658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 266
Target Start/End: Complemental strand, 25581299 - 25581239
Alignment:
Q  206 atgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||| |||||  ||||||||||||| |||||||||||| |||||||    
T  25581299 atgctatatatcaagaaagtttttacgaagaaaatttcaagaatgacatggcaaaataatc 25581239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 211 - 266
Target Start/End: Original strand, 7021988 - 7022043
Alignment:
Q  211 atatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||    
T  7021988 atatatcaagaaagattttctcaagaaaaattcaagaatgatatggcagaataatc 7022043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 30835108 - 30835047
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||||||||||||||||||| | |||| ||||| ||||||||||||||||||||    
T  30835108 caatgttatatatcaagaaagattttatcga-aaaaattcaagaatgacatggcagaataatc 30835047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 41819840 - 41819778
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||||||||||||||||||||||||  ||| || ||||| ||||||||||||||    
T  41819840 caatgttatatatcaagaaagattttatcaagaatgttttaagaatgatatggcagaataatc 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 3890413 - 3890474
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||||  ||||| ||||| ||||||||||||||    
T  3890413 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgatatggcagaataatc 3890474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 27835515 - 27835453
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||| |||||| |||| ||||||| ||||| |||||||||| | |||||||    
T  27835515 caatgctatatatcaataaagatcttattaagaaaaattcaagaatgacatggtaaaataatc 27835453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 1503642 - 1503702
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  1503642 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 1503702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 17841649 - 17841709
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  17841649 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 17841709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 26041912 - 26041972
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  26041912 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 40779928 - 40779988
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  40779928 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 40779988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 1886672 - 1886621
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||| |||||||||||||||  ||||| |||||| |||||||||||    
T  1886672 atatcaagaatgattttatcaagaaagattcaagaatgacgtggcagaataa 1886621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 24844919 - 24844869
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatg 255  Q
    ||||||| ||||||||||| ||||||| ||||||| ||||| |||||||||    
T  24844919 aatgctacatatcaagaaatattttattaagaaaaattcaagaatgacatg 24844869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 266
Target Start/End: Complemental strand, 35353300 - 35353247
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  35353300 tatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 3890653 - 3890616
Alignment:
Q  229 tatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  3890653 tatcaagaaaaattcaagaatgacatggcagaataatc 3890616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 10044614 - 10044554
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  10044614 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 10044554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 14129125 - 14129065
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  14129125 aatgctagatatcaagaatgattttat-aagaaatattcaagaatgacatggcacaataatc 14129065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 20091600 - 20091660
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  20091600 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20091660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 30055546 - 30055587
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaa 245  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  30055546 caatgctatataccaaggaagattttatcaaaaaaatttcaa 30055587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 31347575 - 31347635
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  31347575 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 31347635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 34665647 - 34665587
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  34665647 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 34665587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 37132479 - 37132540
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||||  ||||  ||||||||| || |||||||    
T  37132479 aatgctagatatcaagaatgattttatcaagaaagattcatgaatgacatgacacaataatc 37132540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 37985855 - 37985915
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  37985855 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 37985915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 229 - 265
Target Start/End: Complemental strand, 3597078 - 3597042
Alignment:
Q  229 tatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    |||||||||| |||||| |||||||||||||||||||    
T  3597078 tatcaagaaagtttcaagaatgacatggcagaataat 3597042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 5e-25; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 33695389 - 33695327
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33695389 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33695327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 33696699 - 33696761
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33696699 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 33696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 6127278 - 6127340
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  6127278 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 6127340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 18365635 - 18365573
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18365635 caatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18365573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 18370899 - 18370837
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  18370899 caatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 18370837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 23291146 - 23291084
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  23291146 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 23291084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 17176088 - 17176021
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||    
T  17176088 atgagcaatgctatatatcaagaaagattttatcaataaaatttcaagaatgacatgacagaataatc 17176021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 17705527 - 17705465
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||    
T  17705527 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatgacagaataatc 17705465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 25986933 - 25986995
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||    
T  25986933 caatgctatatatcaagaaagattttattaagaaaatttcaagaatgacatggcaaaataatc 25986995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 28675151 - 28675213
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  28675151 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgtcggaataatc 28675213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 265
Target Start/End: Complemental strand, 18889758 - 18889698
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  18889758 caatgctatatatcaagaaagattt-atcaagaaaatttcaagaatgacatggcagaataat 18889698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 266
Target Start/End: Complemental strand, 8515789 - 8515725
Alignment:
Q  202 aacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||| |  || || ||||||||||||||||||||    
T  8515789 aacaatgctatatatcaagaaagattttatcaagacagatttaagaatgacatggcagaataatc 8515725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 207 - 266
Target Start/End: Complemental strand, 11548647 - 11548588
Alignment:
Q  207 tgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  11548647 tgctatatatcaagaaaaattttctcaagaaaaattcaagaatgacatggcagaataatc 11548588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 6031803 - 6031741
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||| ||||| ||||||| || ||||||||| ||||||||||    
T  6031803 caatgctatatatcaagaaagatttcatcaataaaattttaagaatgacatgacagaataatc 6031741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 32702216 - 32702270
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||| ||| ||||||||||| ||||| ||||||||||||||    
T  32702216 tatatcaagaaagattttttcatgaaaatttcaagaatgatatggcagaataatc 32702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 205 - 265
Target Start/End: Complemental strand, 29693712 - 29693652
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    ||||||| |||||||||| |||||||||||||||  || || |||||||||||||||||||    
T  29693712 aatgctagatatcaagaatgattttatcaagaaagatttaagaatgacatggcagaataat 29693652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 2309485 - 2309423
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||||||||||||||||||||| |   ||| || |||| |||||||||||||||    
T  2309485 caatgttatatatcaagaaagattttatcaaaatttttttaagaatggcatggcagaataatc 2309423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 9752306 - 9752245
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||| | || |||||||||| ||||| ||||| ||||||||||||||    
T  9752306 caatgttatatatcaagaaaaaatt-atcaagaaaaattcaagaatgatatggcagaataatc 9752245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 34238886 - 34238946
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||| | ||||| ||||||||| || |||||||    
T  34238886 aatgctagatatcaagaatgattttatcaagaaga-ttcaagaatgacatgacacaataatc 34238946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 5e-25; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 40214991 - 40215053
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40214991 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 40215053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 16045859 - 16045798
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16045859 aatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16045798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 9910360 - 9910293
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  9910360 atgagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 9910293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 44094701 - 44094763
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  44094701 caatgctatatatcaagaaatattttatcaagaaaatttcaagaatgacatggcagaataatc 44094763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 201 - 266
Target Start/End: Original strand, 3559617 - 3559682
Alignment:
Q  201 gaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  3559617 gaacaatgctatatatcaagaaagattttatcaaaaaaattttaagaatgacatggcagaataatc 3559682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 36966775 - 36966708
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  36966775 atgagcaatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 36966708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 18404445 - 18404507
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||| |||||||||    
T  18404445 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggtagaataatc 18404507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 19015407 - 19015469
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  19015407 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 19015469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 25463679 - 25463741
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||||    
T  25463679 caatgctatatatcaagaaagattttatgaagaaaattttaagaatgacatggcagaataatc 25463741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 37821896 - 37821834
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||    
T  37821896 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggcagaataatc 37821834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 6883485 - 6883552
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||||    
T  6883485 atgagcaatgctatatattaagaaagatttttttaagaaaatttcaagaatgacatggcagaataatc 6883552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 41876504 - 41876442
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||| ||||||| || ||||||||||||||||||||    
T  41876504 caatgctatatatcaagaaagattttttcaaaaaaattttaagaatgacatggcagaataatc 41876442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 32000334 - 32000269
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||| ||||||||    
T  32000334 atgagcaatgctatatatcaagaaagattttctcaagaaaaattcaagaatgacatgacagaataa 32000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 25973417 - 25973478
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||    
T  25973417 caatgttatatatcaagaaagattttatcatgaaaatttcaagaatgaca-ggcagaataatc 25973478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 40273705 - 40273767
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||| ||||||||||||||||| ||||||||| ||||| ||||||||| || |||||||    
T  40273705 caatgctagatatcaagaaagattttttcaagaaaaattcaagaatgacatgtcaaaataatc 40273767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 34519761 - 34519823
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||| ||||||  ||||| |||| ||| | |||||||||    
T  34519761 caatgctatatatcaagaaagattttattaagaaagattcaaaaatgccatagaagaataatc 34519823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 19015670 - 19015610
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  19015670 aatgctacatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 19015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 44690828 - 44690881
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| || |||||||||||||||  ||||| ||||||||||||||||||||    
T  44690828 atatcaataatgattttatcaagaaagattcaagaatgacatggcagaataatc 44690881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 51737771 - 51737711
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  51737771 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 51737711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Complemental strand, 6883753 - 6883696
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaata 263  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| ||||    
T  6883753 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcataata 6883696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 51620983 - 51621017
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaa 238  Q
    |||||||||||||||||||||||||||| ||||||    
T  51620983 caatgctatatatcaagaaagattttattaagaaa 51621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 263
Target Start/End: Original strand, 52064376 - 52064434
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaata 263  Q
    ||||||| ||||||| || |||||||||||||||  ||||| ||||||||| |||||||    
T  52064376 aatgctagatatcaaaaatgattttatcaagaaagattcaagaatgacatgacagaata 52064434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 9910098 - 9910150
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  9910098 atatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 9910150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 20304929 - 20304989
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  20304929 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 20304989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 27523319 - 27523255
Alignment:
Q  204 caatgctatata--tcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||  |||||||  ||||||||||||||| || || ||||||||| ||||||||||    
T  27523319 caatgctatatacatcaagaacaattttatcaagaaaaatttaagaatgacatgacagaataatc 27523255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 32000065 - 32000125
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  32000065 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 32000125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 33786430 - 33786490
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  33786430 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 33786695 - 33786635
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  33786695 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 33786635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 40215254 - 40215194
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  40215254 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 40215194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 40273974 - 40273914
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  40273974 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 40273914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 265
Target Start/End: Complemental strand, 44691083 - 44691030
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    |||||||||||||||||||| || |||  ||||| ||| |||||||||||||||    
T  44691083 tatatcaagaaagattttataaaaaaagattcaagaattacatggcagaataat 44691030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 266
Target Start/End: Original strand, 30385007 - 30385076
Alignment:
Q  197 agatgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  30385007 agatgagcaatgctatttatcaagaaagattttatcaagaaaatttcaaaaatgacatggcagaataatc 30385076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 6041882 - 6041949
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  6041882 atgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 6041949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 37217120 - 37217053
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  37217120 atgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37217053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 2754720 - 2754782
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2754720 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2754782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 3574589 - 3574527
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  3574589 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 3574527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 11347271 - 11347332
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  11347271 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataat 11347332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 3456062 - 3456129
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  3456062 atgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 3456129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 48160903 - 48160970
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  48160903 atgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgatatggcagaataatc 48160970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 3137476 - 3137414
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||||||    
T  3137476 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcaaaataatc 3137414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 33113796 - 33113858
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||    
T  33113796 caatgctatatatcaagaaagattttattaagaaaatttcaagaattacatggcagaataatc 33113858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 9797091 - 9797029
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  9797091 caatgttatatatcaagaaagattttctcaagaaaaattcaagaatgacatggcagaataatc 9797029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 19650962 - 19650900
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  19650962 caatgttatatattaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 19650900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 22426406 - 22426344
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  22426406 caatgttatatattaagaaagattttatcaagaaaattttaaaaatgacatggcagaataatc 22426344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 34482972 - 34482910
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||||||    
T  34482972 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgatatggtagaataatc 34482910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 42297356 - 42297407
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatg 255  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  42297356 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatg 42297407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 8320646 - 8320584
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||||| |||||| |||||||    
T  8320646 caatgttatatatcaagaaagattttatcaagaaaattttaagaatgatatggcaaaataatc 8320584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 33145716 - 33145777
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||| || ||||||| || ||||||||||||||||||||    
T  33145716 caatgctatatatcaagaaagattttattaa-aaaattttaagaatgacatggcagaataatc 33145777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 37522056 - 37522118
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||| |||||||||||| || ||||||||| ||||||||||    
T  37522056 caatactatatatcaagaaagattttttcaagaaaattttaagaatgacatgacagaataatc 37522118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 24343550 - 24343612
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||||||||||||| ||||| | | | ||||||||||||||    
T  24343550 caatgctatatattaagaaagattttatcaagaaaaattcaaaattaatatggcagaataatc 24343612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 36865089 - 36865027
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| ||| |||||||||| |||||||||| || |||||||||| |||||||||    
T  36865089 caatgctatatattaaggaagattttattaagaaaattttaagaatgacatggtagaataatc 36865027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 213 - 265
Target Start/End: Original strand, 47738117 - 47738169
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    ||||||||||||||||||||||||||  ||||| ||||| |||||||||||||    
T  47738117 atatcaagaaagattttatcaagaaatattcaagaatgatatggcagaataat 47738169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 8362112 - 8362045
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||| |   | ||||||||| ||||| ||||||||||||||||||||    
T  8362112 atgagcaatgctatatatcaagaaaaaaaatttcaagaaaaattcaagaatgacatggcagaataatc 8362045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 207 - 262
Target Start/End: Original strand, 41224239 - 41224294
Alignment:
Q  207 tgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaat 262  Q
    |||||||||| |||||||||||| ||||||||| ||||| |||||||||| |||||    
T  41224239 tgctatatattaagaaagattttctcaagaaaaattcaagaatgacatggtagaat 41224294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 42921154 - 42921197
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatg 255  Q
    ||||||||||||||||||||||||||||||| || |||||||||    
T  42921154 tatatcaagaaagattttatcaagaaaattttaagaatgacatg 42921197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 26612794 - 26612848
Alignment:
Q  210 tatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||| ||||||||||| || |||| ||||| ||||||||||||||||||    
T  26612794 tatatatcaaaaaagattttataaaaaaaaattcaagaatgacatggcagaataa 26612848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 238
Target Start/End: Original strand, 40327878 - 40327912
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaa 238  Q
    |||||||||||||||||||||||||||||||||||    
T  40327878 caatgctatatatcaagaaagattttatcaagaaa 40327912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 3137213 - 3137273
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  3137213 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 3137273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 34482687 - 34482747
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  34482687 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 34482747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 40328098 - 40328037
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||||  ||||| ||||||||| || |||||||    
T  40328098 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 40328037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 46919153 - 46919100
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||| ||||||||||| |||  ||||| ||||||||||||||||||||    
T  46919153 atatcaagaatgattttatcaaaaaagattcaataatgacatggcagaataatc 46919100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Complemental strand, 47738370 - 47738317
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||| |||||||||||||||  ||||| |||||||||||| |||||||    
T  47738370 atatcaagaatgattttatcaagaaagattcaagaatgacatggcacaataatc 47738317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 266
Target Start/End: Complemental strand, 33839797 - 33839741
Alignment:
Q  210 tatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||||||  ||||| ||||||||| || |||||||    
T  33839797 tatatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 33839741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 33839534 - 33839596
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| ||||||| ||||||||||||||||| |||| || || ||| ||||| ||||||||||    
T  33839534 caatgttatatattaagaaagattttatcaaaaaaaatttaagaataacatgacagaataatc 33839596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 22426144 - 22426204
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  22426144 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 22426204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 30385666 - 30385606
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  30385666 aatgctaaatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 30385606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 33114060 - 33114000
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  33114060 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 33114000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 36864831 - 36864892
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||||||||| |||  ||||| ||||||||| || |||||||    
T  36864831 aatgctagatatcaagaatgattttatcaaaaaagattcaagaatgacatgacacaataatc 36864892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 37522319 - 37522259
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  37522319 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcataataatc 37522259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 41224500 - 41224440
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  41224500 aatgctagatatcaagaatgattt-atcaagaaatattcaagaatgacatggcacaataatc 41224440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 41883260 - 41883223
Alignment:
Q  229 tatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  41883260 tatcaagaaaaattcaagaatgacatggcagaataatc 41883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 232
Target Start/End: Complemental strand, 47402658 - 47402630
Alignment:
Q  204 caatgctatatatcaagaaagattttatc 232  Q
    |||||||||||||||||||||||||||||    
T  47402658 caatgctatatatcaagaaagattttatc 47402630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 11361198 - 11361131
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  11361198 atgagcaatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 11361131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 2477639 - 2477701
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  2477639 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 2477701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 6043573 - 6043511
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  6043573 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatggaagaataatc 6043511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 8145379 - 8145440
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8145379 aatgttatatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8145440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 3362781 - 3362841
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  3362781 caatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 3362841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 264
Target Start/End: Original strand, 12850804 - 12850864
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  12850804 caatgctatatatcaagaaagattttatcaagaaaattccaaaaatgacatggcagaataa 12850864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 38899788 - 38899728
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  38899788 caatgctatatatcaagaaagattttatcaagaaaattccaagaatgacatggcagaataa 38899728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 3522073 - 3522006
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  3522073 atgagcaatgttatatatcaagaaagattttttcaagaaaatttcaaaaatgacatggcagaataatc 3522006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 22913121 - 22913054
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||||    
T  22913121 atgagcaatgctatatatcaagaaagattttttcaagaaaaattcaagaatgacatggcagaataatc 22913054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 33584396 - 33584329
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  33584396 atgagcaatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 33584329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 4892205 - 4892267
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  4892205 caatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4892267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 14138671 - 14138733
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  14138671 caatgttatatatcaagaaagattttatcaagaaaatttcaagaattacatggcagaataatc 14138733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 25398241 - 25398303
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  25398241 caatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 25398303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 4434074 - 4434007
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||||||||    
T  4434074 atgagcaatgctatatatcaagaaagatttttttaagaaaatttcaagaatgatatggcagaataatc 4434007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 37321856 - 37321793
Alignment:
Q  204 caatgctatatatc-aagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  37321856 caatgctatatatctaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 37321793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 17545752 - 17545685
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||| | ||| ||||||||| ||||| ||||||||||||||||||||    
T  17545752 atgagcaatgctatatatcaagaaaaaatttctcaagaaaaattcaagaatgacatggcagaataatc 17545685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 12614795 - 12614733
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||||||||||||  ||||| ||||||||| || |||||||    
T  12614795 caatgctatatatcaagaaatattttatcaagaaagattcaagaatgacatgacataataatc 12614733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 10458409 - 10458462
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||||| |||||||    
T  10458409 atatcaagaaaaattttatcaagaaaaattcaagaatgacatggcaaaataatc 10458462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 25398504 - 25398444
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||| |||||||    
T  25398504 aatgctagatatcaagaatgattttat-aagaaaaattcaacaatgacatggcacaataatc 25398444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 256
Target Start/End: Original strand, 27481830 - 27481881
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatgg 256  Q
    |||||||| ||| |||||||||||||||||||||| ||||| ||||||||||    
T  27481830 aatgctatgtattaagaaagattttatcaagaaaaattcaagaatgacatgg 27481881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 4892468 - 4892408
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  4892468 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 4892408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 33584128 - 33584188
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  33584128 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33584188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 12851068 - 12851010
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||    
T  12851068 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataa 12851010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 38899524 - 38899583
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataa 264  Q
    ||||||| |||||||||| |||||||| || |||| ||||| |||||||||||| |||||    
T  38899524 aatgctagatatcaagaatgattttataaaaaaaaattcaagaatgacatggcacaataa 38899583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 3521806 - 3521866
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  3521806 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 3521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 6043311 - 6043371
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  6043311 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 6043371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 8145639 - 8145579
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||  ||||| |||||||||||| |||||||    
T  8145639 aatgctagatatcaagaatgattttat-aagaaagattcaagaatgacatggcacaataatc 8145579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 22912856 - 22912916
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| ||||| |||||||||  ||||| |||||||||||| |||||||    
T  22912856 aatgctagatatcaagaatgattt-atcaagaaagattcaagaatgacatggcacaataatc 22912916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 21936079 - 21936146
Alignment:
Q  199 atgaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  21936079 atgagcaatgctatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataatc 21936146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 9293638 - 9293576
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  9293638 caatgctatatatcaagaaagattttatcaagaaattttcaagaatgacatggcagaataatc 9293576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 10661890 - 10661952
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  10661890 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 10661952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 23268124 - 23268062
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23268124 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 23268062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 35160760 - 35160822
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  35160760 caatgctatatatcaagaaagattttatcaagaaaattttaagaatgacatggcagaataatc 35160822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 31174899 - 31174834
Alignment:
Q  201 gaacaatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  31174899 gaacaatgttatatatcaagaaagattttattaagaaaatttcaagaatgacatggcagaataatc 31174834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 13354849 - 13354910
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataat 265  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  13354849 caatgttatatatcaagaaagattttatcaagaaaatttcaagaatgatatggcagaataat 13354910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 7475570 - 7475508
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  7475570 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatgatagaataatc 7475508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 14941428 - 14941366
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||| ||||||  ||||| ||||||||||||||||||||    
T  14941428 caatgctatatatcaagaaagattttattaagaaagattcaagaatgacatggcagaataatc 14941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 33380210 - 33380272
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||    
T  33380210 caatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggctgaataatc 33380272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 43330915 - 43330977
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||||||||||    
T  43330915 caatgctatatatcaagaaagattttctcaaaaaaaattcaagaatgacatggcagaataatc 43330977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 21393750 - 21393688
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||| ||||| ||||||||| || || |||||||||| |||||||||    
T  21393750 caatgctatatatcaagaaaaattttctcaagaaaaatttaagaatgacatggtagaataatc 21393688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 9723408 - 9723470
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||| |||||||||||||| ||||||  || || ||||||||| ||||||||||    
T  9723408 caatgctatatattaagaaagattttattaagaaagatttaagaatgacatgacagaataatc 9723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 27847635 - 27847697
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| ||||| |||||||||||||| ||||||  ||||| ||||||||| ||||||||||    
T  27847635 caatgctgtatataaagaaagattttattaagaaagattcaagaatgacatgacagaataatc 27847697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 40262752 - 40262714
Alignment:
Q  200 tgaacaatgctatatatcaagaaagattttatcaagaaa 238  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  40262752 tgaacaatgttatatatcaagaaagattttatcaagaaa 40262714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 213 - 266
Target Start/End: Original strand, 22591494 - 22591547
Alignment:
Q  213 atatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||| || |||| ||||| ||||| ||||||||||||||    
T  22591494 atatcaagaaagattttattaaaaaaaattcaagaatgatatggcagaataatc 22591547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 22592979 - 22592918
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||||||||||  ||||| ||||||||| || |||||||    
T  22592979 aatgctagatatcaagaatgattttatcaagaaagattcaagaatgacatgacacaataatc 22592918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 33380473 - 33380413
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  33380473 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 33380413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 35161025 - 35160965
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  35161025 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 35160965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 266
Target Start/End: Original strand, 3989104 - 3989141
Alignment:
Q  229 tatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||| || ||||||||||||||||||||    
T  3989104 tatcaagaaaattttaagaatgacatggcagaataatc 3989141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 23267861 - 23267921
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| || || |||||||||||| |||||||    
T  23267861 aatgctagatatcaagaatgattttat-aagaaaaatttaagaatgacatggcacaataatc 23267921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 12845 - 12907
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  12845 caatgctatatatcaagaaagattttttcaagaaaatttcaagaatgacatggcagaataatc 12907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 11624 - 11686
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  11624 caatgctatatatcaagaaagattttatcaagaaaatttcaagaatgacatgacagaataatc 11686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 41014 - 41076
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41014 caatgctatatatcaagaaagattttatcaaaaaaatttcaagaatgacatggcagaataatc 41076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 47853 - 47915
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  47853 caatgctatttatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 47915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 3071 - 3133
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||    
T  3071 caatgctatatatcaagaaagattttatcaataaaattttaagaatgacatggcagaataatc 3133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 8413 - 8467
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8413 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 8467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 15995 - 16049
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15995 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 16049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 212 - 266
Target Start/End: Original strand, 25947 - 26001
Alignment:
Q  212 tatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  25947 tatatcaagaaagattttatcaagaaaatttcaagaatgacatggcagaataatc 26001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 16250 - 16190
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  16250 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 16190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 266
Target Start/End: Complemental strand, 26202 - 26142
Alignment:
Q  205 aatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    ||||||| |||||||||| |||||||| ||||||| ||||| |||||||||||| |||||||    
T  26202 aatgctagatatcaagaatgattttat-aagaaaaattcaagaatgacatggcacaataatc 26142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0204 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 4399 - 4461
Alignment:
Q  204 caatgctatatatcaagaaagattttatcaagaaaatttcaacaatgacatggcagaataatc 266  Q
    |||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||    
T  4399 caatgctatatatcaagaaagattttttcaagaaaattttaagaatgacatggcagaataatc 4461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University